CmoCh13G000260 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh13G000260
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Callose synthase 1 family protein
Location	Cmo_Chr13 : 199495 .. 200681 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTAGATCCTTACGATCGGATGCACCTGCGCCGAGTGCCCTAATTAGCCATCGTCGCTGCTCGTTCCGATTCGAGAATGAACGCATCGTTGAATTCAGGAATGGTTTTCTCTGAAGGTACATACAAAGATGGTTTTTCTGTTTTCTGTTCTTTGAAGTGATTCAATTTTCCTGAGTTCTTTGGTCGCGATGTTTCTCGCAGACATAGCCGACGGAAGTGATTCGGATACGAATTCCGCTGAAGGATCGGATTACTACGAGCCGATCTCGGCCATTGATGGTGAAGAATCCGATGAAGCTGGATCAGATGACGAACCTTACAGCTCCGATACTCATTTGCACCATTTACCCAACGGTTGCCGTGTAGAGAATGCAGTTTCGTCTCTTAGCCTGAACGACGATGTGGAGAGAAGGTGCAGTGATGAGGAAGAGGAGGAGAGCATGAGAGAGGCTTCTGATTCAGCGATTAGAATGGCGTTTAGAGAGGATGAGACTCGGAGAAATGCGCCGCTGTCGCCGGAGAATGCGACGAGGATCATGGAGGCCATGCGCGGCATCTCATTTGGCGGCTCTGCTCCAGATTGGACTCGGATTGTATCTGAGGATCGTTGGATTGATCAACTTCGAAGGCTTAGGCAAACCCCTACCTCTCCCAATAATTTCGGAAACTGAGAGATGGAACTCTCATCATCTCAAAATTCAGATCCTTCTTCTTCTTCTTCATTCCTTTAGTTTAACATAGAATTGTCATATGACTCTCCGATAATCCTCTTGAATAAAGATCCTTCTGGGTTTTGGTTCGCGAACAGTTCATCCATTTCCCAATCACATGCGCTTTCTTCGATCTCATAATTAAGTGTCAACTCAACTTATGCTTGAAAGAAAACTGAAGTCATGACTTTCAAGGGAGCTGCTTGCTTCAAGCTACAATATGATGTCTGCACTTTTGTCTAATGGCTCAAAGCTCAAAATAGAGAATTGAATTGGTGATATGTTAGATCATATGTTTCTCGGTTCTTGAATTCAAACTCTCTGGCCTTCCTTCCCCTTTTGTTTTCTTTGATTCTTGTATCCTATGGAGCAGAAGTCATCTGTAATATTTGATGAAATTGAAGTAAAGGACTGATGGAAGTTTCCATTATCATAAGGAGGGGCAAAATGTTGTATAAATTATGGCTTAAATGGTGG

mRNA sequence

TTTAGATCCTTACGATCGGATGCACCTGCGCCGAGTGCCCTAATTAGCCATCGTCGCTGCTCGTTCCGATTCGAGAATGAACGCATCGTTGAATTCAGGAATGGTTTTCTCTGAAGACATAGCCGACGGAAGTGATTCGGATACGAATTCCGCTGAAGGATCGGATTACTACGAGCCGATCTCGGCCATTGATGGTGAAGAATCCGATGAAGCTGGATCAGATGACGAACCTTACAGCTCCGATACTCATTTGCACCATTTACCCAACGGTTGCCGTGTAGAGAATGCAGTTTCGTCTCTTAGCCTGAACGACGATGTGGAGAGAAGGTGCAGTGATGAGGAAGAGGAGGAGAGCATGAGAGAGGCTTCTGATTCAGCGATTAGAATGGCGTTTAGAGAGGATGAGACTCGGAGAAATGCGCCGCTGTCGCCGGAGAATGCGACGAGGATCATGGAGGCCATGCGCGGCATCTCATTTGGCGGCTCTGCTCCAGATTGGACTCGGATTGTATCTGAGGATCGTTGGATTGATCAACTTCGAAGGCTTAGGCAAACCCCTACCTCTCCCAATAATTTCGGAAACTGAGAGATGGAACTCTCATCATCTCAAAATTCAGATCCTTCTTCTTCTTCTTCATTCCTTTAGTTTAACATAGAATTGTCATATGACTCTCCGATAATCCTCTTGAATAAAGATCCTTCTGGGTTTTGGTTCGCGAACAGTTCATCCATTTCCCAATCACATGCGCTTTCTTCGATCTCATAATTAAGTGTCAACTCAACTTATGCTTGAAAGAAAACTGAAGTCATGACTTTCAAGGGAGCTGCTTGCTTCAAGCTACAATATGATGTCTGCACTTTTGTCTAATGGCTCAAAGCTCAAAATAGAGAATTGAATTGGTGATATGTTAGATCATATGTTTCTCGGTTCTTGAATTCAAACTCTCTGGCCTTCCTTCCCCTTTTGTTTTCTTTGATTCTTGTATCCTATGGAGCAGAAGTCATCTGTAATATTTGATGAAATTGAAGTAAAGGACTGATGGAAGTTTCCATTATCATAAGGAGGGGCAAAATGTTGTATAAATTATGGCTTAAATGGTGG

