CmaCh12G011340 (gene) Cucurbita maxima (Rimu)

NameCmaCh12G011340
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionRNA-binding KH domain-containing protein
LocationCma_Chr12 : 8931079 .. 8937070 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TCTCTACCATTGTGGCCGCACGCCTCCTCTCTCTCTCTCCATCTCTCTCTCTCTTCCTCGCCAAATCTCTAAAACCCTAGAAGGCCACATTCGAGGTTCCAGATTTTCCAGTTCGAATTACTCCGTTCTCTCATACTTTTTGTACCTCGCTTCGATTCTTCAGTAGGTATGATAAAATAGGCTTATTTGCGTTGTTAATTTGATGTCTAGGGTTTGTTTGTTCGCGTGCTTTGTTATCTGTTCTGTTCGTCTATGAAGTTTTTATTTTTCCGTTAATATTTGTGATGGAAGTTGCGGAATGTTTTTAGTTTGTTTGGATTGGTTTTGTTTCAGATGGGTATGATTCATTTTGTTGGGAATAAGCCAGGAGATTTCGTGTTTCTTGGATTTTTATCGTTGACTTGGAATTTTCTAATTTTTGTATGTTCTACTGGTGGGATTTCCCTTGTCTTGTCAATTGTCAAGTTCACAGTAGATTTTTTGTTTTTCAATTCTGGATTATGATACTATCGTTCTGTCCAGAAAGGAAAAGTATATATATATATATATATATAAGCTGGAAATTTCCATATTCGAACACTTGAGGAGTGCATGTTTTATTGCTAATTTCACTTGTTAATATGAGTTGATGGCCTGAGGATTTTCAGGGTAGTTTTATATTTGTTTACTGAAATTTTATAGGTTATGCACTTTGGTGCGAATGAGGGAAATTTTTCTATATTAATTGTTTTACTTATATATGGTACTTTGTTGCAGCTTAATCTGTAAGTAACACATGGCTGACGTGGAACAGAGCTACACGCATGTCGACGATAATGAAGTTGATGAGACTGCACAAATATATGAGAACGCACAAATATATGAGAATGCTCAGGTACAGGACAATACACTAGAACAGGAGAGTACAGAGGAGCCAGAAAACTTGCACGGACTTGAGAATGAACATGTACCAGAAACCTTAGAGTTGGAGCCAAAAGAGGTGCATAATGAGGATACTCTGGCTGTTGTTGGTGAGAAGAAGTGGCCTGGATGGCCAGGAGAGAGTGTTTTTCGAATGTTGGTTCCTGCTCAAAAGGTTGGTAGTATAATTGGTCGCAAAGGTGAGTTCATCAAGAAAATAGTCGAGGAAACGAGAGCTCGGATTAAAATTCTTGATGGTCCTCCTGGAACAGCGGAAAGAGCAGTAAGTTTTCCTTCCTCCAGATAAGAACTTTTCTTTAATAATTTAGCTAGTATTTTTGTGAAAATTATTTGGATTTAAGGAGGTGCAAATGATTTAATATCAAATTAATAGTATCTATCCAGTTTTTTATTTTTTATTTTTTATTATGCATATATAATTTTTTTTTTTATTCTAATGGATATTGATGATTCATTAACAATTATTGTTTTAGGTTTTCTTAATTTTGTATTCTCAATATGTATAGCACCTTGCTTCAAGGTAGGCAAATATTGGGCATTATATTGCCTAATTAGCCCAATCTGGTCGAGCATCAAGTTTGGGCGATTATTTTTAGTTAGTTGTTTAATCTTGATTGTACTCCTGTTATATTCAAGCATGTGACATCAGTTATATGGCTGTGTAATGATGGAAATATGACGCTAAAAAGAAAATTTAGACCTTAAAGAGTTCATAAAATATTATCAATAATAACTTGATTAGAACTTGTACTAAAAGCCATTAAATCGTTGATTATAAAAATTAAAGTTAATATTCGAAAATTCTTTCGTGTCATGGAACAAACATTTGATTATAGGAAACCATTTGACACACTTAAAATGGATATGCTAAGACTTATGGAGAAGATTGAACTCCATCTTTCAAGATATCTGTGCTTCTACACCCCATCAATGACTACTAAACTGATTCTCTTACAGCTCTATAACTGCCATAAGGAAGTGTCCAGAAACTAAGATTAACCCTTTAAACTCATAAAAGCAAAGTCATAACTAAAACAGAAAGGAATGTAAGAGTATTCCAGGTAATCCCGAATATGGATACAGTTGCCTTGATTGTAGTAACAAAAAATGAATCTGTGCAGGTTGTGTGCAAAATTTAAGGCAACTACTCAATCTTCAATAGGATCCCATATTTGAAGAACCAAAGATCCAGATGCGGAGATCAGCATTCAACATTACAAAGTTCTGAAAAGTTGATCTGAATAAAGGCATCTGGAACTTTTGTACCATGAAGCACTGCAATATCTCTGGTAACTTCAGATCTGAAGGTTGATGTCAAGATTTCCAACGGGATAATAATATGAAAAATGGAGAAAACATAATGATAAATGTTAAGAGTTAAAAATTTTAGTAATTTAAAAGATGTTTATACACGATTAAAGATCTGCTTAAAATATAAATTGAGGCACTAAAACTGGCCAATCAATATCAAATAGAAGTGATGTATTTTTGCTTATGCTTCTATTGTGTCTTTGCCAATAACTGGGTCTATAATCCAACAACATAGAAGGTAATGTGAAAACCTGAACTCATTAATTTAAGGAGGAAAACATAACTATATTATCTAGTTTCTTGAAACATAGAAAGCTGGTAAATTTCAGCATTTTCCCTTAGATATATTTGCGGCCTCTTAAGTTGTCTCTGGCATGATATATAGGAAGAAATCATCCACCATTTTGGCCGTTGCCTTTTCAGATATATAGTTTGGGAGAAACTATTTTTGAATTGTTTGGTCTGCCTTTTAGTTTTGGCAACTTTATTATTCTAATTGGAAGGTGCTCCAAATTCGATGAAGAAGTTAAGCACGTTTGATGACTAAGGGTTTGGACACCTAATGGGAGATCTAAATGGAAATTAATATGAATAGTTTTTTTGTTTTTTTATGGTTCTCACTTGCAGATAAACTTAGTTTTTCGTTGTAGACCACACAAATTGGGAGGTGCTCTTTTTGTTATTTCCATTTTTTTCTACTATTGGATGCACAACACGATCCATCAATGCATATATCATTGGATACAACTGGATGTTTGTGCGAGTAAATTGATATGCTAGTGTATTTATTAGTGAATTTGTATCATTATAAGTTTTGGATGGTGATCCTTGGTTATTTTCTTATAGATATTATGAACTAATCCTATCTTTTCATTGGTTGGGCTTTTTTTTTTTTTTGTGTTTTCCCTGTGGTGAGCTCATTAGCTGGCTCTGGAATTCGACAAATTGTTTTTGCTTTTTATTTGCTATATGAGTCATTCTTTCTTTGTAGAATGGGGAATTTCAGGTTCCAGTACTTCATAATACTCATTTGATTTTTTTTGTTGTTGTGATAATTGGTCAATTTATGATGAAAATTTGTAGTTCTCACAAGATGGTATGCTTCATTTAATAGGTAATGGTGTCTGCGAAGGAGGAACCCGATTCTGATTTTCCTCCTGCGGTGGATGGACTTCTGAGGGTTCATAAACGTATTGTTGATGGTCTGGAGGGTGATAATGCTAATGCTCCTAACATGGGAGGCAAAGTCTCAACGAGACTGCTAGTTGCAGCTTCACAAGCAGGAAGTTTAATCGGGAAGCAGGGAGGGACCGTTAAATCCATTCAAGAAGAGTCAAATTGTATAGTTAGAGTTCTTGGATCAGGTGGACTTCTCTGGATGTCATTTGATTCTCTGCTTTATCGTTCTTTTACTATGTTATTCATTGGTTTCTGAGTTGATAATTATATACTCCATTTTGGTTTTCCATTTTCATTGCATTCTTATACTTGTCACCCGGGAACTTTCTGCAGAAGATTTGCCTGTTTTTGCTCTCCAAGACGATAGAGTTGTTGAAGTACTAGGCGATCCAGCTGGTGTGCACAAAGCCGTGGAACTCATTGCTTCTCATCTGAGAAAGTTTCTGGTTGACCGAAGCATTATCCCAGTTTTTGAAATGAATGTGAGTATGATTTCCTAATGATTTTTCGAACACTTCTACTTTTAATAGTATTGAAGTCCTAAACATTCCTGTTCTTCCTTCCAACCCAAATGCCCAAAAATCAGATGCAGATGACAAATCAACAGATGGAGCACATGCCACCACCACACCAATCTTGGGGCCCACCTCAAGGAATGCCACCAAATGCTGGGGGTGGTCCTGGCTTCGGACCGAATCCTCCATACATGCCACCACCTCGTCAATTTGACAATTATTATCCACCTGCTGATATGCCATCGGCTATGGATAAGCAACCTCATCATGGAATTTCTGCTTATGGTAGGGAAGCTCCTATGGGTGTTCATCCGCAAACAAATGCACAGTCAGTGCCTTCAATTGTCACACAGGTTTGATAAGCCTTCGAACTCCTGTATTTGATGTGGCTTTGCAAACTCGTCGAAGTTTTTCAAAAGTAATTCTGATGTGGTGCTTGTGTTACATCCTTCTTTCTAACTCTATCCCATTTTTTTTTATTGCTAAGACAAGAAACAAGTTAACTGCATGCCATCATCTGAGTCATTGGGTTATAAGTGTTCGCTCATTAAACACTTATCATTTGGCCCGATCCCATGGTTCCTTAGATTTTCATTTTTCCCCCATAGTTGGGATAACTCTTGAGGACTTGGTGAATATTTTATGATAATTCAGAATTTTTTTTTTTGTTGGTACTTGCAGACAACCCAACAAATGCAGATTCCATTATCTTTTGCTGACGCTGTCATTGGAACTGCTGGCGCTAGTATAAGCTACATTCGTCGTGCTAGTGGGGCTACCGTTACTATCCAAGAAACGAGGGGAGTCCCTGGGGAAATGACGGTAGAAATGAGTGGAACTGCTTCTCAAGTTCAAGCAGCCCAGCAGCTTATACAGGCAATTCTTTTTTCTGGCTTGTTTTGATCTTGCATCTTCTTGATGAAAACATTAGATATAATGTATCTTCTTGATGATTTTGCATCGTTCACTTTATTTTTGGAGATAAATCGCATTGTCACGTTTTATTAAACATACTCATTAGACCTCATCAATATGAATTTGAAGGCCACTTTCTCTGCTCTTTCCTGCAATCTATTAACATTCTTATTTAATTGTGTTGCAGAATTTTATGGCCGGTGCTGGAGCTCCAGCGCAGGCTCAAGCTGGGGGTTCGGCAGACCAAGGGTACAACTCTTACACTCAAGGTTCAGTCTATGCATCACCCCCTGCCGCAAACCCAGGTCATGCAAGTCATGCTGGAGGCTATGGCTCTGTCTACAGTACGAATTATGGGTACTAAGCCTTTGTACGTTGTAAAATTCTCCCCAACTTGGCGTGGTTGCGGCGAAATGGCATTGGTCACTCAAAACCTCCATCATTAGTAAGCTTTGCATCATGTAGCCTCCTTTTAAATAGATTCTACCTGAAAACTTTTTGAACCATTCTGCATTAGTAGCCTATTTGTATGATTTAGCGAAATCTGTCTCTCTGAAATTTTAGCACCAAGTTTTTTTTTTTTACTTATAAGATGTGATGAACGGACATTTTAAGAGGAGCTGCTACACTGTCGCACCCTAAAAATTGGAGGAGAATGAGATTATAGTATCTATTAGATCCTTTTTAAAATGCAGGTGTTGAATGGCTGCTGTGATTGGAGCTAACTAATGAGATTAGAGTATCTACCCCAAGGCAAGCCTCTCTCCTTTGCCTTCTCTTCTTAGTGTTCTTTTTTTTTTTTAATCTTTTTGTTTTGTTTTGTTTTGTTTTTTTGTTTCTGTTTCTGTTTCATAACACTTCTCGACTTATTTCAAGGCTGCTACCAAATAACATTTTCCCCCCCTTCAAAATGATGATAAAATAAAGTCGTGATAATGATTCATGAAGTGTTGAGCGATCGTCGATTGACTTAGTGGTCGTAGTTGTAAAGTCGTGATATTTGTACTTTACGATAAGACGTCGATACTTTATGATGAGAAGTCGATATGAAGAAATACATACAATACACATTCTTCTTGTATTCTTGACTTGTGCATGCCCATGTTGATCCCTTTATAACAGCTCATGTTGACCCCTTTTTCATTGCTCCA

mRNA sequence

TCTCTACCATTGTGGCCGCACGCCTCCTCTCTCTCTCTCCATCTCTCTCTCTCTTCCTCGCCAAATCTCTAAAACCCTAGAAGGCCACATTCGAGGTTCCAGATTTTCCAGTTCGAATTACTCCGTTCTCTCATACTTTTTGTACCTCGCTTCGATTCTTCAGTAGCTTAATCTGTAAGTAACACATGGCTGACGTGGAACAGAGCTACACGCATGTCGACGATAATGAAGTTGATGAGACTGCACAAATATATGAGAACGCACAAATATATGAGAATGCTCAGGTACAGGACAATACACTAGAACAGGAGAGTACAGAGGAGCCAGAAAACTTGCACGGACTTGAGAATGAACATGTACCAGAAACCTTAGAGTTGGAGCCAAAAGAGGTGCATAATGAGGATACTCTGGCTGTTGTTGGTGAGAAGAAGTGGCCTGGATGGCCAGGAGAGAGTGTTTTTCGAATGTTGGTTCCTGCTCAAAAGGTTGGTAGTATAATTGGTCGCAAAGGTGAGTTCATCAAGAAAATAGTCGAGGAAACGAGAGCTCGGATTAAAATTCTTGATGGTCCTCCTGGAACAGCGGAAAGAGCAGTAATGGTGTCTGCGAAGGAGGAACCCGATTCTGATTTTCCTCCTGCGGTGGATGGACTTCTGAGGGTTCATAAACGTATTGTTGATGGTCTGGAGGGTGATAATGCTAATGCTCCTAACATGGGAGGCAAAGTCTCAACGAGACTGCTAGTTGCAGCTTCACAAGCAGGAAGTTTAATCGGGAAGCAGGGAGGGACCGTTAAATCCATTCAAGAAGAGTCAAATTGTATAGTTAGAGTTCTTGGATCAGAAGATTTGCCTGTTTTTGCTCTCCAAGACGATAGAGTTGTTGAAGTACTAGGCGATCCAGCTGGTGTGCACAAAGCCGTGGAACTCATTGCTTCTCATCTGAGAAAGTTTCTGGTTGACCGAAGCATTATCCCAGTTTTTGAAATGAATATGACAAATCAACAGATGGAGCACATGCCACCACCACACCAATCTTGGGGCCCACCTCAAGGAATGCCACCAAATGCTGGGGGTGGTCCTGGCTTCGGACCGAATCCTCCATACATGCCACCACCTCGTCAATTTGACAATTATTATCCACCTGCTGATATGCCATCGGCTATGGATAAGCAACCTCATCATGGAATTTCTGCTTATGGTAGGGAAGCTCCTATGGGTGTTCATCCGCAAACAAATGCACAGTCAGTGCCTTCAATTGTCACACAGACAACCCAACAAATGCAGATTCCATTATCTTTTGCTGACGCTGTCATTGGAACTGCTGGCGCTAGTATAAGCTACATTCGTCGTGCTAGTGGGGCTACCGTTACTATCCAAGAAACGAGGGGAGTCCCTGGGGAAATGACGGTAGAAATGAGTGGAACTGCTTCTCAAAATTTTATGGCCGGTGCTGGAGCTCCAGCGCAGGCTCAAGCTGGGGGTTCGGCAGACCAAGGGTACAACTCTTACACTCAAGGTTCAGTCTATGCATCACCCCCTGCCGCAAACCCAGGTCATGCAAGTCATGCTGGAGGCTATGGCTCTGTCTACAGTACGAATTATGGGTACTAAGCCTTTGTACGTTGTAAAATTCTCCCCAACTTGGCGTGGTTGCGGCGAAATGGCATTGGTCACTCAAAACCTCCATCATTAGTGTTGAATGGCTGCTGTGATTGGAGCTAACTAATGAGATTAGAGTATCTACCCCAAGGCAAGCCTCTCTCCTTTGCCTTCTCTTCTTAGTGTTCTTTTTTTTTTTTAATCTTTTTGTTTTGTTTTGTTTTGTTTTTTTGTTTCTGTTTCTGTTTCATAACACTTCTCGACTTATTTCAAGGCTGCTACCAAATAACATTTTCCCCCCCTTCAAAATGATGATAAAATAAAGTCGTGATAATGATTCATGAAGTGTTGAGCGATCGTCGATTGACTTAGTGGTCGTAGTTGTAAAGTCGTGATATTTGTACTTTACGATAAGACGTCGATACTTTATGATGAGAAGTCGATATGAAGAAATACATACAATACACATTCTTCTTGTATTCTTGACTTGTGCATGCCCATGTTGATCCCTTTATAACAGCTCATGTTGACCCCTTTTTCATTGCTCCA

Coding sequence (CDS)

ATGGCTGACGTGGAACAGAGCTACACGCATGTCGACGATAATGAAGTTGATGAGACTGCACAAATATATGAGAACGCACAAATATATGAGAATGCTCAGGTACAGGACAATACACTAGAACAGGAGAGTACAGAGGAGCCAGAAAACTTGCACGGACTTGAGAATGAACATGTACCAGAAACCTTAGAGTTGGAGCCAAAAGAGGTGCATAATGAGGATACTCTGGCTGTTGTTGGTGAGAAGAAGTGGCCTGGATGGCCAGGAGAGAGTGTTTTTCGAATGTTGGTTCCTGCTCAAAAGGTTGGTAGTATAATTGGTCGCAAAGGTGAGTTCATCAAGAAAATAGTCGAGGAAACGAGAGCTCGGATTAAAATTCTTGATGGTCCTCCTGGAACAGCGGAAAGAGCAGTAATGGTGTCTGCGAAGGAGGAACCCGATTCTGATTTTCCTCCTGCGGTGGATGGACTTCTGAGGGTTCATAAACGTATTGTTGATGGTCTGGAGGGTGATAATGCTAATGCTCCTAACATGGGAGGCAAAGTCTCAACGAGACTGCTAGTTGCAGCTTCACAAGCAGGAAGTTTAATCGGGAAGCAGGGAGGGACCGTTAAATCCATTCAAGAAGAGTCAAATTGTATAGTTAGAGTTCTTGGATCAGAAGATTTGCCTGTTTTTGCTCTCCAAGACGATAGAGTTGTTGAAGTACTAGGCGATCCAGCTGGTGTGCACAAAGCCGTGGAACTCATTGCTTCTCATCTGAGAAAGTTTCTGGTTGACCGAAGCATTATCCCAGTTTTTGAAATGAATATGACAAATCAACAGATGGAGCACATGCCACCACCACACCAATCTTGGGGCCCACCTCAAGGAATGCCACCAAATGCTGGGGGTGGTCCTGGCTTCGGACCGAATCCTCCATACATGCCACCACCTCGTCAATTTGACAATTATTATCCACCTGCTGATATGCCATCGGCTATGGATAAGCAACCTCATCATGGAATTTCTGCTTATGGTAGGGAAGCTCCTATGGGTGTTCATCCGCAAACAAATGCACAGTCAGTGCCTTCAATTGTCACACAGACAACCCAACAAATGCAGATTCCATTATCTTTTGCTGACGCTGTCATTGGAACTGCTGGCGCTAGTATAAGCTACATTCGTCGTGCTAGTGGGGCTACCGTTACTATCCAAGAAACGAGGGGAGTCCCTGGGGAAATGACGGTAGAAATGAGTGGAACTGCTTCTCAAAATTTTATGGCCGGTGCTGGAGCTCCAGCGCAGGCTCAAGCTGGGGGTTCGGCAGACCAAGGGTACAACTCTTACACTCAAGGTTCAGTCTATGCATCACCCCCTGCCGCAAACCCAGGTCATGCAAGTCATGCTGGAGGCTATGGCTCTGTCTACAGTACGAATTATGGGTACTAA

Protein sequence

MADVEQSYTHVDDNEVDETAQIYENAQIYENAQVQDNTLEQESTEEPENLHGLENEHVPETLELEPKEVHNEDTLAVVGEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTAERAVMVSAKEEPDSDFPPAVDGLLRVHKRIVDGLEGDNANAPNMGGKVSTRLLVAASQAGSLIGKQGGTVKSIQEESNCIVRVLGSEDLPVFALQDDRVVEVLGDPAGVHKAVELIASHLRKFLVDRSIIPVFEMNMTNQQMEHMPPPHQSWGPPQGMPPNAGGGPGFGPNPPYMPPPRQFDNYYPPADMPSAMDKQPHHGISAYGREAPMGVHPQTNAQSVPSIVTQTTQQMQIPLSFADAVIGTAGASISYIRRASGATVTIQETRGVPGEMTVEMSGTASQNFMAGAGAPAQAQAGGSADQGYNSYTQGSVYASPPAANPGHASHAGGYGSVYSTNYGY
BLAST of CmaCh12G011340 vs. Swiss-Prot
Match: FLK_ARATH (Flowering locus K homology domain OS=Arabidopsis thaliana GN=FLK PE=1 SV=1)

HSP 1 Score: 522.3 bits (1344), Expect = 5.5e-147
Identity = 305/474 (64.35%), Postives = 346/474 (73.00%), Query Frame = 1

Query: 18  ETAQIYENAQIYENAQVQDNTLEQESTEEPENLHGLENEHVPETLELEPKEVHNEDTLAV 77
           E  Q+ + A      Q Q +  +    E  + +   + E +PE LE   K    ED    
Sbjct: 117 EQFQLQDEAHDQAQYQAQGDVQDHNGDEVQDKVE--DEEGIPEHLESLQKSEPEEDATVG 176

Query: 78  VGEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTAERAV 137
             EK+WPGWPGE+VFRMLVPAQKVGSIIGRKG+ IKKIVEETRARIKILDGPPGT ERAV
Sbjct: 177 GEEKRWPGWPGETVFRMLVPAQKVGSIIGRKGDVIKKIVEETRARIKILDGPPGTTERAV 236

Query: 138 MVSAKEEPDSDFPPAVDGLLRVHKRIVDGLEGDNANAPNMGGKVSTRLLVAASQAGSLIG 197
           MVS KEEP+S  PP++DGLLRVH RIVDGL+G+ + AP    KVSTRLLV ASQAGSLIG
Sbjct: 237 MVSGKEEPESSLPPSMDGLLRVHMRIVDGLDGEASQAPPPS-KVSTRLLVPASQAGSLIG 296

Query: 198 KQGGTVKSIQEESNCIVRVLGSEDLPVFALQDDRVVEVLGDPAGVHKAVELIASHLRKFL 257
           KQGGTVK+IQE S CIVRVLGSEDLPVFALQDDRVVEV+G+P  VH+A+ELIASHLRKFL
Sbjct: 297 KQGGTVKAIQEASACIVRVLGSEDLPVFALQDDRVVEVVGEPTSVHRALELIASHLRKFL 356

Query: 258 VDRSIIPVFE--MNMTNQQMEHMPPPHQSWGPPQGMPPNAGGGPGFGPN-PPYMPPPRQF 317
           VDRSIIP FE  M    +QM+HMPPPHQSWGPPQG  P+ GGG G+G N PPYM PP + 
Sbjct: 357 VDRSIIPFFENQMQKPTRQMDHMPPPHQSWGPPQGHAPSVGGG-GYGHNPPPYMQPPPRH 416

Query: 318 DNYYPPADM-PSAMDKQPHHGISAYGREAPMGVHPQTNAQSVPSIVTQTTQQMQIPLSFA 377
           D+YYPP +M    M+KQPH GISAYGRE PM VH    + + P +  Q TQQMQIPLS+A
Sbjct: 417 DSYYPPPEMRQPPMEKQPHQGISAYGREPPMNVHV---SSAPPMVAQQVTQQMQIPLSYA 476

Query: 378 DAVIGTAGASISYIRRASGATVTIQETRGVPGEMTVEMSGTAS---------QNFMAGAG 437
           DAVIGT+G++ISY RR SGATVTIQETRGVPGEMTVE+SGT S         QNFMA AG
Sbjct: 477 DAVIGTSGSNISYTRRLSGATVTIQETRGVPGEMTVEVSGTGSQVQTAVQLIQNFMAEAG 536

Query: 438 APAQAQAGGSA--DQGYNSY-TQGSVYASPPAANPGHASHAGGYGSVYSTNYGY 476
           APA AQ    A   QGYN Y T GSVYA+ P   P      GGY + YS+ YGY
Sbjct: 537 APAPAQPQTVAPEQQGYNPYATHGSVYAAAPTNPP------GGYATDYSSGYGY 577

BLAST of CmaCh12G011340 vs. Swiss-Prot
Match: PEP_ARATH (RNA-binding KH domain-containing protein PEPPER OS=Arabidopsis thaliana GN=PEP PE=1 SV=1)

HSP 1 Score: 240.0 bits (611), Expect = 5.4e-62
Identity = 158/390 (40.51%), Postives = 225/390 (57.69%), Query Frame = 1

Query: 80  EKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTAERAVMV 139
           E++WPGWPG+ VFRM+VP  KVG+IIGRKG+FIKK+ EETRARIK+LDGP  T +R V++
Sbjct: 64  EERWPGWPGDCVFRMIVPVTKVGAIIGRKGDFIKKMCEETRARIKVLDGPVNTPDRIVLI 123

Query: 140 SAKEEPDSDFPPAVDGLLRVHKRIVDGLEGDNANAPNMGGKVST-RLLVAASQAGSLIGK 199
           S KEEP++   PA+D +LRV +R+    + D+ +  N G   S+ RLLVA++QA +LIGK
Sbjct: 124 SGKEEPEAYMSPAMDAVLRVFRRVSGLPDNDDDDVQNAGSVFSSVRLLVASTQAINLIGK 183

Query: 200 QGGTVKSIQEESNCIVRVLGSEDLPVFALQDDRVVEVLGDPAGVHKAVELIASHLRKFLV 259
           QG  +KSI E S   VR+L  E+ P +A QD+R+V++ G+   + KA+E I  HLR+FLV
Sbjct: 184 QGSLIKSIVENSGASVRILSEEETPFYAAQDERIVDLQGEALKILKALEAIVGHLRRFLV 243

Query: 260 DRSIIPVFEMNMTNQ--QMEHMPPPHQSWGPPQGMPPNAGGGPGFG----PNPPYMPPPR 319
           D +++P+FE     +  Q     P  +S      +  N    P F       P ++    
Sbjct: 244 DHTVVPLFEKQYLARVSQTRQEEPLAESKSSLHTISSNL-MEPDFSLLARREPLFLERDS 303

