CmoCh13G000900 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh13G000900
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Mitochondrial import inner membrane translocase subunit Tim10
Location	Cmo_Chr13 : 538211 .. 540687 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGGGATTTAGCAGCGGGGTTTTGCCTTCTCTGTCAACTACTGATCTGATTCATCGAATCCATCAAAAGACTGAGCTACGATCTTGAAATTTTCCATTGGCAGTTCATTCGAAGTGAGTTTGTATCGATTGTCATTTCCATTTGTTCTAAATAAATTGTTCCTTTTTGGTGGGTTATTGAGTTTTGGGATTGTGATTTTGTTTGATTCAGAATCTCAATGGCTTCTCCGAACGATATGCAATCGGCTATGGACAAGGAACAGGTTGGTTTCTATGTCTTTATTCGATTTTTCCTCGTTTTTGCAAATTCATAGCCGTGATTTGGGATTCTAGTATTTGAATCTGTGCCTTATTCTTGTGGATTTTTCTAAATTGGACAAATATAACTGTTAGGGCTCGAAAGAGAGAGATAGAGGATGAATGTATGACGAAATTTTCTATTTGTTACTGGAATCTGTCCATTTAGAGCGATTGATATGTTCAATTTATTAGATTTTGATGAATTTTACCATGTAGATATAATTTAAATGTACTTCGTAAATTCATAATTATTAACACAAACTAATTTCAATTTTTTTGCATTGGAGCAGATATTTGGTATGGCAGAAAAGGAGATGGAATATCGAGTTGAATTGTTCAACAAGTAGGTTTTATTACACTTTTTAATGAAAATATTTGGGAAATGAGAGATATATAGAAAAGGAGATGGTGAAAGATTTTATGTGTGTTTCTACCTTCTTCATAGATTTGGCCTGATGCCTTTGTCTTCTTTTTTTTTCTTTCAGGCTTACACAATCATGTTTTAACAAATGTGTTGATAAGAGGTAGGAGAATTGTCCTGCATTTCTATCTCTGAATATTAAGCTGTAGTTATGTATGGTCTTTTGTCTTTTAACAATTACTTTCTATTTTAGGTACAAGGAATCTGAGCTGAATATGGGTGAAAATAGTTGTATTGACCGCTGTGTTTCCAAGTATTGGCATGTAAGCTCATCTTTCTCTTCTATTCTCTGTATTTCTTTTAGTTTATGAGATATGCAGTGATCAAATAGTACAACAGCACTTGTTTTCCATCTCATAAAAATTTAACCACATTCCATCACGATTGAAAGCTCAAAATCGTGTTGTCCTTATTCATATATCATGTTTAAATAAAATCTTTGTAGTTTTTTGAAGGAAATTTAAATGAAACCATGTGTTTTGTTGTCTGCTTACTATCTTCAAATGAACTCTTGTTATGGGTATGGTAGAATCAATCATATTTGATTTTGAGATATGGATGTGCATTTGATAAACGAGTTCAGATGTTTTCTGATAAAGCATAAGCCATTGGTAGATTCATCTGATTATGAGCTTGAATTTTCTTTTTGACTTCAACAACGAGTGAGGTTGGGAGAATCGAACCTCAAACCTCTTGGTTTGGGATATATGCTTAAACCAATTATGCTCAGGTTGACACGAGCTTAGGACTACTCTCTCCTTGCATTCCAAAATATAGAAATTTTATACAGCTGTGTCCAAATTTCTAACTAGGCGATGAAACTCTTGTATAGATCAATTGGCTTGCATTTGATTGTGAATCTACATTTCATAATTCGAGAGTACACATAGGAGATACGTTGAGAATATTAATCGGATAATATTACGGCATAGTGGCAATTAGACAGGGGTGACTTGTCCGAGGTTGGGCTTTGGGAGAGAGATGGCCCTCTCGAAAGGCTACTAATATTGTACTTTATCTTTCGATATTGGAATACAATTCTATTGTGTTTCATGTTATGGGGATTCTAGCGAATGATTAGGTGCATTGTGAGATCTCACATCGATTGGAGAGAGGAACGAGTGCCAACGAGGACGTTGGACTCCGAAAGGAGGTGGATTGTGAGATTCCATATCGGTTGGAGAGGGGAACAAAGCATTCTTTATAAGGGTGTGGAAACCTCTCCCTAGTAGATGCGTTTTAAATACCTTGAGGGAAAACCCGAAAGAGGCGGTTGGCTTTGATTGTTACAACTTACATGGTCTATGGGACTCTTGATGGCCACAGTTTTCACTACTAACTTAAGGATGATTCCTTCAACATAATTTTAAATTCTTTCCTCCCTATCTCAAAAGATATTCACTTCTTCGATTAGCTTATTTACGATACAACAATATCTTTGCATGAACTTGTATCATCTGTTTTTGTTGACTACTTGAGTCCATTCTACTGATGAAGTTTTTGAATTCAACTCTGGTATTGATTCTTAGTTTGCTGTGTTTCAGGTAACTAATTTAGTCGGCCAGCTACTCGGGTCGGGTAGACCTCCTATGTGAGCTGATTCTTGATCTGAGTAATTGTTTGGTGAGTTGGGAATGAAGAACTATGAATTATGCATTTTTGGCCTGTTTAATTCTCCCATCTCATGAAATACTTTGTTTTTCTGTTCGAGAAGGCATTGATAATGGCATTATTTCATCTATAAGTGTGATGTGATTA

mRNA sequence

AGGGATTTAGCAGCGGGGTTTTGCCTTCTCTGTCAACTACTGATCTGATTCATCGAATCCATCAAAAGACTGAGCTACGATCTTGAAATTTTCCATTGGCAGTTCATTCGAAAATCTCAATGGCTTCTCCGAACGATATGCAATCGGCTATGGACAAGGAACAGATATTTGGTATGGCAGAAAAGGAGATGGAATATCGAGTTGAATTGTTCAACAAGCTTACACAATCATGTTTTAACAAATGTGTTGATAAGAGGTACAAGGAATCTGAGCTGAATATGGGTGAAAATAGTTGTATTGACCGCTGTGTTTCCAAGTATTGGCATGTAACTAATTTAGTCGGCCAGCTACTCGGGTCGGGTAGACCTCCTATGTGAGCTGATTCTTGATCTGAGTAATTGTTTGGTGAGTTGGGAATGAAGAACTATGAATTATGCATTTTTGGCCTGTTTAATTCTCCCATCTCATGAAATACTTTGTTTTTCTGTTCGAGAAGGCATTGATAATGGCATTATTTCATCTATAAGTGTGATGTGATTA

Coding sequence (CDS)

ATGGCTTCTCCGAACGATATGCAATCGGCTATGGACAAGGAACAGATATTTGGTATGGCAGAAAAGGAGATGGAATATCGAGTTGAATTGTTCAACAAGCTTACACAATCATGTTTTAACAAATGTGTTGATAAGAGGTACAAGGAATCTGAGCTGAATATGGGTGAAAATAGTTGTATTGACCGCTGTGTTTCCAAGTATTGGCATGTAACTAATTTAGTCGGCCAGCTACTCGGGTCGGGTAGACCTCCTATGTGA

Homology

[Close]

BLAST of CmoCh13G000900 vs. Swiss-Prot
Match: TIM10_ARATH (Mitochondrial import inner membrane translocase subunit TIM10 OS=Arabidopsis thaliana GN=TIM10 PE=1 SV=1)

HSP 1 Score: 133.3 bits (334), Expect = 1.3e-30
Identity = 62/85 (72.94%), Postives = 71/85 (83.53%), Query Frame = 1


Query: 1  MASPNDMQSAMDKEQIFGMAEKEMEYRVELFNKLTQSCFNKCVDKRYKESELNMGENSCI 60
          MASP  +   + KEQ F MA+ EMEYRVELFNKL Q+CFNKCVDKRYKE+ELNMGENSCI
Sbjct: 1  MASP--IPVGVTKEQAFSMAQTEMEYRVELFNKLAQTCFNKCVDKRYKEAELNMGENSCI 60

Query: 61 DRCVSKYWHVTNLVGQLLGSGRPPM 86
          DRCVSKYW V  +VGQLL +G+PP+
Sbjct: 61 DRCVSKYWQVNGMVGQLLSAGKPPV 83

[Close]

BLAST of CmoCh13G000900 vs. Swiss-Prot
Match: TIM10_YEAST (Mitochondrial import inner membrane translocase subunit TIM10 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TIM10 PE=1 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 5.1e-11
Identity = 28/69 (40.58%), Postives = 43/69 (62.32%), Query Frame = 1


Query: 8  QSAMDKEQIFGMAEKEMEYRVELFNKLTQSCFNKCVDKRYKESELNMGENSCIDRCVSKY 67
          Q  +  +Q    AE E++   ++FNKL  +C+ KC++  Y E ELN  E+SC+DRCV+KY
Sbjct: 10 QPQLSSQQKIQAAEAELDLVTDMFNKLVNNCYKKCINTSYSEGELNKNESSCLDRCVAKY 69

Query: 68 WHVTNLVGQ 77
          +     VG+
Sbjct: 70 FETNVQVGE 78

[Close]

BLAST of CmoCh13G000900 vs. Swiss-Prot
Match: TIM10_ASHGO (Mitochondrial import inner membrane translocase subunit TIM10 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=TIM10 PE=3 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 8.6e-11
Identity = 27/69 (39.13%), Postives = 42/69 (60.87%), Query Frame = 1


Query: 8  QSAMDKEQIFGMAEKEMEYRVELFNKLTQSCFNKCVDKRYKESELNMGENSCIDRCVSKY 67
          Q  +  +Q    AE E++   ++FNKL  +C  KC+D  Y E +LN  E++C+DRCV+KY
Sbjct: 7  QPQLSSQQKIAAAEAELDLVTDMFNKLVSNCHRKCIDMNYNEGDLNKNESNCLDRCVAKY 66

Query: 68 WHVTNLVGQ 77
          +     VG+
Sbjct: 67 FETNVKVGE 75

[Close]

BLAST of CmoCh13G000900 vs. Swiss-Prot
Match: TIM10_DROME (Mitochondrial import inner membrane translocase subunit Tim10 OS=Drosophila melanogaster GN=Tim10 PE=3 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 1.1e-10
Identity = 30/70 (42.86%), Postives = 44/70 (62.86%), Query Frame = 1


Query: 9  SAMDKEQIFGMAEKEMEYRVELFNKLTQSCFNKCVDKRYKESELNMGENSCIDRCVSKYW 68
          S  D+ ++  M E E+E   +L+N++T +C  KC+  RY ESEL  GE  CIDRCV+KY 
Sbjct: 7  STADQAKLQLMQEMEIEMMSDLYNRMTNACHKKCIPPRYSESELGKGEMVCIDRCVAKYL 66

Query: 69 HVTNLVGQLL 79
           +   +G+ L
Sbjct: 67 DIHEKIGKKL 76

[Close]

BLAST of CmoCh13G000900 vs. Swiss-Prot
Match: TIM10_EMENI (Mitochondrial import inner membrane translocase subunit tim10 OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=tim10 PE=3 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 1.9e-10
Identity = 28/66 (42.42%), Postives = 42/66 (63.64%), Query Frame = 1


Query: 11 MDKEQIFGMAEKEMEYRVELFNKLTQSCFNKCVDKRYKESELNMGENSCIDRCVSKYWHV 70
          M  EQ    AE E+E   ++FN+L++SC  KC+   Y+E +LN GE+ C+DRCV K++ V
Sbjct: 11 MSSEQKIAAAETEVEMITDMFNRLSESCSKKCIPNDYREGDLNKGESVCLDRCVGKFFEV 70

Query: 71 TNLVGQ 77
             V +
Sbjct: 71 NIKVSE 76

[Close]

BLAST of CmoCh13G000900 vs. TrEMBL
Match: A0A0A0LVG1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G527890 PE=3 SV=1)

HSP 1 Score: 174.5 bits (441), Expect = 5.6e-41
Identity = 81/85 (95.29%), Postives = 84/85 (98.82%), Query Frame = 1


Query: 1  MASPNDMQSAMDKEQIFGMAEKEMEYRVELFNKLTQSCFNKCVDKRYKESELNMGENSCI 60
          MASPN+M SA+DKEQIFGMAEKEMEYRVELFNKLTQSCFNKCVDKRYKESELNMGENSCI
Sbjct: 1  MASPNNMPSAVDKEQIFGMAEKEMEYRVELFNKLTQSCFNKCVDKRYKESELNMGENSCI 60

Query: 61 DRCVSKYWHVTNLVGQLLGSGRPPM 86
          DRCVSKYWHVTNL+GQLLGSGRPPM
Sbjct: 61 DRCVSKYWHVTNLIGQLLGSGRPPM 85

[Close]

BLAST of CmoCh13G000900 vs. TrEMBL
Match: A0A103XPT1_CYNCS (Mitochondrial import inner membrane translocase subunit Tim10/Tim12 (Fragment) OS=Cynara cardunculus var. scolymus GN=Ccrd_003269 PE=3 SV=1)

HSP 1 Score: 162.2 bits (409), Expect = 2.9e-37
Identity = 75/85 (88.24%), Postives = 81/85 (95.29%), Query Frame = 1


Query: 1   MASPNDMQSAMDKEQIFGMAEKEMEYRVELFNKLTQSCFNKCVDKRYKESELNMGENSCI 60
           MA+ NDM +A+DKEQIFGMAEKEMEYRVELFNKLTQ+CF KCV+KRYKESELNMGENSCI
Sbjct: 45  MAANNDMPTALDKEQIFGMAEKEMEYRVELFNKLTQTCFAKCVEKRYKESELNMGENSCI 104

Query: 61  DRCVSKYWHVTNLVGQLLGSGRPPM 86
           DRCVSKYW VTNL+GQLLGSGRPPM
Sbjct: 105 DRCVSKYWQVTNLIGQLLGSGRPPM 129

[Close]

BLAST of CmoCh13G000900 vs. TrEMBL
Match: M5WKP7_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa014110mg PE=3 SV=1)

HSP 1 Score: 160.6 bits (405), Expect = 8.3e-37
Identity = 72/84 (85.71%), Postives = 81/84 (96.43%), Query Frame = 1


Query: 2  ASPNDMQSAMDKEQIFGMAEKEMEYRVELFNKLTQSCFNKCVDKRYKESELNMGENSCID 61
          A+PN+  +A+DKEQIFGMAEKEMEYRVELFNKLT +CFNKCV+K+YKE+ELNMGENSCID
Sbjct: 3  AAPNNAPTAVDKEQIFGMAEKEMEYRVELFNKLTHTCFNKCVEKKYKEAELNMGENSCID 62

Query: 62 RCVSKYWHVTNLVGQLLGSGRPPM 86
          RCVSKYWHVTNLVGQLLG+GRPPM
Sbjct: 63 RCVSKYWHVTNLVGQLLGAGRPPM 86

[Close]

BLAST of CmoCh13G000900 vs. TrEMBL
Match: C6T199_SOYBN (Uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 159.1 bits (401), Expect = 2.4e-36
Identity = 76/85 (89.41%), Postives = 79/85 (92.94%), Query Frame = 1


Query: 1  MASPNDMQSAMDKEQIFGMAEKEMEYRVELFNKLTQSCFNKCVDKRYKESELNMGENSCI 60
          MAS N   SA DKEQIFGMAEKEMEYRVELFNK+TQ+CFNKCVD RYKESELNMGENSCI
Sbjct: 1  MAS-NISPSAFDKEQIFGMAEKEMEYRVELFNKMTQTCFNKCVDNRYKESELNMGENSCI 60

Query: 61 DRCVSKYWHVTNLVGQLLGSGRPPM 86
          DRCVSKYWHVTNL+GQLLGSGRPPM
Sbjct: 61 DRCVSKYWHVTNLIGQLLGSGRPPM 84

[Close]

BLAST of CmoCh13G000900 vs. TrEMBL
Match: A0A0B2RFM4_GLYSO (Mitochondrial import inner membrane translocase subunit Tim10 OS=Glycine soja GN=glysoja_005393 PE=3 SV=1)

HSP 1 Score: 157.9 bits (398), Expect = 5.4e-36
Identity = 75/85 (88.24%), Postives = 79/85 (92.94%), Query Frame = 1


Query: 1  MASPNDMQSAMDKEQIFGMAEKEMEYRVELFNKLTQSCFNKCVDKRYKESELNMGENSCI 60
          MAS N   SA DKEQIFGMAEKEMEYRVELFNK+TQ+CFNKCVD RYKESELNMGENSCI
Sbjct: 1  MAS-NISPSAFDKEQIFGMAEKEMEYRVELFNKMTQTCFNKCVDNRYKESELNMGENSCI 60

Query: 61 DRCVSKYWHVTNLVGQLLGSGRPPM 86
          DRCVSKYWHVTNL+GQLLGSG+PPM
Sbjct: 61 DRCVSKYWHVTNLIGQLLGSGKPPM 84

[Close]

BLAST of CmoCh13G000900 vs. TAIR10
Match: AT2G29530.3 (AT2G29530.3 Tim10/DDP family zinc finger protein)

HSP 1 Score: 117.9 bits (294), Expect = 3.1e-27
Identity = 61/109 (55.96%), Postives = 70/109 (64.22%), Query Frame = 1


Query: 1   MASPNDMQSAMDKEQIFGMAEKEMEYRVELFNK------------------------LTQ 60
           MASP  +   + KEQ F MA+ EMEYRVELFN                         L Q
Sbjct: 1   MASP--IPVGVTKEQAFSMAQTEMEYRVELFNNDIYKLEEYKFETADMSKILRLPELLAQ 60

Query: 61  SCFNKCVDKRYKESELNMGENSCIDRCVSKYWHVTNLVGQLLGSGRPPM 86
           +CFNKCVDKRYKE+ELNMGENSCIDRCVSKYW V  +VGQLL +G+PP+
Sbjct: 61  TCFNKCVDKRYKEAELNMGENSCIDRCVSKYWQVNGMVGQLLSAGKPPV 107

[Close]

BLAST of CmoCh13G000900 vs. NCBI nr
Match: gi|449455056|ref|XP_004145269.1| (PREDICTED: mitochondrial import inner membrane translocase subunit TIM10 [Cucumis sativus])

HSP 1 Score: 174.5 bits (441), Expect = 8.0e-41
Identity = 81/85 (95.29%), Postives = 84/85 (98.82%), Query Frame = 1


Query: 1  MASPNDMQSAMDKEQIFGMAEKEMEYRVELFNKLTQSCFNKCVDKRYKESELNMGENSCI 60
          MASPN+M SA+DKEQIFGMAEKEMEYRVELFNKLTQSCFNKCVDKRYKESELNMGENSCI
Sbjct: 1  MASPNNMPSAVDKEQIFGMAEKEMEYRVELFNKLTQSCFNKCVDKRYKESELNMGENSCI 60

Query: 61 DRCVSKYWHVTNLVGQLLGSGRPPM 86
          DRCVSKYWHVTNL+GQLLGSGRPPM
Sbjct: 61 DRCVSKYWHVTNLIGQLLGSGRPPM 85

[Close]

BLAST of CmoCh13G000900 vs. NCBI nr
Match: gi|976907291|gb|KVH94667.1| (Mitochondrial import inner membrane translocase subunit Tim10/Tim12, partial [Cynara cardunculus var. scolymus])

HSP 1 Score: 162.2 bits (409), Expect = 4.1e-37
Identity = 75/85 (88.24%), Postives = 81/85 (95.29%), Query Frame = 1


Query: 1   MASPNDMQSAMDKEQIFGMAEKEMEYRVELFNKLTQSCFNKCVDKRYKESELNMGENSCI 60
           MA+ NDM +A+DKEQIFGMAEKEMEYRVELFNKLTQ+CF KCV+KRYKESELNMGENSCI
Sbjct: 45  MAANNDMPTALDKEQIFGMAEKEMEYRVELFNKLTQTCFAKCVEKRYKESELNMGENSCI 104

Query: 61  DRCVSKYWHVTNLVGQLLGSGRPPM 86
           DRCVSKYW VTNL+GQLLGSGRPPM
Sbjct: 105 DRCVSKYWQVTNLIGQLLGSGRPPM 129

[Close]

BLAST of CmoCh13G000900 vs. NCBI nr
Match: gi|694418755|ref|XP_009337370.1| (PREDICTED: mitochondrial import inner membrane translocase subunit TIM10-like [Pyrus x bretschneideri])

HSP 1 Score: 162.2 bits (409), Expect = 4.1e-37
Identity = 73/85 (85.88%), Postives = 81/85 (95.29%), Query Frame = 1


Query: 1  MASPNDMQSAMDKEQIFGMAEKEMEYRVELFNKLTQSCFNKCVDKRYKESELNMGENSCI 60
          MA+PN+  + +DKEQIFGMAEKEMEYRVELFNKLT +CFNKCV+K+YKESELNMGENSCI
Sbjct: 1  MAAPNNAPTVLDKEQIFGMAEKEMEYRVELFNKLTHTCFNKCVEKKYKESELNMGENSCI 60

Query: 61 DRCVSKYWHVTNLVGQLLGSGRPPM 86
          DRCVSKYWHVTNLVGQLLG+GRPPM
Sbjct: 61 DRCVSKYWHVTNLVGQLLGTGRPPM 85

[Close]

BLAST of CmoCh13G000900 vs. NCBI nr
Match: gi|595831038|ref|XP_007206191.1| (hypothetical protein PRUPE_ppa014110mg [Prunus persica])

HSP 1 Score: 160.6 bits (405), Expect = 1.2e-36
Identity = 72/84 (85.71%), Postives = 81/84 (96.43%), Query Frame = 1


Query: 2  ASPNDMQSAMDKEQIFGMAEKEMEYRVELFNKLTQSCFNKCVDKRYKESELNMGENSCID 61
          A+PN+  +A+DKEQIFGMAEKEMEYRVELFNKLT +CFNKCV+K+YKE+ELNMGENSCID
Sbjct: 3  AAPNNAPTAVDKEQIFGMAEKEMEYRVELFNKLTHTCFNKCVEKKYKEAELNMGENSCID 62

Query: 62 RCVSKYWHVTNLVGQLLGSGRPPM 86
          RCVSKYWHVTNLVGQLLG+GRPPM
Sbjct: 63 RCVSKYWHVTNLVGQLLGAGRPPM 86

[Close]

BLAST of CmoCh13G000900 vs. NCBI nr
Match: gi|1009114878|ref|XP_015873929.1| (PREDICTED: mitochondrial import inner membrane translocase subunit TIM10 [Ziziphus jujuba])

HSP 1 Score: 160.2 bits (404), Expect = 1.6e-36
Identity = 73/85 (85.88%), Postives = 81/85 (95.29%), Query Frame = 1


Query: 1  MASPNDMQSAMDKEQIFGMAEKEMEYRVELFNKLTQSCFNKCVDKRYKESELNMGENSCI 60
          MAS ++  +A++KEQIFGMAEKEMEYRVELFNKLT +CFNKCVDK+YKESELNMGENSCI
Sbjct: 1  MASNSNAPNALEKEQIFGMAEKEMEYRVELFNKLTHTCFNKCVDKKYKESELNMGENSCI 60

Query: 61 DRCVSKYWHVTNLVGQLLGSGRPPM 86
          DRCVSKYWHVTNL+GQLLGSGRPPM
Sbjct: 61 DRCVSKYWHVTNLIGQLLGSGRPPM 85

The following BLAST results are available for this feature:

BLAST of CmoCh13G000900 vs. Swiss-Prot


Match Name	E-value	Identity	Description
TIM10_ARATH	1.3e-30	72.94	Mitochondrial import inner membrane translocase subunit TIM10 OS=Arabidopsis tha...	[more]
TIM10_YEAST	5.1e-11	40.58	Mitochondrial import inner membrane translocase subunit TIM10 OS=Saccharomyces c...	[more]
TIM10_ASHGO	8.6e-11	39.13	Mitochondrial import inner membrane translocase subunit TIM10 OS=Ashbya gossypii...	[more]
TIM10_DROME	1.1e-10	42.86	Mitochondrial import inner membrane translocase subunit Tim10 OS=Drosophila mela...	[more]
TIM10_EMENI	1.9e-10	42.42	Mitochondrial import inner membrane translocase subunit tim10 OS=Emericella nidu...	[more]

BLAST of CmoCh13G000900 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LVG1_CUCSA	5.6e-41	95.29	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G527890 PE=3 SV=1	[more]
A0A103XPT1_CYNCS	2.9e-37	88.24	Mitochondrial import inner membrane translocase subunit Tim10/Tim12 (Fragment) O...	[more]
M5WKP7_PRUPE	8.3e-37	85.71	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa014110mg PE=3 SV=1	[more]
C6T199_SOYBN	2.4e-36	89.41	Uncharacterized protein OS=Glycine max PE=2 SV=1	[more]
A0A0B2RFM4_GLYSO	5.4e-36	88.24	Mitochondrial import inner membrane translocase subunit Tim10 OS=Glycine soja GN...	[more]

BLAST of CmoCh13G000900 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G29530.3	3.1e-27	55.96	Tim10/DDP family zinc finger protein	[more]

BLAST of CmoCh13G000900 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449455056\|ref\|XP_004145269.1\|	8.0e-41	95.29	PREDICTED: mitochondrial import inner membrane translocase subunit TIM10 [Cucumi...	[more]
gi\|976907291\|gb\|KVH94667.1\|	4.1e-37	88.24	Mitochondrial import inner membrane translocase subunit Tim10/Tim12, partial [Cy...	[more]
gi\|694418755\|ref\|XP_009337370.1\|	4.1e-37	85.88	PREDICTED: mitochondrial import inner membrane translocase subunit TIM10-like [P...	[more]
gi\|595831038\|ref\|XP_007206191.1\|	1.2e-36	85.71	hypothetical protein PRUPE_ppa014110mg [Prunus persica]	[more]
gi\|1009114878\|ref\|XP_015873929.1\|	1.6e-36	85.88	PREDICTED: mitochondrial import inner membrane translocase subunit TIM10 [Ziziph...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR004217	Tim10-like
IPR027247	Mitochondrial import inner membrane translocase subunit Tim10/Tim12

Vocabulary: **Biological Process**
Term	Definition
GO:0045039	protein import into mitochondrial inner membrane

