CmaCh13G005270 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GCAATTGCGCAAGGCAAAGTGGAAGGTAGAACTGTAGATGACCTGAAGGAACTAAATTTTGGAATTCATGGCTGTTCTTGCCTCTATCCATCCCATCTCCCTCCTTCGACCCAAAATTCCTACTCCAAAACCCACCTTCAGGCCAAATGCCCAGCTCCTTAGACCCCATAAAATGCGAGGACCCTTCAAGCTGAAGGATGAACAGAACCGCATTTTCCATGAACTCCCCTCTGGTCTTCAAATGGAGGTGATTGTGCAAAAGGGTTCCGCGAAATCGGCCGAATCAAGGGCTGCAAATGTGGAACGCCCACCTCTGCTCTTTGTCCATGGAAGCTACCACGCTGCTTGGTCTTGGGCAGAACACTGGCTGCCATTCTTTTCGGCTTCTGGGTTCGATTGCTATGCCATCAGCTTGTTGGGTCAGGTGGGTTTCCCTCGATTCCATTCTTTTTGCCAAAATGCTAGAATTTTGAGATATTTAGGGATTTGATTAGCATTCCTAAGAATTGGGATTTGGATGGCTATCTCAGTTCATGCCTAATTGTTGATTCTATGTATAAATTGCATCTTAATGTGCATAAAATTGCTGTTGTGAGCTATAAAAAGACTGCTGAACTGTTTACATCCAATCAGGGTGAAAGTGATGCACCATCTGCATCGGTGGCTGGTACTCTCCAGGTAAGTTAGCTATCTATCTACCTGAAAGTTTCTCTGTTTTTTGGATGTATTGGTGGTGTTCTTATTTCTTCCTCATTCCAAATTTTGTAGTAGACACATGCGAGTGATATTGCTGACTTCATTCATACAAGTTTTAGTATACCACCAGTGTTGCTTGGGCACTCATTTGGAGGTCTTATTGTACAATATTACATAGCAAACAGCAAATATGATGATTTTTCAGGTAGCTCGTTTTCATCGATCTTTTCTTGACAAAAATGAAGCAAGTTCTAATTCCTAATTGAATTAGTTTAGATTATATGGTTTTATGCAACGAGTGAGATCCCACATCGATTCGAGAGGGGAACAAAGCATTTTTTATAAGGTGTAGACCTCTCCTTAGCAGACGCATTTTAAAAACCTTGAGAGGATGCTCGAAAGGGAAAGCCCAAAGAGGACAATATCTGCTTAGTGGTGTGCCAGCAAGGGAGTTGGGCTCCGAAAGAGGGTGGATTGTGGATCTCACATCGATTGGAGAGGGGAACGAGTGTCAGCGTCTCAAAGGGGGGTAGATTGTGAGATTCTACATTGGTTGGGGAGAGAAATGAAACCTTCTTTGTAAGGTGTGAAAACCTCTCCTTCGCAAACGCGTTTTAAAAACTTTGAGGGGAAGCTCGGAAGGGAAAGCCCAAAGAAGACAATACCTATTAACGGTGGGCTTGGACGGTTACAATTTCTTACCGTGATTTCATATCTTATACTACGAATCCATTACCACTTGCAATTGTCAAGGCTCAATTATTTTATACATATATGATTTCATACATAATGCATGATCTTGATACAGAAAGATTGTTCCCAAGGCTTACTGGAGCTGTTCTTGTCTGTTCTGTACCTCCTTCCGGCAACAGGTACATCCATACTGCTCAGTTCAAAATCATTTCTTCATGAACATAATCGACCTAACTCGGTATTTTCTTCTCTTCTCCAGTGGACTCGTAAAGCGCTATCTCTTTACCAAACCCATTGCTGCTTTTAAGGTACTTCCTCAGAATTTGAGACATAATAATTAGTGCTGGGTGGCTTCTGCATCTTTTTTTATGAGTCTATTGACTGTTCTTGGTTCATTGGGTATGTCATAAGTAGACACATACTATGCCTTTGGTAGTGCCTTCTATTGCTCCACCTCAAATCTGTTCAATATAGGCATTCCACTGATAGCATTAGCGATGTGAGATCCCACATCGGTTGGAAAGGGGAACGAAGCTTTCCTTATAAGGGTGTAGAAATCTCTCCCTAACAAATGCGTTTTAAAATCGTGAGGCTAACGGCAATACATAAGGGCCAAAGCAGACAATATCTGCTAGCTGTGGGCTTAGACGGTTACAAACGAACATGACATACTTTTACTAAATTTTAAATTCTCCCACATATTTTAGCGATTCATGGCTATCTTGTTTCACTTTGAGTAGGTGACACTCAGTTTGGCAGTAAAGGCTTTTCAAACATCTCTTCCTCTTTGCAAGGAGACATTTTTCTCTGCAACAATGGAGGATCGTCTTGTTTCACGGTTCGTATACTTTGAAATACCTCAAGTTAATTTAGTTGTTGCGTTCATCATTAGGTTTCTAGTCCATAAATGCATTGAAAATTCTATAGCTAAGTTGGATAAGAAAAAGTTATAGAATTATCGTAAGAAAACAACGAATTCCTTATTCGCCAGGGGGAGAAGAGTGATGTAACATTTCTGAGATTCCACATCGGTTGGAGAAAGGAACGAATCATTATTTATAAGAATGTGGAAACCTCTCCCTAGCAGACGCGTTTTATAAACTTTGAGGGGAAGCCCGAAAGAAAAAGCTCAAAGAGGACAATATCTAGTAGCAGTGGGCTTGGACCGTTACTCGAGTTAGAACGCACGACAAAGTATTGGCATTCCATGGTTTAAATGTTAGTCTATAATCTGCTTCAAAATCTCTAAACCTCCTTTTCAGATATCAAGAGTTGATGAAAGAAAGCTCAAGGATGCCATTATTTGATCTAAGGAAGCTGAACGCATCCCTTCCAGTACCATCACTGCCCAAATCATGCATGGAAGTACTAGTGCTTGGTGCAAGTGATGATTTCATTGTGGTATTCAATTATTTTCATGTTAACTCATCTTCATGGCCAGGAATGATTTTGTGTTGTTCAAGCATAGTTTTTAAGAACTGGAATCAAAATTGTTCTGCAACAAATTGTTTAAACTTGAGCTCCTTTTGTAATGGATGAACACTGCTGTTTGTTCTTGTGTAGGATGCTGAAGGATTGAATGAAACAGGCAGGTTTTACAGTGTGACACCAATCTGTATACAAGGAGTTGCTCATGACATGATGTTGGATTGTTCTTGGCAAAAAGGTGCAGATGCTATCTTAACATGGCTTAATTGCTTAGGATCATAAACATCATCTACCTTCCAATTTTGTTATCTATATTCTCCTCTCCTCTTTCGAGATCGTATCGAACTTTTTGGATCTGTTCAATATCGGTATTTTATATGTGAGTTTCTCCGTACTTGAACCATTCTCTAACTTGATTATGTAGAGGCTATGTGTAACAGTCTATGTCTACTACTAGCCGATATTGTTCTCTCTACGCTTTTTCTTTCGAGTTTTCTCTCAAGGTTTTTAAAACGCGTCTGTTATGGAG GCAATTGCGCAAGGCAAAGTGGAAGGTAGAACTGTAGATGACCTGAAGGAACTAAATTTTGGAATTCATGGCTGTTCTTGCCTCTATCCATCCCATCTCCCTCCTTCGACCCAAAATTCCTACTCCAAAACCCACCTTCAGGCCAAATGCCCAGCTCCTTAGACCCCATAAAATGCGAGGACCCTTCAAGCTGAAGGATGAACAGAACCGCATTTTCCATGAACTCCCCTCTGGTCTTCAAATGGAGGTGATTGTGCAAAAGGGTTCCGCGAAATCGGCCGAATCAAGGGCTGCAAATGTGGAACGCCCACCTCTGCTCTTTGTCCATGGAAGCTACCACGCTGCTTGGTCTTGGGCAGAACACTGGCTGCCATTCTTTTCGGCTTCTGGGTTCGATTGCTATGCCATCAGCTTGTTGGGTCAGGGTGAAAGTGATGCACCATCTGCATCGGTGGCTGGTACTCTCCAGACACATGCGAGTGATATTGCTGACTTCATTCATACAAGTTTTAGTATACCACCAGTGTTGCTTGGGCACTCATTTGGAGGTCTTATTGTACAATATTACATAGCAAACAGCAAATATGATGATTTTTCAGAAAGATTGTTCCCAAGGCTTACTGGAGCTGTTCTTGTCTGTTCTGTACCTCCTTCCGGCAACAGTGGACTCGTAAAGCGCTATCTCTTTACCAAACCCATTGCTGCTTTTAAGGTGACACTCAGTTTGGCAGTAAAGGCTTTTCAAACATCTCTTCCTCTTTGCAAGGAGACATTTTTCTCTGCAACAATGGAGGATCGTCTTGTTTCACGATATCAAGAGTTGATGAAAGAAAGCTCAAGGATGCCATTATTTGATCTAAGGAAGCTGAACGCATCCCTTCCAGTACCATCACTGCCCAAATCATGCATGGAAGTACTAGTGCTTGGTGCAAGTGATGATTTCATTGTGGATGCTGAAGGATTGAATGAAACAGGCAGGTTTTACAGTGTGACACCAATCTGTATACAAGGAGTTGCTCATGACATGATGTTGGATTGTTCTTGGCAAAAAGGTGCAGATGCTATCTTAACATGGCTTAATTGCTTAGGATCATAAACATCATCTACCTTCCAATTTTGTTATCTATATTCTCCTCTCCTCTTTCGAGATCGTATCGAACTTTTTGGATCTGTTCAATATCGGTATTTTATATGTGAGTTTCTCCGTACTTGAACCATTCTCTAACTTGATTATGTAGAGGCTATGTGTAACAGTCTATGTCTACTACTAGCCGATATTGTTCTCTCTACGCTTTTTCTTTCGAGTTTTCTCTCAAGGTTTTTAAAACGCGTCTGTTATGGAG