CmoCh13G005550 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GCGAAAGGCGAAGGGGGAGGTAGAACTGTAAATGACCTGAAGGAACAAAATTTTGGAATTCATGGCTGTTCTTGCCTCTATCCATCCCATCGCCCTCCTTCGACCCAAAATTCCTACTCCAAAACCCACCTTCAGGCCAAATGCCCAGCTCCTTAGACCCCATAAAATGCGAGTACCCTTCAAGCTGAAGGACCAACAGAACCGCATCTTCCATGAACTCCCCTCTGGTCTTCAAATGGAGGTAATTGTGCAAAAGGGTTCCGCGAAATCGGCCGAATCAATGGCTGCAAATGTGGAACGCCCACCTCTGCTCTTTGTCCATGGAAGCTACCACGCTGCTTGGTCTTGGGCAGAACACTGGCTGCCATTCTTTTCGGCTTCTGGGTTCGATTGCTATGCCATCAGCTTGTTGGGTCAGGTGGGTTTCCCTCGATTCCATTCTTTTTTGCTAAAATGCTAGAATTTTGAGATATTTAGGGATTTGATTGCTTTCTCAGTTCATGCCCAATTGCTGATTCTATGTATAAATTGCCTTAAACTATTTACATTCAATCATATTTCTTTCTTGATATGAATTGTCAGGGTGAAAGTGATGCACCATCTGCATCGGTTGCTGGTACTCTCCAGGTAATTTAGCTATCTATCTACCTGAAAGTTTCTCTGTTTTTTTGGATGTATTGGTGGTGTTCTTATTTCTTCCTCATTCCAAATTTTGTAGTAGACACATGCGAGTGATATTGCTGACTTCATTCATACAAGTTTTAGTATACCACCAGTGTTGCTTGGGCACTCATTTGGAGGTCTTATTGTACAATATTACATAGCAAACAGCAAATATGATGATTTTTCAGGTAGCTCCTTTTCATCAATCTTCTCTTCACAAAAGTGAAGCAGGTTCTAATTCATAGTTGAATTGGTTTAGTAAAATGTGGAGATTTTATCTATCTACCAGTTTAAATTATATGGCCTTATGTAACGAGGTCAAATATTTCTGTGAGATCCCACATCGATTGGAGAGGAGAACGAAGCATTCTTTTTAAGGGTGTAGAAACCTCTCCTTAGAAGACGCATTTTTAAAAACCTTGAGGAGATCTCGAAAGGGAAAGCCCAAAGAGGACAATATCTGCAAACAAGGACTAACGAGGATGCTGAGCCCCGAAGAAGGGTGGATTATGAGATCCCACATCGATTGGAGAGGAGAACGAGTGTCAGCGTCTCGAAGGGGGTGGATTGTGAGCTCCCACATCGGTTGGAGAAGGGGAACAAAACATTCTTTATAAGATGTGAAAATCTCTCCCTAGCAAGCGCGTTTTAAAAACCTTGAGGGGAAGCTCAGGAGAGAAAGCCTAAAGAAGACAATATCTGTTAGTGGTGGGCTTACGTTAATTTCATATCTTATACTAAGAATACATTACAGCTTGCAATTGTCAAGGCTCAATTATTTTATACATATATGATTTCATACATAATGCATGATCTAGATCCAGAAAGATTGTTCCCAAGGCTTACTGGAGCTGTTCTTGTCTGTTCTGTACCTCCTTCCGGCAACAGGTACATCCATACTGCTCAGTTCAAAATCATTACTTCATGAACATAATCGACCTAACTCGGTATTTTCTTCGCTTCTCCAGTGGACTCGTAAAGCGCTATCTCTTTACCAAACCCATTGCTGCTTTTAAGGTACTTCCTCATGAATTTGAGACATAATAATTAGTGCTGGGTGGCTTCTGCATCTTTTTTTATGAGTCTATCGACTGTTCTTGGTTCATTGGGTATGTCATAAGTAGACACATGCTATGCCTTTGGTAGTGCCTTCTATTTCTCGAGCTCAAATCTGTTCGATATAGGCATTCCACTGAAAGCATCGTTCAAAGAGGGGAACGAAACATTCCTTATAAGTGTGTGGAAATCTCTCCCTAGCAGACGCGTTTAAAACCGTGAGGCTGACGACAACACATAACGGGCCAAAACAGACAATATCTGCTAGCAGTAGGCTTAGACGGTTACAAACGAACATGACATACTTTTACTAAATCTTAAATGCTCCTACATATTTTAGCAATTCATGACTATCTTGTTTCACTTTGAGTAGGTGACACTCAGTTTGGCAGCAAAGGCTTTTCAAACATCTCTTCCTCTTTGCAAGGAGACATTTTTCTCTGCAACAATGGAGGATCGTCTTGTTTCACGGTTCGTATAGTTTGAAATACCTCAAGTTAATTTAGTTGTTGCGATCATTGTTCGGTTTCCAGTCCATAAATGCATTGGAAATTTGATAGCTAAGTTGGATAAGAAAAGTTATGGAATTATCGTAAGAAGAGTGATGTAACATTTGTGAGATTCCACATCGGTTGAAGAAAGGAACGAATCATTCTTTATAAGGATGTGGAAACCTCTCTCTAGCAGACGCGTTTTATAAACCTTGAGGGGAAGCCCGAAAGGAAAAGCCCAAAGAGGACAATATCCGTTAGCGGTGAGCTTGGACTGTTACTCGAGTTAGAACGCATGACGAAGTATTTGCATTCCATGCTTAAATGTTAGTCTATAATCTGCTTCAAAATCTCTAAACTTCCTTTTCAGATATCAAGAGTTGATGAAAGAAAGCTCAAGGATGCCATTATTTGATCTAAGGAAGCTGAACGCATCCCTTCCAGTACCATCACTGCCCAAATCATGCATGGAAGTACTAGTGCTTGGTGCAAGTGATGATTTCATTGTGGTATTCATTTATTTTTAAGAACTGGAATCAAAATTGTTCTGCAACAAATTGTTTAAACTTGAGCTCCTTTTGTAATGGATGAACACTGCTGGTTGTTCTTGTGTAGGATGATGAAGGATTGAATGAAACAGGCAGGTTTTACAGTGTGACACCAATCTGTATACAAGGAGTTGCTCATGACATGATGTTGGATTGTTCTTGGCAAAAAGGTGCAGATGCTATCTTAACATGGCTTAATTGCTTAGGATCATAAACATCATCTACCTTCCAATTTTGTTATCTATATTCTCCTCTCCTCTTTCGAGATCGTATCGAACCTTTTGGATCTGTTCAATATCGGTGTTTTATATGTGAGTTTCTCCATACTTGAACCATTCTATAACTTGATTATGTAGAGGCTATGTGTAACCGTCTATGTCTACGATTAGTCGATATTGTTCTCTTTGGGC GCGAAAGGCGAAGGGGGAGGTAGAACTGTAAATGACCTGAAGGAACAAAATTTTGGAATTCATGGCTGTTCTTGCCTCTATCCATCCCATCGCCCTCCTTCGACCCAAAATTCCTACTCCAAAACCCACCTTCAGGCCAAATGCCCAGCTCCTTAGACCCCATAAAATGCGAGTACCCTTCAAGCTGAAGGACCAACAGAACCGCATCTTCCATGAACTCCCCTCTGGTCTTCAAATGGAGGTAATTGTGCAAAAGGGTTCCGCGAAATCGGCCGAATCAATGGCTGCAAATGTGGAACGCCCACCTCTGCTCTTTGTCCATGGAAGCTACCACGCTGCTTGGTCTTGGGCAGAACACTGGCTGCCATTCTTTTCGGCTTCTGGGTTCGATTGCTATGCCATCAGCTTGTTGGGTCAGGGTGAAAGTGATGCACCATCTGCATCGGTTGCTGGTACTCTCCAGACACATGCGAGTGATATTGCTGACTTCATTCATACAAGTTTTAGTATACCACCAGTGTTGCTTGGGCACTCATTTGGAGGTCTTATTGTACAATATTACATAGCAAACAGCAAATATGATGATTTTTCAGATCCAGAAAGATTGTTCCCAAGGCTTACTGGAGCTGTTCTTGTCTGTTCTGTACCTCCTTCCGGCAACAGTGGACTCGTAAAGCGCTATCTCTTTACCAAACCCATTGCTGCTTTTAAGGTGACACTCAGTTTGGCAGCAAAGGCTTTTCAAACATCTCTTCCTCTTTGCAAGGAGACATTTTTCTCTGCAACAATGGAGGATCGTCTTGTTTCACGATATCAAGAGTTGATGAAAGAAAGCTCAAGGATGCCATTATTTGATCTAAGGAAGCTGAACGCATCCCTTCCAGTACCATCACTGCCCAAATCATGCATGGAAGTACTAGTGCTTGGTGCAAGTGATGATTTCATTGTGGATGATGAAGGATTGAATGAAACAGGCAGGTTTTACAGTGTGACACCAATCTGTATACAAGGAGTTGCTCATGACATGATGTTGGATTGTTCTTGGCAAAAAGGTGCAGATGCTATCTTAACATGGCTTAATTGCTTAGGATCATAAACATCATCTACCTTCCAATTTTGTTATCTATATTCTCCTCTCCTCTTTCGAGATCGTATCGAACCTTTTGGATCTGTTCAATATCGGTGTTTTATATGTGAGTTTCTCCATACTTGAACCATTCTATAACTTGATTATGTAGAGGCTATGTGTAACCGTCTATGTCTACGATTAGTCGATATTGTTCTCTTTGGGC ATGGCTGTTCTTGCCTCTATCCATCCCATCGCCCTCCTTCGACCCAAAATTCCTACTCCAAAACCCACCTTCAGGCCAAATGCCCAGCTCCTTAGACCCCATAAAATGCGAGTACCCTTCAAGCTGAAGGACCAACAGAACCGCATCTTCCATGAACTCCCCTCTGGTCTTCAAATGGAGGTAATTGTGCAAAAGGGTTCCGCGAAATCGGCCGAATCAATGGCTGCAAATGTGGAACGCCCACCTCTGCTCTTTGTCCATGGAAGCTACCACGCTGCTTGGTCTTGGGCAGAACACTGGCTGCCATTCTTTTCGGCTTCTGGGTTCGATTGCTATGCCATCAGCTTGTTGGGTCAGGGTGAAAGTGATGCACCATCTGCATCGGTTGCTGGTACTCTCCAGACACATGCGAGTGATATTGCTGACTTCATTCATACAAGTTTTAGTATACCACCAGTGTTGCTTGGGCACTCATTTGGAGGTCTTATTGTACAATATTACATAGCAAACAGCAAATATGATGATTTTTCAGATCCAGAAAGATTGTTCCCAAGGCTTACTGGAGCTGTTCTTGTCTGTTCTGTACCTCCTTCCGGCAACAGTGGACTCGTAAAGCGCTATCTCTTTACCAAACCCATTGCTGCTTTTAAGGTGACACTCAGTTTGGCAGCAAAGGCTTTTCAAACATCTCTTCCTCTTTGCAAGGAGACATTTTTCTCTGCAACAATGGAGGATCGTCTTGTTTCACGATATCAAGAGTTGATGAAAGAAAGCTCAAGGATGCCATTATTTGATCTAAGGAAGCTGAACGCATCCCTTCCAGTACCATCACTGCCCAAATCATGCATGGAAGTACTAGTGCTTGGTGCAAGTGATGATTTCATTGTGGATGATGAAGGATTGAATGAAACAGGCAGGTTTTACAGTGTGACACCAATCTGTATACAAGGAGTTGCTCATGACATGATGTTGGATTGTTCTTGGCAAAAAGGTGCAGATGCTATCTTAACATGGCTTAATTGCTTAGGATCATAA
BLAST of CmoCh13G005550 vs. TrEMBL
Match: A0A0A0M026_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G435710 PE=4 SV=1) HSP 1 Score: 610.1 bits (1572), Expect = 1.6e-171 Identity = 298/343 (86.88%), Postives = 320/343 (93.29%), Query Frame = 1
BLAST of CmoCh13G005550 vs. TrEMBL
Match: M5WWG9_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa020937mg PE=4 SV=1) HSP 1 Score: 506.5 bits (1303), Expect = 2.5e-140 Identity = 251/349 (71.92%), Postives = 284/349 (81.38%), Query Frame = 1
BLAST of CmoCh13G005550 vs. TrEMBL
Match: A0A067KA10_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_12988 PE=4 SV=1) HSP 1 Score: 481.9 bits (1239), Expect = 6.6e-133 Identity = 232/333 (69.67%), Postives = 274/333 (82.28%), Query Frame = 1
BLAST of CmoCh13G005550 vs. TrEMBL
Match: D7TT22_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_14s0006g02840 PE=4 SV=1) HSP 1 Score: 479.6 bits (1233), Expect = 3.3e-132 Identity = 240/342 (70.18%), Postives = 276/342 (80.70%), Query Frame = 1
BLAST of CmoCh13G005550 vs. TrEMBL
Match: A0A061EGT6_THECC (Alpha/beta-Hydrolases superfamily protein OS=Theobroma cacao GN=TCM_019442 PE=4 SV=1) HSP 1 Score: 477.6 bits (1228), Expect = 1.2e-131 Identity = 247/342 (72.22%), Postives = 277/342 (80.99%), Query Frame = 1
BLAST of CmoCh13G005550 vs. TAIR10
Match: AT5G38360.1 (AT5G38360.1 alpha/beta-Hydrolases superfamily protein) HSP 1 Score: 290.8 bits (743), Expect = 1.1e-78 Identity = 150/237 (63.29%), Postives = 175/237 (73.84%), Query Frame = 1
BLAST of CmoCh13G005550 vs. NCBI nr
Match: gi|659068441|ref|XP_008444432.1| (PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103487757 [Cucumis melo]) HSP 1 Score: 615.9 bits (1587), Expect = 4.2e-173 Identity = 302/344 (87.79%), Postives = 324/344 (94.19%), Query Frame = 1
BLAST of CmoCh13G005550 vs. NCBI nr
Match: gi|449463909|ref|XP_004149673.1| (PREDICTED: uncharacterized protein LOC101204886 [Cucumis sativus]) HSP 1 Score: 610.1 bits (1572), Expect = 2.3e-171 Identity = 298/343 (86.88%), Postives = 320/343 (93.29%), Query Frame = 1
BLAST of CmoCh13G005550 vs. NCBI nr
Match: gi|1009128630|ref|XP_015881335.1| (PREDICTED: uncharacterized protein LOC107417246 isoform X1 [Ziziphus jujuba]) HSP 1 Score: 508.1 bits (1307), Expect = 1.2e-140 Identity = 250/343 (72.89%), Postives = 283/343 (82.51%), Query Frame = 1
BLAST of CmoCh13G005550 vs. NCBI nr
Match: gi|595950786|ref|XP_007216377.1| (hypothetical protein PRUPE_ppa020937mg [Prunus persica]) HSP 1 Score: 506.5 bits (1303), Expect = 3.6e-140 Identity = 251/349 (71.92%), Postives = 284/349 (81.38%), Query Frame = 1
BLAST of CmoCh13G005550 vs. NCBI nr
Match: gi|694430347|ref|XP_009342660.1| (PREDICTED: uncharacterized protein LOC103934626 [Pyrus x bretschneideri]) HSP 1 Score: 503.4 bits (1295), Expect = 3.0e-139 Identity = 249/344 (72.38%), Postives = 283/344 (82.27%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |