CmoCh12G011540 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh12G011540
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionRNA-binding KH domain-containing protein
LocationCmo_Chr12 : 10450013 .. 10455900 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CTCTCGACCATTGTGGCCGCACGCCTCCTCTCTCTCTCTATCTCTCTCTCTCTCTCTTCCTCGCCAAATCTCTAAAACCCTAGAAGGCAACATTCGAGGTTCCAGATTTTCCAGTTCGAATTACTCCGTTCTCTCATACTTTTTGTAACTCGCTTCGATTCTTCAGTAGGTATGATAAAATAGGCTTATTTGCTTTGTGAATTTGATGTCTAGGGTTTGTTTGTTTGTTCGCGTGCTTTGTTATCTGTTCTGTTCGTCTATGAAGTTTTTATTTTTCCGTTTATATTTGTGATGGAAGTTGCGGAATGTTTTTAGTTTGTTTGGATTGGTTTCGTTTCAGATGGGTAGGATTTATTTTGTTGGGAATAAGCCAGGAGATTTCGTGTTTCTTGGATTTTTATCGTTGACTTGGAATTTTCTAATTTTTGTATGCTCTACTGGTGGGATTTTTATCGTTCTGTCCAGAAAGGAAAATAATATATATATATAAGCTGGAAATTTCCATATTCGAACACTTGGGAGTGTATGTCTTATTGCTAATTTCACTTGTTAATATGAGTTGATGGCATGAGGATTTTCAGGGTAGTTTTATATTTGTTTACTGAAATTTTATAGGTTATGCACTTTGGTGCAAATGAGGGAAAGTTATCTATATTAATTGTTTTACTTATATATGGTACTTTGTTGCAGCTTAATCTGTAAGGAACACATGGCTGATGTGGAACAGAGCTACACGCATGTCGACGATAATGAAGTTGATGAGACTGCACAAATATATGAGAACGCACAAATATATGAGAATGCTCAGGTACAGGACAATACACTAGAACAGGAGAGTACAGAGGAGCCAGAAAACTTGCACGGACTTGAGAATGAAAATGGACCAGAAACCTTAGAGTTGGAGCCAAAAGAGGTGCATAATGAGGATACTCTGGCTGTAGTAGGTGAGAAGAAGTGGCCTGGATGGCCAGGAGAGAGTGTTTTTCGAATGTTGGTTCCTGCTCAAAAGGTTGGTAGTATAATTGGTCGCAAAGGTGAGTTCATCAAGAAAATAGTTGAGGAAACAAGAGCTCGGATTAAAATTCTTGACGGTCCTCCTGGAACGGCTGAAAGAGCTGTAAGTTTTCCTTCCTCCAGATAAGAACTTTTCTTTAATAATTTAGCTAGTATTTTTGTGAAAATTATTTGGATTTAAGGAGGTGCAAATGATTTAATATCAAATTAATAGTATCTATCCAGTTTTTTTTTATATATAATTTTTTTTTTATTCTAATGGATATTGATGATTCATTAACAATTATTGTTTTAGGTTTTCTTAATTTTGTATTCTCAATATGTATAGCACCTTGCTTCAAGGTAGGCAAATATTGGGCATTATATTGCCTAATTAGCCCAATCTGGTCGAGCATCAAGTTTGGGTGATTATTTTTAGTTAGTTGTTTAATCTTGATTGTACTCCTGTTATATTCAAGCATGTGGCATCAGTTATATGGCTGTGCAATGATGGAAATATGACACTAAAAAGAAAATTCAGACCTTAAAGAGTTAATAAAATATTATCAATAATAACTTGATTAGAACTTGTACTAAAAGCCATTAAATCGTTGATTAAAAAAAAAAAGTTAATAGTCTAAAATTCTTTCGAGTCATGGAACAAACATTTGATTATAGGAAACCATTCGACACACTTAAAATGGATCTGCTAAGACTTATGGGGAAGATTGAACTCCATCTTTCAAGATATCTGTGCTTCTACACCCCATCAATGACTACTAAACTGATTCTCTTACAGCTCTATAACTGCCATAAGGAAGTGTCCAGAAACTAAGATTAACCCTTTAAACTCATAAAAGCAAAATCATAACTAAAACAGAAAGGAATGTAAGAGTATTCCAGGTAATCCCGAATATGGATACAGTTGCCTTGATTGTAGTAACAAAAAATGAATCTGTGCAGGTTGTGTGCAAAATTTAAGGCAACTACTCAATCTTCAATAGGATCCCATATTTGAAGAACCAAAGATCCAGATGCGGAGATCAGCATTCAACATTACAAAGTTCTGAAAAGTTGATCTGAATAAAGGCATCTGGAACTTTTGTACCATGAAGCACTGCAATATCTCTGGTAACTTCAGATCTGAAGGTTGATGTCAAGATTTCCAACGGGATAATAATATGAAAAATGGAGAAAACATGATGATAAATGTTAAGAGTTAAAACTTTTAGTAATTAAAAGATGTTTATACACGATTAAAGATCTGCTTAAAATATAAATTGAGGCACTAAAACTGGCCTATCAATATCGAATAGAAGTGATGTATTTTTGCTTATGCTTCTATTGTGTCTTTGCCAGTAACTGGGTCTATAATCCAACAACATATAAGGTAATGTGAAAACCTGAACTCATTAATTTAAGGAGGAAAACATAACTATATTATCTAGTTTCTTGAAACATAGAAAGCTGGTAAATTTCAGCATTTGCCCTCAGATGTATATGCGGCCTCTAAGTTGTCTCTGGCATGATATATAGGAAGAAATCATCCACCATTTTGGCCGTTGCCTTTTCAGATATATAGTTTGGGAGAAACTATTTTTGAATTGTTTGGTCTGCCTTTTAGTTTTGGCAACTTTATTATTCTAATTGCAAGGTGCTCAACATTCGATGAAGAAGTTAAGCACGTTTGATGACTAAGGGCTTGGACACCTAGTGAGAGATCTAAATGGAAATTAATATGAATAGTTTTTTATTTTTTTTTTATTTTTTTTATTTTTATGGTTCTCACTTGCAGATAGATTTAATTTTTCGTTGTAGACCATACAAATTGGGAGGTGCTCTTTTTGTTATTTCCATTTTTTTCTACTATTGGATGCACAACACGATCCATCAATATGCATATATCATTTGATACAATTGGAAGTTTGTGCAAGTAAATTGATCTGCTAGTGTATTTAATAGTGAATTTGTATCATTATAAGTTTTGGATGGTGATCCTTGGTTATTTTCTTATAGATATTATGAACTAAACCTATCTTTTCATTGGTTGGGCTTTTTTTTTTTGTGTTTTCCTTGTCGTGAGCTCATTAGCTGTCTCTGGAATTCGACAAATTGTTTTTGCTTTTTATTTGTTATATGAGTGATTCTGTCTTTGTAGAATGGGGAATTTCAGGTTCCAGTACTTCATAATACTCATTTGATTTGTTTTTTTGTTGTTGTGATAATTGGTCAATTTATGATGAAAATTTGTAGTTTTCACAAGATGGTATGCTTCATTTAATAGGTAATGGTGTCTGCGAAGGAGGAACCCGATTCTGATTTTCCTCCTGCGGTGGATGGACTTCTGAGGGTTCATAAACGTATTGTTGATGGTCTGGAGGGTGATAATGCTAATGCTCCCAACATGGGAGGCAAAGTCTCAACGAGACTGCTAGTCGCAGCTTCACAAGCAGGAAGTTTAATCGGGAAGCAGGGAGGGACCGTTAAATCCATTCAAGAAGAGTCAAATTGTATAGTTAGAGTTCTTGGATCAGGTGGACTTCTCTGGATGTCATTTGATTCTCTGCTTTATCGTTTTTAAACTATGTTCTTCATTGGTTTCTGAGTTGATAATTATACACTCCATTTTGGTTTTCCATTTTCATTGCATTCTTATACTTGTCACCCGGGAACTTTCTGCAGAAGATTTGCCTGTTTTTGCTCTCCAAGACGATAGAGTTGTTGAAGTACTAGGCGATCCAGCTGGTGTGCACAAAGCCGTGGAACTCATTGCTTCTCATCTGAGAAAGTTTCTGGTTGACCGAAGCATTATCCCGGTTTTTGAAATGAATGTGAGTATGATTTCCTAATGATTTTTCGAACACTTCTACTTTTAATAGTATTGAAGTCTTAAACAAACATTCCTATTCTTCCTTCCAACCCAAATGCCCAAAATCAGATGCAGATGACAAATCAACAGATGGAGCACATGCCACCACCACACCAATCTTGGGGCCCGCCTCAAGGAATGCCACCAAATGCTGGGGGTGGTCCTGGCTTCGGACCGAATCCTCCATACATGCCACCACCTCGTCAATTCGACAATTATTATCCACCTGCTGATATGCCATCGGCTATGGATAAGCAACCTCATCATGGAATTTCTGCTTATGGTAGGGAAGCTCCTATGGGTGTTCATCCGCAAACAAATGCACAGTCGGTGCCTTCAATTGTCACACAGGTTTGATAAGCCTTTCAAGTATTTCCCATTTTTTTTTATTGATAAGACCAGAAACAAGTTAACTGCATGCCATCATCTGTTGAGTCATCGTGTTACAATTGTCTGCCCATTAAACACTTGCCATTTCGCACGATACCAAGGTTCCTTAGATCTCCATTTTTCCTCCATAGTTGGGAGAACCCTTGAGGACTTGGTGAATATTTTATGACATTCAGAATGTTTTTTTGTTGTACTTGCATTGCAGACAACCCAACAAATGCAGATTCCGTTATCTTTTGCTGACGCTGTCATCGGAACTGCTGGCGCTAGTATAAGCTACATTCGTCGTGCTAGCGGGGCTACCGTTACTATCCAAGAAACGAGGGGAGTCCCTGGGGAAATGACGGTAGAAATGAGTGGAACTGCTTCTCAAGTTCAAGCAGCCCAGCAGCTTATACAGGCAATTCTTTTTTCTTGCTTGTTTCGATTTTGCATTTTCTTAATGAAAACACTAAATATAATGTCATCTTCTTGATGATTTTGCATCGTTTCCTTTATTTTCGGAGATAAATCGCATCGTCATAGTTTCTTAAACATACTCATTAGACCTGATCAATATTAATTTGAAGGCCACGTTTTCTGCTCAGGCGATGCAATCTATTCCCTTCAACATTCTTTTTTTTAATTGTGTTGCAGAATTTTATGGCTGGTGCTGGAGCTCCAGCGCAGACTCAAGCTGGGGGTTCGGCAGACCAAGGGTACAACTCTTACGCTGCTCACGGTTCAGTCTACGCGTCACCCCCTGCAGCAAACCCAGCTCATGCAAGTCATGCCGGAGGCTATGGCTCTGTCTACAGTACGAATTACGGGTACTAAGCCAGCCTTTGTACGATGTAAAATTCTCCCCAACTTGGCGTGGTTGCGGCGAAGATGGCATTGGTCACTCAAAACCTCCATCATTAGTAAGCTTTGCATCATGTAGCTTCCTTTTAAACAGATTCTACCTGAAAACCTTTTGAACCATTCTGCATTAGTAGCCTATTTGTATGATTTAGCACGAAATCTCTCTCTGAAATTTAGCACCAAGTTCTTTTCTTTTACTTATAACATGTGATGATGAACGGACATTTTAAGAGGAGCTGCTATGCTGTCGTACCCGAAAAATCGAAGAAGAATGAGATTAGAGTATCTATTAGATCCTTTTTAAAATGCAGGTGTTGAATGGCTGCTGCGGTTGGAGCTAACTAATGAGATTAGAGTATCTACCCCAAGGCAAGCCTCTCTCCTTTGCTTTTGATTCTTAGTGTTCTTATTTGTTTTGTTTTTGTTTCTGTTTCAAAGACTACCAAATAACATTTTTTTTTGTTCGAAATGATGATAAAATAAAGTCGTGATTATGATTTGTAAAATGGTGAGCGATTTGCGATCGACTTAGTGGTCTTTGATGATATAAGTTGGAATGGGTTCAATTCATGGAAGAAGTCGATACACTTTGTTTTGATGGATTTCGTTGTCGGCCAAATGTTATACTATAAGAACGAGTTTCATTCGTTGTCGGCCAAATGTTATACTATAAGAACGAGTTTCATTTGTACCTTACGATTAGAAGTTGATACGAGTTTCATTCTTGTATTCTTGACTTGTGCATGACCAAATAGGAAACTTAAATGGGACCAAATGTCTGTTCGCCCTTTAT

mRNA sequence

CTCTCGACCATTGTGGCCGCACGCCTCCTCTCTCTCTCTATCTCTCTCTCTCTCTCTTCCTCGCCAAATCTCTAAAACCCTAGAAGGCAACATTCGAGGTTCCAGATTTTCCAGTTCGAATTACTCCGTTCTCTCATACTTTTTGTAACTCGCTTCGATTCTTCAGTAGCTTAATCTGTAAGGAACACATGGCTGATGTGGAACAGAGCTACACGCATGTCGACGATAATGAAGTTGATGAGACTGCACAAATATATGAGAACGCACAAATATATGAGAATGCTCAGGTACAGGACAATACACTAGAACAGGAGAGTACAGAGGAGCCAGAAAACTTGCACGGACTTGAGAATGAAAATGGACCAGAAACCTTAGAGTTGGAGCCAAAAGAGGTGCATAATGAGGATACTCTGGCTGTAGTAGGTGAGAAGAAGTGGCCTGGATGGCCAGGAGAGAGTGTTTTTCGAATGTTGGTTCCTGCTCAAAAGGTTGGTAGTATAATTGGTCGCAAAGGTGAGTTCATCAAGAAAATAGTTGAGGAAACAAGAGCTCGGATTAAAATTCTTGACGGTCCTCCTGGAACGGCTGAAAGAGCTGTAATGGTGTCTGCGAAGGAGGAACCCGATTCTGATTTTCCTCCTGCGGTGGATGGACTTCTGAGGGTTCATAAACGTATTGTTGATGGTCTGGAGGGTGATAATGCTAATGCTCCCAACATGGGAGGCAAAGTCTCAACGAGACTGCTAGTCGCAGCTTCACAAGCAGGAAGTTTAATCGGGAAGCAGGGAGGGACCGTTAAATCCATTCAAGAAGAGTCAAATTGTATAGTTAGAGTTCTTGGATCAGAAGATTTGCCTGTTTTTGCTCTCCAAGACGATAGAGTTGTTGAAGTACTAGGCGATCCAGCTGGTGTGCACAAAGCCGTGGAACTCATTGCTTCTCATCTGAGAAAGTTTCTGGTTGACCGAAGCATTATCCCGGTTTTTGAAATGAATATGCAGATGACAAATCAACAGATGGAGCACATGCCACCACCACACCAATCTTGGGGCCCGCCTCAAGGAATGCCACCAAATGCTGGGGGTGGTCCTGGCTTCGGACCGAATCCTCCATACATGCCACCACCTCGTCAATTCGACAATTATTATCCACCTGCTGATATGCCATCGGCTATGGATAAGCAACCTCATCATGGAATTTCTGCTTATGGTAGGGAAGCTCCTATGGGTGTTCATCCGCAAACAAATGCACAGTCGGTGCCTTCAATTGTCACACAGACAACCCAACAAATGCAGATTCCGTTATCTTTTGCTGACGCTGTCATCGGAACTGCTGGCGCTAGTATAAGCTACATTCGTCGTGCTAGCGGGGCTACCGTTACTATCCAAGAAACGAGGGGAGTCCCTGGGGAAATGACGAATTTTATGGCTGGTGCTGGAGCTCCAGCGCAGACTCAAGCTGGGGGTTCGGCAGACCAAGGGTACAACTCTTACGCTGCTCACGGTTCAGTCTACGCGTCACCCCCTGCAGCAAACCCAGCTCATGCAAGTCATGCCGGAGGCTATGGCTCTGTCTACAGTACGAATTACGGGTACTAAGCCAGCCTTTGTACGATGTAAAATTCTCCCCAACTTGGCGTGGTTGCGGCGAAGATGGCATTGGTCACTCAAAACCTCCATCATTAGTGTTGAATGGCTGCTGCGGTTGGAGCTAACTAATGAGATTAGAGTATCTACCCCAAGGCAAGCCTCTCTCCTTTGCTTTTGATTCTTAGTGTTCTTATTTGTTTTGTTTTTGTTTCTGTTTCAAAGACTACCAAATAACATTTTTTTTTGTTCGAAATGATGATAAAATAAAGTCGTGATTATGATTTGTAAAATGGTGAGCGATTTGCGATCGACTTAGTGGTCTTTGATGATATAAGTTGGAATGGGTTCAATTCATGGAAGAAGTCGATACACTTTGTTTTGATGGATTTCGTTGTCGGCCAAATGTTATACTATAAGAACGAGTTTCATTCGTTGTCGGCCAAATGTTATACTATAAGAACGAGTTTCATTTGTACCTTACGATTAGAAGTTGATACGAGTTTCATTCTTGTATTCTTGACTTGTGCATGACCAAATAGGAAACTTAAATGGGACCAAATGTCTGTTCGCCCTTTAT

Coding sequence (CDS)

ATGGCTGATGTGGAACAGAGCTACACGCATGTCGACGATAATGAAGTTGATGAGACTGCACAAATATATGAGAACGCACAAATATATGAGAATGCTCAGGTACAGGACAATACACTAGAACAGGAGAGTACAGAGGAGCCAGAAAACTTGCACGGACTTGAGAATGAAAATGGACCAGAAACCTTAGAGTTGGAGCCAAAAGAGGTGCATAATGAGGATACTCTGGCTGTAGTAGGTGAGAAGAAGTGGCCTGGATGGCCAGGAGAGAGTGTTTTTCGAATGTTGGTTCCTGCTCAAAAGGTTGGTAGTATAATTGGTCGCAAAGGTGAGTTCATCAAGAAAATAGTTGAGGAAACAAGAGCTCGGATTAAAATTCTTGACGGTCCTCCTGGAACGGCTGAAAGAGCTGTAATGGTGTCTGCGAAGGAGGAACCCGATTCTGATTTTCCTCCTGCGGTGGATGGACTTCTGAGGGTTCATAAACGTATTGTTGATGGTCTGGAGGGTGATAATGCTAATGCTCCCAACATGGGAGGCAAAGTCTCAACGAGACTGCTAGTCGCAGCTTCACAAGCAGGAAGTTTAATCGGGAAGCAGGGAGGGACCGTTAAATCCATTCAAGAAGAGTCAAATTGTATAGTTAGAGTTCTTGGATCAGAAGATTTGCCTGTTTTTGCTCTCCAAGACGATAGAGTTGTTGAAGTACTAGGCGATCCAGCTGGTGTGCACAAAGCCGTGGAACTCATTGCTTCTCATCTGAGAAAGTTTCTGGTTGACCGAAGCATTATCCCGGTTTTTGAAATGAATATGCAGATGACAAATCAACAGATGGAGCACATGCCACCACCACACCAATCTTGGGGCCCGCCTCAAGGAATGCCACCAAATGCTGGGGGTGGTCCTGGCTTCGGACCGAATCCTCCATACATGCCACCACCTCGTCAATTCGACAATTATTATCCACCTGCTGATATGCCATCGGCTATGGATAAGCAACCTCATCATGGAATTTCTGCTTATGGTAGGGAAGCTCCTATGGGTGTTCATCCGCAAACAAATGCACAGTCGGTGCCTTCAATTGTCACACAGACAACCCAACAAATGCAGATTCCGTTATCTTTTGCTGACGCTGTCATCGGAACTGCTGGCGCTAGTATAAGCTACATTCGTCGTGCTAGCGGGGCTACCGTTACTATCCAAGAAACGAGGGGAGTCCCTGGGGAAATGACGAATTTTATGGCTGGTGCTGGAGCTCCAGCGCAGACTCAAGCTGGGGGTTCGGCAGACCAAGGGTACAACTCTTACGCTGCTCACGGTTCAGTCTACGCGTCACCCCCTGCAGCAAACCCAGCTCATGCAAGTCATGCCGGAGGCTATGGCTCTGTCTACAGTACGAATTACGGGTACTAA
Homology
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BLAST of CmoCh12G011540 vs. Swiss-Prot
Match: FLK_ARATH (Flowering locus K homology domain OS=Arabidopsis thaliana GN=FLK PE=1 SV=1)

HSP 1 Score: 520.4 bits (1339), Expect = 2.1e-146
Identity = 300/472 (63.56%), Postives = 341/472 (72.25%), Query Frame = 1 

Query: 21  QIYENAQIYENAQVQDNTLEQESTEEPENLHGLENENG-PETLELEPKEVHNEDTLAVVG 80
           + ++ AQ      VQD+  ++   +       +E+E G PE LE   K    ED      
Sbjct: 124 EAHDQAQYQAQGDVQDHNGDEVQDK-------VEDEEGIPEHLESLQKSEPEEDATVGGE 183

Query: 81  EKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTAERAVMV 140
           EK+WPGWPGE+VFRMLVPAQKVGSIIGRKG+ IKKIVEETRARIKILDGPPGT ERAVMV
Sbjct: 184 EKRWPGWPGETVFRMLVPAQKVGSIIGRKGDVIKKIVEETRARIKILDGPPGTTERAVMV 243

Query: 141 SAKEEPDSDFPPAVDGLLRVHKRIVDGLEGDNANAPNMGGKVSTRLLVAASQAGSLIGKQ 200
           S KEEP+S  PP++DGLLRVH RIVDGL+G+ + AP    KVSTRLLV ASQAGSLIGKQ
Sbjct: 244 SGKEEPESSLPPSMDGLLRVHMRIVDGLDGEASQAPPPS-KVSTRLLVPASQAGSLIGKQ 303

Query: 201 GGTVKSIQEESNCIVRVLGSEDLPVFALQDDRVVEVLGDPAGVHKAVELIASHLRKFLVD 260
           GGTVK+IQE S CIVRVLGSEDLPVFALQDDRVVEV+G+P  VH+A+ELIASHLRKFLVD
Sbjct: 304 GGTVKAIQEASACIVRVLGSEDLPVFALQDDRVVEVVGEPTSVHRALELIASHLRKFLVD 363

Query: 261 RSIIPVFEMNMQMTNQQMEHMPPPHQSWGPPQGMPPNAGGGPGFGPN-PPYMPPPRQFDN 320
           RSIIP FE  MQ   +QM+HMPPPHQSWGPPQG  P+ GGG G+G N PPYM PP + D+
Sbjct: 364 RSIIPFFENQMQKPTRQMDHMPPPHQSWGPPQGHAPSVGGG-GYGHNPPPYMQPPPRHDS 423

Query: 321 YYPPADM-PSAMDKQPHHGISAYGREAPMGVHPQTNAQSVPSIVTQTTQQMQIPLSFADA 380
           YYPP +M    M+KQPH GISAYGRE PM VH    + + P +  Q TQQMQIPLS+ADA
Sbjct: 424 YYPPPEMRQPPMEKQPHQGISAYGREPPMNVHV---SSAPPMVAQQVTQQMQIPLSYADA 483

Query: 381 VIGTAGASISYIRRASGATVTIQETRGVPGEMT------------------NFM--AGAG 440
           VIGT+G++ISY RR SGATVTIQETRGVPGEMT                  NFM  AGA 
Sbjct: 484 VIGTSGSNISYTRRLSGATVTIQETRGVPGEMTVEVSGTGSQVQTAVQLIQNFMAEAGAP 543

Query: 441 APAQTQAGGSADQGYNSYAAHGSVYASPPAANPAHASHAGGYGSVYSTNYGY 470
           APAQ Q      QGYN YA HGSVYA+ P   P      GGY + YS+ YGY
Sbjct: 544 APAQPQTVAPEQQGYNPYATHGSVYAAAPTNPP------GGYATDYSSGYGY 577

[Close]
BLAST of CmoCh12G011540 vs. Swiss-Prot
Match: PEP_ARATH (RNA-binding KH domain-containing protein PEPPER OS=Arabidopsis thaliana GN=PEP PE=1 SV=1)

HSP 1 Score: 236.9 bits (603), Expect = 4.5e-61
Identity = 145/349 (41.55%), Postives = 211/349 (60.46%), Query Frame = 1 

Query: 80  EKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTAERAVMV 139
           E++WPGWPG+ VFRM+VP  KVG+IIGRKG+FIKK+ EETRARIK+LDGP  T +R V++
Sbjct: 64  EERWPGWPGDCVFRMIVPVTKVGAIIGRKGDFIKKMCEETRARIKVLDGPVNTPDRIVLI 123

Query: 140 SAKEEPDSDFPPAVDGLLRVHKRIVDGLEGDNANAPNMGGKVST-RLLVAASQAGSLIGK 199
           S KEEP++   PA+D +LRV +R+    + D+ +  N G   S+ RLLVA++QA +LIGK
Sbjct: 124 SGKEEPEAYMSPAMDAVLRVFRRVSGLPDNDDDDVQNAGSVFSSVRLLVASTQAINLIGK 183

Query: 200 QGGTVKSIQEESNCIVRVLGSEDLPVFALQDDRVVEVLGDPAGVHKAVELIASHLRKFLV 259
           QG  +KSI E S   VR+L  E+ P +A QD+R+V++ G+   + KA+E I  HLR+FLV
Sbjct: 184 QGSLIKSIVENSGASVRILSEEETPFYAAQDERIVDLQGEALKILKALEAIVGHLRRFLV 243

Query: 260 DRSIIPVFEMNMQMTNQQMEHMPPPHQSWGPPQGMPPNAGGGPGFG----PNPPYMPPPR 319
           D +++P+FE        Q     P  +S      +  N    P F       P ++    
Sbjct: 244 DHTVVPLFEKQYLARVSQTRQEEPLAESKSSLHTISSNL-MEPDFSLLARREPLFLERDS 303

Query: 320 QFDNYYPPADMPSAMDKQPHHGISAYGREAPMGV-HPQTNAQSVPSIVTQTTQQMQIPLS 379
           + D+   P+            G+S Y ++  +   H    A+   + VTQ +Q MQIP S
Sbjct: 304 RVDSRVQPS------------GVSIYSQDPVLSARHSPGLARVSSAFVTQVSQTMQIPFS 363

Query: 380 FADAVIGTAGASISYIRRASGATVTIQETRGVPGEMTNFMAGAGAPAQT 423
           +A+ +IG  GA+I+YIRR SGAT+TI+E+   P ++T  + G  +  QT
Sbjct: 364 YAEDIIGVEGANIAYIRRRSGATITIKESPH-PDQITVEIKGTTSQVQT 398

[Close]
BLAST of CmoCh12G011540 vs. Swiss-Prot
Match: HEN4_ARATH (KH domain-containing protein HEN4 OS=Arabidopsis thaliana GN=HEN4 PE=1 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 2.7e-13
Identity = 54/179 (30.17%), Postives = 92/179 (51.40%), Query Frame = 1 

Query: 88  GESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTAERAVMVSAKEEPDS 147
           G + FR+L P   VG++IG+ G  IK++ + T A+I++ + P G+ +R + + A+ +  S
Sbjct: 45  GHAAFRLLCPLSHVGAVIGKSGNVIKQLQQSTGAKIRVEEPPSGSPDRVITIIAQADSKS 104

Query: 148 DFPPA------VDGLLRVHKRIVDGLEGDNANAPNMGGK------VSTRLLVAASQAGSL 207
                       +G  +  +  V   +G       +         V  RLL  +S AG++
Sbjct: 105 RVKLGANNNGNAEGEKKEEEVEVSKAQGALIKVFELLAAEADSDTVVCRLLTESSHAGAV 164

Query: 208 IGKQGGTVKSIQEESNCIVRVLGSEDLPVFALQDDRVVEVLGDPAGVHKAVELIASHLR 255
           IGK G  V SI++E+ C + +   E+LP+ A  DD +VEV G+   V KA+  I+  L+
Sbjct: 165 IGKGGQMVGSIRKETGCKISI-RIENLPICADTDDEMVEVEGNAIAVKKALVSISRCLQ 222

[Close]
BLAST of CmoCh12G011540 vs. Swiss-Prot
Match: Y4837_ARATH (KH domain-containing protein At4g18375 OS=Arabidopsis thaliana GN=At4g18375 PE=2 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 6.0e-13
Identity = 93/339 (27.43%), Postives = 152/339 (44.84%), Query Frame = 1 

Query: 91  VFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTAERAVMV--SAKEEPD-- 150
           V+R+L P   VG +IG+ G+ I  I   T+A+IK+ D   G ++R + +  S KE+ +  
Sbjct: 37  VYRILCPIDVVGGVIGKSGKVINAIRHNTKAKIKVFDQLHGCSQRVITIYCSVKEKQEEI 96

Query: 151 ----SDFPP---AVDGLLRVHKRIVDGLEGDNANA-PNMGGKVSTRLLVAASQAGSLIGK 210
               S+  P   A D LL+V+  IV   E +N     +       RLLV  SQ+ SLIGK
Sbjct: 97  GFTKSENEPLCCAQDALLKVYDAIVASDEENNTKTNVDRDDNKECRLLVPFSQSSSLIGK 156

Query: 211 QGGTVKSIQEESNCIVRVLG---SEDLPVFALQDDRVVEVLGDPAGVHKAVELIASHLRK 270
            G  +K I+  +   V+V+    S+   V A++ D VV + G+P  V +A+  +++ + K
Sbjct: 157 AGENIKRIRRRTRASVKVVSKDVSDPSHVCAMEYDNVVVISGEPESVKQALFAVSAIMYK 216

Query: 271 FLVDRSIIPVFEMNMQMTNQQMEHMPPPHQSWGPPQGMPPNAGGGPGFGPNPPYMPPPRQ 330
                 I P   + +  T+Q +     P  S   P  +  +     GF  N  ++     
Sbjct: 217 ------INPRENIPLDSTSQDV-----PAASVIVPSDLSNSVYPQTGFYSNQDHI----- 276

Query: 331 FDNYYPPADMPSAMDKQPHHGISAYGREA--PMGVH----PQTNAQSVPSIVTQTTQQMQ 390
                  A +PS  +         Y   A  P+ V     P T+     S   +   ++ 
Sbjct: 277 ---LQQGAGVPSYFNALSVSDFQGYAETAANPVPVFASSLPVTHGFGGSSRSEELVFKVL 336

Query: 391 IPLSFADAVIGTAGASISYIRRASGATVTIQETRGVPGE 409
            PL     VIG  G++I  IR ASG+ + + ++R   G+
Sbjct: 337 CPLCNIMRVIGKGGSTIKRIREASGSCIEVNDSRTKCGD 356

[Close]
BLAST of CmoCh12G011540 vs. Swiss-Prot
Match: NOVA2_HUMAN (RNA-binding protein Nova-2 OS=Homo sapiens GN=NOVA2 PE=1 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 1.0e-12
Identity = 58/178 (32.58%), Postives = 87/178 (48.88%), Query Frame = 1 

Query: 85  GWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKI---LDGPPGTAERAVMVSA 144
           G  GE   ++L+P+   GSIIG+ G+ I ++ +ET A IK+    D  PGT ER  +V  
Sbjct: 28  GEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQG 87

Query: 145 KEEPDSDFPPAVDGLLRVHKRIVDGLEGDNANAP----NMGGKVSTRLLVAASQAGSLIG 204
             E  +     +   +R   + +   E  N   P    N       +L+V  S AG +IG
Sbjct: 88  TAEALNAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIG 147

Query: 205 KQGGTVKSIQEESNCIVRVLGSEDLPVFALQDDRVVEVLGDPAGVHKAVELIASHLRK 256
           K G TVK++ E+S   V++      P      +RVV V G+P  VHKAV  I   +++
Sbjct: 148 KGGATVKAVMEQSGAWVQL---SQKPEGINLQERVVTVSGEPEQVHKAVSAIVQKVQE 202

[Close]
BLAST of CmoCh12G011540 vs. TrEMBL
Match: A0A0A0LJ91_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G010230 PE=4 SV=1)

HSP 1 Score: 765.0 bits (1974), Expect = 5.3e-218
Identity = 418/492 (84.96%), Postives = 435/492 (88.41%), Query Frame = 1 

Query: 1   MADVEQSYTHV-DDNEVDETAQIYENAQIYENAQVQDNTLEQESTEEPENLHGLENENGP 60
           MADVEQ+YTHV DD++VD      ENAQIYENAQV D TLEQE+ +E ENLH L+NE+ P
Sbjct: 27  MADVEQNYTHVVDDDQVD------ENAQIYENAQVHDITLEQENAQEVENLHELQNEHIP 86

Query: 61  ETLELEPKEVHNEDTLAVVGEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEET 120
           ETLE EPK+VH ED L VV EKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEET
Sbjct: 87  ETLESEPKQVHIEDPLTVVSEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEET 146

Query: 121 RARIKILDGPPGTAERAVMVSAKEEPDSDFPPAVDGLLRVHKRIVDGLEGDNANAPNMGG 180
           RARIKILDGPPGTAERAVMVSAK+EPDS FPPAVDGLLRVHKRIVDGLEGDNA+APN G 
Sbjct: 147 RARIKILDGPPGTAERAVMVSAKDEPDSAFPPAVDGLLRVHKRIVDGLEGDNAHAPNAGS 206

Query: 181 KVSTRLLVAASQAGSLIGKQGGTVKSIQEESNCIVRVLGSEDLPVFALQDDRVVEVLGDP 240
           KVSTRLLVAASQAGSLIGKQGGTVKSIQEESNCIVRVLGSEDLPVFALQDDRVVEVLGDP
Sbjct: 207 KVSTRLLVAASQAGSLIGKQGGTVKSIQEESNCIVRVLGSEDLPVFALQDDRVVEVLGDP 266

Query: 241 AGVHKAVELIASHLRKFLVDRSIIPVFEMNMQMTNQQM-EHM-PPPHQSWGPPQGMPPNA 300
           AGVHKAVELIASHLRKFLVDRSIIPVFEMNMQM+N QM +HM PPPHQ WGPPQGMPPNA
Sbjct: 267 AGVHKAVELIASHLRKFLVDRSIIPVFEMNMQMSNPQMDQHMPPPPHQPWGPPQGMPPNA 326

Query: 301 GGGPGFGPNPP-YM-PPPRQFDNYYPPADMPSAMDKQPHHGISAYGREAPMGVHPQTNAQ 360
           GGGPGFGPNPP YM PPPRQFDNYYPPA+M + M+KQPHHGISAYGREAPMGVH  +NAQ
Sbjct: 327 GGGPGFGPNPPQYMPPPPRQFDNYYPPAEMQAVMEKQPHHGISAYGREAPMGVHAASNAQ 386

Query: 361 SVPSIVTQTTQQMQIPLSFADAVIGTAGASISYIRRASGATVTIQETRGVPGEMT----- 420
           S PSIVTQTTQQMQIPLSFADAVIGTAGASISYIRRASGATVTIQETRGVPGEMT     
Sbjct: 387 SAPSIVTQTTQQMQIPLSFADAVIGTAGASISYIRRASGATVTIQETRGVPGEMTVEMSG 446

Query: 421 -------------NFMAGAGAPAQTQAGGSADQGYNSYAAHGSVYASPPAANPAHASHAG 470
                        NFMAGAGAPAQ QAG S DQGYNSYAAHGSVYASPP ANP  A+HAG
Sbjct: 447 TASQVQAAQQLIQNFMAGAGAPAQPQAGVSTDQGYNSYAAHGSVYASPP-ANP--AAHAG 506

[Close]
BLAST of CmoCh12G011540 vs. TrEMBL
Match: M5VXP2_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa003484mg PE=4 SV=1)

HSP 1 Score: 651.4 bits (1679), Expect = 8.6e-184
Identity = 354/478 (74.06%), Postives = 384/478 (80.33%), Query Frame = 1 

Query: 20  AQIYENAQIYENAQVQDNTLEQESTEEPENLHGLENENGPETLELEPKEVH--------N 79
           AQ  E A     A  Q+  L Q    E E    L      E +E++ +E+H        +
Sbjct: 98  AQEQEQALAQLQAHEQEQALAQLQAHEQEQ--ALAQFQAQEEVEVQEEELHVREHNQEQH 157

Query: 80  EDTLAVVGEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPG 139
           ED +   GEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPG
Sbjct: 158 EDAVVGGGEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPG 217

Query: 140 TAERAVMVSAKEEPDSDFPPAVDGLLRVHKRIVDGLEGDNANAP-NMGGKVSTRLLVAAS 199
           T ERAVMVSAKEEPDS FPPA+DGLLRVHKRI+DGL+GD+++AP  MGGKVSTRLLVAAS
Sbjct: 218 TTERAVMVSAKEEPDSSFPPAMDGLLRVHKRIIDGLDGDSSHAPPGMGGKVSTRLLVAAS 277

Query: 200 QAGSLIGKQGGTVKSIQEESNCIVRVLGSEDLPVFALQDDRVVEVLGDPAGVHKAVELIA 259
           QAGSLIGKQGGTVKSIQE SNCIVRVLG+EDLP+FALQDDRVVEV+GD  GVHKA+ELIA
Sbjct: 278 QAGSLIGKQGGTVKSIQESSNCIVRVLGAEDLPIFALQDDRVVEVVGDAVGVHKAIELIA 337

Query: 260 SHLRKFLVDRSIIPVFEMNMQMTNQQMEHMPPPHQSWGPPQGMPPNAGGGPGFGP-NPPY 319
           SHLRKFLVDRSIIP+FEM+MQM N QMEH PP HQ WGPPQG+P NAGGGPGFGP NP Y
Sbjct: 338 SHLRKFLVDRSIIPIFEMHMQMANPQMEHAPP-HQQWGPPQGLPHNAGGGPGFGPPNPQY 397

Query: 320 MPPPRQFDNYYPPADMPSAMDKQPHHGISAYGREAPMGVHPQTNAQSVPSIVTQTTQQMQ 379
           MPPPRQ DNYYPPADMP  ++KQPHHGISAYGREAPMGVH  +NAQS PS+VTQ TQQMQ
Sbjct: 398 MPPPRQHDNYYPPADMPPPIEKQPHHGISAYGREAPMGVHQSSNAQSAPSMVTQITQQMQ 457

Query: 380 IPLSFADAVIGTAGASISYIRRASGATVTIQETRGVPGEMT------------------N 439
           IPLS+ADAVIGTAGASISYIRRASGATVTIQETRGVPGEMT                  N
Sbjct: 458 IPLSYADAVIGTAGASISYIRRASGATVTIQETRGVPGEMTVEISGSASQVQAAQQLIQN 517

Query: 440 FMAGAGAPAQTQAGGSADQGYNSYAAHGSVYASPPAANPAHASHAGGYGSVYSTNYGY 470
           FMA AGAP  TQ  GS DQGYNSYAAHGSVY+SPP +N  HA H GGYGSVY ++YGY
Sbjct: 518 FMADAGAPQPTQTAGSVDQGYNSYAAHGSVYSSPP-SNQGHAGHTGGYGSVYGSHYGY 571

[Close]
BLAST of CmoCh12G011540 vs. TrEMBL
Match: A0A067JUM6_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23518 PE=4 SV=1)

HSP 1 Score: 649.4 bits (1674), Expect = 3.3e-183
Identity = 349/485 (71.96%), Postives = 386/485 (79.59%), Query Frame = 1 

Query: 4   VEQSYTHVDDNEVDETAQIYENAQIYENAQVQDNTLEQESTEEPENLHGLENENGPETLE 63
           ++ +  H  +  +D T    +   I  N    D  L+Q      EN      +  PE  +
Sbjct: 81  IDHNLDHAVNQGLDHTTD--DGLSIDHNV---DQALDQNVDHTAENNMDHAEDQVPEDFQ 140

Query: 64  LEPKEVHNEDTLAVVGEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARI 123
           ++ K+ H+EDT+A  GEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARI
Sbjct: 141 VQEKQGHHEDTVAAGGEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARI 200

Query: 124 KILDGPPGTAERAVMVSAKEEPDSDFPPAVDGLLRVHKRIVDGLEGDNAN-APNMGGKVS 183
           KILDGPPGT ERAVMVSAKEEPDS  PPA+DGLLRVHKRIVDGL+GD+++ A   G KVS
Sbjct: 201 KILDGPPGTTERAVMVSAKEEPDSSLPPAMDGLLRVHKRIVDGLDGDSSHIASGTGTKVS 260

Query: 184 TRLLVAASQAGSLIGKQGGTVKSIQEESNCIVRVLGSEDLPVFALQDDRVVEVLGDPAGV 243
           TRLLV ASQAGSLIGKQGGTVKSIQE S C+VRVLG+EDLPVFALQDDRVVEVLGDPAGV
Sbjct: 261 TRLLVPASQAGSLIGKQGGTVKSIQEASGCVVRVLGAEDLPVFALQDDRVVEVLGDPAGV 320

Query: 244 HKAVELIASHLRKFLVDRSIIPVFEMNMQMTNQQMEHMPPPHQSWGPPQGMPPNAGGGPG 303
           HKAVELIASHLRKFLVDRSIIP+FEM+MQM+N Q+EHMP PHQSWGPPQG+PP+AGGGPG
Sbjct: 321 HKAVELIASHLRKFLVDRSIIPLFEMHMQMSNPQVEHMP-PHQSWGPPQGLPPSAGGGPG 380

Query: 304 FGPNPPYMPPPRQFDNYYPPADMPSAMDKQPHHGISAYGREAPMGVHPQTNAQSVPSIVT 363
           FGP P YMPPPRQ +NYYPPAD+P  M+KQPH GISAYGR+APMGVH  +N+Q  PS++T
Sbjct: 381 FGPTPQYMPPPRQIENYYPPADLPPPMEKQPHQGISAYGRDAPMGVHASSNSQGAPSMIT 440

Query: 364 QTTQQMQIPLSFADAVIGTAGASISYIRRASGATVTIQETRGVPGEMT------------ 423
           Q TQQMQIPLS+ADAVIGTAGASISYIRRASGATVTIQETRGVPGEMT            
Sbjct: 441 QITQQMQIPLSYADAVIGTAGASISYIRRASGATVTIQETRGVPGEMTVEISGTASQVQT 500

Query: 424 ------NFMAGAGAPAQTQAGGSADQGYNSYAAHGSVYASPPAANPAHASHAGGYGSVYS 470
                 NFMA A APAQ Q GGS DQ YN YAAHGSVYASPP +N  H  H GGYGSVY 
Sbjct: 501 AQQLIQNFMAEAAAPAQAQTGGSTDQAYNPYAAHGSVYASPP-SNQGHTGHTGGYGSVYG 558

[Close]
BLAST of CmoCh12G011540 vs. TrEMBL
Match: D7TXC7_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_14s0081g00440 PE=4 SV=1)

HSP 1 Score: 642.1 bits (1655), Expect = 5.2e-181
Identity = 338/443 (76.30%), Postives = 372/443 (83.97%), Query Frame = 1 

Query: 45  EEPENLHGLENENGPETLELEPKEVHNEDTLAVVGEKKWPGWPGESVFRMLVPAQKVGSI 104
           E  EN    + +  PE  + + K   ++D+    GEK+WPGWPGESVFRMLVPAQKVGSI
Sbjct: 72  EVEENFGEPDMDQLPEDSQPQQKRGRDDDSAIGGGEKRWPGWPGESVFRMLVPAQKVGSI 131

Query: 105 IGRKGEFIKKIVEETRARIKILDGPPGTAERAVMVSAKEEPDSDFPPAVDGLLRVHKRIV 164
           IGRKGEFIKKIVEETRARIKILDGPPGTAERAVMVSAKEEPDS  PPA+DGLL+VHKRIV
Sbjct: 132 IGRKGEFIKKIVEETRARIKILDGPPGTAERAVMVSAKEEPDSSLPPAMDGLLKVHKRIV 191

Query: 165 DGLEGDNANAPNMGGKVSTRLLVAASQAGSLIGKQGGTVKSIQEESNCIVRVLGSEDLPV 224
           DGLEGD+++ P  GGKVSTRLLVAASQAGSLIGKQGGTVKSIQE SNCIVRVLG+EDLP+
Sbjct: 192 DGLEGDSSHMPP-GGKVSTRLLVAASQAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPI 251

Query: 225 FALQDDRVVEVLGDPAGVHKAVELIASHLRKFLVDRSIIPVFEMNMQMTNQQMEHMPPPH 284
           FALQDDRVVEV+G+P GVHKAVELIASHLRKFLVDRS+IP+FEM MQM+N  +EHMPP H
Sbjct: 252 FALQDDRVVEVVGEPIGVHKAVELIASHLRKFLVDRSVIPLFEMQMQMSNPPIEHMPP-H 311

Query: 285 QSWGPPQGMPPNAGGGPGFGPNPPYMPPPRQFDNYYPPADMPSAMDKQPHHGISAYGREA 344
           Q WGPPQG+PPNA GGPGFGPNPPYMPPPRQ D+YYPP ++P  ++KQPH GISAYGRE 
Sbjct: 312 QPWGPPQGLPPNASGGPGFGPNPPYMPPPRQLDSYYPPPELPPPVEKQPHQGISAYGREV 371

Query: 345 PMGVHPQTNAQSVPSIVTQTTQQMQIPLSFADAVIGTAGASISYIRRASGATVTIQETRG 404
           PMG H  ++AQ  PS++TQ TQQMQIPLS+ADAVIGTAGASISYIRRASGATVTIQETRG
Sbjct: 372 PMGGHAPSSAQPAPSMITQVTQQMQIPLSYADAVIGTAGASISYIRRASGATVTIQETRG 431

Query: 405 VPGEMT------------------NFMAGAGAPAQTQAGGSADQGYNSYAAHGSVYASPP 464
           VPGEMT                  NFMA A APAQ QAGGSADQGYNSYAAHGS+YAS P
Sbjct: 432 VPGEMTVEINGTASQVQAAQQLIQNFMAEAAAPAQAQAGGSADQGYNSYAAHGSMYAS-P 491

Query: 465 AANPAHASHAGGYGSVYSTNYGY 470
           A+NPAHASH GGYG VY  NYGY
Sbjct: 492 ASNPAHASHTGGYGPVYGANYGY 511

[Close]
BLAST of CmoCh12G011540 vs. TrEMBL
Match: A0A061F946_THECC (RNA-binding KH domain-containing protein OS=Theobroma cacao GN=TCM_026308 PE=4 SV=1)

HSP 1 Score: 641.3 bits (1653), Expect = 8.9e-181
Identity = 350/501 (69.86%), Postives = 392/501 (78.24%), Query Frame = 1 

Query: 1   MADVEQSYTHVDDNEVDETAQIYENAQIYENAQVQDN-------TLEQESTEEPE-NLH- 60
           MA+V+QS+   ++ +V E     EN  + +N  ++ N        LE     EP+ NL  
Sbjct: 1   MAEVDQSFVEHEEEQVQEPENSEENLNLEQNLSLEQNLNLEPNLNLEPNLNLEPDLNLEE 60

Query: 61  ----GLENENGPETLELEPKEVHNEDTLAVVGEKKWPGWPGESVFRMLVPAQKVGSIIGR 120
                LE +N  +    +PK+ H ++ +    EKKWPGWPGESVFRMLVPAQKVGSIIGR
Sbjct: 61  NAEENLEEQNLQQESPHQPKQEHEDEAVVGGVEKKWPGWPGESVFRMLVPAQKVGSIIGR 120

Query: 121 KGEFIKKIVEETRARIKILDGPPGTAERAVMVSAKEEPDSDFPPAVDGLLRVHKRIVDGL 180
           KGEFIKKIVEETRARIKILDGPPGT ERAVMVSAKEEPDS  PPA+DGLLRVHKRIVDGL
Sbjct: 121 KGEFIKKIVEETRARIKILDGPPGTTERAVMVSAKEEPDSSLPPAMDGLLRVHKRIVDGL 180

Query: 181 EGDNANAPN-MGGKVSTRLLVAASQAGSLIGKQGGTVKSIQEESNCIVRVLGSEDLPVFA 240
           +GD+++AP  +G KVSTRLLV ASQAGSLIGKQG TVKSIQE S C+VRVLG+EDLPVFA
Sbjct: 181 DGDSSHAPTAVGTKVSTRLLVPASQAGSLIGKQGTTVKSIQESSGCVVRVLGAEDLPVFA 240

Query: 241 LQDDRVVEVLGDPAGVHKAVELIASHLRKFLVDRSIIPVFEMNMQMTNQQMEHMPPPHQS 300
           LQDDRVVEV+G+ AGVHKAVELIASHLRKFLVDRSIIP+FEM+MQM+N QM+HMP PHQS
Sbjct: 241 LQDDRVVEVVGEAAGVHKAVELIASHLRKFLVDRSIIPLFEMHMQMSNPQMDHMP-PHQS 300

Query: 301 WGPPQGMPPNAGGGPGFGPNPPYMPPPRQFDNYYPPADMPSAMDKQPHHGISAYGREAPM 360
           WGPPQG+PPNA GG GFG NP YMPPPRQ DNYYPPADMP  ++KQPH GISAYGREAPM
Sbjct: 301 WGPPQGVPPNASGGAGFGHNPQYMPPPRQLDNYYPPADMPPPIEKQPHQGISAYGREAPM 360

Query: 361 GVHPQTNAQSVPSIVTQTTQQMQIPLSFADAVIGTAGASISYIRRASGATVTIQETRGVP 420
           G H  +N QS PS++TQ TQQMQIPLS+ADAVIGTAGASISYIRRASGATVTIQETRGVP
Sbjct: 361 GAHASSNPQSAPSMITQVTQQMQIPLSYADAVIGTAGASISYIRRASGATVTIQETRGVP 420

Query: 421 GEMT------------------NFMAGAGAPAQTQAGGSADQGYNSYAAHGSVYASPPAA 470
           GEMT                  NFMA A APAQ Q GG+ DQ YN YAAH SVYASPP +
Sbjct: 421 GEMTVEISGTASQVQTAQQLIQNFMAEAAAPAQGQTGGATDQAYNPYAAHSSVYASPP-S 480

[Close]
BLAST of CmoCh12G011540 vs. TAIR10
Match: AT3G04610.1 (AT3G04610.1 RNA-binding KH domain-containing protein)

HSP 1 Score: 520.4 bits (1339), Expect = 1.2e-147
Identity = 300/472 (63.56%), Postives = 341/472 (72.25%), Query Frame = 1 

Query: 21  QIYENAQIYENAQVQDNTLEQESTEEPENLHGLENENG-PETLELEPKEVHNEDTLAVVG 80
           + ++ AQ      VQD+  ++   +       +E+E G PE LE   K    ED      
Sbjct: 124 EAHDQAQYQAQGDVQDHNGDEVQDK-------VEDEEGIPEHLESLQKSEPEEDATVGGE 183

Query: 81  EKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTAERAVMV 140
           EK+WPGWPGE+VFRMLVPAQKVGSIIGRKG+ IKKIVEETRARIKILDGPPGT ERAVMV
Sbjct: 184 EKRWPGWPGETVFRMLVPAQKVGSIIGRKGDVIKKIVEETRARIKILDGPPGTTERAVMV 243

Query: 141 SAKEEPDSDFPPAVDGLLRVHKRIVDGLEGDNANAPNMGGKVSTRLLVAASQAGSLIGKQ 200
           S KEEP+S  PP++DGLLRVH RIVDGL+G+ + AP    KVSTRLLV ASQAGSLIGKQ
Sbjct: 244 SGKEEPESSLPPSMDGLLRVHMRIVDGLDGEASQAPPPS-KVSTRLLVPASQAGSLIGKQ 303

Query: 201 GGTVKSIQEESNCIVRVLGSEDLPVFALQDDRVVEVLGDPAGVHKAVELIASHLRKFLVD 260
           GGTVK+IQE S CIVRVLGSEDLPVFALQDDRVVEV+G+P  VH+A+ELIASHLRKFLVD
Sbjct: 304 GGTVKAIQEASACIVRVLGSEDLPVFALQDDRVVEVVGEPTSVHRALELIASHLRKFLVD 363

Query: 261 RSIIPVFEMNMQMTNQQMEHMPPPHQSWGPPQGMPPNAGGGPGFGPN-PPYMPPPRQFDN 320
           RSIIP FE  MQ   +QM+HMPPPHQSWGPPQG  P+ GGG G+G N PPYM PP + D+
Sbjct: 364 RSIIPFFENQMQKPTRQMDHMPPPHQSWGPPQGHAPSVGGG-GYGHNPPPYMQPPPRHDS 423

Query: 321 YYPPADM-PSAMDKQPHHGISAYGREAPMGVHPQTNAQSVPSIVTQTTQQMQIPLSFADA 380
           YYPP +M    M+KQPH GISAYGRE PM VH    + + P +  Q TQQMQIPLS+ADA
Sbjct: 424 YYPPPEMRQPPMEKQPHQGISAYGREPPMNVHV---SSAPPMVAQQVTQQMQIPLSYADA 483

Query: 381 VIGTAGASISYIRRASGATVTIQETRGVPGEMT------------------NFM--AGAG 440
           VIGT+G++ISY RR SGATVTIQETRGVPGEMT                  NFM  AGA 
Sbjct: 484 VIGTSGSNISYTRRLSGATVTIQETRGVPGEMTVEVSGTGSQVQTAVQLIQNFMAEAGAP 543

Query: 441 APAQTQAGGSADQGYNSYAAHGSVYASPPAANPAHASHAGGYGSVYSTNYGY 470
           APAQ Q      QGYN YA HGSVYA+ P   P      GGY + YS+ YGY
Sbjct: 544 APAQPQTVAPEQQGYNPYATHGSVYAAAPTNPP------GGYATDYSSGYGY 577

[Close]
BLAST of CmoCh12G011540 vs. TAIR10
Match: AT4G26000.1 (AT4G26000.1 RNA-binding KH domain-containing protein)

HSP 1 Score: 236.9 bits (603), Expect = 2.6e-62
Identity = 145/349 (41.55%), Postives = 211/349 (60.46%), Query Frame = 1 

Query: 80  EKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTAERAVMV 139
           E++WPGWPG+ VFRM+VP  KVG+IIGRKG+FIKK+ EETRARIK+LDGP  T +R V++
Sbjct: 64  EERWPGWPGDCVFRMIVPVTKVGAIIGRKGDFIKKMCEETRARIKVLDGPVNTPDRIVLI 123

Query: 140 SAKEEPDSDFPPAVDGLLRVHKRIVDGLEGDNANAPNMGGKVST-RLLVAASQAGSLIGK 199
           S KEEP++   PA+D +LRV +R+    + D+ +  N G   S+ RLLVA++QA +LIGK
Sbjct: 124 SGKEEPEAYMSPAMDAVLRVFRRVSGLPDNDDDDVQNAGSVFSSVRLLVASTQAINLIGK 183

Query: 200 QGGTVKSIQEESNCIVRVLGSEDLPVFALQDDRVVEVLGDPAGVHKAVELIASHLRKFLV 259
           QG  +KSI E S   VR+L  E+ P +A QD+R+V++ G+   + KA+E I  HLR+FLV
Sbjct: 184 QGSLIKSIVENSGASVRILSEEETPFYAAQDERIVDLQGEALKILKALEAIVGHLRRFLV 243

Query: 260 DRSIIPVFEMNMQMTNQQMEHMPPPHQSWGPPQGMPPNAGGGPGFG----PNPPYMPPPR 319
           D +++P+FE        Q     P  +S      +  N    P F       P ++    
Sbjct: 244 DHTVVPLFEKQYLARVSQTRQEEPLAESKSSLHTISSNL-MEPDFSLLARREPLFLERDS 303

Query: 320 QFDNYYPPADMPSAMDKQPHHGISAYGREAPMGV-HPQTNAQSVPSIVTQTTQQMQIPLS 379
           + D+   P+            G+S Y ++  +   H    A+   + VTQ +Q MQIP S
Sbjct: 304 RVDSRVQPS------------GVSIYSQDPVLSARHSPGLARVSSAFVTQVSQTMQIPFS 363

Query: 380 FADAVIGTAGASISYIRRASGATVTIQETRGVPGEMTNFMAGAGAPAQT 423
           +A+ +IG  GA+I+YIRR SGAT+TI+E+   P ++T  + G  +  QT
Sbjct: 364 YAEDIIGVEGANIAYIRRRSGATITIKESPH-PDQITVEIKGTTSQVQT 398

[Close]
BLAST of CmoCh12G011540 vs. TAIR10
Match: AT5G15270.2 (AT5G15270.2 RNA-binding KH domain-containing protein)

HSP 1 Score: 106.7 bits (265), Expect = 4.0e-23
Identity = 55/174 (31.61%), Postives = 104/174 (59.77%), Query Frame = 1 

Query: 89  ESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTAERAVMVSAKEEPDSD 148
           ++VFR L P +K+GS+IGR G+ +K++  +TR++I+I +  PG  ER + + +  +  + 
Sbjct: 49  DTVFRYLCPVKKIGSVIGRGGDIVKQLRNDTRSKIRIGEAIPGCDERVITIYSPSDETNA 108

Query: 149 F-------PPAVDGLLRVHKRIVDGLEGDNANAPNMGGKVSTRLLVAASQAGSLIGKQGG 208
           F        PA D L R+H R+V   +  + ++P    +V+ +LLV + Q G ++G+ G 
Sbjct: 109 FGDGEKVLSPAQDALFRIHDRVVAD-DARSEDSPEGEKQVTAKLLVPSDQIGCILGRGGQ 168

Query: 209 TVKSIQEESNCIVRVLGSEDLPVFALQDDRVVEVLGDPAGVHKAVELIASHLRK 256
            V++I+ E+   +R++   ++P+ AL  D ++++ G+   V KA+  IAS L +
Sbjct: 169 IVQNIRSETGAQIRIVKDRNMPLCALNSDELIQISGEVLIVKKALLQIASRLHE 221

[Close]
BLAST of CmoCh12G011540 vs. TAIR10
Match: AT1G51580.1 (AT1G51580.1 RNA-binding KH domain-containing protein)

HSP 1 Score: 99.0 bits (245), Expect = 8.3e-21
Identity = 99/361 (27.42%), Postives = 154/361 (42.66%), Query Frame = 1 

Query: 78  VGEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTAERAV 137
           VG    P    E  FR+L PA KVGS+IG+ G  ++ +  E+ A IK+ D    + ER +
Sbjct: 264 VGPFNRPVVEEEVAFRLLCPADKVGSLIGKGGAVVRALQNESGASIKVSDPTHDSEERII 323

Query: 138 MVSAKEEPDSDFPPAVDGLLRVHKRIVD-GLEGDNANAPNMGGKVSTRLLVAASQAGSLI 197
           ++SA+E  +     A DG++RVH RIV+ G E   A        V  RLLV +   G L+
Sbjct: 324 VISARENLERRHSLAQDGVMRVHNRIVEIGFEPSAA--------VVARLLVHSPYIGRLL 383

Query: 198 GKQGGTVKSIQEESNCIVRVLGSEDLPVFALQDDRVVEVLGDPAGVHKAVELIASHLRKF 257
           GK G  +  ++  +   +RV   +    +  Q D +V+V+G+   V  A+  I   LR+ 
Sbjct: 384 GKGGHLISEMRRATGASIRVFAKDQATKYESQHDEIVQVIGNLKTVQDALFQILCRLREA 443

Query: 258 LVDRSIIPVFEMNMQMTNQQMEHMPPPHQSWGPPQGMPPNAGGGPGFGPNPPYMPP--PR 317
           +    +                    P Q  G P   PP     P  GP P   PP  PR
Sbjct: 444 MFPGRL--------------------PFQGMGGP---PP-----PFMGPYPEPPPPFGPR 503

Query: 318 QF----DNYYPPAD----------------------MPSAMDKQPHHGISAY-GREAPMG 377
           Q+    D Y+ P                         PS M   P  GI  + G   P  
Sbjct: 504 QYPASPDRYHSPVGPFHERHCHGPGFDRPPGPGFDRPPSPMSWTPQPGIDGHPGGMVPPD 563

Query: 378 VHPQTNAQSVP-----SIVTQTTQQMQIPLSFADAVIGTAGASISYIRRASGATVTIQET 404
           V+     ++ P      ++T    ++ IP ++   V G   ++++YI++ SGA V + + 
Sbjct: 564 VNHGFALRNEPIGSENPVMTSANVEIVIPQAYLGHVYGENCSNLNYIKQVSGANVVVHDP 588

[Close]
BLAST of CmoCh12G011540 vs. TAIR10
Match: AT1G14170.3 (AT1G14170.3 RNA-binding KH domain-containing protein)

HSP 1 Score: 96.3 bits (238), Expect = 5.4e-20
Identity = 65/204 (31.86%), Postives = 112/204 (54.90%), Query Frame = 1 

Query: 67  KEVHNEDTLAVVGEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKIL 126
           + +H+E    V+  +       ++V+R L P +K GSIIG+ GE  K+I  ET++ ++I 
Sbjct: 28  RNLHDETDQNVIASE-------DTVYRYLCPVKKTGSIIGKGGEIAKQIRSETKSNMRIN 87

Query: 127 DGPPGTAERAVMVSAKEEPDSDFP-------PAVDGLLRVHKRIV------DGLEGDNAN 186
           +  PG  ER V + +  E  + F        PA+D L +VH  +V      DG + DN  
Sbjct: 88  EALPGCEERVVTMYSTNEELNHFGDDGELVCPALDALFKVHDMVVADADQDDGTDDDN-- 147

Query: 187 APNMGGK--VSTRLLVAASQAGSLIGKQGGTVKSIQEESNCIVRVLGSEDLPVFA--LQD 246
             ++G K  V+ R+LV + Q G +IGK G  +++++ ++N  +RV+  + LP  A  L  
Sbjct: 148 --DLGEKQTVTVRMLVPSDQIGCVIGKGGQVIQNLRNDTNAQIRVI-KDHLPACALTLSH 207

Query: 247 DRVVEVLGDPAGVHKAVELIASHL 254
           D ++ ++G+P  V +A+  +AS L
Sbjct: 208 DELLLIIGEPLVVREALYQVASLL 219

[Close]
BLAST of CmoCh12G011540 vs. NCBI nr
Match: gi|659070698|ref|XP_008456230.1| (PREDICTED: poly(rC)-binding protein 3 isoform X1 [Cucumis melo])

HSP 1 Score: 771.9 bits (1992), Expect = 6.3e-220
Identity = 421/492 (85.57%), Postives = 437/492 (88.82%), Query Frame = 1 

Query: 1   MADVEQSYTHV-DDNEVDETAQIYENAQIYENAQVQDNTLEQESTEEPENLHGLENENGP 60
           MADVEQ+YTHV DD++VD      ENAQIYENAQV D TLEQE+T+E ENLH L+NE+ P
Sbjct: 1   MADVEQNYTHVVDDDQVD------ENAQIYENAQVHDITLEQENTQEVENLHELQNEHIP 60

Query: 61  ETLELEPKEVHNEDTLAVVGEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEET 120
           ETLE EPK+VHNED L VV EKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEET
Sbjct: 61  ETLESEPKQVHNEDPLTVVSEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEET 120

Query: 121 RARIKILDGPPGTAERAVMVSAKEEPDSDFPPAVDGLLRVHKRIVDGLEGDNANAPNMGG 180
           RARIKILDGPPGTAERAVMVSAK+EPDS FPPAVDGLLRVHKRIVDGLEGDNA+APN G 
Sbjct: 121 RARIKILDGPPGTAERAVMVSAKDEPDSAFPPAVDGLLRVHKRIVDGLEGDNAHAPNAGS 180

Query: 181 KVSTRLLVAASQAGSLIGKQGGTVKSIQEESNCIVRVLGSEDLPVFALQDDRVVEVLGDP 240
           KVSTRLLVAASQAGSLIGKQGGTVKSIQEESNCIVRVLGSEDLPVFALQDDRVVEVLGDP
Sbjct: 181 KVSTRLLVAASQAGSLIGKQGGTVKSIQEESNCIVRVLGSEDLPVFALQDDRVVEVLGDP 240

Query: 241 AGVHKAVELIASHLRKFLVDRSIIPVFEMNMQMTNQQM-EHM-PPPHQSWGPPQGMPPNA 300
           AGVHKAVELIASHLRKFLVDRSIIPVFEMNMQM+N QM +HM PPPHQ WGPPQGMPPNA
Sbjct: 241 AGVHKAVELIASHLRKFLVDRSIIPVFEMNMQMSNPQMDQHMPPPPHQPWGPPQGMPPNA 300

Query: 301 GGGPGFGPNPP-YM-PPPRQFDNYYPPADMPSAMDKQPHHGISAYGREAPMGVHPQTNAQ 360
           GGGPGFGPNPP YM PPPRQFDNYYPPA+M + MDKQPHHGISAYGREAPMGVH  +NAQ
Sbjct: 301 GGGPGFGPNPPQYMPPPPRQFDNYYPPAEMQAVMDKQPHHGISAYGREAPMGVHAASNAQ 360

Query: 361 SVPSIVTQTTQQMQIPLSFADAVIGTAGASISYIRRASGATVTIQETRGVPGEMT----- 420
           S PSIVTQTTQQMQIPLSFADAVIGTAGASISYIRRASGATVTIQETRGVPGEMT     
Sbjct: 361 SAPSIVTQTTQQMQIPLSFADAVIGTAGASISYIRRASGATVTIQETRGVPGEMTVEMSG 420

Query: 421 -------------NFMAGAGAPAQTQAGGSADQGYNSYAAHGSVYASPPAANPAHASHAG 470
                        NFMAGAGAPAQ QAG S DQGYNSYAAHGSVYASPP ANP  A+HAG
Sbjct: 421 TASQVQAAQQLIQNFMAGAGAPAQPQAGVSTDQGYNSYAAHGSVYASPP-ANP--AAHAG 480

[Close]
BLAST of CmoCh12G011540 vs. NCBI nr
Match: gi|659070700|ref|XP_008456234.1| (PREDICTED: poly(rC)-binding protein 3 isoform X2 [Cucumis melo])

HSP 1 Score: 765.4 bits (1975), Expect = 5.9e-218
Identity = 420/492 (85.37%), Postives = 436/492 (88.62%), Query Frame = 1 

Query: 1   MADVEQSYTHV-DDNEVDETAQIYENAQIYENAQVQDNTLEQESTEEPENLHGLENENGP 60
           MADVEQ+YTHV DD++VD      ENAQIYENAQV D TLEQE+T+E ENLH L+NE+ P
Sbjct: 1   MADVEQNYTHVVDDDQVD------ENAQIYENAQVHDITLEQENTQEVENLHELQNEHIP 60

Query: 61  ETLELEPKEVHNEDTLAVVGEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEET 120
           ETLE EPK+VHNED L VV EKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEET
Sbjct: 61  ETLESEPKQVHNEDPLTVVSEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEET 120

Query: 121 RARIKILDGPPGTAERAVMVSAKEEPDSDFPPAVDGLLRVHKRIVDGLEGDNANAPNMGG 180
           RARIKILDGPPGTAERAVMVSAK+EPDS FPPAVDGLLRVHKRIVDGLEGDNA+APN G 
Sbjct: 121 RARIKILDGPPGTAERAVMVSAKDEPDSAFPPAVDGLLRVHKRIVDGLEGDNAHAPNAGS 180

Query: 181 KVSTRLLVAASQAGSLIGKQGGTVKSIQEESNCIVRVLGSEDLPVFALQDDRVVEVLGDP 240
           KVSTRLLVAASQAGSLIGKQGGTVKSIQEESNCIVRVLGS DLPVFALQDDRVVEVLGDP
Sbjct: 181 KVSTRLLVAASQAGSLIGKQGGTVKSIQEESNCIVRVLGS-DLPVFALQDDRVVEVLGDP 240

Query: 241 AGVHKAVELIASHLRKFLVDRSIIPVFEMNMQMTNQQM-EHM-PPPHQSWGPPQGMPPNA 300
           AGVHKAVELIASHLRKFLVDRSIIPVFEMNMQM+N QM +HM PPPHQ WGPPQGMPPNA
Sbjct: 241 AGVHKAVELIASHLRKFLVDRSIIPVFEMNMQMSNPQMDQHMPPPPHQPWGPPQGMPPNA 300

Query: 301 GGGPGFGPNPP-YM-PPPRQFDNYYPPADMPSAMDKQPHHGISAYGREAPMGVHPQTNAQ 360
           GGGPGFGPNPP YM PPPRQFDNYYPPA+M + MDKQPHHGISAYGREAPMGVH  +NAQ
Sbjct: 301 GGGPGFGPNPPQYMPPPPRQFDNYYPPAEMQAVMDKQPHHGISAYGREAPMGVHAASNAQ 360

Query: 361 SVPSIVTQTTQQMQIPLSFADAVIGTAGASISYIRRASGATVTIQETRGVPGEMT----- 420
           S PSIVTQTTQQMQIPLSFADAVIGTAGASISYIRRASGATVTIQETRGVPGEMT     
Sbjct: 361 SAPSIVTQTTQQMQIPLSFADAVIGTAGASISYIRRASGATVTIQETRGVPGEMTVEMSG 420

Query: 421 -------------NFMAGAGAPAQTQAGGSADQGYNSYAAHGSVYASPPAANPAHASHAG 470
                        NFMAGAGAPAQ QAG S DQGYNSYAAHGSVYASPP ANP  A+HAG
Sbjct: 421 TASQVQAAQQLIQNFMAGAGAPAQPQAGVSTDQGYNSYAAHGSVYASPP-ANP--AAHAG 480

[Close]
BLAST of CmoCh12G011540 vs. NCBI nr
Match: gi|449442959|ref|XP_004139248.1| (PREDICTED: flowering locus K homology domain isoform X1 [Cucumis sativus])

HSP 1 Score: 765.0 bits (1974), Expect = 7.7e-218
Identity = 418/492 (84.96%), Postives = 435/492 (88.41%), Query Frame = 1 

Query: 1   MADVEQSYTHV-DDNEVDETAQIYENAQIYENAQVQDNTLEQESTEEPENLHGLENENGP 60
           MADVEQ+YTHV DD++VD      ENAQIYENAQV D TLEQE+ +E ENLH L+NE+ P
Sbjct: 1   MADVEQNYTHVVDDDQVD------ENAQIYENAQVHDITLEQENAQEVENLHELQNEHIP 60

Query: 61  ETLELEPKEVHNEDTLAVVGEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEET 120
           ETLE EPK+VH ED L VV EKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEET
Sbjct: 61  ETLESEPKQVHIEDPLTVVSEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEET 120

Query: 121 RARIKILDGPPGTAERAVMVSAKEEPDSDFPPAVDGLLRVHKRIVDGLEGDNANAPNMGG 180
           RARIKILDGPPGTAERAVMVSAK+EPDS FPPAVDGLLRVHKRIVDGLEGDNA+APN G 
Sbjct: 121 RARIKILDGPPGTAERAVMVSAKDEPDSAFPPAVDGLLRVHKRIVDGLEGDNAHAPNAGS 180

Query: 181 KVSTRLLVAASQAGSLIGKQGGTVKSIQEESNCIVRVLGSEDLPVFALQDDRVVEVLGDP 240
           KVSTRLLVAASQAGSLIGKQGGTVKSIQEESNCIVRVLGSEDLPVFALQDDRVVEVLGDP
Sbjct: 181 KVSTRLLVAASQAGSLIGKQGGTVKSIQEESNCIVRVLGSEDLPVFALQDDRVVEVLGDP 240

Query: 241 AGVHKAVELIASHLRKFLVDRSIIPVFEMNMQMTNQQM-EHM-PPPHQSWGPPQGMPPNA 300
           AGVHKAVELIASHLRKFLVDRSIIPVFEMNMQM+N QM +HM PPPHQ WGPPQGMPPNA
Sbjct: 241 AGVHKAVELIASHLRKFLVDRSIIPVFEMNMQMSNPQMDQHMPPPPHQPWGPPQGMPPNA 300

Query: 301 GGGPGFGPNPP-YM-PPPRQFDNYYPPADMPSAMDKQPHHGISAYGREAPMGVHPQTNAQ 360
           GGGPGFGPNPP YM PPPRQFDNYYPPA+M + M+KQPHHGISAYGREAPMGVH  +NAQ
Sbjct: 301 GGGPGFGPNPPQYMPPPPRQFDNYYPPAEMQAVMEKQPHHGISAYGREAPMGVHAASNAQ 360

Query: 361 SVPSIVTQTTQQMQIPLSFADAVIGTAGASISYIRRASGATVTIQETRGVPGEMT----- 420
           S PSIVTQTTQQMQIPLSFADAVIGTAGASISYIRRASGATVTIQETRGVPGEMT     
Sbjct: 361 SAPSIVTQTTQQMQIPLSFADAVIGTAGASISYIRRASGATVTIQETRGVPGEMTVEMSG 420

Query: 421 -------------NFMAGAGAPAQTQAGGSADQGYNSYAAHGSVYASPPAANPAHASHAG 470
                        NFMAGAGAPAQ QAG S DQGYNSYAAHGSVYASPP ANP  A+HAG
Sbjct: 421 TASQVQAAQQLIQNFMAGAGAPAQPQAGVSTDQGYNSYAAHGSVYASPP-ANP--AAHAG 480

[Close]
BLAST of CmoCh12G011540 vs. NCBI nr
Match: gi|700205668|gb|KGN60787.1| (hypothetical protein Csa_2G010230 [Cucumis sativus])

HSP 1 Score: 765.0 bits (1974), Expect = 7.7e-218
Identity = 418/492 (84.96%), Postives = 435/492 (88.41%), Query Frame = 1 

Query: 1   MADVEQSYTHV-DDNEVDETAQIYENAQIYENAQVQDNTLEQESTEEPENLHGLENENGP 60
           MADVEQ+YTHV DD++VD      ENAQIYENAQV D TLEQE+ +E ENLH L+NE+ P
Sbjct: 27  MADVEQNYTHVVDDDQVD------ENAQIYENAQVHDITLEQENAQEVENLHELQNEHIP 86

Query: 61  ETLELEPKEVHNEDTLAVVGEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEET 120
           ETLE EPK+VH ED L VV EKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEET
Sbjct: 87  ETLESEPKQVHIEDPLTVVSEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEET 146

Query: 121 RARIKILDGPPGTAERAVMVSAKEEPDSDFPPAVDGLLRVHKRIVDGLEGDNANAPNMGG 180
           RARIKILDGPPGTAERAVMVSAK+EPDS FPPAVDGLLRVHKRIVDGLEGDNA+APN G 
Sbjct: 147 RARIKILDGPPGTAERAVMVSAKDEPDSAFPPAVDGLLRVHKRIVDGLEGDNAHAPNAGS 206

Query: 181 KVSTRLLVAASQAGSLIGKQGGTVKSIQEESNCIVRVLGSEDLPVFALQDDRVVEVLGDP 240
           KVSTRLLVAASQAGSLIGKQGGTVKSIQEESNCIVRVLGSEDLPVFALQDDRVVEVLGDP
Sbjct: 207 KVSTRLLVAASQAGSLIGKQGGTVKSIQEESNCIVRVLGSEDLPVFALQDDRVVEVLGDP 266

Query: 241 AGVHKAVELIASHLRKFLVDRSIIPVFEMNMQMTNQQM-EHM-PPPHQSWGPPQGMPPNA 300
           AGVHKAVELIASHLRKFLVDRSIIPVFEMNMQM+N QM +HM PPPHQ WGPPQGMPPNA
Sbjct: 267 AGVHKAVELIASHLRKFLVDRSIIPVFEMNMQMSNPQMDQHMPPPPHQPWGPPQGMPPNA 326

Query: 301 GGGPGFGPNPP-YM-PPPRQFDNYYPPADMPSAMDKQPHHGISAYGREAPMGVHPQTNAQ 360
           GGGPGFGPNPP YM PPPRQFDNYYPPA+M + M+KQPHHGISAYGREAPMGVH  +NAQ
Sbjct: 327 GGGPGFGPNPPQYMPPPPRQFDNYYPPAEMQAVMEKQPHHGISAYGREAPMGVHAASNAQ 386

Query: 361 SVPSIVTQTTQQMQIPLSFADAVIGTAGASISYIRRASGATVTIQETRGVPGEMT----- 420
           S PSIVTQTTQQMQIPLSFADAVIGTAGASISYIRRASGATVTIQETRGVPGEMT     
Sbjct: 387 SAPSIVTQTTQQMQIPLSFADAVIGTAGASISYIRRASGATVTIQETRGVPGEMTVEMSG 446

Query: 421 -------------NFMAGAGAPAQTQAGGSADQGYNSYAAHGSVYASPPAANPAHASHAG 470
                        NFMAGAGAPAQ QAG S DQGYNSYAAHGSVYASPP ANP  A+HAG
Sbjct: 447 TASQVQAAQQLIQNFMAGAGAPAQPQAGVSTDQGYNSYAAHGSVYASPP-ANP--AAHAG 506

[Close]
BLAST of CmoCh12G011540 vs. NCBI nr
Match: gi|778666444|ref|XP_011648742.1| (PREDICTED: flowering locus K homology domain isoform X2 [Cucumis sativus])

HSP 1 Score: 758.4 bits (1957), Expect = 7.2e-216
Identity = 417/492 (84.76%), Postives = 434/492 (88.21%), Query Frame = 1 

Query: 1   MADVEQSYTHV-DDNEVDETAQIYENAQIYENAQVQDNTLEQESTEEPENLHGLENENGP 60
           MADVEQ+YTHV DD++VD      ENAQIYENAQV D TLEQE+ +E ENLH L+NE+ P
Sbjct: 1   MADVEQNYTHVVDDDQVD------ENAQIYENAQVHDITLEQENAQEVENLHELQNEHIP 60

Query: 61  ETLELEPKEVHNEDTLAVVGEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEET 120
           ETLE EPK+VH ED L VV EKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEET
Sbjct: 61  ETLESEPKQVHIEDPLTVVSEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEET 120

Query: 121 RARIKILDGPPGTAERAVMVSAKEEPDSDFPPAVDGLLRVHKRIVDGLEGDNANAPNMGG 180
           RARIKILDGPPGTAERAVMVSAK+EPDS FPPAVDGLLRVHKRIVDGLEGDNA+APN G 
Sbjct: 121 RARIKILDGPPGTAERAVMVSAKDEPDSAFPPAVDGLLRVHKRIVDGLEGDNAHAPNAGS 180

Query: 181 KVSTRLLVAASQAGSLIGKQGGTVKSIQEESNCIVRVLGSEDLPVFALQDDRVVEVLGDP 240
           KVSTRLLVAASQAGSLIGKQGGTVKSIQEESNCIVRVLGS DLPVFALQDDRVVEVLGDP
Sbjct: 181 KVSTRLLVAASQAGSLIGKQGGTVKSIQEESNCIVRVLGS-DLPVFALQDDRVVEVLGDP 240

Query: 241 AGVHKAVELIASHLRKFLVDRSIIPVFEMNMQMTNQQM-EHM-PPPHQSWGPPQGMPPNA 300
           AGVHKAVELIASHLRKFLVDRSIIPVFEMNMQM+N QM +HM PPPHQ WGPPQGMPPNA
Sbjct: 241 AGVHKAVELIASHLRKFLVDRSIIPVFEMNMQMSNPQMDQHMPPPPHQPWGPPQGMPPNA 300

Query: 301 GGGPGFGPNPP-YM-PPPRQFDNYYPPADMPSAMDKQPHHGISAYGREAPMGVHPQTNAQ 360
           GGGPGFGPNPP YM PPPRQFDNYYPPA+M + M+KQPHHGISAYGREAPMGVH  +NAQ
Sbjct: 301 GGGPGFGPNPPQYMPPPPRQFDNYYPPAEMQAVMEKQPHHGISAYGREAPMGVHAASNAQ 360

Query: 361 SVPSIVTQTTQQMQIPLSFADAVIGTAGASISYIRRASGATVTIQETRGVPGEMT----- 420
           S PSIVTQTTQQMQIPLSFADAVIGTAGASISYIRRASGATVTIQETRGVPGEMT     
Sbjct: 361 SAPSIVTQTTQQMQIPLSFADAVIGTAGASISYIRRASGATVTIQETRGVPGEMTVEMSG 420

Query: 421 -------------NFMAGAGAPAQTQAGGSADQGYNSYAAHGSVYASPPAANPAHASHAG 470
                        NFMAGAGAPAQ QAG S DQGYNSYAAHGSVYASPP ANP  A+HAG
Sbjct: 421 TASQVQAAQQLIQNFMAGAGAPAQPQAGVSTDQGYNSYAAHGSVYASPP-ANP--AAHAG 480

The following BLAST results are available for this feature:
BLAST of CmoCh12G011540 vs. Swiss-Prot
Match NameE-valueIdentityDescription
FLK_ARATH2.1e-14663.56Flowering locus K homology domain OS=Arabidopsis thaliana GN=FLK PE=1 SV=1[more]
PEP_ARATH4.5e-6141.55RNA-binding KH domain-containing protein PEPPER OS=Arabidopsis thaliana GN=PEP P... [more]
HEN4_ARATH2.7e-1330.17KH domain-containing protein HEN4 OS=Arabidopsis thaliana GN=HEN4 PE=1 SV=1[more]
Y4837_ARATH6.0e-1327.43KH domain-containing protein At4g18375 OS=Arabidopsis thaliana GN=At4g18375 PE=2... [more]
NOVA2_HUMAN1.0e-1232.58RNA-binding protein Nova-2 OS=Homo sapiens GN=NOVA2 PE=1 SV=1[more]
BLAST of CmoCh12G011540 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LJ91_CUCSA5.3e-21884.96Uncharacterized protein OS=Cucumis sativus GN=Csa_2G010230 PE=4 SV=1[more]
M5VXP2_PRUPE8.6e-18474.06Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa003484mg PE=4 SV=1[more]
A0A067JUM6_JATCU3.3e-18371.96Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23518 PE=4 SV=1[more]
D7TXC7_VITVI5.2e-18176.30Putative uncharacterized protein OS=Vitis vinifera GN=VIT_14s0081g00440 PE=4 SV=... [more]
A0A061F946_THECC8.9e-18169.86RNA-binding KH domain-containing protein OS=Theobroma cacao GN=TCM_026308 PE=4 S... [more]
BLAST of CmoCh12G011540 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G04610.11.2e-14763.56 RNA-binding KH domain-containing protein[more]
AT4G26000.12.6e-6241.55 RNA-binding KH domain-containing protein[more]
AT5G15270.24.0e-2331.61 RNA-binding KH domain-containing protein[more]
AT1G51580.18.3e-2127.42 RNA-binding KH domain-containing protein[more]
AT1G14170.35.4e-2031.86 RNA-binding KH domain-containing protein[more]
BLAST of CmoCh12G011540 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659070698|ref|XP_008456230.1|6.3e-22085.57PREDICTED: poly(rC)-binding protein 3 isoform X1 [Cucumis melo][more]
gi|659070700|ref|XP_008456234.1|5.9e-21885.37PREDICTED: poly(rC)-binding protein 3 isoform X2 [Cucumis melo][more]
gi|449442959|ref|XP_004139248.1|7.7e-21884.96PREDICTED: flowering locus K homology domain isoform X1 [Cucumis sativus][more]
gi|700205668|gb|KGN60787.1|7.7e-21884.96hypothetical protein Csa_2G010230 [Cucumis sativus][more]
gi|778666444|ref|XP_011648742.1|7.2e-21684.76PREDICTED: flowering locus K homology domain isoform X2 [Cucumis sativus][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR004087KH_dom
IPR004088KH_dom_type_1
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO:0003723RNA binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009911 positive regulation of flower development
biological_process GO:0008150 biological_process
cellular_component GO:0005737 cytoplasm
cellular_component GO:0005634 nucleus
cellular_component GO:0005575 cellular_component
molecular_function GO:0003723 RNA binding
molecular_function GO:0003676 nucleic acid binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh12G011540.1CmoCh12G011540.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004087K Homology domainSMARTSM00322kh_6coord: 88..168
score: 2.5E-8coord: 179..254
score: 5.8E-14coord: 362..432
score:
IPR004088K Homology domain, type 1GENE3DG3DSA:3.30.1370.10coord: 179..255
score: 4.9E-18coord: 80..143
score: 1.5E-18coord: 363..414
score: 3.
IPR004088K Homology domain, type 1PFAMPF00013KH_1coord: 183..250
score: 8.6E-14coord: 92..142
score: 4.6E-11coord: 365..400
score: 3.
IPR004088K Homology domain, type 1PROFILEPS50084KH_TYPE_1coord: 180..249
score: 15.64coord: 89..156
score: 13.9coord: 363..423
score: 10
IPR004088K Homology domain, type 1unknownSSF54791Eukaryotic type KH-domain (KH-domain type I)coord: 175..265
score: 5.84E-16coord: 355..407
score: 1.05E-7coord: 83..143
score: 5.78
NoneNo IPR availablePANTHERPTHR10288KH DOMAIN CONTAINING RNA BINDING PROTEINcoord: 1..469
score: 1.2E
NoneNo IPR availablePANTHERPTHR10288:SF155SUBFAMILY NOT NAMEDcoord: 1..469
score: 1.2E