ATGGCTGTTCTTGCCTCTATCCATCCCATCTCCCTCCTTCGACCCAAAATTCCTACTCCAAAACCCACCTTCAGGCCAAATGCCCAGCTCCTTAGACCCCATAAAATGCGAGGACCCTTCAAGCTGAAGGATGAACAGAACCGCATTTTCCATGAACTCCCCTCTGGTCTTCAAATGGAGGTGATTGTGCAAAAGGGTTCCGCGAAATCGGCCGAATCAAGGGCTGCAAATGTGGAACGCCCACCTCTGCTCTTTGTCCATGGAAGCTACCACGCTGCTTGGTCTTGGGCAGAACACTGGCTGCCATTCTTTTCGGCTTCTGGGTTCGATTGCTATGCCATCAGCTTGTTGGGTCAGGGTGAAAGTGATGCACCATCTGCATCGGTGGCTGGTACTCTCCAGACACATGCGAGTGATATTGCTGACTTCATTCATACAAGTTTTAGTATACCACCAGTGTTGCTTGGGCACTCATTTGGAGGTCTTATTGTACAATATTACATAGCAAACAGCAAATATGATGATTTTTCAGAAAGATTGTTCCCAAGGCTTACTGGAGCTGTTCTTGTCTGTTCTGTACCTCCTTCCGGCAACAGTGGACTCGTAAAGCGCTATCTCTTTACCAAACCCATTGCTGCTTTTAAGGTGACACTCAGTTTGGCAGTAAAGGCTTTTCAAACATCTCTTCCTCTTTGCAAGGAGACATTTTTCTCTGCAACAATGGAGGATCGTCTTGTTTCACGATATCAAGAGTTGATGAAAGAAAGCTCAAGGATGCCATTATTTGATCTAAGGAAGCTGAACGCATCCCTTCCAGTACCATCACTGCCCAAATCATGCATGGAAGTACTAGTGCTTGGTGCAAGTGATGATTTCATTGTGGATGCTGAAGGATTGAATGAAACAGGCAGGTTTTACAGTGTGACACCAATCTGTATACAAGGAGTTGCTCATGACATGATGTTGGATTGTTCTTGGCAAAAAGGTGCAGATGCTATCTTAACATGGCTTAATTGCTTAGGATCATAA MAVLASIHPISLLRPKIPTPKPTFRPNAQLLRPHKMRGPFKLKDEQNRIFHELPSGLQMEVIVQKGSAKSAESRAANVERPPLLFVHGSYHAAWSWAEHWLPFFSASGFDCYAISLLGQGESDAPSASVAGTLQTHASDIADFIHTSFSIPPVLLGHSFGGLIVQYYIANSKYDDFSERLFPRLTGAVLVCSVPPSGNSGLVKRYLFTKPIAAFKVTLSLAVKAFQTSLPLCKETFFSATMEDRLVSRYQELMKESSRMPLFDLRKLNASLPVPSLPKSCMEVLVLGASDDFIVDAEGLNETGRFYSVTPICIQGVAHDMMLDCSWQKGADAILTWLNCLGS
BLAST of CmaCh13G005270 vs. TrEMBL
Match: A0A0A0M026_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G435710 PE=4 SV=1) HSP 1 Score: 602.4 bits (1552), Expect = 3.3e-169 Identity = 297/343 (86.59%), Postives = 317/343 (92.42%), Query Frame = 1
BLAST of CmaCh13G005270 vs. TrEMBL
Match: M5WWG9_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa020937mg PE=4 SV=1) HSP 1 Score: 503.4 bits (1295), Expect = 2.1e-139 Identity = 251/349 (71.92%), Postives = 284/349 (81.38%), Query Frame = 1
BLAST of CmaCh13G005270 vs. TrEMBL