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009853	photorespiration
biological_process	GO:0045039	protein import into mitochondrial inner membrane
biological_process	GO:0001510	RNA methylation
biological_process	GO:0044237	cellular metabolic process
cellular_component	GO:0005758	mitochondrial intermembrane space
cellular_component	GO:0005739	mitochondrion
cellular_component	GO:0042721	mitochondrial inner membrane protein insertion complex
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0008565	protein transporter activity
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh13G000900.1	CmoCh13G000900.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004217	Tim10/DDP family zinc finger	GENE3D	G3DSA:1.10.287.810		coord: 19..78 score: 2.1
IPR004217	Tim10/DDP family zinc finger	PFAM	PF02953	zf-Tim10_DDP	coord: 19..77 score: 7.6
IPR004217	Tim10/DDP family zinc finger	unknown	SSF144122	Tim10-like	coord: 23..79 score: 1.57
IPR027247	Mitochondrial import inner membrane translocase subunit Tim10/Tim12	PANTHER	PTHR11038	MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM10	coord: 11..79 score: 3.1
None	No IPR available	PANTHER	PTHR11038:SF17	SUBFAMILY NOT NAMED	coord: 11..79 score: 3.1

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh13G000900	Cucsa.146720	Cucumber (Gy14) v1	cgycmoB0402
CmoCh13G000900	CmaCh13G000940	Cucurbita maxima (Rimu)	cmacmoB218
CmoCh13G000900	CmaCh01G006370	Cucurbita maxima (Rimu)	cmacmoB458
CmoCh13G000900	Cla008196	Watermelon (97103) v1	cmowmB173
CmoCh13G000900	Csa1G527890	Cucumber (Chinese Long) v2	cmocuB204
CmoCh13G000900	MELO3C020586	Melon (DHL92) v3.5.1	cmomeB181
CmoCh13G000900	ClCG03G001090	Watermelon (Charleston Gray)	cmowcgB184
CmoCh13G000900	CSPI01G23550	Wild cucumber (PI 183967)	cmocpiB206
CmoCh13G000900	Lsi02G013170	Bottle gourd (USVL1VR-Ls)	cmolsiB191
CmoCh13G000900	Cp4.1LG02g11520	Cucurbita pepo (Zucchini)	cmocpeB207
CmoCh13G000900	MELO3C020586.2	Melon (DHL92) v3.6.1	cmomedB203
CmoCh13G000900	CsaV3_1G035840	Cucumber (Chinese Long) v3	cmocucB0236
CmoCh13G000900	Cla97C03G051920	Watermelon (97103) v2	cmowmbB209
CmoCh13G000900	CsGy1G023010	Cucumber (Gy14) v2	cgybcmoB069
CmoCh13G000900	Carg12406	Silver-seed gourd	carcmoB0594
CmoCh13G000900	Carg20627	Silver-seed gourd	carcmoB0517

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmoCh13G000900	CmoCh01G006690	Cucurbita moschata (Rifu)	cmocmoB173

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh13G000900	Watermelon (97103) v2	cmowmbB204
CmoCh13G000900	Wax gourd	cmowgoB0238
CmoCh13G000900	Wax gourd	cmowgoB0245
CmoCh13G000900	Cucurbita moschata (Rifu)	cmocmoB180
CmoCh13G000900	Cucurbita moschata (Rifu)	cmocmoB189
CmoCh13G000900	Cucumber (Gy14) v1	cgycmoB0384
CmoCh13G000900	Cucurbita maxima (Rimu)	cmacmoB577
CmoCh13G000900	Wild cucumber (PI 183967)	cmocpiB214
CmoCh13G000900	Wild cucumber (PI 183967)	cmocpiB217
CmoCh13G000900	Cucumber (Chinese Long) v2	cmocuB214
CmoCh13G000900	Melon (DHL92) v3.5.1	cmomeB178
CmoCh13G000900	Watermelon (Charleston Gray)	cmowcgB180
CmoCh13G000900	Watermelon (97103) v1	cmowmB197
CmoCh13G000900	Cucurbita pepo (Zucchini)	cmocpeB202
CmoCh13G000900	Bottle gourd (USVL1VR-Ls)	cmolsiB186
CmoCh13G000900	Melon (DHL92) v3.6.1	cmomedB198
CmoCh13G000900	Silver-seed gourd	carcmoB0212
CmoCh13G000900	Cucumber (Chinese Long) v3	cmocucB0253