Coding sequence (CDS)

ATGAACGCATCGTTGAATTCAGGAATGGTTTTCTCTGAAGACATAGCCGACGGAAGTGATTCGGATACGAATTCCGCTGAAGGATCGGATTACTACGAGCCGATCTCGGCCATTGATGGTGAAGAATCCGATGAAGCTGGATCAGATGACGAACCTTACAGCTCCGATACTCATTTGCACCATTTACCCAACGGTTGCCGTGTAGAGAATGCAGTTTCGTCTCTTAGCCTGAACGACGATGTGGAGAGAAGGTGCAGTGATGAGGAAGAGGAGGAGAGCATGAGAGAGGCTTCTGATTCAGCGATTAGAATGGCGTTTAGAGAGGATGAGACTCGGAGAAATGCGCCGCTGTCGCCGGAGAATGCGACGAGGATCATGGAGGCCATGCGCGGCATCTCATTTGGCGGCTCTGCTCCAGATTGGACTCGGATTGTATCTGAGGATCGTTGGATTGATCAACTTCGAAGGCTTAGGCAAACCCCTACCTCTCCCAATAATTTCGGAAACTGA

Homology

[Close]

BLAST of CmoCh13G000260 vs. TrEMBL
Match: A0A0A0LXQ6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G533510 PE=4 SV=1)

HSP 1 Score: 284.6 bits (727), Expect = 7.6e-74
Identity = 148/169 (87.57%), Postives = 155/169 (91.72%), Query Frame = 1


Query: 1   MNASLNSGMVFSEDIADGSDSDTNSAEGSDYYEPISAIDGEESDEAGSDDEPYSSDTHLH 60
           MNA+LNSG+VF+EDIADGSDSDTNSAEGSDYYEPISAIDGEESD A S+DE YSSD H H
Sbjct: 1   MNATLNSGIVFTEDIADGSDSDTNSAEGSDYYEPISAIDGEESDIAESEDETYSSDPHFH 60

Query: 61  HLPNGCRVENAVSSLSLNDDVERRCSDEEEEESMREASDSAIRMAFREDETRRNAPLSPE 120
            LPNGC VENAVSSL+LNDDVERRCSD+EEEE MR ASDSAIRMAFREDETRRNAPLSPE
Sbjct: 61  QLPNGCGVENAVSSLTLNDDVERRCSDDEEEERMRVASDSAIRMAFREDETRRNAPLSPE 120

Query: 121 NATRIMEAMRGISFGGSAPDWTRIVSEDRWIDQLRRLRQTPTSPNNFGN 170
           N TRIMEAMRGISF GSAPDWTRIVSEDRWIDQLRRLRQTPT  N+ GN
Sbjct: 121 NTTRIMEAMRGISFDGSAPDWTRIVSEDRWIDQLRRLRQTPTVSNSLGN 169

[Close]

BLAST of CmoCh13G000260 vs. TrEMBL
Match: D7SJQ2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_06s0004g07370 PE=4 SV=1)

HSP 1 Score: 173.7 bits (439), Expect = 1.9e-40
Identity = 100/164 (60.98%), Postives = 115/164 (70.12%), Query Frame = 1


Query: 11  FSEDIADGSDSDTNSAEGSDYYEPISAID--GEESDEAGSDDEPYSSDTHLHHLPNG-CR 70
           F E    GSDSDTNS +  +YY+PISA+D  GE SD+  SD++     +  H LPNG C 
Sbjct: 8   FMEGNGGGSDSDTNSEDSPEYYQPISAVDSDGEASDQVNSDEDHEEHASDFHRLPNGYCG 67

Query: 71  --VENAVSSLSLNDDVERRCSDEEEEESMREASDSAIRMAFREDETRRNAPLSPENATRI 130
              EN VSSL+LNDDVE    +E EEE MRE SDSAIR AFREDE+RRNAPL+PENA ++
Sbjct: 68  HVAENGVSSLNLNDDVE----EEHEEERMRETSDSAIRRAFREDESRRNAPLTPENAMQV 127

Query: 131 MEAMRGISFGGSAPDWTRIVSEDRWIDQLRRLRQTPTSPNNFGN 170
           MEAMRG+SFGG APDW   V EDRWIDQLRRLRQ P       N
Sbjct: 128 MEAMRGVSFGGLAPDWAGHVPEDRWIDQLRRLRQPPAPSTTIRN 167

[Close]

BLAST of CmoCh13G000260 vs. TrEMBL
Match: M1D2D4_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG401031052 PE=4 SV=1)

HSP 1 Score: 152.9 bits (385), Expect = 3.5e-34
Identity = 93/175 (53.14%), Postives = 118/175 (67.43%), Query Frame = 1


Query: 1   MNASLNSGMVFSEDIADGSDSDTNSAEGSDYYEPISAIDGEE----SDEA-----GSDDE 60
           MNA LNS   F ++ A GSDSD+N  +  +YYEPIS+   ++    SD+       SDDE
Sbjct: 1   MNAQLNSTPDFIQENAAGSDSDSNPDDSLEYYEPISSTADDDDLQISDQIPNHVQNSDDE 60

Query: 61  PYSSDTHLHHLPNGCR--VENAVSSLSLND-DVERRCSDEEEEESMREASDSAIRMAFRE 120
                ++ H LPNG    VEN +SSL L+D D E +   EEEEE +R ASD+A+R AFRE
Sbjct: 61  ECDESSYFHRLPNGYANCVENEISSLDLSDEDGEHKSEVEEEEERIRAASDTAVRRAFRE 120

Query: 121 DETRRNAPLSPENATRIMEAMRGISFGGSAPDWTRIVSEDRWIDQLRRLRQTPTS 164
           DE+RRN PL+ E+ATR+MEAMR ISFGG APDWT  V ED+WID L+RLR+ P +
Sbjct: 121 DESRRNTPLTTESATRVMEAMRRISFGGVAPDWTSQVPEDQWIDHLQRLRRPPAT 175

[Close]

BLAST of CmoCh13G000260 vs. TrEMBL
Match: A0A0V0HLR2_SOLCH (Putative ovule protein OS=Solanum chacoense PE=4 SV=1)

HSP 1 Score: 149.8 bits (377), Expect = 2.9e-33
Identity = 92/175 (52.57%), Postives = 116/175 (66.29%), Query Frame = 1


Query: 1   MNASLNSGMVFSEDIADGSDSDTNSAEGSDYYEPISAIDGEE----SDEA-----GSDDE 60
           MNA LNS   F ++ A GSDSD+N  +  +YYEPIS+   ++    SD+       SDDE
Sbjct: 1   MNAQLNSTPDFIQENAAGSDSDSNPDDSLEYYEPISSTADDDDLQISDQIPNHVQNSDDE 60

Query: 61  PYSSDTHLHHLPNGCR--VENAVSSLSLND-DVERRCSDEEEEESMREASDSAIRMAFRE 120
                ++ H LPNG    VEN +SSL L+D D E     EEEEE +R ASD+A+R AFRE
Sbjct: 61  ECDESSYFHRLPNGYANCVENEISSLDLSDEDGEHMSEVEEEEERIRAASDTAVRRAFRE 120

Query: 121 DETRRNAPLSPENATRIMEAMRGISFGGSAPDWTRIVSEDRWIDQLRRLRQTPTS 164
           DE+RRN PL+ ENATR+M+AMR ISFGG AP WT  V ED+WID L+RLR+ P +
Sbjct: 121 DESRRNTPLTTENATRVMDAMRRISFGGVAPGWTSQVPEDQWIDHLQRLRRPPAT 175

[Close]

BLAST of CmoCh13G000260 vs. TrEMBL
Match: K4BJM8_SOLLC (Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1)

HSP 1 Score: 149.1 bits (375), Expect = 5.0e-33
Identity = 93/176 (52.84%), Postives = 116/176 (65.91%), Query Frame = 1


Query: 1   MNASLNSGMVFSEDIADGSDSDTNSAEGSDYYEPISAIDGEE----SDEA-----GSDDE 60
           MNA LN    F ++ A GSDSD+N  +  +YYEPIS+   ++    SD+       SDDE
Sbjct: 1   MNAQLNFTPDFIQENAAGSDSDSNPDDSPEYYEPISSTADDDDVHISDQIPDHVQSSDDE 60

Query: 61  PYSSDTHLHHLPNG---CRVENAVSSLSLND-DVERRCSDEEEEESMREASDSAIRMAFR 120
                ++ H LPNG   C VEN +SSL L+D D E +   EEEEE +R ASD+A+R AFR
Sbjct: 61  ECDESSNFHRLPNGYVNC-VENGISSLDLSDEDGEYKSEVEEEEERIRAASDTAVRRAFR 120

Query: 121 EDETRRNAPLSPENATRIMEAMRGISFGGSAPDWTRIVSEDRWIDQLRRLRQTPTS 164
           EDE+RRN PL+ ENA R+MEAMR ISFGG APDWT  V ED+WID L+RLR  P +
Sbjct: 121 EDESRRNTPLTTENARRVMEAMRRISFGGVAPDWTSQVPEDQWIDHLQRLRSPPAT 175

[Close]

BLAST of CmoCh13G000260 vs. TAIR10
Match: AT1G07020.1 (AT1G07020.1 unknown protein)

HSP 1 Score: 113.2 bits (282), Expect = 1.5e-25
Identity = 78/149 (52.35%), Postives = 94/149 (63.09%), Query Frame = 1


Query: 18  GSDSDTNSAEGS-DYYEPISAIDGEESDEAGSDDE-PYSSDTHLHHLPNG-CRVENA--- 77
           GSDSD+NS E S DYYEPISA+D   S++   D   P   D     L NG C + +A   
Sbjct: 8   GSDSDSNSVEDSQDYYEPISAVDLYNSNDDEEDSYLPIGGDG----LSNGHCMIPDAEVG 67

Query: 78  VSSLSLNDDVERRCSDEEEEESMREASDSAIRMAFREDETRRNAPLSPENATRIMEAMRG 137
           +SS+S+ND+     +D EEE       +  IR AF EDE RR +PL  ENA R+MEAMR 
Sbjct: 68  ISSISINDN-----TDSEEETETETGPE--IRRAFEEDERRRRSPLVEENAVRVMEAMRA 127

Query: 138 ISFGGSAPDWTRIVSEDRWIDQLRRLRQT 161
           ISF G+APDW   V+EDRWIDQLRRLR T
Sbjct: 128 ISFPGTAPDWASDVNEDRWIDQLRRLRTT 145

[Close]

BLAST of CmoCh13G000260 vs. NCBI nr
Match: gi|659114979|ref|XP_008457323.1| (PREDICTED: uncharacterized protein LOC103497044 [Cucumis melo])

HSP 1 Score: 288.9 bits (738), Expect = 5.8e-75
Identity = 150/169 (88.76%), Postives = 156/169 (92.31%), Query Frame = 1


Query: 1   MNASLNSGMVFSEDIADGSDSDTNSAEGSDYYEPISAIDGEESDEAGSDDEPYSSDTHLH 60
           MNA+LNSG+VFSEDI DGSDSDTNSAEGSDYYEPISAIDGEESD A S+DE YSSDTH H
Sbjct: 1   MNATLNSGIVFSEDIVDGSDSDTNSAEGSDYYEPISAIDGEESDIAESEDETYSSDTHFH 60

Query: 61  HLPNGCRVENAVSSLSLNDDVERRCSDEEEEESMREASDSAIRMAFREDETRRNAPLSPE 120
            LPNGC VENAVSSL+LNDDVERRCSD+EEEE MREASDSAIRMAFREDETRRNAPLSPE
Sbjct: 61  QLPNGCGVENAVSSLTLNDDVERRCSDDEEEERMREASDSAIRMAFREDETRRNAPLSPE 120

Query: 121 NATRIMEAMRGISFGGSAPDWTRIVSEDRWIDQLRRLRQTPTSPNNFGN 170
           N TRIMEAMRGISFGGSAPDWTRIVSEDRWIDQLRRLRQTPT  N+  N
Sbjct: 121 NTTRIMEAMRGISFGGSAPDWTRIVSEDRWIDQLRRLRQTPTVSNSIRN 169

[Close]

BLAST of CmoCh13G000260 vs. NCBI nr
Match: gi|449471622|ref|XP_004153363.1| (PREDICTED: uncharacterized protein LOC101214045 [Cucumis sativus])

HSP 1 Score: 284.6 bits (727), Expect = 1.1e-73
Identity = 148/169 (87.57%), Postives = 155/169 (91.72%), Query Frame = 1


Query: 1   MNASLNSGMVFSEDIADGSDSDTNSAEGSDYYEPISAIDGEESDEAGSDDEPYSSDTHLH 60
           MNA+LNSG+VF+EDIADGSDSDTNSAEGSDYYEPISAIDGEESD A S+DE YSSD H H
Sbjct: 1   MNATLNSGIVFTEDIADGSDSDTNSAEGSDYYEPISAIDGEESDIAESEDETYSSDPHFH 60

Query: 61  HLPNGCRVENAVSSLSLNDDVERRCSDEEEEESMREASDSAIRMAFREDETRRNAPLSPE 120
            LPNGC VENAVSSL+LNDDVERRCSD+EEEE MR ASDSAIRMAFREDETRRNAPLSPE
Sbjct: 61  QLPNGCGVENAVSSLTLNDDVERRCSDDEEEERMRVASDSAIRMAFREDETRRNAPLSPE 120

Query: 121 NATRIMEAMRGISFGGSAPDWTRIVSEDRWIDQLRRLRQTPTSPNNFGN 170
           N TRIMEAMRGISF GSAPDWTRIVSEDRWIDQLRRLRQTPT  N+ GN
Sbjct: 121 NTTRIMEAMRGISFDGSAPDWTRIVSEDRWIDQLRRLRQTPTVSNSLGN 169

[Close]

BLAST of CmoCh13G000260 vs. NCBI nr
Match: gi|359478529|ref|XP_003632127.1| (PREDICTED: uncharacterized protein LOC100251809 [Vitis vinifera])

HSP 1 Score: 176.0 bits (445), Expect = 5.5e-41
Identity = 103/174 (59.20%), Postives = 118/174 (67.82%), Query Frame = 1


Query: 1   MNASLNSGMVFSEDIADGSDSDTNSAEGSDYYEPISAID--GEESDEAGSDDEPYSSDTH 60
           MN   N    F E    GSDSDTNS +  +YY+PISA+D  GE SD+  SD++     + 
Sbjct: 1   MNGMSNPTTDFMEGNGGGSDSDTNSEDSPEYYQPISAVDSDGEASDQVNSDEDHEEHASD 60

Query: 61  LHHLPNG-CR--VENAVSSLSLNDDVERRCSDEEEEESMREASDSAIRMAFREDETRRNA 120
            H LPNG C    EN VSSL+LNDDVE    +E EEE MRE SDSAIR AFREDE+RRNA
Sbjct: 61  FHRLPNGYCGHVAENGVSSLNLNDDVE----EEHEEERMRETSDSAIRRAFREDESRRNA 120

Query: 121 PLSPENATRIMEAMRGISFGGSAPDWTRIVSEDRWIDQLRRLRQTPTSPNNFGN 170
           PL+PENA ++MEAMRG+SFGG APDW   V EDRWIDQLRRLRQ P       N
Sbjct: 121 PLTPENAMQVMEAMRGVSFGGLAPDWAGHVPEDRWIDQLRRLRQPPAPSTTIRN 170

[Close]

BLAST of CmoCh13G000260 vs. NCBI nr
Match: gi|297745822|emb|CBI15878.3| (unnamed protein product [Vitis vinifera])

HSP 1 Score: 173.7 bits (439), Expect = 2.7e-40
Identity = 100/164 (60.98%), Postives = 115/164 (70.12%), Query Frame = 1


Query: 11  FSEDIADGSDSDTNSAEGSDYYEPISAID--GEESDEAGSDDEPYSSDTHLHHLPNG-CR 70
           F E    GSDSDTNS +  +YY+PISA+D  GE SD+  SD++     +  H LPNG C 
Sbjct: 8   FMEGNGGGSDSDTNSEDSPEYYQPISAVDSDGEASDQVNSDEDHEEHASDFHRLPNGYCG 67

Query: 71  --VENAVSSLSLNDDVERRCSDEEEEESMREASDSAIRMAFREDETRRNAPLSPENATRI 130
              EN VSSL+LNDDVE    +E EEE MRE SDSAIR AFREDE+RRNAPL+PENA ++
Sbjct: 68  HVAENGVSSLNLNDDVE----EEHEEERMRETSDSAIRRAFREDESRRNAPLTPENAMQV 127

Query: 131 MEAMRGISFGGSAPDWTRIVSEDRWIDQLRRLRQTPTSPNNFGN 170
           MEAMRG+SFGG APDW   V EDRWIDQLRRLRQ P       N
Sbjct: 128 MEAMRGVSFGGLAPDWAGHVPEDRWIDQLRRLRQPPAPSTTIRN 167

[Close]

BLAST of CmoCh13G000260 vs. NCBI nr
Match: gi|698558970|ref|XP_009771443.1| (PREDICTED: uncharacterized protein LOC104221980 [Nicotiana sylvestris])

HSP 1 Score: 153.3 bits (386), Expect = 3.8e-34
Identity = 92/176 (52.27%), Postives = 115/176 (65.34%), Query Frame = 1


Query: 1   MNASLNSGMVFSEDIADGSDSDTNSAEGSDYYEPISAI----DGEESDEA-----GSDDE 60
           MNA LNS   F ++    SDSDTN+ +  +YY+PIS+I    D + SD+       SDDE
Sbjct: 1   MNAQLNSTPSFIQENGTESDSDTNTDDSPEYYQPISSIADDDDAQISDQRPNPVQNSDDE 60

Query: 61  PYSSDTHLHHLPNGCR--VENAVSSLSLNDDVERRCSDE--EEEESMREASDSAIRMAFR 120
                 H H LPNG    VEN +SSL L+D  E  C  E  EEEE +R ASD+A + A R
Sbjct: 61  EPDESNHFHRLPNGYAHCVENGISSLDLSDGEEDECKSEVEEEEEGIRAASDNAAQRALR 120

Query: 121 EDETRRNAPLSPENATRIMEAMRGISFGGSAPDWTRIVSEDRWIDQLRRLRQTPTS 164
           EDE+RRNAPL+ ENATR+MEAMR +SFGG AP+WT  V ED+WI+ LRRLR+ P +
Sbjct: 121 EDESRRNAPLTEENATRVMEAMRRVSFGGVAPNWTSEVPEDQWIEHLRRLREPPAN 176

The following BLAST results are available for this feature:

BLAST of CmoCh13G000260 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmoCh13G000260 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LXQ6_CUCSA	7.6e-74	87.57	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G533510 PE=4 SV=1	[more]
D7SJQ2_VITVI	1.9e-40	60.98	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_06s0004g07370 PE=4 SV=...	[more]
M1D2D4_SOLTU	3.5e-34	53.14	Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG401031052 PE=4 SV=1	[more]
A0A0V0HLR2_SOLCH	2.9e-33	52.57	Putative ovule protein OS=Solanum chacoense PE=4 SV=1	[more]
K4BJM8_SOLLC	5.0e-33	52.84	Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1	[more]

BLAST of CmoCh13G000260 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G07020.1	1.5e-25	52.35	unknown protein	[more]

BLAST of CmoCh13G000260 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659114979\|ref\|XP_008457323.1\|	5.8e-75	88.76	PREDICTED: uncharacterized protein LOC103497044 [Cucumis melo]	[more]
gi\|449471622\|ref\|XP_004153363.1\|	1.1e-73	87.57	PREDICTED: uncharacterized protein LOC101214045 [Cucumis sativus]	[more]
gi\|359478529\|ref\|XP_003632127.1\|	5.5e-41	59.20	PREDICTED: uncharacterized protein LOC100251809 [Vitis vinifera]	[more]
gi\|297745822\|emb\|CBI15878.3\|	2.7e-40	60.98	unnamed protein product [Vitis vinifera]	[more]
gi\|698558970\|ref\|XP_009771443.1\|	3.8e-34	52.27	PREDICTED: uncharacterized protein LOC104221980 [Nicotiana sylvestris]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh13G000260.1	CmoCh13G000260.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR37175	FAMILY NOT NAMED	coord: 3..167 score: 6.9
None	No IPR available	PANTHER	PTHR37175:SF1	SUBFAMILY NOT NAMED	coord: 3..167 score: 6.9

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh13G000260	Cucsa.151860	Cucumber (Gy14) v1	cgycmoB0417
CmoCh13G000260	CmaCh13G000380	Cucurbita maxima (Rimu)	cmacmoB218
CmoCh13G000260	Cla008129	Watermelon (97103) v1	cmowmB178
CmoCh13G000260	Csa1G533510	Cucumber (Chinese Long) v2	cmocuB195
CmoCh13G000260	MELO3C020513	Melon (DHL92) v3.5.1	cmomeB188
CmoCh13G000260	ClCG03G000370	Watermelon (Charleston Gray)	cmowcgB189
CmoCh13G000260	CSPI01G24250	Wild cucumber (PI 183967)	cmocpiB199
CmoCh13G000260	Lsi02G012440	Bottle gourd (USVL1VR-Ls)	cmolsiB199
CmoCh13G000260	Cp4.1LG20g07750	Cucurbita pepo (Zucchini)	cmocpeB202
CmoCh13G000260	MELO3C020513.2	Melon (DHL92) v3.6.1	cmomedB210
CmoCh13G000260	CsaV3_1G036550	Cucumber (Chinese Long) v3	cmocucB0229
CmoCh13G000260	Cla97C03G051190	Watermelon (97103) v2	cmowmbB214
CmoCh13G000260	Bhi08G000383	Wax gourd	cmowgoB0268
CmoCh13G000260	CsGy1G023730	Cucumber (Gy14) v2	cgybcmoB064

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh13G000260	Cucurbita pepo (Zucchini)	cmocpeB211
CmoCh13G000260	Cucurbita pepo (Zucchini)	cmocpeB198
CmoCh13G000260	Cucurbita pepo (Zucchini)	cmocpeB206
CmoCh13G000260	Bottle gourd (USVL1VR-Ls)	cmolsiB186
CmoCh13G000260	Bottle gourd (USVL1VR-Ls)	cmolsiB191
CmoCh13G000260	Cucumber (Gy14) v2	cgybcmoB069
CmoCh13G000260	Melon (DHL92) v3.6.1	cmomedB203
CmoCh13G000260	Silver-seed gourd	carcmoB0705
CmoCh13G000260	Silver-seed gourd	carcmoB0913
CmoCh13G000260	Cucumber (Chinese Long) v3	cmocucB0236
CmoCh13G000260	Watermelon (97103) v2	cmowmbB204
CmoCh13G000260	Watermelon (97103) v2	cmowmbB209
CmoCh13G000260	Wax gourd	cmowgoB0238
CmoCh13G000260	Wax gourd	cmowgoB0245
CmoCh13G000260	Cucurbita moschata (Rifu)	cmocmoB173
CmoCh13G000260	Cucurbita moschata (Rifu)	cmocmoB180
CmoCh13G000260	Cucurbita moschata (Rifu)	cmocmoB186
CmoCh13G000260	Cucurbita moschata (Rifu)	cmocmoB187
CmoCh13G000260	Cucumber (Gy14) v1	cgycmoB0418
CmoCh13G000260	Cucurbita maxima (Rimu)	cmacmoB458
CmoCh13G000260	Cucurbita maxima (Rimu)	cmacmoB577
CmoCh13G000260	Cucumber (Chinese Long) v2	cmocuB204
CmoCh13G000260	Melon (DHL92) v3.5.1	cmomeB181
CmoCh13G000260	Watermelon (Charleston Gray)	cmowcgB180
CmoCh13G000260	Watermelon (Charleston Gray)	cmowcgB184
CmoCh13G000260	Watermelon (97103) v1	cmowmB173
CmoCh13G000260	Watermelon (97103) v1	cmowmB197