Match: A0A067KA10_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_12988 PE=4 SV=1) HSP 1 Score: 479.2 bits (1232), Expect = 4.3e-132 Identity = 233/333 (69.97%), Postives = 273/333 (81.98%), Query Frame = 1
BLAST of CmaCh13G005270 vs. TrEMBL
Match: D7TT22_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_14s0006g02840 PE=4 SV=1) HSP 1 Score: 476.1 bits (1224), Expect = 3.6e-131 Identity = 240/342 (70.18%), Postives = 275/342 (80.41%), Query Frame = 1
BLAST of CmaCh13G005270 vs. TrEMBL
Match: B9H301_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0004s09840g PE=4 SV=2) HSP 1 Score: 473.8 bits (1218), Expect = 1.8e-130 Identity = 239/343 (69.68%), Postives = 273/343 (79.59%), Query Frame = 1
BLAST of CmaCh13G005270 vs. TAIR10
Match: AT5G38360.1 (AT5G38360.1 alpha/beta-Hydrolases superfamily protein) HSP 1 Score: 287.7 bits (735), Expect = 9.2e-78 Identity = 152/237 (64.14%), Postives = 177/237 (74.68%), Query Frame = 1
BLAST of CmaCh13G005270 vs. NCBI nr
Match: gi|659068441|ref|XP_008444432.1| (PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103487757 [Cucumis melo]) HSP 1 Score: 607.1 bits (1564), Expect = 1.9e-170 Identity = 301/344 (87.50%), Postives = 320/344 (93.02%), Query Frame = 1
BLAST of CmaCh13G005270 vs. NCBI nr
Match: gi|449463909|ref|XP_004149673.1| (PREDICTED: uncharacterized protein LOC101204886 [Cucumis sativus]) HSP 1 Score: 602.4 bits (1552), Expect = 4.8e-169 Identity = 297/343 (86.59%), Postives = 317/343 (92.42%), Query Frame = 1
BLAST of CmaCh13G005270 vs. NCBI nr
Match: gi|595950786|ref|XP_007216377.1| (hypothetical protein PRUPE_ppa020937mg [Prunus persica]) HSP 1 Score: 503.4 bits (1295), Expect = 3.0e-139 Identity = 251/349 (71.92%), Postives = 284/349 (81.38%), Query Frame = 1
BLAST of CmaCh13G005270 vs. NCBI nr
Match: gi|1009128630|ref|XP_015881335.1| (PREDICTED: uncharacterized protein LOC107417246 isoform X1 [Ziziphus jujuba]) HSP 1 Score: 501.9 bits (1291), Expect = 8.8e-139 Identity = 248/343 (72.30%), Postives = 280/343 (81.63%), Query Frame = 1
BLAST of CmaCh13G005270 vs. NCBI nr
Match: gi|694430347|ref|XP_009342660.1| (PREDICTED: uncharacterized protein LOC103934626 [Pyrus x bretschneideri]) HSP 1 Score: 498.4 bits (1282), Expect = 9.7e-138 Identity = 248/344 (72.09%), Postives = 283/344 (82.27%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |