CmaCh13G000380 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.GTGGAGCACAGAAGAGGAAATTCCTTCTCTTCGAAAATTGAGAGAGTCTTGGAAGAGAAAAGGAAGGGAAATGAATAAGTGGTTGAGACTGAAGAACTGAGGCATCGTCCATGGTGGGTGAGTGCCGCCATTTCCCGCTTCCACCTTTCTCGTCTTTTACCTGTGACTAAAATACTACTGACTTTCTATTTCAATAAAATTGAATCGTGGTTAGTACTAGAATAGTATCCTGCCTAGACCTGGGTTCGATCTCCGGCTGATGCATGTTTTTTTTTTATAAAATTGTTTTCCATTTTCGTTAAAATTTATAATTTTAGAAGATTATGTTTTTATATGGCTGACTTTAGACCCTTACGATCGGATGCACCTGCGCCGAATGCCCTAATTAGCCATCGTCGCTGCTCGTTCCGATTCGAGAATGAACGCATCGTTGAATTCAGGAATGGTTTTCTCTGAAGGTACATACAAAGATGGTTTTTCTGTTTTCTGTTCTTTCAAGTGATTCAATTTTCTTGAGTTCTTTGGTCACGATGTTCCTCGCAGACATAGCCGACGGAAGTGATTCGGATACGAATTCCGCTGAAGGATCGGATTACTACGAGCCGATCTCGGCCATTGATGGTGAAGAATCCGATGAAGCTGGATCAGATGACGAAACTTACAGCTCCGATACTCATTTGCACCATTTACCCAACGGTTGCCGTGTAGAGAATGCAGTTTCGTCTCTTAGCCTGAACGACGATGTGGAGAGAAGATGCAGTGATGAGGAAGAGGAGGAGAGCATGAGAGAGGCTTCTGATTCAGCGATTAGAATGGCGTTTAGAGAGGATGAGACTCGGAGAAATGCGCCGCTGTCGCCGGAGAATGCGACGAGGATCATGGAGGCCATGCGCGGCATCTCATTTGGCGGCTCTGCTCCAGATTGGACTCGGATTGTATCTGAGGATCGTTGGATTGATCAACTTCGAAGGCTTAGGCAAACCCCTACCTCTCCCAATAATTTCGGAAATTGA GTGGAGCACAGAAGAGGAAATTCCTTCTCTTCGAAAATTGAGAGAGTCTTGGAAGAGAAAAGGAAGGGAAATGAATAAGTGGTTGAGACTGAAGAACTGAGGCATCGTCCATGGTGGACCCTTACGATCGGATGCACCTGCGCCGAATGCCCTAATTAGCCATCGTCGCTGCTCGTTCCGATTCGAGAATGAACGCATCGTTGAATTCAGGAATGGTTTTCTCTGAAGACATAGCCGACGGAAGTGATTCGGATACGAATTCCGCTGAAGGATCGGATTACTACGAGCCGATCTCGGCCATTGATGGTGAAGAATCCGATGAAGCTGGATCAGATGACGAAACTTACAGCTCCGATACTCATTTGCACCATTTACCCAACGGTTGCCGTGTAGAGAATGCAGTTTCGTCTCTTAGCCTGAACGACGATGTGGAGAGAAGATGCAGTGATGAGGAAGAGGAGGAGAGCATGAGAGAGGCTTCTGATTCAGCGATTAGAATGGCGTTTAGAGAGGATGAGACTCGGAGAAATGCGCCGCTGTCGCCGGAGAATGCGACGAGGATCATGGAGGCCATGCGCGGCATCTCATTTGGCGGCTCTGCTCCAGATTGGACTCGGATTGTATCTGAGGATCGTTGGATTGATCAACTTCGAAGGCTTAGGCAAACCCCTACCTCTCCCAATAATTTCGGAAATTGA ATGAACGCATCGTTGAATTCAGGAATGGTTTTCTCTGAAGACATAGCCGACGGAAGTGATTCGGATACGAATTCCGCTGAAGGATCGGATTACTACGAGCCGATCTCGGCCATTGATGGTGAAGAATCCGATGAAGCTGGATCAGATGACGAAACTTACAGCTCCGATACTCATTTGCACCATTTACCCAACGGTTGCCGTGTAGAGAATGCAGTTTCGTCTCTTAGCCTGAACGACGATGTGGAGAGAAGATGCAGTGATGAGGAAGAGGAGGAGAGCATGAGAGAGGCTTCTGATTCAGCGATTAGAATGGCGTTTAGAGAGGATGAGACTCGGAGAAATGCGCCGCTGTCGCCGGAGAATGCGACGAGGATCATGGAGGCCATGCGCGGCATCTCATTTGGCGGCTCTGCTCCAGATTGGACTCGGATTGTATCTGAGGATCGTTGGATTGATCAACTTCGAAGGCTTAGGCAAACCCCTACCTCTCCCAATAATTTCGGAAATTGA MNASLNSGMVFSEDIADGSDSDTNSAEGSDYYEPISAIDGEESDEAGSDDETYSSDTHLHHLPNGCRVENAVSSLSLNDDVERRCSDEEEEESMREASDSAIRMAFREDETRRNAPLSPENATRIMEAMRGISFGGSAPDWTRIVSEDRWIDQLRRLRQTPTSPNNFGN
BLAST of CmaCh13G000380 vs. TrEMBL
Match: A0A0A0LXQ6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G533510 PE=4 SV=1) HSP 1 Score: 287.0 bits (733), Expect = 1.5e-74 Identity = 149/169 (88.17%), Postives = 156/169 (92.31%), Query Frame = 1
BLAST of CmaCh13G000380 vs. TrEMBL
Match: D7SJQ2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_06s0004g07370 PE=4 SV=1) HSP 1 Score: 173.7 bits (439), Expect = 1.9e-40 Identity = 100/164 (60.98%), Postives = 115/164 (70.12%), Query Frame = 1
BLAST of CmaCh13G000380 vs. TrEMBL
Match: M1D2D4_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG401031052 PE=4 SV=1) HSP 1 Score: 152.5 bits (384), Expect = 4.5e-34 Identity = 93/175 (53.14%), Postives = 118/175 (67.43%), Query Frame = 1
BLAST of CmaCh13G000380 vs. TrEMBL
Match: A0A0V0HLR2_SOLCH (Putative ovule protein OS=Solanum chacoense PE=4 SV=1) HSP 1 Score: 149.4 bits (376), Expect = 3.8e-33 Identity = 92/175 (52.57%), Postives = 116/175 (66.29%), Query Frame = 1
BLAST of CmaCh13G000380 vs. TrEMBL
Match: K4BJM8_SOLLC (Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1) HSP 1 Score: 148.7 bits (374), Expect = 6.5e-33 Identity = 93/176 (52.84%), Postives = 116/176 (65.91%), Query Frame = 1
BLAST of CmaCh13G000380 vs. TAIR10
Match: AT1G07020.1 (AT1G07020.1 unknown protein) HSP 1 Score: 112.5 bits (280), Expect = 2.6e-25 Identity = 77/148 (52.03%), Postives = 94/148 (63.51%), Query Frame = 1
BLAST of CmaCh13G000380 vs. NCBI nr
Match: gi|659114979|ref|XP_008457323.1| (PREDICTED: uncharacterized protein LOC103497044 [Cucumis melo]) HSP 1 Score: 291.2 bits (744), Expect = 1.2e-75 Identity = 151/169 (89.35%), Postives = 157/169 (92.90%), Query Frame = 1
BLAST of CmaCh13G000380 vs. NCBI nr
Match: gi|449471622|ref|XP_004153363.1| (PREDICTED: uncharacterized protein LOC101214045 [Cucumis sativus]) HSP 1 Score: 287.0 bits (733), Expect = 2.2e-74 Identity = 149/169 (88.17%), Postives = 156/169 (92.31%), Query Frame = 1
BLAST of CmaCh13G000380 vs. NCBI nr
Match: gi|359478529|ref|XP_003632127.1| (PREDICTED: uncharacterized protein LOC100251809 [Vitis vinifera]) HSP 1 Score: 175.6 bits (444), Expect = 7.1e-41 Identity = 103/174 (59.20%), Postives = 118/174 (67.82%), Query Frame = 1
BLAST of CmaCh13G000380 vs. NCBI nr
Match: gi|297745822|emb|CBI15878.3| (unnamed protein product [Vitis vinifera]) HSP 1 Score: 173.7 bits (439), Expect = 2.7e-40 Identity = 100/164 (60.98%), Postives = 115/164 (70.12%), Query Frame = 1
BLAST of CmaCh13G000380 vs. NCBI nr
Match: gi|720003591|ref|XP_010257041.1| (PREDICTED: uncharacterized protein LOC104597278 [Nelumbo nucifera]) HSP 1 Score: 153.7 bits (387), Expect = 2.9e-34 Identity = 95/172 (55.23%), Postives = 110/172 (63.95%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |