CmoCh13G003010 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh13G003010
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	structural constituent of ribosome;protein binding
Location	Cmo_Chr13 : 3259731 .. 3263244 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGAAGAAGAGAGATCCTTTTTTGAACAGGAAAATTTGGTCACGTAGATCTTCGATTTTGCCAGAATTCGTTGATAGCTCCATACGAATTTACAATGGAAAAACTTCTGTTCGTTGTAAGATCACTGAAGGAAGGGTTGGTCATAAATTTGGAGAGTTTGCTTCGACACGGAAACGAAGACTTTCGAGAACAAATATTGGACCGGGAAAAAAAGGGGAGAAAGTCAAGGCGCATATGGCACGAAAAGGAAATCCAATTTTGGTAAGACTTGATCTGAATCGTAGTTCAGATTCAAGTTGGTTCAGTGAGGGCGACCGCGAAAGTCACCGAATAGGTCAGTCTTTTCCTTTTGTCCTATATTGAAAATCAACAAAGCGTGGGAGGACATTGCACAGATGTCCAGGACGGACACGACTTCTTCTAACGCTAGAAGACCACTAGAAGACACCCGGGACCAGAGCATGTCGTGAAAGAAGCACACTGGCCGTGCTTCGACCGTGTCTCCGGGACACAGTTGAATGTAGATATCATGAATGCGAGGTGCAGGATACCAGGCCGAGAAACCCGGGCAACCACTACCCTATGTGCTGATCGTTAGCACATCCAGGGCCCCGGTGCCCGGCAGAGCTGGAGAGGCCTAGCTGGATCTGAGAAGTGCTAATTCGGTTCGTCACGACTTCATTCAAGAACAAACACCCTGGAATCCATAAGAAAACAAGTGCTATCAGATCAGTGAATAAACCCAAACGCAGTGAATAAACCCAAATGCAAAGAAGAAAGAGAACTTTCTCGCTCGGTGCCTAAAGCGCACTATTCTCCCCTTCAACAAATGAGAGTTTTCGGTGGAACCGGTGAACCACGCGAGCAGTTTAGATGCATGCGTGGGACAGAGGGCTCGTAGTACCCGCTAGCGCAGCTATGCAGTGGAAGGGAAGGAGCCTAAATCAATTGAACGAACCCCCGTTTTTTCTTTGATAAAAAGCACAGTACAAAGAGATTAGACTTCGGATGAGACTAAGCAGCCACTGACCGTTACGACGCGCCCCTGACCCATCTTGATTAAGACCAAACAAACAAAACCGATCAAAAATAGAGTAGAGCCTAGTTTAAGCTCTCAAACAAATAAATGAGAGAATGGAAAATGATGAGAATATCCACTAGTAGGGATATATATAGATGGAGAGTCTCTCTCAGTAAAGAGAGTTGTAGGTTCGTAGGAAAGGAAAGTAGCGAAGCAATGAGGCACACAACGAATGAGCGAAGCAACTTTACCGGAAGGGAGAGGTGAATGAGCGAATGAATCAGTTTCCCCTTTTTCAATAACAAAAAAGGAAAGAAAGAAGGGCCAACTATTAGAATATTAGTAAAAGCACCTTAGCCTATCTCTCGATATAGGAAGGGGCCTTTTCTTGCTCGTTAGCACTCCCTTACCCTTATTTCTCAAAGGTTTTGCATTTAGTTGTCTACGCCTTTTGAAAACCTGACTCTAACTACTAATAATAATAAAGGGGCTTCTTTCTTCAAATATCCTATCAAGTTGGGGCTGAAAAGCTTTGAGTTTAGGGGTGGTTTGGAACCCTATACAAGGGGCTTTTCCTTTCAAATGACACCTCTTTCTTCTGCGAGGGCGTTGCACGAAACCAACCCGATCCCACGCCCGATCAAGTACCTGTTGCTTTGCTGGTAGGCCCACTTAGGTTAGGGTTGTCCCTCAGTTCTTACCAACCTCCGGTGTGTAATTGACATGTTGCTAGCTTCAATCAACTCGGTGGAATAAGAATCATTGATTCCCTTGTCTATTTCTTATTCATTCATAGCGTTCGGCTGGTGCGTACTCCTTTCACAACCCGGAACAACTCTGAACGTTAGGGAAGATAAGGGAAGACCACCTGAGCGAACTGACCGAAGGGACTTGACTTATTCGAACCGAAGGATAGCGGCTTCAAACTCAGCCTATCACGAGTAGCTTCGCTGCTTGATCGGCGGGGAGGAGCATCTCAAAGTATGGGGCAAAGGATCAAGCGCTTTGACTTTGTCTCCCGGGATCCACCACAGTTTTAGTTTGAGAGCCGTGTGATGGGTGACTATCCAGCACGGTTCGGAGAGCACTTTGAGTCTGCGTTGGTGAAGAAGCCCCCCCTATCAAGAAAGAAGTGGCTCTTCCCATGGCGGAGTCGCCATTGACTCTATTTATTATTATGGTAAATCATTGTATCAAGATGTCAATCTGAGATCTTATTTTGGTTCGATACGTCCACCTACGAGACTGACCTTTGGCTTTCGTCTTGGTAGGTGTATTATTTTACATTTTCCAAAAATAACATTCATTCATTTCTTTCTTCCCCGTCGACCACGAGGACTGAAACGACACGCAAAATCTAAACCCGGAAAGGATCAGGGCCGGTGGTGGGCATTTGGGAAAGTCGGGCCAATTGGGTGTCTTCATTCAAGTGACGATACAGAAGAAGAACGAAACAAAGTGAGAGGCCGGGAGGCAGAGAAAAGAGTGGAGTCGATGATCAGGCTCGACGACCAGGAAAAGCAAAACGAAATTAGGATTTGGCCGTTAAAGAAGCAAGACTATGGATACCATGACCGATCACCATCGAGAAAGAAGAATCTTTCTAAATCACTTTGCGTCAGCGGGGCCTTCAAGCATCCAAAATATGCCGGAGTTGTAAATGACATAGCGTTCCTAATCGAAAATGACGACTCCTTCAGAAAAACTCAGTTATTCAAGTTCTTTTTCCCAAATCAGTCCCGCTCCGATGGCCCGACAAGTCATCTACTTAAAAGAACCGTCCCCGCAGTGCGCCCCTCCTTGAATTATTCGGTCATGCAATACTTATTGAATACAAAGAACAAAATGCATTTCGACCCCGTCAGAGTTCTCAATCATTTCGTGGCACCGGGCGTGGCTGAACCATCTACGATGGGGGGAGCGAATACACAGGGAAGAAGCTTAGATAAGAGAATACGTTCTCGCATCGCTTTTTTTGTAGAAAGCTCGACCAGCAAGAAAAAGTGTTTGGCCGAACCCAAAAAGAGGTTAACCCACTTCATTCGCCAAGCAAATGATCTTCGTTTTGCAGGAACAACAAAAACAACCATCTCGCTCTTTCCTTTCTTCGGTGCTACCTTTTTCTTTCTAAGGGATGGGGTTGGGATGTATAAAAACTTTTTTTTTTAGGATACCCGGGAACAACTCCTAGGTCAATTAAGGATCAAATGTTGGAACCTCATGGGTAAGGAGGATAAGGTAATAGAATTGATAGAGAAATTCATAAACCTAGGTGGGATAGGAGAATTGATAAAGGGAATAGTGATGATGATAGAGATCATACTGAGAAACAGAAGAATTCCGTATGGGTACAACTCTTATTTGAACGAAGTGCAAAAAATGCGATCTTTGTTGTCTAATAGAACAAAGACTAATACATTGATTGTGTTAGTCAAGATCCAATCCATTTATCAAAGTGCTTCTCCGATTGCTCAAGACATCTCTTTTTAA

mRNA sequence

ATGAAGAAGAAGAGAGATCCTTTTTTGAACAGGAAAATTTGGTCACGTAGATCTTCGATTTTGCCAGAATTCGTTGATAGCTCCATACGAATTTACAATGGAAAAACTTCTGTTCGTTGTAAGATCACTGAAGGAAGGGTTGGTCATAAATTTGGAGAGTTTGCTTCGACACGGAAACGAAGACTTTCGAGAACAAATATTGGACCGGGAAAAAAAGGGGAGAAAGTCAAGGCGCATATGGCACGAAAAGGAAATCCAATTTTGGTAAGACTTGATCTGAATCATGTCAATCTGAGATCTTATTTTGGTTCGATACGTCCACCTACGAGACTGACCTTTGGCTTTCGTCTTGGTAGGTGTATTATTTTACATTTTCCAAAAATAACATTCATTCATTTCTTTCTTCCCCGTCGACCACGAGGACTGAAACGACACGCAAAATCTAAACCCGGAAAGGATCAGGGCCGGTGGTGGGCATTTGGGAAAGTCGGGCCAATTGGGTGTCTTCATTCAAGTGACGATACAGAAGAAGAACGAAACAAAGTGAGAGGCCGGGAGGCAGAGAAAAGAGTGGAGTCGATGATCAGGCTCGACGACCAGGAAAAGCAAAACGAAATTAGGATTTGGCCGTTAAAGAAGCAAGACTATGGATACCATGACCGATCACCATCGAGAAAGAAGAATCTTTCTAAATCACTTTGCGTCAGCGGGGCCTTCAAGCATCCAAAATATGCCGGAGTTGTAAATGACATAGCGTTCCTAATCGAAAATGACGACTCCTTCAGAAAAACTCAGTTATTCAAGTTCTTTTTCCCAAATCAGTCCCGCTCCGATGGCCCGACAAGTCATCTACTTAAAAGAACCGTCCCCGCAGTGCGCCCCTCCTTGAATTATTCGGTCATGCAATACTTATTGAATACAAAGAACAAAATGCATTTCGACCCCGTCAGAGTTCTCAATCATTTCGTGGCACCGGGCGTGGCTGAACCATCTACGATGGGGGGAGCGAATACACAGGGAAGAAGCTTAGATAAGAGAATACGTTCTCGCATCGCTTTTTTTGTAGAAAGCTCGACCAGCAAGAAAAAGTGTTTGGCCGAACCCAAAAAGAGGTTAACCCACTTCATTCGCCAAGCAAATGATCTTCGTTTTGCAGGAACAACAAAAACAACCATCTCGCTCTTTCCTTTCTTCGGTGCTACCTTTTTCTTTCTAAGGGATGGGGATACCCGGGAACAACTCCTAGGTCAATTAAGGATCAAATGTTGGAACCTCATGGGTAAGGAGGATAAGGTAATAGAATTGATAGAGAAATTCATAAACCTAGGTGGGATAGGAGAATTGATAAAGGGAATAGTGATGATGATAGAGATCATACTGAGAAACAGAAGAATTCCGTATGGGTACAACTCTTATTTGAACGAAGTGCAAAAAATGCGATCTTTGTTGTCTAATAGAACAAAGACTAATACATTGATTGTGTTAGTCAAGATCCAATCCATTTATCAAAGTGCTTCTCCGATTGCTCAAGACATCTCTTTTTAA

Coding sequence (CDS)

ATGAAGAAGAAGAGAGATCCTTTTTTGAACAGGAAAATTTGGTCACGTAGATCTTCGATTTTGCCAGAATTCGTTGATAGCTCCATACGAATTTACAATGGAAAAACTTCTGTTCGTTGTAAGATCACTGAAGGAAGGGTTGGTCATAAATTTGGAGAGTTTGCTTCGACACGGAAACGAAGACTTTCGAGAACAAATATTGGACCGGGAAAAAAAGGGGAGAAAGTCAAGGCGCATATGGCACGAAAAGGAAATCCAATTTTGGTAAGACTTGATCTGAATCATGTCAATCTGAGATCTTATTTTGGTTCGATACGTCCACCTACGAGACTGACCTTTGGCTTTCGTCTTGGTAGGTGTATTATTTTACATTTTCCAAAAATAACATTCATTCATTTCTTTCTTCCCCGTCGACCACGAGGACTGAAACGACACGCAAAATCTAAACCCGGAAAGGATCAGGGCCGGTGGTGGGCATTTGGGAAAGTCGGGCCAATTGGGTGTCTTCATTCAAGTGACGATACAGAAGAAGAACGAAACAAAGTGAGAGGCCGGGAGGCAGAGAAAAGAGTGGAGTCGATGATCAGGCTCGACGACCAGGAAAAGCAAAACGAAATTAGGATTTGGCCGTTAAAGAAGCAAGACTATGGATACCATGACCGATCACCATCGAGAAAGAAGAATCTTTCTAAATCACTTTGCGTCAGCGGGGCCTTCAAGCATCCAAAATATGCCGGAGTTGTAAATGACATAGCGTTCCTAATCGAAAATGACGACTCCTTCAGAAAAACTCAGTTATTCAAGTTCTTTTTCCCAAATCAGTCCCGCTCCGATGGCCCGACAAGTCATCTACTTAAAAGAACCGTCCCCGCAGTGCGCCCCTCCTTGAATTATTCGGTCATGCAATACTTATTGAATACAAAGAACAAAATGCATTTCGACCCCGTCAGAGTTCTCAATCATTTCGTGGCACCGGGCGTGGCTGAACCATCTACGATGGGGGGAGCGAATACACAGGGAAGAAGCTTAGATAAGAGAATACGTTCTCGCATCGCTTTTTTTGTAGAAAGCTCGACCAGCAAGAAAAAGTGTTTGGCCGAACCCAAAAAGAGGTTAACCCACTTCATTCGCCAAGCAAATGATCTTCGTTTTGCAGGAACAACAAAAACAACCATCTCGCTCTTTCCTTTCTTCGGTGCTACCTTTTTCTTTCTAAGGGATGGGGATACCCGGGAACAACTCCTAGGTCAATTAAGGATCAAATGTTGGAACCTCATGGGTAAGGAGGATAAGGTAATAGAATTGATAGAGAAATTCATAAACCTAGGTGGGATAGGAGAATTGATAAAGGGAATAGTGATGATGATAGAGATCATACTGAGAAACAGAAGAATTCCGTATGGGTACAACTCTTATTTGAACGAAGTGCAAAAAATGCGATCTTTGTTGTCTAATAGAACAAAGACTAATACATTGATTGTGTTAGTCAAGATCCAATCCATTTATCAAAGTGCTTCTCCGATTGCTCAAGACATCTCTTTTTAA

Homology

[Close]

BLAST of CmoCh13G003010 vs. Swiss-Prot
Match: RT03_OENBE (Ribosomal protein S3, mitochondrial OS=Oenothera berteroana GN=RPS3 PE=3 SV=2)

HSP 1 Score: 724.9 bits (1870), Expect = 6.0e-208
Identity = 379/464 (81.68%), Postives = 399/464 (85.99%), Query Frame = 1


Query: 80  MARKGNPILVRLDLNH-------------------VNLRSYFGSIRPPTRLTFGFRLGRC 139
           MARKGNPI VRLDLN                    VNLRSYFGSIRPPTRLTFGFRLGRC
Sbjct: 1   MARKGNPISVRLDLNRSSDSSWFSDYYYGKSVYQDVNLRSYFGSIRPPTRLTFGFRLGRC 60

Query: 140 IILHFPKITFIHFFLPRRPRGLKRHAKSKPGKDQGRWWAFGKVGPIGCLHSSDDTEEERN 199
           IILHFPK TFIHFFLPRRPR LKR  KS+PGK++ RWW FGKVGPIGCLHS+DDTEEERN
Sbjct: 61  IILHFPKRTFIHFFLPRRPRRLKRGKKSRPGKEKARWWEFGKVGPIGCLHSNDDTEEERN 120

Query: 200 KVRGREAEKRVESMIRLDDQEKQNEIRIWPLKKQDYGYHDRSPSRKKNLSKSLCVSGAFK 259
           +V GR A KRVES IRLDD+EKQNEIRIWP KKQ YGYHDRSPS KKNLSKSL VSGAFK
Sbjct: 121 EVGGRGAGKRVES-IRLDDREKQNEIRIWPKKKQGYGYHDRSPSIKKNLSKSLRVSGAFK 180

Query: 260 HPKYAGVVNDIAFLIENDDSFRKTQLFKFFFPNQSRSDGPTSHLLKRTVPAVRPSLNYSV 319
           HPKYAGV+NDIAFLIENDDSFRKT+LFKFFFP +SRSDGPTSHLLKRT PAVRPSLNYSV
Sbjct: 181 HPKYAGVLNDIAFLIENDDSFRKTKLFKFFFPKKSRSDGPTSHLLKRTPPAVRPSLNYSV 240

Query: 320 MQYLLNTKNKMHFDPVRVLNHFVAPGVAEPSTMGGANTQGRSLDKRIRSRIAFFVESSTS 379
           MQY LNTKN+MHFDP+ VLNHFVAPGVAEPSTMGGAN QGRS + RIRSRIAFFVESSTS
Sbjct: 241 MQYYLNTKNQMHFDPLVVLNHFVAPGVAEPSTMGGANRQGRSNELRIRSRIAFFVESSTS 300

Query: 380 KKKCLAEPKKRLTHFIRQANDLRFAGTTKTTISLFPFFGATFFFLRDG----------DT 439
           +KK LAE KK L HFIRQ NDLRFAG TKTTISLFPFFGATFFF RDG          D 
Sbjct: 301 EKKSLAEDKKGLPHFIRQENDLRFAGRTKTTISLFPFFGATFFFPRDGVGVYKHLFFEDA 360

Query: 440 REQLLGQLRIKCWNLMGKEDKVIELIEKFINLGGIGELIKGIVMMIEIILRNRRIPYGYN 499
           REQLLGQLRIKCW LMGK DKV+ELIEKFI+LGGIGELIKGI +MIEIILRNRRIPYGYN
Sbjct: 361 REQLLGQLRIKCWKLMGK-DKVMELIEKFIDLGGIGELIKGIEIMIEIILRNRRIPYGYN 420

Query: 500 SYLNEVQKMRSLLSNRTKTNTLIVLVKIQSIYQSASPIAQDISF 515
           SYLNEV+KMRSLLSNRTKTNT+I  VKI+S+YQSASPIAQDISF
Sbjct: 421 SYLNEVKKMRSLLSNRTKTNTIIESVKIKSVYQSASPIAQDISF 462

[Close]

BLAST of CmoCh13G003010 vs. Swiss-Prot
Match: RT03_PETHY (Ribosomal protein S3, mitochondrial OS=Petunia hybrida GN=YRPS3 PE=2 SV=1)

HSP 1 Score: 723.8 bits (1867), Expect = 1.3e-207
Identity = 380/463 (82.07%), Postives = 398/463 (85.96%), Query Frame = 1


Query: 80  MARKGNPILVRLDLNH------------------VNLRSYFGSIRPPTRLTFGFRLGRCI 139
           MARKGNPI VRLDLN                   VNLRSYFGSIRPPTRLTFGFRLGRCI
Sbjct: 1   MARKGNPISVRLDLNRSSDSSWFSYYYGKSVYQDVNLRSYFGSIRPPTRLTFGFRLGRCI 60

Query: 140 ILHFPKITFIHFFLPRRPRGLKRHAKSKPGKDQGRWWAFGKVGPIGCLHSSDDTEEERNK 199
           ILHFPK TFIHFFLPRRPR LKR  KS+P K++GRW AFGKVGPIGCLHSSD TEEERN+
Sbjct: 61  ILHFPKRTFIHFFLPRRPRRLKRREKSRPVKEKGRWGAFGKVGPIGCLHSSDGTEEERNE 120

Query: 200 VRGREAEKRVESMIRLDDQEKQNEIRIWPLKKQDYGYHDRSPSRKKNLSKSLCVSGAFKH 259
           VRGR A KRVES IRLDD+EKQNEIRIWP KKQ YGYHDRSPS KKNLSKSL VSGAFKH
Sbjct: 121 VRGRGAGKRVES-IRLDDREKQNEIRIWPKKKQGYGYHDRSPSIKKNLSKSLRVSGAFKH 180

Query: 260 PKYAGVVNDIAFLIENDDSFRKTQLFKFFFPNQSRSDGPTSHLLKRTVPAVRPSLNYSVM 319
           PKYAG+ NDIAFLIENDDSFRKT LFKFFFP +SRSD PTSHLLKRT+PAVRPSLNYSVM
Sbjct: 181 PKYAGIENDIAFLIENDDSFRKTNLFKFFFPKKSRSDRPTSHLLKRTLPAVRPSLNYSVM 240

Query: 320 QYLLNTKNKMHFDPVRVLNHFVAPGVAEPSTMGGANTQGRSLDKRIRSRIAFFVESSTSK 379
           QYLLNTKNK+HFDPV VLNHFVAPGVAEPSTMGGAN QGRSLDKRI S IAFFVE+STS+
Sbjct: 241 QYLLNTKNKIHFDPVVVLNHFVAPGVAEPSTMGGANAQGRSLDKRIASCIAFFVENSTSE 300

Query: 380 KKCLAEPKKRLTHFIRQANDLRFAGTTKTTISLFPFFGATFFFLRDG----------DTR 439
           KKCLAE KKR+THFIRQANDLRFAGTTKTTISLFPFFGATFFF RDG          D R
Sbjct: 301 KKCLAEAKKRVTHFIRQANDLRFAGTTKTTISLFPFFGATFFFPRDGVGVYNNLFFEDAR 360

Query: 440 EQLLGQLRIKCWNLMGKEDKVIELIEKFINLGGIGELIKGIVMMIEIILRNRRIPYGYNS 499
           EQLLGQLR KCWNLMGK DKV+ELIEKFI+L  IGELI+GI MMIEIILRNRRIPYGYN 
Sbjct: 361 EQLLGQLRRKCWNLMGK-DKVMELIEKFIDLNRIGELIRGIEMMIEIILRNRRIPYGYNY 420

Query: 500 YLNEVQKMRSLLSNRTKTNTLIVLVKIQSIYQSASPIAQDISF 515
           YLNEV+KMRSLL NRT TNTLI  VKI+S+YQSASPIAQDISF
Sbjct: 421 YLNEVKKMRSLLYNRTNTNTLIESVKIKSVYQSASPIAQDISF 461

[Close]

BLAST of CmoCh13G003010 vs. Swiss-Prot
Match: RT03_MAIZE (Ribosomal protein S3, mitochondrial OS=Zea mays GN=RPS3 PE=3 SV=1)

HSP 1 Score: 698.7 bits (1802), Expect = 4.6e-200
Identity = 374/465 (80.43%), Postives = 390/465 (83.87%), Query Frame = 1


Query: 80  MARKGNPILVRLDLNH-------------------VNLRSYFGSIRPPTRLTFGFRLGRC 139
           MARKGNPI VRLDLN                    VNLRSYF SIRPPTRLTFGFRLGRC
Sbjct: 1   MARKGNPISVRLDLNRSSDPSRFSDYYYGKSLYQDVNLRSYFSSIRPPTRLTFGFRLGRC 60

Query: 140 IILHFPKITFIHFFLPRRPRGLKRHAKSKPGKDQGRWWAFGKVGPIGCLHSSDDTEEERN 199
           IILHFPK TFIHFFLPRRP  LKR  KS+PGKD+GRWWAFGKVGPIGCLHSS+ TEEERN
Sbjct: 61  IILHFPKRTFIHFFLPRRPLRLKRRDKSRPGKDKGRWWAFGKVGPIGCLHSSEGTEEERN 120

Query: 200 KVRGREAEKRVESMIRLDDQEKQNEIRIWPLKKQDYGYHDRSPSRKKNLSKSLCVSGAFK 259
           +VRGR A KRVES+    D+EKQNEIRIWP K Q YGYHDR+PSRKKN SKSL VSGAFK
Sbjct: 121 EVRGRGAGKRVESI----DREKQNEIRIWPKKMQRYGYHDRTPSRKKNFSKSLRVSGAFK 180

Query: 260 HPKYAGVVNDIAFLIENDDSFRKTQLFKFFF-PNQSRSDGPTSHLLKRTVPAVRPSLNYS 319
           HPKYAGVVNDIAFLIENDDSF KT+LFKFFF P +SRSDGPTSHLLKRT+PAVRPSLNYS
Sbjct: 181 HPKYAGVVNDIAFLIENDDSFIKTKLFKFFFLPKKSRSDGPTSHLLKRTLPAVRPSLNYS 240

Query: 320 VMQYLLNTKNKMHFDPVRVLNHFVAPGVAEPSTMGGANTQGRSLDKRIRSRIAFFVESST 379
           VMQY  NTKNKMHFDPV VLNHFVAPGVAEPSTMGGA  +G SLDKRIRSRIAFFVESST
Sbjct: 241 VMQYFFNTKNKMHFDPVVVLNHFVAPGVAEPSTMGGA--KGGSLDKRIRSRIAFFVESST 300

Query: 380 SKKKCLAEPKKRLTHFIRQANDLRFAGTTKTTISLFPFFGATFFFLRDG----------D 439
           S KKCLA  KKRL HFIRQANDLRFAGTTKTTISLFPFFGATFFF RDG           
Sbjct: 301 SDKKCLARAKKRLIHFIRQANDLRFAGTTKTTISLFPFFGATFFFSRDGVGVYNNPFYEY 360

Query: 440 TREQLLGQLRIKCWNLMGKEDKVIELIEKFINLGGIGELIKGIVMMIEIILRNRRIPYGY 499
            REQLLGQLRIKC NLMGK DKV+ELIEKFI+LG IG+LIKGI MMIEIILR RRIPYGY
Sbjct: 361 AREQLLGQLRIKCRNLMGK-DKVMELIEKFIDLGRIGKLIKGIEMMIEIILRKRRIPYGY 420

Query: 500 NSYLNEVQKMRSLLSNRTKTNTLIVLVKIQSIYQSASPIAQDISF 515
           NSYLNEVQKMRS LSNRT TNTLI  VKI+S+YQSAS IAQDISF
Sbjct: 421 NSYLNEVQKMRSFLSNRTNTNTLIESVKIKSVYQSASLIAQDISF 458

[Close]

BLAST of CmoCh13G003010 vs. Swiss-Prot
Match: RT03_ARATH (Ribosomal protein S3, mitochondrial OS=Arabidopsis thaliana GN=RPS3 PE=2 SV=3)

HSP 1 Score: 664.8 bits (1714), Expect = 7.4e-190
Identity = 354/462 (76.62%), Postives = 379/462 (82.03%), Query Frame = 1


Query: 80  MARKGNPILVRLDLNH-------------------VNLRSYFGSIRPPTRLTFGFRLGRC 139
           MARKGNPI VRL  N                    VNLRSYFGSIRPPTRLTFGFRLGRC
Sbjct: 1   MARKGNPISVRLGKNRSSDSSWFSEYYYGKFVYQDVNLRSYFGSIRPPTRLTFGFRLGRC 60

Query: 140 IILHFPKITFIHFFLPRRPRGLKRHAKSKPGKDQGRWWA-FGKVGPIGCLHSSDDTEEER 199
           IILHFPK TFIHFFLPRRPR LKR  K++PGK++GRWW  FGK GPI CLHSSDDTEEER
Sbjct: 61  IILHFPKRTFIHFFLPRRPRRLKRREKTRPGKEKGRWWTTFGKAGPIECLHSSDDTEEER 120

Query: 200 NKVRGREAEKRVESMIRLDDQEKQNEIRIWPLKKQDYGYHDRSPSRKKNLSKSLCVSGAF 259
           N+VRGR A KRVES IRLDD++KQNEIR WP KKQ YGYHDR PS KKNLSK L +SGAF
Sbjct: 121 NEVRGRGARKRVES-IRLDDRKKQNEIRGWPKKKQRYGYHDRLPSIKKNLSKLLRISGAF 180

Query: 260 KHPKYAGVVNDIAFLIENDDSFRKTQLFKFFFPNQSRSDGPTSHLLKRTVPAVRPSLNYS 319
           KHPKYAGVVNDIAFLIENDDSF+KT+LFK FF N+SRSDGPTS+L  RT+PAVRPSLN+ 
Sbjct: 181 KHPKYAGVVNDIAFLIENDDSFKKTKLFKLFFQNKSRSDGPTSYL--RTLPAVRPSLNFL 240

Query: 320 VMQYLLNTKNKMHFDPVRVLNHFVAPGVAEPSTMGGANTQGRSLDKRIRSRIAFFVESST 379
           VMQY  NTKN+++FDPV VLNHFVAPG AEPSTMG AN QGRSL KRIRSRIAFFVES T
Sbjct: 241 VMQYFFNTKNQINFDPVVVLNHFVAPGAAEPSTMGRANAQGRSLQKRIRSRIAFFVESLT 300

Query: 380 SKKKCLAEPKKRLTHFIRQANDLRFAGTTKTTISLFPFFGATFFFLRDG-------DTRE 439
           S+KKCLAE K RLTHFIR ANDLRFAGTTKTTISLFPFFGATFFFLRDG       D RE
Sbjct: 301 SEKKCLAEAKNRLTHFIRLANDLRFAGTTKTTISLFPFFGATFFFLRDGVGVYNNLDARE 360

Query: 440 QLLGQLRIKCWNLMGKEDKVIELIEKFINLGGIGELIKGIVMMIEIILRNRRIPYGYNSY 499
           QLL QLR+KCWNL+GK DK++ELIEK  NLGGI ELIK I MMIEIILR R IPY YNSY
Sbjct: 361 QLLNQLRVKCWNLVGK-DKIMELIEKLKNLGGIEELIKVIDMMIEIILRKRGIPYRYNSY 420

Query: 500 LNEVQKMRSLLSNRTKTNTLIVLVKIQSIYQSASPIAQDISF 515
             EV+KMRS LSNRT T TLI  VKI+S+YQSAS IAQDISF
Sbjct: 421 FYEVKKMRSFLSNRTNTKTLIESVKIKSVYQSASLIAQDISF 458

[Close]

BLAST of CmoCh13G003010 vs. Swiss-Prot
Match: RT03_BRANA (Ribosomal protein S3, mitochondrial OS=Brassica napus GN=RPS3 PE=3 SV=1)

HSP 1 Score: 656.0 bits (1691), Expect = 3.4e-187
Identity = 354/463 (76.46%), Postives = 378/463 (81.64%), Query Frame = 1


Query: 80  MARKGNPILVRLDLNH-------------------VNLRSYFGSIRPPTRLTFGFRLGRC 139
           MARKGNPI VRL  N                    VNLRSYFGSIRPPTRLTFGFRLGRC
Sbjct: 1   MARKGNPISVRLGKNRSSDSSRFSEYYYGKFVYQDVNLRSYFGSIRPPTRLTFGFRLGRC 60

Query: 140 IILHFPKITFIHFFLPRRPRGLKRHAKSKPGKDQGRWWAF-GKVGPIGCLHSSDDTEEER 199
           I+LHFPK TFIHFFLPRRPR LKR  K++PGK++GRWW   GK GPIGCL   DDTEEER
Sbjct: 61  ILLHFPKRTFIHFFLPRRPRRLKRREKTRPGKEKGRWWTTPGKAGPIGCLR--DDTEEER 120

Query: 200 NKVRGREAEKRVESMIRLDDQEKQNEIRIWPLKKQDYGYHDRSPSRKKNLSKSLCVSGAF 259
           N+VRGR A KRVES IRLDD++KQNEIR WP KKQ YGYHDR+PS KKNLSKSL +SGAF
Sbjct: 121 NEVRGRGARKRVES-IRLDDRKKQNEIRGWPKKKQRYGYHDRTPSIKKNLSKSLRISGAF 180

Query: 260 KHPKYAGVVNDIAFLIENDDSFRKTQLFKFFFPNQSRSDGPTSHLLKRTVPAVRPSLNYS 319
           KHPKY GVVNDIAFLIENDDSFRKT+LFKFFFP +SRSDGPTS+L  RT+PAV PSLN+ 
Sbjct: 181 KHPKYGGVVNDIAFLIENDDSFRKTKLFKFFFPKKSRSDGPTSYL--RTLPAVGPSLNFL 240

Query: 320 VMQYLLNTKNKMHFDPVRVLNHFVAPGVAEPSTMGGANTQG-RSLDKRIRSRIAFFVESS 379
           VMQY  NTKN+M+FDPV VLNHFVAPG AEPSTMG AN  G RSL KRIRSRIAFFVESS
Sbjct: 241 VMQYFFNTKNQMNFDPVVVLNHFVAPGAAEPSTMGRANGTGDRSLQKRIRSRIAFFVESS 300

Query: 380 TSKKKCLAEPKKRLTHFIRQANDLRFAGTTKTTISLFPFFGATFFFLRDG-------DTR 439
           TS+KKCLAE K RLTH IR ANDL FAGTTKTTISLFPFFGATFFFLRDG       D R
Sbjct: 301 TSEKKCLAEAKNRLTHLIRLANDLGFAGTTKTTISLFPFFGATFFFLRDGVGVTNNLDAR 360

Query: 440 EQLLGQLRIKCWNLMGKEDKVIELIEKFINLGGIGELIKGIVMMIEIILRNRRIPYGYNS 499
           EQLL QLR+KCWNL+GK DKV+ELIEKF +LGGI ELIK I MMIEIILR R IPYGYNS
Sbjct: 361 EQLLNQLRVKCWNLLGK-DKVMELIEKFKDLGGIEELIKVIDMMIEIILRKRGIPYGYNS 420

Query: 500 YLNEVQKMRSLLSNRTKTNTLIVLVKIQSIYQSASPIAQDISF 515
           Y NEVQKMRS LSNRT T TLI  VKI+S+YQSAS IAQDISF
Sbjct: 421 YFNEVQKMRSFLSNRTNTKTLIESVKIKSVYQSASLIAQDISF 457

[Close]

BLAST of CmoCh13G003010 vs. TrEMBL
Match: D5I3F1_CUCPE (Ribosomal protein S3 OS=Cucurbita pepo GN=rps3 PE=3 SV=1)

HSP 1 Score: 809.7 bits (2090), Expect = 2.1e-231
Identity = 416/464 (89.66%), Postives = 421/464 (90.73%), Query Frame = 1


Query: 80  MARKGNPILVRLDLNH-------------------VNLRSYFGSIRPPTRLTFGFRLGRC 139
           MARKGNPI VRLDLN                    VNLRSYFGSIRPPTRLTFGFRLGRC
Sbjct: 1   MARKGNPISVRLDLNRSSDSSWFSDYYYGKLLYQDVNLRSYFGSIRPPTRLTFGFRLGRC 60

Query: 140 IILHFPKITFIHFFLPRRPRGLKRHAKSKPGKDQGRWWAFGKVGPIGCLHSSDDTEEERN 199
           IILHFPKITFIHFFLPRRPRGLKR AKSKPGKDQGRWWAFGKVGPIGCLHSSDDTEEERN
Sbjct: 61  IILHFPKITFIHFFLPRRPRGLKRRAKSKPGKDQGRWWAFGKVGPIGCLHSSDDTEEERN 120

Query: 200 KVRGREAEKRVESMIRLDDQEKQNEIRIWPLKKQDYGYHDRSPSRKKNLSKSLCVSGAFK 259
           KVRGREAEKRVESMIRLDD+EKQNEIRIWP KKQDYGYHDRSPSRKKNLSK L VSGAFK
Sbjct: 121 KVRGREAEKRVESMIRLDDREKQNEIRIWPKKKQDYGYHDRSPSRKKNLSKLLRVSGAFK 180

Query: 260 HPKYAGVVNDIAFLIENDDSFRKTQLFKFFFPNQSRSDGPTSHLLKRTVPAVRPSLNYSV 319
           HPKYAGVVNDIAFLIENDDSFRKTQLFKFFFPNQSRSDGPTSHLLKRT+PAVRPSLNY V
Sbjct: 181 HPKYAGVVNDIAFLIENDDSFRKTQLFKFFFPNQSRSDGPTSHLLKRTLPAVRPSLNYLV 240

Query: 320 MQYLLNTKNKMHFDPVRVLNHFVAPGVAEPSTMGGANTQGRSLDKRIRSRIAFFVESSTS 379
           MQYLLNTKNKMHFDPV VLNHFVAPGVAEPSTMGGANTQGRSLDKRIRSRIAFFVES TS
Sbjct: 241 MQYLLNTKNKMHFDPVGVLNHFVAPGVAEPSTMGGANTQGRSLDKRIRSRIAFFVESLTS 300

Query: 380 KKKCLAEPKKRLTHFIRQANDLRFAGTTKTTISLFPFFGATFFFLRDG----------DT 439
           +KKCLAEPKKRLTHFIRQANDLRFAGTTKTTISLFPFFGATFFF RDG          DT
Sbjct: 301 EKKCLAEPKKRLTHFIRQANDLRFAGTTKTTISLFPFFGATFFFPRDGVGMYKNLFFEDT 360

Query: 440 REQLLGQLRIKCWNLMGKEDKVIELIEKFINLGGIGELIKGIVMMIEIILRNRRIPYGYN 499
           REQLLGQLRIKCWNLMGKEDKVIELIEKFI+LGGIGELIKGI MMIEIILRNRRIPYGYN
Sbjct: 361 REQLLGQLRIKCWNLMGKEDKVIELIEKFIDLGGIGELIKGIEMMIEIILRNRRIPYGYN 420

Query: 500 SYLNEVQKMRSLLSNRTKTNTLIVLVKIQSIYQSASPIAQDISF 515
           SYLNEVQKMRSLLSNRTKTNTLI  VKIQS+YQSAS IAQDISF
Sbjct: 421 SYLNEVQKMRSLLSNRTKTNTLIESVKIQSVYQSASLIAQDISF 464

[Close]

BLAST of CmoCh13G003010 vs. TrEMBL
Match: D5I3A1_CITLA (Ribosomal protein S3 OS=Citrullus lanatus GN=rps3 PE=3 SV=1)

HSP 1 Score: 766.1 bits (1977), Expect = 2.6e-218
Identity = 400/464 (86.21%), Postives = 412/464 (88.79%), Query Frame = 1


Query: 80  MARKGNPILVRLDLNH-------------------VNLRSYFGSIRPPTRLTFGFRLGRC 139
           MARKGNPI VRLDLN                    VNLRSYFGSIRPPTRLTFGFRLGRC
Sbjct: 1   MARKGNPISVRLDLNRSSDSSWFSDYYYGKLLYQDVNLRSYFGSIRPPTRLTFGFRLGRC 60

Query: 140 IILHFPKITFIHFFLPRRPRGLKRHAKSKPGKDQGRWWAFGKVGPIGCLHSSDDTEEERN 199
           IILHFPK TFIHFFLPRRPR LKR  KSKPGK++GRWWAFGKVGPIGCLHSSDDTEEERN
Sbjct: 61  IILHFPKRTFIHFFLPRRPRRLKRREKSKPGKEKGRWWAFGKVGPIGCLHSSDDTEEERN 120

Query: 200 KVRGREAEKRVESMIRLDDQEKQNEIRIWPLKKQDYGYHDRSPSRKKNLSKSLCVSGAFK 259
           +VRGREAEKRVES IRLDD+EKQNEIRIWP KKQ YGYHDRSPS KKNLSK L VSGAFK
Sbjct: 121 EVRGREAEKRVES-IRLDDREKQNEIRIWPKKKQRYGYHDRSPSIKKNLSKLLRVSGAFK 180

Query: 260 HPKYAGVVNDIAFLIENDDSFRKTQLFKFFFPNQSRSDGPTSHLLKRTVPAVRPSLNYSV 319
           HPKYAGVVNDIAFLIENDDSFRKT+LFKFFFP +SRSDGPTSHLLKRT+PAVRPSLNY V
Sbjct: 181 HPKYAGVVNDIAFLIENDDSFRKTKLFKFFFPKKSRSDGPTSHLLKRTLPAVRPSLNYLV 240

Query: 320 MQYLLNTKNKMHFDPVRVLNHFVAPGVAEPSTMGGANTQGRSLDKRIRSRIAFFVESSTS 379
           MQYLLNTKNKMHFDPV VLNHFVAPGVAEPSTMGGANTQGRSLDKRIRSRIAFFVES TS
Sbjct: 241 MQYLLNTKNKMHFDPVVVLNHFVAPGVAEPSTMGGANTQGRSLDKRIRSRIAFFVESLTS 300

Query: 380 KKKCLAEPKKRLTHFIRQANDLRFAGTTKTTISLFPFFGATFFFLRDG----------DT 439
           +KKCLAE KKRLTHFIRQANDLRFAGTTKTTISLFPFFGATFFF RDG          DT
Sbjct: 301 EKKCLAEAKKRLTHFIRQANDLRFAGTTKTTISLFPFFGATFFFPRDGVGMYKNLFFEDT 360

Query: 440 REQLLGQLRIKCWNLMGKEDKVIELIEKFINLGGIGELIKGIVMMIEIILRNRRIPYGYN 499
           REQLLGQLRIKCWNLMGK DKVIELIEKFI+LGGIGELIKGI MMIEIILRNRRIPYGYN
Sbjct: 361 REQLLGQLRIKCWNLMGK-DKVIELIEKFIDLGGIGELIKGIEMMIEIILRNRRIPYGYN 420

Query: 500 SYLNEVQKMRSLLSNRTKTNTLIVLVKIQSIYQSASPIAQDISF 515
           SYLNEV+KMRSLLSNRTKTNTLI  VKI+S+YQSAS IAQDISF
Sbjct: 421 SYLNEVKKMRSLLSNRTKTNTLIESVKIKSVYQSASLIAQDISF 462

[Close]

BLAST of CmoCh13G003010 vs. TrEMBL
Match: E5DM03_CUCPE (Ribosomal protein S3 (Fragment) OS=Cucurbita pepo GN=rps3 PE=3 SV=1)

HSP 1 Score: 765.8 bits (1976), Expect = 3.4e-218
Identity = 387/410 (94.39%), Postives = 392/410 (95.61%), Query Frame = 1


Query: 115 FRLGRCIILHFPKITFIHFFLPRRPRGLKRHAKSKPGKDQGRWWAFGKVGPIGCLHSSDD 174
           FRLGRCIILHFPKITFIHFFLPRRPRGLKR AKSKPGKDQGRWWAFGKVGPIGCLHSSDD
Sbjct: 1   FRLGRCIILHFPKITFIHFFLPRRPRGLKRRAKSKPGKDQGRWWAFGKVGPIGCLHSSDD 60

Query: 175 TEEERNKVRGREAEKRVESMIRLDDQEKQNEIRIWPLKKQDYGYHDRSPSRKKNLSKSLC 234
           TEEERNKVRGREAEKRVESMIRLDD+EKQNEIRIWP KKQDYGYHDRSPSRKKNLSKSL 
Sbjct: 61  TEEERNKVRGREAEKRVESMIRLDDREKQNEIRIWPKKKQDYGYHDRSPSRKKNLSKSLR 120

Query: 235 VSGAFKHPKYAGVVNDIAFLIENDDSFRKTQLFKFFFPNQSRSDGPTSHLLKRTVPAVRP 294
           VSGAFKHPKYAGVVNDIAFLIENDDSFRKTQLFKFFFPNQSRSDGPTSHLLKRT+PAVRP
Sbjct: 121 VSGAFKHPKYAGVVNDIAFLIENDDSFRKTQLFKFFFPNQSRSDGPTSHLLKRTLPAVRP 180

Query: 295 SLNYSVMQYLLNTKNKMHFDPVRVLNHFVAPGVAEPSTMGGANTQGRSLDKRIRSRIAFF 354
           SLNYSVMQYLLNTKNKMHFDPV VLNHFVAPGVAEPSTMGGANTQGRSLDKRIRSRIAFF
Sbjct: 181 SLNYSVMQYLLNTKNKMHFDPVGVLNHFVAPGVAEPSTMGGANTQGRSLDKRIRSRIAFF 240

Query: 355 VESSTSKKKCLAEPKKRLTHFIRQANDLRFAGTTKTTISLFPFFGATFFFLRDG------ 414
           VESSTS+KKCLAEPKKRLTHFIRQANDLRFAGTTKTTISLFPFFGATFFF RDG      
Sbjct: 241 VESSTSEKKCLAEPKKRLTHFIRQANDLRFAGTTKTTISLFPFFGATFFFPRDGVGMYKN 300

Query: 415 ----DTREQLLGQLRIKCWNLMGKEDKVIELIEKFINLGGIGELIKGIVMMIEIILRNRR 474
               DTREQLLGQLRIKCWNLMGKEDKVIELIEKFI+LGGIGELIKGI MMIEIILRNRR
Sbjct: 301 LFFEDTREQLLGQLRIKCWNLMGKEDKVIELIEKFIDLGGIGELIKGIEMMIEIILRNRR 360

Query: 475 IPYGYNSYLNEVQKMRSLLSNRTKTNTLIVLVKIQSIYQSASPIAQDISF 515
           IPYGYNSYLNEVQKMRSLLSNRTKTNTLI  VKIQS+YQSASPIAQDISF
Sbjct: 361 IPYGYNSYLNEVQKMRSLLSNRTKTNTLIESVKIQSVYQSASPIAQDISF 410

[Close]

BLAST of CmoCh13G003010 vs. TrEMBL
Match: B6VJV8_VITVI (Ribosomal protein S3 OS=Vitis vinifera GN=rps3 PE=3 SV=1)

HSP 1 Score: 745.3 bits (1923), Expect = 4.8e-212
Identity = 388/464 (83.62%), Postives = 407/464 (87.72%), Query Frame = 1


Query: 80  MARKGNPILVRLDLNH-------------------VNLRSYFGSIRPPTRLTFGFRLGRC 139
           MARKGNPI VRLDLN                    VNLRSYFGSIRPPTRLTFGFRLGRC
Sbjct: 1   MARKGNPISVRLDLNRSSDSSWFSDYYYGKSVYQDVNLRSYFGSIRPPTRLTFGFRLGRC 60

Query: 140 IILHFPKITFIHFFLPRRPRGLKRHAKSKPGKDQGRWWAFGKVGPIGCLHSSDDTEEERN 199
           IILHFPK TFIHFFLPRRPRGLKR  KS+PGK++GRWWAFGKVGPIGCLHSSD TEEERN
Sbjct: 61  IILHFPKRTFIHFFLPRRPRGLKRREKSRPGKEKGRWWAFGKVGPIGCLHSSDGTEEERN 120

Query: 200 KVRGREAEKRVESMIRLDDQEKQNEIRIWPLKKQDYGYHDRSPSRKKNLSKSLCVSGAFK 259
           +VRGR A KRVES IRLDD+EKQNE RIWP KKQ YGYHD+SPS KKNLSK L VSGAFK
Sbjct: 121 EVRGRGAGKRVES-IRLDDREKQNERRIWPKKKQRYGYHDQSPSIKKNLSKLLRVSGAFK 180

Query: 260 HPKYAGVVNDIAFLIENDDSFRKTQLFKFFFPNQSRSDGPTSHLLKRTVPAVRPSLNYSV 319
           H KYAGVVNDIAFLIENDDSFRKT+LFKFFFP +SRSDGPTSH+LKRT+PAVRPSLNYSV
Sbjct: 181 HLKYAGVVNDIAFLIENDDSFRKTKLFKFFFPKKSRSDGPTSHILKRTLPAVRPSLNYSV 240

Query: 320 MQYLLNTKNKMHFDPVRVLNHFVAPGVAEPSTMGGANTQGRSLDKRIRSRIAFFVESSTS 379
           MQYLLNTKN++HFD V VLNHFVAPGVAEPSTMGGAN QGRSLDKRIRSRIAFFVESSTS
Sbjct: 241 MQYLLNTKNQIHFDSVVVLNHFVAPGVAEPSTMGGANAQGRSLDKRIRSRIAFFVESSTS 300

Query: 380 KKKCLAEPKKRLTHFIRQANDLRFAGTTKTTISLFPFFGATFFFLRDG----------DT 439
           +KKCLAE KKRLTHFIRQANDLRFAGTTKTTISLFPFFGATFFF RDG          D 
Sbjct: 301 EKKCLAEAKKRLTHFIRQANDLRFAGTTKTTISLFPFFGATFFFPRDGVGVYNNLFFEDA 360

Query: 440 REQLLGQLRIKCWNLMGKEDKVIELIEKFINLGGIGELIKGIVMMIEIILRNRRIPYGYN 499
           REQLLGQLRIKCWNLMGK DKV+ELI+KFI+LGGIGELIKGI MMIEIILRNRRIPYGYN
Sbjct: 361 REQLLGQLRIKCWNLMGK-DKVMELIDKFIDLGGIGELIKGIEMMIEIILRNRRIPYGYN 420

Query: 500 SYLNEVQKMRSLLSNRTKTNTLIVLVKIQSIYQSASPIAQDISF 515
           SYLNEV+KMRSLLSNRT TNTLI  VKI+S+YQSASPIAQDISF
Sbjct: 421 SYLNEVKKMRSLLSNRTNTNTLIESVKIKSVYQSASPIAQDISF 462

[Close]

BLAST of CmoCh13G003010 vs. TrEMBL
Match: A0A0M5LB94_9MAGN (Ribosomal protein S3 OS=Heuchera parviflora var. saurensis GN=rps3 PE=3 SV=1)

HSP 1 Score: 742.7 bits (1916), Expect = 3.1e-211
Identity = 390/466 (83.69%), Postives = 405/466 (86.91%), Query Frame = 1


Query: 80  MARKGNPILVRLDLNH-------------------VNLRSYFGSIRPPTRLTFGFRLGRC 139
           MARKGNPI VRLDLN                    VNLRSYFGSIRPPTRLTFGFRLGRC
Sbjct: 1   MARKGNPISVRLDLNRSSDSSRFSDYYYGKSVYQDVNLRSYFGSIRPPTRLTFGFRLGRC 60

Query: 140 IILHFPKITFIHFFLPRRPRGLKRHAKSKPGKDQG--RWWAFGKVGPIGCLHSSDDTEEE 199
           IILHFPK TFIHFFLPRRPR LKRH KS+PGK +G  RWWAFGKVGPIGCLHSSD TEEE
Sbjct: 61  IILHFPKRTFIHFFLPRRPRRLKRHQKSRPGKKKGKGRWWAFGKVGPIGCLHSSDGTEEE 120

Query: 200 RNKVRGREAEKRVESMIRLDDQEKQNEIRIWPLKKQDYGYHDRSPSRKKNLSKSLCVSGA 259
           RN+VRGR A KRVES IRLDD+EKQNEIRIWP KKQ YGYHDRSPS K NLSKSL VSGA
Sbjct: 121 RNEVRGRGAGKRVES-IRLDDREKQNEIRIWPKKKQRYGYHDRSPSIKNNLSKSLLVSGA 180

Query: 260 FKHPKYAGVVNDIAFLIENDDSFRKTQLFKFFFPNQSRSDGPTSHLLKRTVPAVRPSLNY 319
           FKHPKYAGVVNDIAFLIENDDSFRKT+LFKFFFP +SRSDGPTSHLLKRT+PAVRPSLNY
Sbjct: 181 FKHPKYAGVVNDIAFLIENDDSFRKTKLFKFFFPKKSRSDGPTSHLLKRTLPAVRPSLNY 240

Query: 320 SVMQYLLNTKNKMHFDPVRVLNHFVAPGVAEPSTMGGANTQGRSLDKRIRSRIAFFVESS 379
           SV+QYLLNTKN++HFDPV VLNHFVAPGVAEPSTM G N QGRSLDKRIRSRIAFFVESS
Sbjct: 241 SVIQYLLNTKNQIHFDPVVVLNHFVAPGVAEPSTMVGVNAQGRSLDKRIRSRIAFFVESS 300

Query: 380 TSKKKCLAEPKKRLTHFIRQANDLRFAGTTKTTISLFPFFGATFFFLRDG---------- 439
           TS KKCLAE KKRLTHFIRQANDLRFAGTTKTTISLFPFFGATFFFLRDG          
Sbjct: 301 TSDKKCLAEAKKRLTHFIRQANDLRFAGTTKTTISLFPFFGATFFFLRDGVGVYNNLFFE 360

Query: 440 DTREQLLGQLRIKCWNLMGKEDKVIELIEKFINLGGIGELIKGIVMMIEIILRNRRIPYG 499
             REQLLGQLR KCWNLMGK DKV+ELIEKFI+LGGIGELIKGI MMIEIILRNRRIPYG
Sbjct: 361 YAREQLLGQLRKKCWNLMGK-DKVMELIEKFIDLGGIGELIKGIEMMIEIILRNRRIPYG 420

Query: 500 YNSYLNEVQKMRSLLSNRTKTNTLIVLVKIQSIYQSASPIAQDISF 515
           YNSYLNEV+KMRSLLSNRT TNTLI  VKI+S+YQSASPIAQDISF
Sbjct: 421 YNSYLNEVKKMRSLLSNRTNTNTLIESVKIKSVYQSASPIAQDISF 464

[Close]

BLAST of CmoCh13G003010 vs. TAIR10
Match: ATMG00090.1 (ATMG00090.1 structural constituent of ribosome;protein binding)

HSP 1 Score: 673.3 bits (1736), Expect = 1.2e-193
Identity = 357/462 (77.27%), Postives = 382/462 (82.68%), Query Frame = 1


Query: 80  MARKGNPILVRLDLNH-------------------VNLRSYFGSIRPPTRLTFGFRLGRC 139
           MARKGNPI VRL  N                    VNLRSYFGSIRPPTRLTFGFRLGRC
Sbjct: 1   MARKGNPISVRLGKNRSSDSSRFSEYYYGKFVYQDVNLRSYFGSIRPPTRLTFGFRLGRC 60

Query: 140 IILHFPKITFIHFFLPRRPRGLKRHAKSKPGKDQGRWWA-FGKVGPIGCLHSSDDTEEER 199
           IILHFPK TFIHFFLPRRPR LKR  K++PGK++GRWW  FGK GPI CLHSSDDTEEER
Sbjct: 61  IILHFPKRTFIHFFLPRRPRRLKRREKTRPGKEKGRWWTTFGKAGPIECLHSSDDTEEER 120

Query: 200 NKVRGREAEKRVESMIRLDDQEKQNEIRIWPLKKQDYGYHDRSPSRKKNLSKSLCVSGAF 259
           N+VRGR A KRVES IRLDD++KQNEIR WP KKQ YGYHDR PS KKNLSKSL +SGAF
Sbjct: 121 NEVRGRGARKRVES-IRLDDRKKQNEIRGWPKKKQRYGYHDRLPSIKKNLSKSLRISGAF 180

Query: 260 KHPKYAGVVNDIAFLIENDDSFRKTQLFKFFFPNQSRSDGPTSHLLKRTVPAVRPSLNYS 319
           KHPKYAGVVNDIAFLIENDDSF+KT+LFK FF N+SRSDGPTS+L  RT+PAVRPSLN+ 
Sbjct: 181 KHPKYAGVVNDIAFLIENDDSFKKTKLFKLFFQNKSRSDGPTSYL--RTLPAVRPSLNFL 240

Query: 320 VMQYLLNTKNKMHFDPVRVLNHFVAPGVAEPSTMGGANTQGRSLDKRIRSRIAFFVESST 379
           VMQY  NTKN+++FDPV VLNHFVAPG AEPSTMG AN QGRSL KRIRSRIAFFVESST
Sbjct: 241 VMQYFFNTKNQINFDPVVVLNHFVAPGAAEPSTMGRANAQGRSLQKRIRSRIAFFVESST 300

Query: 380 SKKKCLAEPKKRLTHFIRQANDLRFAGTTKTTISLFPFFGATFFFLRDG-------DTRE 439
           S+KKCLAE K RLTHFIR ANDLRFAGTTKTTISLFPFFGATFFFLRDG       D RE
Sbjct: 301 SEKKCLAEAKNRLTHFIRLANDLRFAGTTKTTISLFPFFGATFFFLRDGVGVYNNLDARE 360

Query: 440 QLLGQLRIKCWNLMGKEDKVIELIEKFINLGGIGELIKGIVMMIEIILRNRRIPYGYNSY 499
           QLL QLR+KCWNL+GK DK++ELIEK  NLGGI ELIK I MMIEIILR R IPY YNSY
Sbjct: 361 QLLNQLRVKCWNLVGK-DKIMELIEKLKNLGGIEELIKVIDMMIEIILRKRGIPYRYNSY 420

Query: 500 LNEVQKMRSLLSNRTKTNTLIVLVKIQSIYQSASPIAQDISF 515
             EV+KMRS LSNRT T TLI  VKI+S+YQSASPIAQDISF
Sbjct: 421 FYEVKKMRSFLSNRTNTKTLIESVKIKSVYQSASPIAQDISF 458

[Close]

BLAST of CmoCh13G003010 vs. TAIR10
Match: AT5G47320.1 (AT5G47320.1 ribosomal protein S19)

HSP 1 Score: 100.5 bits (249), Expect = 3.1e-21
Identity = 46/59 (77.97%), Postives = 54/59 (91.53%), Query Frame = 1


Query: 1   MKKKRDPFLNRKIWSRRSSILPEFVDSSIRIYNGKTSVRCKITEGRVGHKFGEFASTRK 60
           + KK++  LNRKIWSRRS+ILPE+VDS++RIYNGKT VRCKITEG+VGHKFGEFA TRK
Sbjct: 146 LMKKKNAALNRKIWSRRSTILPEYVDSAVRIYNGKTHVRCKITEGKVGHKFGEFAFTRK 204

[Close]

BLAST of CmoCh13G003010 vs. TAIR10
Match: ATMG00690.1 (ATMG00690.1 hypothetical protein)

HSP 1 Score: 50.8 bits (120), Expect = 2.8e-06
Identity = 33/52 (63.46%), Postives = 39/52 (75.00%), Query Frame = 1


Query: 56  STRKRRLSRTNIGPG-KKGEK-VKA-HMARKGNPILVRLDLNHVNLRSYFGS 105
           STRK RLSRTNI PG KKG+K +K+ +MARKGNPILVRL  N  +  S F +
Sbjct: 19  STRKLRLSRTNIVPGRKKGQKSIKSKNMARKGNPILVRLGKNRSSDSSRFSA 70

[Close]

BLAST of CmoCh13G003010 vs. NCBI nr
Match: gi|295311706|ref|YP_003587365.1| (ribosomal protein S3 [Cucurbita pepo])

HSP 1 Score: 809.7 bits (2090), Expect = 3.0e-231
Identity = 416/464 (89.66%), Postives = 421/464 (90.73%), Query Frame = 1


Query: 80  MARKGNPILVRLDLNH-------------------VNLRSYFGSIRPPTRLTFGFRLGRC 139
           MARKGNPI VRLDLN                    VNLRSYFGSIRPPTRLTFGFRLGRC
Sbjct: 1   MARKGNPISVRLDLNRSSDSSWFSDYYYGKLLYQDVNLRSYFGSIRPPTRLTFGFRLGRC 60

Query: 140 IILHFPKITFIHFFLPRRPRGLKRHAKSKPGKDQGRWWAFGKVGPIGCLHSSDDTEEERN 199
           IILHFPKITFIHFFLPRRPRGLKR AKSKPGKDQGRWWAFGKVGPIGCLHSSDDTEEERN
Sbjct: 61  IILHFPKITFIHFFLPRRPRGLKRRAKSKPGKDQGRWWAFGKVGPIGCLHSSDDTEEERN 120

Query: 200 KVRGREAEKRVESMIRLDDQEKQNEIRIWPLKKQDYGYHDRSPSRKKNLSKSLCVSGAFK 259
           KVRGREAEKRVESMIRLDD+EKQNEIRIWP KKQDYGYHDRSPSRKKNLSK L VSGAFK
Sbjct: 121 KVRGREAEKRVESMIRLDDREKQNEIRIWPKKKQDYGYHDRSPSRKKNLSKLLRVSGAFK 180

Query: 260 HPKYAGVVNDIAFLIENDDSFRKTQLFKFFFPNQSRSDGPTSHLLKRTVPAVRPSLNYSV 319
           HPKYAGVVNDIAFLIENDDSFRKTQLFKFFFPNQSRSDGPTSHLLKRT+PAVRPSLNY V
Sbjct: 181 HPKYAGVVNDIAFLIENDDSFRKTQLFKFFFPNQSRSDGPTSHLLKRTLPAVRPSLNYLV 240

Query: 320 MQYLLNTKNKMHFDPVRVLNHFVAPGVAEPSTMGGANTQGRSLDKRIRSRIAFFVESSTS 379
           MQYLLNTKNKMHFDPV VLNHFVAPGVAEPSTMGGANTQGRSLDKRIRSRIAFFVES TS
Sbjct: 241 MQYLLNTKNKMHFDPVGVLNHFVAPGVAEPSTMGGANTQGRSLDKRIRSRIAFFVESLTS 300

Query: 380 KKKCLAEPKKRLTHFIRQANDLRFAGTTKTTISLFPFFGATFFFLRDG----------DT 439
           +KKCLAEPKKRLTHFIRQANDLRFAGTTKTTISLFPFFGATFFF RDG          DT
Sbjct: 301 EKKCLAEPKKRLTHFIRQANDLRFAGTTKTTISLFPFFGATFFFPRDGVGMYKNLFFEDT 360

Query: 440 REQLLGQLRIKCWNLMGKEDKVIELIEKFINLGGIGELIKGIVMMIEIILRNRRIPYGYN 499
           REQLLGQLRIKCWNLMGKEDKVIELIEKFI+LGGIGELIKGI MMIEIILRNRRIPYGYN
Sbjct: 361 REQLLGQLRIKCWNLMGKEDKVIELIEKFIDLGGIGELIKGIEMMIEIILRNRRIPYGYN 420

Query: 500 SYLNEVQKMRSLLSNRTKTNTLIVLVKIQSIYQSASPIAQDISF 515
           SYLNEVQKMRSLLSNRTKTNTLI  VKIQS+YQSAS IAQDISF
Sbjct: 421 SYLNEVQKMRSLLSNRTKTNTLIESVKIQSVYQSASLIAQDISF 464

[Close]

BLAST of CmoCh13G003010 vs. NCBI nr
Match: gi|295311662|ref|YP_003587231.1| (ribosomal protein S3 [Citrullus lanatus])

HSP 1 Score: 766.1 bits (1977), Expect = 3.8e-218
Identity = 400/464 (86.21%), Postives = 412/464 (88.79%), Query Frame = 1


Query: 80  MARKGNPILVRLDLNH-------------------VNLRSYFGSIRPPTRLTFGFRLGRC 139
           MARKGNPI VRLDLN                    VNLRSYFGSIRPPTRLTFGFRLGRC
Sbjct: 1   MARKGNPISVRLDLNRSSDSSWFSDYYYGKLLYQDVNLRSYFGSIRPPTRLTFGFRLGRC 60

Query: 140 IILHFPKITFIHFFLPRRPRGLKRHAKSKPGKDQGRWWAFGKVGPIGCLHSSDDTEEERN 199
           IILHFPK TFIHFFLPRRPR LKR  KSKPGK++GRWWAFGKVGPIGCLHSSDDTEEERN
Sbjct: 61  IILHFPKRTFIHFFLPRRPRRLKRREKSKPGKEKGRWWAFGKVGPIGCLHSSDDTEEERN 120

Query: 200 KVRGREAEKRVESMIRLDDQEKQNEIRIWPLKKQDYGYHDRSPSRKKNLSKSLCVSGAFK 259
           +VRGREAEKRVES IRLDD+EKQNEIRIWP KKQ YGYHDRSPS KKNLSK L VSGAFK
Sbjct: 121 EVRGREAEKRVES-IRLDDREKQNEIRIWPKKKQRYGYHDRSPSIKKNLSKLLRVSGAFK 180

Query: 260 HPKYAGVVNDIAFLIENDDSFRKTQLFKFFFPNQSRSDGPTSHLLKRTVPAVRPSLNYSV 319
           HPKYAGVVNDIAFLIENDDSFRKT+LFKFFFP +SRSDGPTSHLLKRT+PAVRPSLNY V
Sbjct: 181 HPKYAGVVNDIAFLIENDDSFRKTKLFKFFFPKKSRSDGPTSHLLKRTLPAVRPSLNYLV 240

Query: 320 MQYLLNTKNKMHFDPVRVLNHFVAPGVAEPSTMGGANTQGRSLDKRIRSRIAFFVESSTS 379
           MQYLLNTKNKMHFDPV VLNHFVAPGVAEPSTMGGANTQGRSLDKRIRSRIAFFVES TS
Sbjct: 241 MQYLLNTKNKMHFDPVVVLNHFVAPGVAEPSTMGGANTQGRSLDKRIRSRIAFFVESLTS 300

Query: 380 KKKCLAEPKKRLTHFIRQANDLRFAGTTKTTISLFPFFGATFFFLRDG----------DT 439
           +KKCLAE KKRLTHFIRQANDLRFAGTTKTTISLFPFFGATFFF RDG          DT
Sbjct: 301 EKKCLAEAKKRLTHFIRQANDLRFAGTTKTTISLFPFFGATFFFPRDGVGMYKNLFFEDT 360

Query: 440 REQLLGQLRIKCWNLMGKEDKVIELIEKFINLGGIGELIKGIVMMIEIILRNRRIPYGYN 499
           REQLLGQLRIKCWNLMGK DKVIELIEKFI+LGGIGELIKGI MMIEIILRNRRIPYGYN
Sbjct: 361 REQLLGQLRIKCWNLMGK-DKVIELIEKFIDLGGIGELIKGIEMMIEIILRNRRIPYGYN 420

Query: 500 SYLNEVQKMRSLLSNRTKTNTLIVLVKIQSIYQSASPIAQDISF 515
           SYLNEV+KMRSLLSNRTKTNTLI  VKI+S+YQSAS IAQDISF
Sbjct: 421 SYLNEVKKMRSLLSNRTKTNTLIESVKIKSVYQSASLIAQDISF 462

[Close]

BLAST of CmoCh13G003010 vs. NCBI nr
Match: gi|302748681|gb|ADL63821.1| (ribosomal protein S3, partial (mitochondrion) [Cucurbita pepo])

HSP 1 Score: 765.8 bits (1976), Expect = 4.9e-218
Identity = 387/410 (94.39%), Postives = 392/410 (95.61%), Query Frame = 1


Query: 115 FRLGRCIILHFPKITFIHFFLPRRPRGLKRHAKSKPGKDQGRWWAFGKVGPIGCLHSSDD 174
           FRLGRCIILHFPKITFIHFFLPRRPRGLKR AKSKPGKDQGRWWAFGKVGPIGCLHSSDD
Sbjct: 1   FRLGRCIILHFPKITFIHFFLPRRPRGLKRRAKSKPGKDQGRWWAFGKVGPIGCLHSSDD 60

Query: 175 TEEERNKVRGREAEKRVESMIRLDDQEKQNEIRIWPLKKQDYGYHDRSPSRKKNLSKSLC 234
           TEEERNKVRGREAEKRVESMIRLDD+EKQNEIRIWP KKQDYGYHDRSPSRKKNLSKSL 
Sbjct: 61  TEEERNKVRGREAEKRVESMIRLDDREKQNEIRIWPKKKQDYGYHDRSPSRKKNLSKSLR 120

Query: 235 VSGAFKHPKYAGVVNDIAFLIENDDSFRKTQLFKFFFPNQSRSDGPTSHLLKRTVPAVRP 294
           VSGAFKHPKYAGVVNDIAFLIENDDSFRKTQLFKFFFPNQSRSDGPTSHLLKRT+PAVRP
Sbjct: 121 VSGAFKHPKYAGVVNDIAFLIENDDSFRKTQLFKFFFPNQSRSDGPTSHLLKRTLPAVRP 180

Query: 295 SLNYSVMQYLLNTKNKMHFDPVRVLNHFVAPGVAEPSTMGGANTQGRSLDKRIRSRIAFF 354
           SLNYSVMQYLLNTKNKMHFDPV VLNHFVAPGVAEPSTMGGANTQGRSLDKRIRSRIAFF
Sbjct: 181 SLNYSVMQYLLNTKNKMHFDPVGVLNHFVAPGVAEPSTMGGANTQGRSLDKRIRSRIAFF 240

Query: 355 VESSTSKKKCLAEPKKRLTHFIRQANDLRFAGTTKTTISLFPFFGATFFFLRDG------ 414
           VESSTS+KKCLAEPKKRLTHFIRQANDLRFAGTTKTTISLFPFFGATFFF RDG      
Sbjct: 241 VESSTSEKKCLAEPKKRLTHFIRQANDLRFAGTTKTTISLFPFFGATFFFPRDGVGMYKN 300

Query: 415 ----DTREQLLGQLRIKCWNLMGKEDKVIELIEKFINLGGIGELIKGIVMMIEIILRNRR 474
               DTREQLLGQLRIKCWNLMGKEDKVIELIEKFI+LGGIGELIKGI MMIEIILRNRR
Sbjct: 301 LFFEDTREQLLGQLRIKCWNLMGKEDKVIELIEKFIDLGGIGELIKGIEMMIEIILRNRR 360

Query: 475 IPYGYNSYLNEVQKMRSLLSNRTKTNTLIVLVKIQSIYQSASPIAQDISF 515
           IPYGYNSYLNEVQKMRSLLSNRTKTNTLI  VKIQS+YQSASPIAQDISF
Sbjct: 361 IPYGYNSYLNEVQKMRSLLSNRTKTNTLIESVKIQSVYQSASPIAQDISF 410

[Close]

BLAST of CmoCh13G003010 vs. NCBI nr
Match: gi|224365643|ref|YP_002608370.1| (ribosomal protein S3 [Vitis vinifera])

HSP 1 Score: 745.3 bits (1923), Expect = 6.9e-212
Identity = 388/464 (83.62%), Postives = 407/464 (87.72%), Query Frame = 1


Query: 80  MARKGNPILVRLDLNH-------------------VNLRSYFGSIRPPTRLTFGFRLGRC 139
           MARKGNPI VRLDLN                    VNLRSYFGSIRPPTRLTFGFRLGRC
Sbjct: 1   MARKGNPISVRLDLNRSSDSSWFSDYYYGKSVYQDVNLRSYFGSIRPPTRLTFGFRLGRC 60

Query: 140 IILHFPKITFIHFFLPRRPRGLKRHAKSKPGKDQGRWWAFGKVGPIGCLHSSDDTEEERN 199
           IILHFPK TFIHFFLPRRPRGLKR  KS+PGK++GRWWAFGKVGPIGCLHSSD TEEERN
Sbjct: 61  IILHFPKRTFIHFFLPRRPRGLKRREKSRPGKEKGRWWAFGKVGPIGCLHSSDGTEEERN 120

Query: 200 KVRGREAEKRVESMIRLDDQEKQNEIRIWPLKKQDYGYHDRSPSRKKNLSKSLCVSGAFK 259
           +VRGR A KRVES IRLDD+EKQNE RIWP KKQ YGYHD+SPS KKNLSK L VSGAFK
Sbjct: 121 EVRGRGAGKRVES-IRLDDREKQNERRIWPKKKQRYGYHDQSPSIKKNLSKLLRVSGAFK 180

Query: 260 HPKYAGVVNDIAFLIENDDSFRKTQLFKFFFPNQSRSDGPTSHLLKRTVPAVRPSLNYSV 319
           H KYAGVVNDIAFLIENDDSFRKT+LFKFFFP +SRSDGPTSH+LKRT+PAVRPSLNYSV
Sbjct: 181 HLKYAGVVNDIAFLIENDDSFRKTKLFKFFFPKKSRSDGPTSHILKRTLPAVRPSLNYSV 240

Query: 320 MQYLLNTKNKMHFDPVRVLNHFVAPGVAEPSTMGGANTQGRSLDKRIRSRIAFFVESSTS 379
           MQYLLNTKN++HFD V VLNHFVAPGVAEPSTMGGAN QGRSLDKRIRSRIAFFVESSTS
Sbjct: 241 MQYLLNTKNQIHFDSVVVLNHFVAPGVAEPSTMGGANAQGRSLDKRIRSRIAFFVESSTS 300

Query: 380 KKKCLAEPKKRLTHFIRQANDLRFAGTTKTTISLFPFFGATFFFLRDG----------DT 439
           +KKCLAE KKRLTHFIRQANDLRFAGTTKTTISLFPFFGATFFF RDG          D 
Sbjct: 301 EKKCLAEAKKRLTHFIRQANDLRFAGTTKTTISLFPFFGATFFFPRDGVGVYNNLFFEDA 360

Query: 440 REQLLGQLRIKCWNLMGKEDKVIELIEKFINLGGIGELIKGIVMMIEIILRNRRIPYGYN 499
           REQLLGQLRIKCWNLMGK DKV+ELI+KFI+LGGIGELIKGI MMIEIILRNRRIPYGYN
Sbjct: 361 REQLLGQLRIKCWNLMGK-DKVMELIDKFIDLGGIGELIKGIEMMIEIILRNRRIPYGYN 420

Query: 500 SYLNEVQKMRSLLSNRTKTNTLIVLVKIQSIYQSASPIAQDISF 515
           SYLNEV+KMRSLLSNRT TNTLI  VKI+S+YQSASPIAQDISF
Sbjct: 421 SYLNEVKKMRSLLSNRTNTNTLIESVKIKSVYQSASPIAQDISF 462

[Close]

BLAST of CmoCh13G003010 vs. NCBI nr
Match: gi|927682191|gb|ALE29203.1| (ribosomal protein S3 (mitochondrion) [Heuchera parviflora var. saurensis])

HSP 1 Score: 742.7 bits (1916), Expect = 4.5e-211
Identity = 390/466 (83.69%), Postives = 405/466 (86.91%), Query Frame = 1


Query: 80  MARKGNPILVRLDLNH-------------------VNLRSYFGSIRPPTRLTFGFRLGRC 139
           MARKGNPI VRLDLN                    VNLRSYFGSIRPPTRLTFGFRLGRC
Sbjct: 1   MARKGNPISVRLDLNRSSDSSRFSDYYYGKSVYQDVNLRSYFGSIRPPTRLTFGFRLGRC 60

Query: 140 IILHFPKITFIHFFLPRRPRGLKRHAKSKPGKDQG--RWWAFGKVGPIGCLHSSDDTEEE 199
           IILHFPK TFIHFFLPRRPR LKRH KS+PGK +G  RWWAFGKVGPIGCLHSSD TEEE
Sbjct: 61  IILHFPKRTFIHFFLPRRPRRLKRHQKSRPGKKKGKGRWWAFGKVGPIGCLHSSDGTEEE 120

Query: 200 RNKVRGREAEKRVESMIRLDDQEKQNEIRIWPLKKQDYGYHDRSPSRKKNLSKSLCVSGA 259
           RN+VRGR A KRVES IRLDD+EKQNEIRIWP KKQ YGYHDRSPS K NLSKSL VSGA
Sbjct: 121 RNEVRGRGAGKRVES-IRLDDREKQNEIRIWPKKKQRYGYHDRSPSIKNNLSKSLLVSGA 180

Query: 260 FKHPKYAGVVNDIAFLIENDDSFRKTQLFKFFFPNQSRSDGPTSHLLKRTVPAVRPSLNY 319
           FKHPKYAGVVNDIAFLIENDDSFRKT+LFKFFFP +SRSDGPTSHLLKRT+PAVRPSLNY
Sbjct: 181 FKHPKYAGVVNDIAFLIENDDSFRKTKLFKFFFPKKSRSDGPTSHLLKRTLPAVRPSLNY 240

Query: 320 SVMQYLLNTKNKMHFDPVRVLNHFVAPGVAEPSTMGGANTQGRSLDKRIRSRIAFFVESS 379
           SV+QYLLNTKN++HFDPV VLNHFVAPGVAEPSTM G N QGRSLDKRIRSRIAFFVESS
Sbjct: 241 SVIQYLLNTKNQIHFDPVVVLNHFVAPGVAEPSTMVGVNAQGRSLDKRIRSRIAFFVESS 300

Query: 380 TSKKKCLAEPKKRLTHFIRQANDLRFAGTTKTTISLFPFFGATFFFLRDG---------- 439
           TS KKCLAE KKRLTHFIRQANDLRFAGTTKTTISLFPFFGATFFFLRDG          
Sbjct: 301 TSDKKCLAEAKKRLTHFIRQANDLRFAGTTKTTISLFPFFGATFFFLRDGVGVYNNLFFE 360

Query: 440 DTREQLLGQLRIKCWNLMGKEDKVIELIEKFINLGGIGELIKGIVMMIEIILRNRRIPYG 499
             REQLLGQLR KCWNLMGK DKV+ELIEKFI+LGGIGELIKGI MMIEIILRNRRIPYG
Sbjct: 361 YAREQLLGQLRKKCWNLMGK-DKVMELIEKFIDLGGIGELIKGIEMMIEIILRNRRIPYG 420

Query: 500 YNSYLNEVQKMRSLLSNRTKTNTLIVLVKIQSIYQSASPIAQDISF 515
           YNSYLNEV+KMRSLLSNRT TNTLI  VKI+S+YQSASPIAQDISF
Sbjct: 421 YNSYLNEVKKMRSLLSNRTNTNTLIESVKIKSVYQSASPIAQDISF 464

The following BLAST results are available for this feature:

BLAST of CmoCh13G003010 vs. Swiss-Prot


Match Name	E-value	Identity	Description
RT03_OENBE	6.0e-208	81.68	Ribosomal protein S3, mitochondrial OS=Oenothera berteroana GN=RPS3 PE=3 SV=2	[more]
RT03_PETHY	1.3e-207	82.07	Ribosomal protein S3, mitochondrial OS=Petunia hybrida GN=YRPS3 PE=2 SV=1	[more]
RT03_MAIZE	4.6e-200	80.43	Ribosomal protein S3, mitochondrial OS=Zea mays GN=RPS3 PE=3 SV=1	[more]
RT03_ARATH	7.4e-190	76.62	Ribosomal protein S3, mitochondrial OS=Arabidopsis thaliana GN=RPS3 PE=2 SV=3	[more]
RT03_BRANA	3.4e-187	76.46	Ribosomal protein S3, mitochondrial OS=Brassica napus GN=RPS3 PE=3 SV=1	[more]

BLAST of CmoCh13G003010 vs. TrEMBL


Match Name	E-value	Identity	Description
D5I3F1_CUCPE	2.1e-231	89.66	Ribosomal protein S3 OS=Cucurbita pepo GN=rps3 PE=3 SV=1	[more]
D5I3A1_CITLA	2.6e-218	86.21	Ribosomal protein S3 OS=Citrullus lanatus GN=rps3 PE=3 SV=1	[more]
E5DM03_CUCPE	3.4e-218	94.39	Ribosomal protein S3 (Fragment) OS=Cucurbita pepo GN=rps3 PE=3 SV=1	[more]
B6VJV8_VITVI	4.8e-212	83.62	Ribosomal protein S3 OS=Vitis vinifera GN=rps3 PE=3 SV=1	[more]
A0A0M5LB94_9MAGN	3.1e-211	83.69	Ribosomal protein S3 OS=Heuchera parviflora var. saurensis GN=rps3 PE=3 SV=1	[more]

BLAST of CmoCh13G003010 vs. TAIR10


Match Name	E-value	Identity	Description
ATMG00090.1	1.2e-193	77.27	ATMG00090.1 structural constituent of ribosome;protein binding	[more]
AT5G47320.1	3.1e-21	77.97	ribosomal protein S19	[more]
ATMG00690.1	2.8e-06	63.46	ATMG00690.1 hypothetical protein	[more]

BLAST of CmoCh13G003010 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|295311706\|ref\|YP_003587365.1\|	3.0e-231	89.66	ribosomal protein S3 [Cucurbita pepo]	[more]
gi\|295311662\|ref\|YP_003587231.1\|	3.8e-218	86.21	ribosomal protein S3 [Citrullus lanatus]	[more]
gi\|302748681\|gb\|ADL63821.1\|	4.9e-218	94.39	ribosomal protein S3, partial (mitochondrion) [Cucurbita pepo]	[more]
gi\|224365643\|ref\|YP_002608370.1\|	6.9e-212	83.62	ribosomal protein S3 [Vitis vinifera]	[more]
gi\|927682191\|gb\|ALE29203.1\|	4.5e-211	83.69	ribosomal protein S3 (mitochondrion) [Heuchera parviflora var. saurensis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR002222	Ribosomal_S19
IPR020934	Ribosomal_S19_CS
IPR023575	Ribosomal_S19_SF

Vocabulary: **Molecular Function**
Term	Definition
GO:0003735	structural constituent of ribosome
GO:0003723	RNA binding

Vocabulary: **Cellular Component**
Term	Definition
GO:0005840	ribosome

Vocabulary: **Biological Process**
Term	Definition
GO:0006412	translation

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0042254	ribosome biogenesis
biological_process	GO:0006412	translation
cellular_component	GO:0005739	mitochondrion
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003735	structural constituent of ribosome

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh13G003010.1	CmoCh13G003010.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002222	Ribosomal protein S19/S15	PRINTS	PR00975	RIBOSOMALS19	coord: 13..32 score: 3.6E-12coord: 33..45 score: 3.6E-12coord: 45..60 score: 3.6
IPR002222	Ribosomal protein S19/S15	HAMAP	MF_00531	Ribosomal_S19	coord: 1..72 score:
IPR002222	Ribosomal protein S19/S15	PFAM	PF00203	Ribosomal_S19	coord: 12..60 score: 7.0
IPR020934	Ribosomal protein S19 conserved site	PROSITE	PS00323	RIBOSOMAL_S19	coord: 33..57 scor
IPR023575	Ribosomal protein S19, superfamily	GENE3D	G3DSA:3.30.860.10		coord: 10..62 score: 2.5
IPR023575	Ribosomal protein S19, superfamily	unknown	SSF54570	Ribosomal protein S19	coord: 11..60 score: 5.1
None	No IPR available	PANTHER	PTHR35928	FAMILY NOT NAMED	coord: 163..498 score: 2.0E
None	No IPR available	PANTHER	PTHR35928:SF1	SUBFAMILY NOT NAMED	coord: 163..498 score: 2.0E

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmoCh13G003010	CmoCh12G007910	Cucurbita moschata (Rifu)	cmocmoB135

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh13G003010	Cucumber (Gy14) v2	cgybcmoB057
CmoCh13G003010	Melon (DHL92) v3.6.1	cmomedB203
CmoCh13G003010	Cucumber (Chinese Long) v3	cmocucB0221
CmoCh13G003010	Watermelon (97103) v2	cmowmbB198
CmoCh13G003010	Wax gourd	cmowgoB0259
CmoCh13G003010	Cucumber (Gy14) v1	cgycmoB0594
CmoCh13G003010	Cucurbita maxima (Rimu)	cmacmoB179
CmoCh13G003010	Cucurbita maxima (Rimu)	cmacmoB218
CmoCh13G003010	Wild cucumber (PI 183967)	cmocpiB192
CmoCh13G003010	Cucumber (Chinese Long) v2	cmocuB188
CmoCh13G003010	Watermelon (Charleston Gray)	cmowcgB179
CmoCh13G003010	Watermelon (97103) v1	cmowmB186
CmoCh13G003010	Cucurbita pepo (Zucchini)	cmocpeB200
CmoCh13G003010	Bottle gourd (USVL1VR-Ls)	cmolsiB203