Query: 320 QFDNYYPPADMPSAMDKQPHHGISAYGREAPMGV-HPQTNAQSVPSIVTQTTQQMQIPLS 379
           + D+   P+            G+S Y ++  +   H    A+   + VTQ +Q MQIP S
Sbjct: 304 RVDSRVQPS------------GVSIYSQDPVLSARHSPGLARVSSAFVTQVSQTMQIPFS 363

Query: 380 FADAVIGTAGASISYIRRASGATVTIQETRGVPGEMTVEMSGTAS---------QNFMAG 439
           +A+ +IG  GA+I+YIRR SGAT+TI+E+   P ++TVE+ GT S         Q F+  
Sbjct: 364 YAEDIIGVEGANIAYIRRRSGATITIKESPH-PDQITVEIKGTTSQVQTAEQLIQEFIIN 423

Query: 440 AGAPAQAQAGGSADQGYNSYTQGSVYASPP 453
              P       S   GY     G V A PP
Sbjct: 424 HKEPV------SVSGGYARIDSGYVPAYPP 433

BLAST of CmaCh12G011340 vs. Swiss-Prot
Match: HEN4_ARATH (KH domain-containing protein HEN4 OS=Arabidopsis thaliana GN=HEN4 PE=1 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 2.7e-13
Identity = 54/179 (30.17%), Postives = 92/179 (51.40%), Query Frame = 1

Query: 88  GESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTAERAVMVSAKEEPDS 147
           G + FR+L P   VG++IG+ G  IK++ + T A+I++ + P G+ +R + + A+ +  S
Sbjct: 45  GHAAFRLLCPLSHVGAVIGKSGNVIKQLQQSTGAKIRVEEPPSGSPDRVITIIAQADSKS 104

Query: 148 DFPPA------VDGLLRVHKRIVDGLEGDNANAPNMGGK------VSTRLLVAASQAGSL 207
                       +G  +  +  V   +G       +         V  RLL  +S AG++
Sbjct: 105 RVKLGANNNGNAEGEKKEEEVEVSKAQGALIKVFELLAAEADSDTVVCRLLTESSHAGAV 164

Query: 208 IGKQGGTVKSIQEESNCIVRVLGSEDLPVFALQDDRVVEVLGDPAGVHKAVELIASHLR 255
           IGK G  V SI++E+ C + +   E+LP+ A  DD +VEV G+   V KA+  I+  L+
Sbjct: 165 IGKGGQMVGSIRKETGCKISI-RIENLPICADTDDEMVEVEGNAIAVKKALVSISRCLQ 222

BLAST of CmaCh12G011340 vs. Swiss-Prot
Match: Y4837_ARATH (KH domain-containing protein At4g18375 OS=Arabidopsis thaliana GN=At4g18375 PE=2 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 2.7e-13
Identity = 96/349 (27.51%), Postives = 160/349 (45.85%), Query Frame = 1

Query: 91  VFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTAERAVMV--SAKEEPD-- 150
           V+R+L P   VG +IG+ G+ I  I   T+A+IK+ D   G ++R + +  S KE+ +  
Sbjct: 37  VYRILCPIDVVGGVIGKSGKVINAIRHNTKAKIKVFDQLHGCSQRVITIYCSVKEKQEEI 96

Query: 151 ----SDFPP---AVDGLLRVHKRIVDGLEGDNANA-PNMGGKVSTRLLVAASQAGSLIGK 210
               S+  P   A D LL+V+  IV   E +N     +       RLLV  SQ+ SLIGK
Sbjct: 97  GFTKSENEPLCCAQDALLKVYDAIVASDEENNTKTNVDRDDNKECRLLVPFSQSSSLIGK 156

Query: 211 QGGTVKSIQEESNCIVRVLG---SEDLPVFALQDDRVVEVLGDPAGVHKAVELIASHLRK 270
            G  +K I+  +   V+V+    S+   V A++ D VV + G+P  V +A+  +++ + K
Sbjct: 157 AGENIKRIRRRTRASVKVVSKDVSDPSHVCAMEYDNVVVISGEPESVKQALFAVSAIMYK 216

Query: 271 FLVDRSIIPVFEMNMTNQQMEHMPPPHQSWGPPQGMPPNAGGGPGFGPNPPYMPPPRQFD 330
            +  R  IP   ++ T+Q +     P  S   P  +  +     GF  N  ++       
Sbjct: 217 -INPRENIP---LDSTSQDV-----PAASVIVPSDLSNSVYPQTGFYSNQDHI------- 276

Query: 331 NYYPPADMPSAMDKQPHHGISAYGREA--PMGVH----PQTNAQSVPSIVTQTTQQMQIP 390
                A +PS  +         Y   A  P+ V     P T+     S   +   ++  P
Sbjct: 277 -LQQGAGVPSYFNALSVSDFQGYAETAANPVPVFASSLPVTHGFGGSSRSEELVFKVLCP 336

Query: 391 LSFADAVIGTAGASISYIRRASGATVTIQETRGVPGEMTVEMSGTASQN 419
           L     VIG  G++I  IR ASG+ + + ++R   G+    +  TA+++
Sbjct: 337 LCNIMRVIGKGGSTIKRIREASGSCIEVNDSRTKCGDDECVIIVTATES 368

BLAST of CmaCh12G011340 vs. Swiss-Prot
Match: PCBP1_BOVIN (Poly(rC)-binding protein 1 OS=Bos taurus GN=PCBP1 PE=2 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 3.0e-12
Identity = 96/343 (27.99%), Postives = 154/343 (44.90%), Query Frame = 1

Query: 93  RMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTAERAVMVSAKEEPDSDFPPA 152
           R+L+  ++VGSIIG+KGE +K+I EE+ ARI I +G     ER + ++            
Sbjct: 17  RLLMHGKEVGSIIGKKGESVKRIREESGARINISEG--NCPERIITLTG----------P 76

Query: 153 VDGLLRVHKRIVDGLEGD-NANAPNMGG----KVSTRLLVAASQAGSLIGKQGGTVKSIQ 212
            + + +    I+D LE D N++  N        V+ RL+V A+Q GSLIGK G  +K I+
Sbjct: 77  TNAIFKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIR 136

Query: 213 EESNCIVRVLGSEDLPVFALQDDRVVEVLGDPAGVHKAVELIASHLRKFLVDRSIIPVFE 272
           E +   V+V G     +     +R + + G P  V + V+ I   + + L       V  
Sbjct: 137 ESTGAQVQVAGD----MLPNSTERAITIAGVPQSVTECVKQICLVMLETLSQSPQGRV-- 196

Query: 273 MNMTNQQMEHMPPPHQSWGPPQGMPPNAGGGPGFG---PNPPYMPPPRQFDNYYPPADMP 332
           M +  Q M    P   + G  Q    +A G P        PP      Q  +   P D+ 
Sbjct: 197 MTIPYQPMPASSPVICAGG--QDRCSDAAGYPHATHDLEGPPLDAYSIQGQHTISPLDLA 256

Query: 333 --SAMDKQPHHGISAYGREAPMGV---HPQTNAQ-SVPSIVTQTTQQMQIPLSFADAVIG 392
             + + +Q  H    +G     G+    P+     +     TQTT ++ IP +    +IG
Sbjct: 257 KLNQVARQQSHFAMMHGGTGFAGIDSSSPEVKGYWASLDASTQTTHELTIPNNLIGCIIG 316

Query: 393 TAGASISYIRRASGATVTIQETRGVPGEMTVEMSGTASQNFMA 422
             GA+I+ IR+ SGA + I           V ++G+A+   +A
Sbjct: 317 RQGANINEIRQMSGAQIKIANPVEGSSGRQVTITGSAASISLA 339

BLAST of CmaCh12G011340 vs. TrEMBL
Match: A0A0A0LJ91_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G010230 PE=4 SV=1)

HSP 1 Score: 770.0 bits (1987), Expect = 1.7e-219
Identity = 423/492 (85.98%), Postives = 440/492 (89.43%), Query Frame = 1

Query: 1   MADVEQSYTHV-DDNEVDETAQIYENAQIYENAQVQDNTLEQESTEEPENLHGLENEHVP 60
           MADVEQ+YTHV DD++VDE      NAQIYENAQV D TLEQE+ +E ENLH L+NEH+P
Sbjct: 27  MADVEQNYTHVVDDDQVDE------NAQIYENAQVHDITLEQENAQEVENLHELQNEHIP 86

Query: 61  ETLELEPKEVHNEDTLAVVGEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEET 120
           ETLE EPK+VH ED L VV EKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEET
Sbjct: 87  ETLESEPKQVHIEDPLTVVSEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEET 146

Query: 121 RARIKILDGPPGTAERAVMVSAKEEPDSDFPPAVDGLLRVHKRIVDGLEGDNANAPNMGG 180
           RARIKILDGPPGTAERAVMVSAK+EPDS FPPAVDGLLRVHKRIVDGLEGDNA+APN G 
Sbjct: 147 RARIKILDGPPGTAERAVMVSAKDEPDSAFPPAVDGLLRVHKRIVDGLEGDNAHAPNAGS 206

Query: 181 KVSTRLLVAASQAGSLIGKQGGTVKSIQEESNCIVRVLGSEDLPVFALQDDRVVEVLGDP 240
           KVSTRLLVAASQAGSLIGKQGGTVKSIQEESNCIVRVLGSEDLPVFALQDDRVVEVLGDP
Sbjct: 207 KVSTRLLVAASQAGSLIGKQGGTVKSIQEESNCIVRVLGSEDLPVFALQDDRVVEVLGDP 266

Query: 241 AGVHKAVELIASHLRKFLVDRSIIPVFEMN--MTNQQM-EHM-PPPHQSWGPPQGMPPNA 300
           AGVHKAVELIASHLRKFLVDRSIIPVFEMN  M+N QM +HM PPPHQ WGPPQGMPPNA
Sbjct: 267 AGVHKAVELIASHLRKFLVDRSIIPVFEMNMQMSNPQMDQHMPPPPHQPWGPPQGMPPNA 326

Query: 301 GGGPGFGPNPP-YM-PPPRQFDNYYPPADMPSAMDKQPHHGISAYGREAPMGVHPQTNAQ 360
           GGGPGFGPNPP YM PPPRQFDNYYPPA+M + M+KQPHHGISAYGREAPMGVH  +NAQ
Sbjct: 327 GGGPGFGPNPPQYMPPPPRQFDNYYPPAEMQAVMEKQPHHGISAYGREAPMGVHAASNAQ 386

Query: 361 SVPSIVTQTTQQMQIPLSFADAVIGTAGASISYIRRASGATVTIQETRGVPGEMTVEMSG 420
           S PSIVTQTTQQMQIPLSFADAVIGTAGASISYIRRASGATVTIQETRGVPGEMTVEMSG
Sbjct: 387 SAPSIVTQTTQQMQIPLSFADAVIGTAGASISYIRRASGATVTIQETRGVPGEMTVEMSG 446

Query: 421 TAS---------QNFMAGAGAPAQAQAGGSADQGYNSY-TQGSVYASPPAANPGHASHAG 476
           TAS         QNFMAGAGAPAQ QAG S DQGYNSY   GSVYASPP ANP  A+HAG
Sbjct: 447 TASQVQAAQQLIQNFMAGAGAPAQPQAGVSTDQGYNSYAAHGSVYASPP-ANP--AAHAG 506

BLAST of CmaCh12G011340 vs. TrEMBL
Match: A0A067JUM6_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23518 PE=4 SV=1)

HSP 1 Score: 654.1 bits (1686), Expect = 1.3e-184
Identity = 355/485 (73.20%), Postives = 393/485 (81.03%), Query Frame = 1

Query: 4   VEQSYTHVDDNEVDETAQIYENAQIYENAQVQDNTLEQESTEEPENLHGLENEHVPETLE 63
           ++ +  H  +  +D T    +   I  N    D  L+Q      EN      + VPE  +
Sbjct: 81  IDHNLDHAVNQGLDHTTD--DGLSIDHNV---DQALDQNVDHTAENNMDHAEDQVPEDFQ 140

Query: 64  LEPKEVHNEDTLAVVGEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARI 123
           ++ K+ H+EDT+A  GEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARI
Sbjct: 141 VQEKQGHHEDTVAAGGEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARI 200

Query: 124 KILDGPPGTAERAVMVSAKEEPDSDFPPAVDGLLRVHKRIVDGLEGDNAN-APNMGGKVS 183
           KILDGPPGT ERAVMVSAKEEPDS  PPA+DGLLRVHKRIVDGL+GD+++ A   G KVS
Sbjct: 201 KILDGPPGTTERAVMVSAKEEPDSSLPPAMDGLLRVHKRIVDGLDGDSSHIASGTGTKVS 260

Query: 184 TRLLVAASQAGSLIGKQGGTVKSIQEESNCIVRVLGSEDLPVFALQDDRVVEVLGDPAGV 243
           TRLLV ASQAGSLIGKQGGTVKSIQE S C+VRVLG+EDLPVFALQDDRVVEVLGDPAGV
Sbjct: 261 TRLLVPASQAGSLIGKQGGTVKSIQEASGCVVRVLGAEDLPVFALQDDRVVEVLGDPAGV 320

Query: 244 HKAVELIASHLRKFLVDRSIIPVFEMNM--TNQQMEHMPPPHQSWGPPQGMPPNAGGGPG 303
           HKAVELIASHLRKFLVDRSIIP+FEM+M  +N Q+EHMP PHQSWGPPQG+PP+AGGGPG
Sbjct: 321 HKAVELIASHLRKFLVDRSIIPLFEMHMQMSNPQVEHMP-PHQSWGPPQGLPPSAGGGPG 380

Query: 304 FGPNPPYMPPPRQFDNYYPPADMPSAMDKQPHHGISAYGREAPMGVHPQTNAQSVPSIVT 363
           FGP P YMPPPRQ +NYYPPAD+P  M+KQPH GISAYGR+APMGVH  +N+Q  PS++T
Sbjct: 381 FGPTPQYMPPPRQIENYYPPADLPPPMEKQPHQGISAYGRDAPMGVHASSNSQGAPSMIT 440

Query: 364 QTTQQMQIPLSFADAVIGTAGASISYIRRASGATVTIQETRGVPGEMTVEMSGTAS---- 423
           Q TQQMQIPLS+ADAVIGTAGASISYIRRASGATVTIQETRGVPGEMTVE+SGTAS    
Sbjct: 441 QITQQMQIPLSYADAVIGTAGASISYIRRASGATVTIQETRGVPGEMTVEISGTASQVQT 500

Query: 424 -----QNFMAGAGAPAQAQAGGSADQGYNSY-TQGSVYASPPAANPGHASHAGGYGSVYS 476
                QNFMA A APAQAQ GGS DQ YN Y   GSVYASPP +N GH  H GGYGSVY 
Sbjct: 501 AQQLIQNFMAEAAAPAQAQTGGSTDQAYNPYAAHGSVYASPP-SNQGHTGHTGGYGSVYG 558

BLAST of CmaCh12G011340 vs. TrEMBL
Match: M5VXP2_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa003484mg PE=4 SV=1)

HSP 1 Score: 647.9 bits (1670), Expect = 9.6e-183
Identity = 356/478 (74.48%), Postives = 388/478 (81.17%), Query Frame = 1

Query: 20  AQIYENAQIYENAQVQDNTLEQESTEEPENLHGLENEHVPETLELEPKEVH--------N 79
           AQ  E A     A  Q+  L Q    E E    L      E +E++ +E+H        +
Sbjct: 98  AQEQEQALAQLQAHEQEQALAQLQAHEQEQ--ALAQFQAQEEVEVQEEELHVREHNQEQH 157

Query: 80  EDTLAVVGEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPG 139
           ED +   GEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPG
Sbjct: 158 EDAVVGGGEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPG 217

Query: 140 TAERAVMVSAKEEPDSDFPPAVDGLLRVHKRIVDGLEGDNANAP-NMGGKVSTRLLVAAS 199
           T ERAVMVSAKEEPDS FPPA+DGLLRVHKRI+DGL+GD+++AP  MGGKVSTRLLVAAS
Sbjct: 218 TTERAVMVSAKEEPDSSFPPAMDGLLRVHKRIIDGLDGDSSHAPPGMGGKVSTRLLVAAS 277

Query: 200 QAGSLIGKQGGTVKSIQEESNCIVRVLGSEDLPVFALQDDRVVEVLGDPAGVHKAVELIA 259
           QAGSLIGKQGGTVKSIQE SNCIVRVLG+EDLP+FALQDDRVVEV+GD  GVHKA+ELIA
Sbjct: 278 QAGSLIGKQGGTVKSIQESSNCIVRVLGAEDLPIFALQDDRVVEVVGDAVGVHKAIELIA 337

Query: 260 SHLRKFLVDRSIIPVFEMNM--TNQQMEHMPPPHQSWGPPQGMPPNAGGGPGFGP-NPPY 319
           SHLRKFLVDRSIIP+FEM+M   N QMEH PP HQ WGPPQG+P NAGGGPGFGP NP Y
Sbjct: 338 SHLRKFLVDRSIIPIFEMHMQMANPQMEHAPP-HQQWGPPQGLPHNAGGGPGFGPPNPQY 397

Query: 320 MPPPRQFDNYYPPADMPSAMDKQPHHGISAYGREAPMGVHPQTNAQSVPSIVTQTTQQMQ 379
           MPPPRQ DNYYPPADMP  ++KQPHHGISAYGREAPMGVH  +NAQS PS+VTQ TQQMQ
Sbjct: 398 MPPPRQHDNYYPPADMPPPIEKQPHHGISAYGREAPMGVHQSSNAQSAPSMVTQITQQMQ 457

Query: 380 IPLSFADAVIGTAGASISYIRRASGATVTIQETRGVPGEMTVEMSGTAS---------QN 439
           IPLS+ADAVIGTAGASISYIRRASGATVTIQETRGVPGEMTVE+SG+AS         QN
Sbjct: 458 IPLSYADAVIGTAGASISYIRRASGATVTIQETRGVPGEMTVEISGSASQVQAAQQLIQN 517

Query: 440 FMAGAGAPAQAQAGGSADQGYNSY-TQGSVYASPPAANPGHASHAGGYGSVYSTNYGY 476
           FMA AGAP   Q  GS DQGYNSY   GSVY+SPP +N GHA H GGYGSVY ++YGY
Sbjct: 518 FMADAGAPQPTQTAGSVDQGYNSYAAHGSVYSSPP-SNQGHAGHTGGYGSVYGSHYGY 571

BLAST of CmaCh12G011340 vs. TrEMBL
Match: A0A0B0MUH2_GOSAR (Poly (RC)-binding 3 OS=Gossypium arboreum GN=F383_03998 PE=4 SV=1)

HSP 1 Score: 643.3 bits (1658), Expect = 2.4e-181
Identity = 354/499 (70.94%), Postives = 395/499 (79.16%), Query Frame = 1

Query: 1   MADVEQSYTHVDDNEVDETAQIYENAQIYENAQ-------------------VQDNTLEQ 60
           MA+V+QS+   ++ +V E   + +N  +  N                     V +  LEQ
Sbjct: 1   MAEVDQSFVEHEEEQVQEPQNLEQNPNLEHNLNLGNYVDLEPNVNLEHNISLVHNVNLEQ 60

Query: 61  ESTEEPENLHGLENEHVPETLELEPKEVHNEDTLAVVGEKKWPGWPGESVFRMLVPAQKV 120
              EE +    LE +++ +  E +PK  H ++ +   GEKKWPGWPGESVFRMLVPAQKV
Sbjct: 61  NLHEEEDQEEDLEEQNLQQESEHQPKVEHEDEAVVGGGEKKWPGWPGESVFRMLVPAQKV 120

Query: 121 GSIIGRKGEFIKKIVEETRARIKILDGPPGTAERAVMVSAKEEPDSDFPPAVDGLLRVHK 180
           GSIIGRKGEFIKKIVEETRARIKILDGPPGT ERAVMVSAKEEPDS  PPA+DGLLRVHK
Sbjct: 121 GSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMVSAKEEPDSSLPPAMDGLLRVHK 180

Query: 181 RIVDGLEGDNANAPNMGG-KVSTRLLVAASQAGSLIGKQGGTVKSIQEESNCIVRVLGSE 240
           RIVDGLEGD ++ P   G KVSTRLLV ASQAGSLIGKQG TVKSIQE SNCIVRVLG+E
Sbjct: 181 RIVDGLEGDPSHTPTAAGTKVSTRLLVPASQAGSLIGKQGATVKSIQESSNCIVRVLGAE 240

Query: 241 DLPVFALQDDRVVEVLGDPAGVHKAVELIASHLRKFLVDRSIIPVFEMNM--TNQQMEHM 300
           DLPVFALQDDRVVEV+G+ AGVHKAVELIA+HLRKFLVDRSIIP+FEM+M  +N QM+HM
Sbjct: 241 DLPVFALQDDRVVEVVGEAAGVHKAVELIATHLRKFLVDRSIIPLFEMHMQRSNHQMDHM 300

Query: 301 PPPHQSWGPPQGMPPNAGGGPGFGPNPPYMPPPRQFDNYYPPADMPSAMDKQPHHGISAY 360
           P PHQSWGPPQG+PPNA GG G+G NP YMPPPRQ DNYYPPADMP  M+KQPH GISAY
Sbjct: 301 P-PHQSWGPPQGVPPNASGGSGYGHNPQYMPPPRQMDNYYPPADMPPHMEKQPHQGISAY 360

Query: 361 GREAPMGVHPQTNAQSVPSIVTQTTQQMQIPLSFADAVIGTAGASISYIRRASGATVTIQ 420
           GRE PMG H  +N Q+ PS++TQ TQQMQIPLS+ADAVIGTAGASISYIRRASGATVTIQ
Sbjct: 361 GREVPMGAHGSSNPQNAPSMITQVTQQMQIPLSYADAVIGTAGASISYIRRASGATVTIQ 420

Query: 421 ETRGVPGEMTVEMSGTASQNFMA-GAGAPAQAQAGGSADQGYNSY-TQGSVYASPPAANP 476
           ETRGVPGEMTVE+SGTASQNFMA  A APAQAQAGG ADQ YN Y    SVYASPP +NP
Sbjct: 421 ETRGVPGEMTVEISGTASQNFMAEAAAAPAQAQAGGVADQAYNPYAAHSSVYASPP-SNP 480

BLAST of CmaCh12G011340 vs. TrEMBL
Match: A0A061F946_THECC (RNA-binding KH domain-containing protein OS=Theobroma cacao GN=TCM_026308 PE=4 SV=1)

HSP 1 Score: 642.5 bits (1656), Expect = 4.0e-181
Identity = 353/501 (70.46%), Postives = 398/501 (79.44%), Query Frame = 1

Query: 1   MADVEQSYTHVDDNEVDETAQIYENAQIYENAQVQDN-------TLEQESTEEPE-NLH- 60
           MA+V+QS+   ++ +V E     EN  + +N  ++ N        LE     EP+ NL  
Sbjct: 1   MAEVDQSFVEHEEEQVQEPENSEENLNLEQNLSLEQNLNLEPNLNLEPNLNLEPDLNLEE 60

Query: 61  ----GLENEHVPETLELEPKEVHNEDTLAVVGEKKWPGWPGESVFRMLVPAQKVGSIIGR 120
                LE +++ +    +PK+ H ++ +    EKKWPGWPGESVFRMLVPAQKVGSIIGR
Sbjct: 61  NAEENLEEQNLQQESPHQPKQEHEDEAVVGGVEKKWPGWPGESVFRMLVPAQKVGSIIGR 120

Query: 121 KGEFIKKIVEETRARIKILDGPPGTAERAVMVSAKEEPDSDFPPAVDGLLRVHKRIVDGL 180
           KGEFIKKIVEETRARIKILDGPPGT ERAVMVSAKEEPDS  PPA+DGLLRVHKRIVDGL
Sbjct: 121 KGEFIKKIVEETRARIKILDGPPGTTERAVMVSAKEEPDSSLPPAMDGLLRVHKRIVDGL 180

Query: 181 EGDNANAPN-MGGKVSTRLLVAASQAGSLIGKQGGTVKSIQEESNCIVRVLGSEDLPVFA 240
           +GD+++AP  +G KVSTRLLV ASQAGSLIGKQG TVKSIQE S C+VRVLG+EDLPVFA
Sbjct: 181 DGDSSHAPTAVGTKVSTRLLVPASQAGSLIGKQGTTVKSIQESSGCVVRVLGAEDLPVFA 240

Query: 241 LQDDRVVEVLGDPAGVHKAVELIASHLRKFLVDRSIIPVFEMNM--TNQQMEHMPPPHQS 300
           LQDDRVVEV+G+ AGVHKAVELIASHLRKFLVDRSIIP+FEM+M  +N QM+HMP PHQS
Sbjct: 241 LQDDRVVEVVGEAAGVHKAVELIASHLRKFLVDRSIIPLFEMHMQMSNPQMDHMP-PHQS 300

Query: 301 WGPPQGMPPNAGGGPGFGPNPPYMPPPRQFDNYYPPADMPSAMDKQPHHGISAYGREAPM 360
           WGPPQG+PPNA GG GFG NP YMPPPRQ DNYYPPADMP  ++KQPH GISAYGREAPM
Sbjct: 301 WGPPQGVPPNASGGAGFGHNPQYMPPPRQLDNYYPPADMPPPIEKQPHQGISAYGREAPM 360

Query: 361 GVHPQTNAQSVPSIVTQTTQQMQIPLSFADAVIGTAGASISYIRRASGATVTIQETRGVP 420
           G H  +N QS PS++TQ TQQMQIPLS+ADAVIGTAGASISYIRRASGATVTIQETRGVP
Sbjct: 361 GAHASSNPQSAPSMITQVTQQMQIPLSYADAVIGTAGASISYIRRASGATVTIQETRGVP 420

Query: 421 GEMTVEMSGTAS---------QNFMAGAGAPAQAQAGGSADQGYNSY-TQGSVYASPPAA 476
           GEMTVE+SGTAS         QNFMA A APAQ Q GG+ DQ YN Y    SVYASPP +
Sbjct: 421 GEMTVEISGTASQVQTAQQLIQNFMAEAAAPAQGQTGGATDQAYNPYAAHSSVYASPP-S 480

BLAST of CmaCh12G011340 vs. TAIR10
Match: AT3G04610.1 (AT3G04610.1 RNA-binding KH domain-containing protein)

HSP 1 Score: 522.3 bits (1344), Expect = 3.1e-148
Identity = 305/474 (64.35%), Postives = 346/474 (73.00%), Query Frame = 1

Query: 18  ETAQIYENAQIYENAQVQDNTLEQESTEEPENLHGLENEHVPETLELEPKEVHNEDTLAV 77
           E  Q+ + A      Q Q +  +    E  + +   + E +PE LE   K    ED    
Sbjct: 117 EQFQLQDEAHDQAQYQAQGDVQDHNGDEVQDKVE--DEEGIPEHLESLQKSEPEEDATVG 176

Query: 78  VGEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTAERAV 137
             EK+WPGWPGE+VFRMLVPAQKVGSIIGRKG+ IKKIVEETRARIKILDGPPGT ERAV
Sbjct: 177 GEEKRWPGWPGETVFRMLVPAQKVGSIIGRKGDVIKKIVEETRARIKILDGPPGTTERAV 236

Query: 138 MVSAKEEPDSDFPPAVDGLLRVHKRIVDGLEGDNANAPNMGGKVSTRLLVAASQAGSLIG 197
           MVS KEEP+S  PP++DGLLRVH RIVDGL+G+ + AP    KVSTRLLV ASQAGSLIG
Sbjct: 237 MVSGKEEPESSLPPSMDGLLRVHMRIVDGLDGEASQAPPPS-KVSTRLLVPASQAGSLIG 296

Query: 198 KQGGTVKSIQEESNCIVRVLGSEDLPVFALQDDRVVEVLGDPAGVHKAVELIASHLRKFL 257
           KQGGTVK+IQE S CIVRVLGSEDLPVFALQDDRVVEV+G+P  VH+A+ELIASHLRKFL
Sbjct: 297 KQGGTVKAIQEASACIVRVLGSEDLPVFALQDDRVVEVVGEPTSVHRALELIASHLRKFL 356

Query: 258 VDRSIIPVFE--MNMTNQQMEHMPPPHQSWGPPQGMPPNAGGGPGFGPN-PPYMPPPRQF 317
           VDRSIIP FE  M    +QM+HMPPPHQSWGPPQG  P+ GGG G+G N PPYM PP + 
Sbjct: 357 VDRSIIPFFENQMQKPTRQMDHMPPPHQSWGPPQGHAPSVGGG-GYGHNPPPYMQPPPRH 416

Query: 318 DNYYPPADM-PSAMDKQPHHGISAYGREAPMGVHPQTNAQSVPSIVTQTTQQMQIPLSFA 377
           D+YYPP +M    M+KQPH GISAYGRE PM VH    + + P +  Q TQQMQIPLS+A
Sbjct: 417 DSYYPPPEMRQPPMEKQPHQGISAYGREPPMNVHV---SSAPPMVAQQVTQQMQIPLSYA 476

Query: 378 DAVIGTAGASISYIRRASGATVTIQETRGVPGEMTVEMSGTAS---------QNFMAGAG 437
           DAVIGT+G++ISY RR SGATVTIQETRGVPGEMTVE+SGT S         QNFMA AG
Sbjct: 477 DAVIGTSGSNISYTRRLSGATVTIQETRGVPGEMTVEVSGTGSQVQTAVQLIQNFMAEAG 536

Query: 438 APAQAQAGGSA--DQGYNSY-TQGSVYASPPAANPGHASHAGGYGSVYSTNYGY 476
           APA AQ    A   QGYN Y T GSVYA+ P   P      GGY + YS+ YGY
Sbjct: 537 APAPAQPQTVAPEQQGYNPYATHGSVYAAAPTNPP------GGYATDYSSGYGY 577

BLAST of CmaCh12G011340 vs. TAIR10
Match: AT4G26000.1 (AT4G26000.1 RNA-binding KH domain-containing protein)

HSP 1 Score: 240.0 bits (611), Expect = 3.1e-63
Identity = 158/390 (40.51%), Postives = 225/390 (57.69%), Query Frame = 1

Query: 80  EKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTAERAVMV 139
           E++WPGWPG+ VFRM+VP  KVG+IIGRKG+FIKK+ EETRARIK+LDGP  T +R V++
Sbjct: 64  EERWPGWPGDCVFRMIVPVTKVGAIIGRKGDFIKKMCEETRARIKVLDGPVNTPDRIVLI 123

Query: 140 SAKEEPDSDFPPAVDGLLRVHKRIVDGLEGDNANAPNMGGKVST-RLLVAASQAGSLIGK 199
           S KEEP++   PA+D +LRV +R+    + D+ +  N G   S+ RLLVA++QA +LIGK
Sbjct: 124 SGKEEPEAYMSPAMDAVLRVFRRVSGLPDNDDDDVQNAGSVFSSVRLLVASTQAINLIGK 183

Query: 200 QGGTVKSIQEESNCIVRVLGSEDLPVFALQDDRVVEVLGDPAGVHKAVELIASHLRKFLV 259
           QG  +KSI E S   VR+L  E+ P +A QD+R+V++ G+   + KA+E I  HLR+FLV
Sbjct: 184 QGSLIKSIVENSGASVRILSEEETPFYAAQDERIVDLQGEALKILKALEAIVGHLRRFLV 243

Query: 260 DRSIIPVFEMNMTNQ--QMEHMPPPHQSWGPPQGMPPNAGGGPGFG----PNPPYMPPPR 319
           D +++P+FE     +  Q     P  +S      +  N    P F       P ++    
Sbjct: 244 DHTVVPLFEKQYLARVSQTRQEEPLAESKSSLHTISSNL-MEPDFSLLARREPLFLERDS 303

Query: 320 QFDNYYPPADMPSAMDKQPHHGISAYGREAPMGV-HPQTNAQSVPSIVTQTTQQMQIPLS 379
           + D+   P+            G+S Y ++  +   H    A+   + VTQ +Q MQIP S
Sbjct: 304 RVDSRVQPS------------GVSIYSQDPVLSARHSPGLARVSSAFVTQVSQTMQIPFS 363

Query: 380 FADAVIGTAGASISYIRRASGATVTIQETRGVPGEMTVEMSGTAS---------QNFMAG 439
           +A+ +IG  GA+I+YIRR SGAT+TI+E+   P ++TVE+ GT S         Q F+  
Sbjct: 364 YAEDIIGVEGANIAYIRRRSGATITIKESPH-PDQITVEIKGTTSQVQTAEQLIQEFIIN 423

Query: 440 AGAPAQAQAGGSADQGYNSYTQGSVYASPP 453
              P       S   GY     G V A PP
Sbjct: 424 HKEPV------SVSGGYARIDSGYVPAYPP 433

BLAST of CmaCh12G011340 vs. TAIR10
Match: AT5G15270.2 (AT5G15270.2 RNA-binding KH domain-containing protein)

HSP 1 Score: 106.7 bits (265), Expect = 4.0e-23
Identity = 55/174 (31.61%), Postives = 104/174 (59.77%), Query Frame = 1

Query: 89  ESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTAERAVMVSAKEEPDSD 148
           ++VFR L P +K+GS+IGR G+ +K++  +TR++I+I +  PG  ER + + +  +  + 
Sbjct: 49  DTVFRYLCPVKKIGSVIGRGGDIVKQLRNDTRSKIRIGEAIPGCDERVITIYSPSDETNA 108

Query: 149 F-------PPAVDGLLRVHKRIVDGLEGDNANAPNMGGKVSTRLLVAASQAGSLIGKQGG 208
           F        PA D L R+H R+V   +  + ++P    +V+ +LLV + Q G ++G+ G 
Sbjct: 109 FGDGEKVLSPAQDALFRIHDRVVAD-DARSEDSPEGEKQVTAKLLVPSDQIGCILGRGGQ 168

Query: 209 TVKSIQEESNCIVRVLGSEDLPVFALQDDRVVEVLGDPAGVHKAVELIASHLRK 256
            V++I+ E+   +R++   ++P+ AL  D ++++ G+   V KA+  IAS L +
Sbjct: 169 IVQNIRSETGAQIRIVKDRNMPLCALNSDELIQISGEVLIVKKALLQIASRLHE 221

BLAST of CmaCh12G011340 vs. TAIR10
Match: AT1G51580.1 (AT1G51580.1 RNA-binding KH domain-containing protein)

HSP 1 Score: 105.1 bits (261), Expect = 1.2e-22
Identity = 108/366 (29.51%), Postives = 165/366 (45.08%), Query Frame = 1

Query: 78  VGEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTAERAV 137
           VG    P    E  FR+L PA KVGS+IG+ G  ++ +  E+ A IK+ D    + ER +
Sbjct: 264 VGPFNRPVVEEEVAFRLLCPADKVGSLIGKGGAVVRALQNESGASIKVSDPTHDSEERII 323

Query: 138 MVSAKEEPDSDFPPAVDGLLRVHKRIVD-GLEGDNANAPNMGGKVSTRLLVAASQAGSLI 197
           ++SA+E  +     A DG++RVH RIV+ G E   A        V  RLLV +   G L+
Sbjct: 324 VISARENLERRHSLAQDGVMRVHNRIVEIGFEPSAA--------VVARLLVHSPYIGRLL 383

Query: 198 GKQGGTVKSIQEESNCIVRVLGSEDLPVFALQDDRVVEVLGDPAGVHKAVELIASHLRKF 257
           GK G  +  ++  +   +RV   +    +  Q D +V+V+G+   V  A+  I   LR+ 
Sbjct: 384 GKGGHLISEMRRATGASIRVFAKDQATKYESQHDEIVQVIGNLKTVQDALFQILCRLRE- 443

Query: 258 LVDRSIIPVFEMNMTNQQMEHMPPPHQSWGP-PQGMPPNAGGGPGFGPNPP--YMPPPRQ 317
                   +F   +  Q M   PPP    GP P+  PP    GP   P  P  Y  P   
Sbjct: 444 -------AMFPGRLPFQGMGGPPPPFM--GPYPEPPPP---FGPRQYPASPDRYHSPVGP 503

Query: 318 FDNYY--------PPAD----MPSAMDKQPHHGISAY-GREAPMGVHPQTNAQSVP---- 377
           F   +        PP       PS M   P  GI  + G   P  V+     ++ P    
Sbjct: 504 FHERHCHGPGFDRPPGPGFDRPPSPMSWTPQPGIDGHPGGMVPPDVNHGFALRNEPIGSE 563

Query: 378 -SIVTQTTQQMQIPLSFADAVIGTAGASISYIRRASGATVTIQETRGVPGEMTVEMSGTA 422
             ++T    ++ IP ++   V G   ++++YI++ SGA V + + +    E  V +SGT+
Sbjct: 564 NPVMTSANVEIVIPQAYLGHVYGENCSNLNYIKQVSGANVVVHDPKAGTTEGLVVVSGTS 608

BLAST of CmaCh12G011340 vs. TAIR10
Match: AT1G14170.3 (AT1G14170.3 RNA-binding KH domain-containing protein)

HSP 1 Score: 95.9 bits (237), Expect = 7.1e-20
Identity = 65/204 (31.86%), Postives = 112/204 (54.90%), Query Frame = 1

Query: 67  KEVHNEDTLAVVGEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKIL 126
           + +H+E    V+  +       ++V+R L P +K GSIIG+ GE  K+I  ET++ ++I 
Sbjct: 28  RNLHDETDQNVIASE-------DTVYRYLCPVKKTGSIIGKGGEIAKQIRSETKSNMRIN 87

Query: 127 DGPPGTAERAVMVSAKEEPDSDFP-------PAVDGLLRVHKRIV------DGLEGDNAN 186
           +  PG  ER V + +  E  + F        PA+D L +VH  +V      DG + DN  
Sbjct: 88  EALPGCEERVVTMYSTNEELNHFGDDGELVCPALDALFKVHDMVVADADQDDGTDDDN-- 147

Query: 187 APNMGGK--VSTRLLVAASQAGSLIGKQGGTVKSIQEESNCIVRVLGSEDLPVFA--LQD 246
             ++G K  V+ R+LV + Q G +IGK G  +++++ ++N  +RV+  + LP  A  L  
Sbjct: 148 --DLGEKQTVTVRMLVPSDQIGCVIGKGGQVIQNLRNDTNAQIRVI-KDHLPACALTLSH 207

Query: 247 DRVVEVLGDPAGVHKAVELIASHL 254
           D ++ ++G+P  V +A+  +AS L
Sbjct: 208 DELLLIIGEPLVVREALYQVASLL 219

BLAST of CmaCh12G011340 vs. NCBI nr
Match: gi|659070698|ref|XP_008456230.1| (PREDICTED: poly(rC)-binding protein 3 isoform X1 [Cucumis melo])

HSP 1 Score: 776.9 bits (2005), Expect = 2.0e-221
Identity = 426/492 (86.59%), Postives = 442/492 (89.84%), Query Frame = 1

Query: 1   MADVEQSYTHV-DDNEVDETAQIYENAQIYENAQVQDNTLEQESTEEPENLHGLENEHVP 60
           MADVEQ+YTHV DD++VDE      NAQIYENAQV D TLEQE+T+E ENLH L+NEH+P
Sbjct: 1   MADVEQNYTHVVDDDQVDE------NAQIYENAQVHDITLEQENTQEVENLHELQNEHIP 60

Query: 61  ETLELEPKEVHNEDTLAVVGEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEET 120
           ETLE EPK+VHNED L VV EKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEET
Sbjct: 61  ETLESEPKQVHNEDPLTVVSEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEET 120

Query: 121 RARIKILDGPPGTAERAVMVSAKEEPDSDFPPAVDGLLRVHKRIVDGLEGDNANAPNMGG 180
           RARIKILDGPPGTAERAVMVSAK+EPDS FPPAVDGLLRVHKRIVDGLEGDNA+APN G 
Sbjct: 121 RARIKILDGPPGTAERAVMVSAKDEPDSAFPPAVDGLLRVHKRIVDGLEGDNAHAPNAGS 180

Query: 181 KVSTRLLVAASQAGSLIGKQGGTVKSIQEESNCIVRVLGSEDLPVFALQDDRVVEVLGDP 240
           KVSTRLLVAASQAGSLIGKQGGTVKSIQEESNCIVRVLGSEDLPVFALQDDRVVEVLGDP
Sbjct: 181 KVSTRLLVAASQAGSLIGKQGGTVKSIQEESNCIVRVLGSEDLPVFALQDDRVVEVLGDP 240

Query: 241 AGVHKAVELIASHLRKFLVDRSIIPVFEMN--MTNQQM-EHM-PPPHQSWGPPQGMPPNA 300
           AGVHKAVELIASHLRKFLVDRSIIPVFEMN  M+N QM +HM PPPHQ WGPPQGMPPNA
Sbjct: 241 AGVHKAVELIASHLRKFLVDRSIIPVFEMNMQMSNPQMDQHMPPPPHQPWGPPQGMPPNA 300

Query: 301 GGGPGFGPNPP-YM-PPPRQFDNYYPPADMPSAMDKQPHHGISAYGREAPMGVHPQTNAQ 360
           GGGPGFGPNPP YM PPPRQFDNYYPPA+M + MDKQPHHGISAYGREAPMGVH  +NAQ
Sbjct: 301 GGGPGFGPNPPQYMPPPPRQFDNYYPPAEMQAVMDKQPHHGISAYGREAPMGVHAASNAQ 360

Query: 361 SVPSIVTQTTQQMQIPLSFADAVIGTAGASISYIRRASGATVTIQETRGVPGEMTVEMSG 420
           S PSIVTQTTQQMQIPLSFADAVIGTAGASISYIRRASGATVTIQETRGVPGEMTVEMSG
Sbjct: 361 SAPSIVTQTTQQMQIPLSFADAVIGTAGASISYIRRASGATVTIQETRGVPGEMTVEMSG 420

Query: 421 TAS---------QNFMAGAGAPAQAQAGGSADQGYNSY-TQGSVYASPPAANPGHASHAG 476
           TAS         QNFMAGAGAPAQ QAG S DQGYNSY   GSVYASPP ANP  A+HAG
Sbjct: 421 TASQVQAAQQLIQNFMAGAGAPAQPQAGVSTDQGYNSYAAHGSVYASPP-ANP--AAHAG 480

BLAST of CmaCh12G011340 vs. NCBI nr
Match: gi|659070700|ref|XP_008456234.1| (PREDICTED: poly(rC)-binding protein 3 isoform X2 [Cucumis melo])

HSP 1 Score: 770.4 bits (1988), Expect = 1.8e-219
Identity = 425/492 (86.38%), Postives = 441/492 (89.63%), Query Frame = 1

Query: 1   MADVEQSYTHV-DDNEVDETAQIYENAQIYENAQVQDNTLEQESTEEPENLHGLENEHVP 60
           MADVEQ+YTHV DD++VDE      NAQIYENAQV D TLEQE+T+E ENLH L+NEH+P
Sbjct: 1   MADVEQNYTHVVDDDQVDE------NAQIYENAQVHDITLEQENTQEVENLHELQNEHIP 60

Query: 61  ETLELEPKEVHNEDTLAVVGEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEET 120
           ETLE EPK+VHNED L VV EKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEET
Sbjct: 61  ETLESEPKQVHNEDPLTVVSEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEET 120

Query: 121 RARIKILDGPPGTAERAVMVSAKEEPDSDFPPAVDGLLRVHKRIVDGLEGDNANAPNMGG 180
           RARIKILDGPPGTAERAVMVSAK+EPDS FPPAVDGLLRVHKRIVDGLEGDNA+APN G 
Sbjct: 121 RARIKILDGPPGTAERAVMVSAKDEPDSAFPPAVDGLLRVHKRIVDGLEGDNAHAPNAGS 180

Query: 181 KVSTRLLVAASQAGSLIGKQGGTVKSIQEESNCIVRVLGSEDLPVFALQDDRVVEVLGDP 240
           KVSTRLLVAASQAGSLIGKQGGTVKSIQEESNCIVRVLGS DLPVFALQDDRVVEVLGDP
Sbjct: 181 KVSTRLLVAASQAGSLIGKQGGTVKSIQEESNCIVRVLGS-DLPVFALQDDRVVEVLGDP 240

Query: 241 AGVHKAVELIASHLRKFLVDRSIIPVFEMN--MTNQQM-EHM-PPPHQSWGPPQGMPPNA 300
           AGVHKAVELIASHLRKFLVDRSIIPVFEMN  M+N QM +HM PPPHQ WGPPQGMPPNA
Sbjct: 241 AGVHKAVELIASHLRKFLVDRSIIPVFEMNMQMSNPQMDQHMPPPPHQPWGPPQGMPPNA 300

Query: 301 GGGPGFGPNPP-YM-PPPRQFDNYYPPADMPSAMDKQPHHGISAYGREAPMGVHPQTNAQ 360
           GGGPGFGPNPP YM PPPRQFDNYYPPA+M + MDKQPHHGISAYGREAPMGVH  +NAQ
Sbjct: 301 GGGPGFGPNPPQYMPPPPRQFDNYYPPAEMQAVMDKQPHHGISAYGREAPMGVHAASNAQ 360

Query: 361 SVPSIVTQTTQQMQIPLSFADAVIGTAGASISYIRRASGATVTIQETRGVPGEMTVEMSG 420
           S PSIVTQTTQQMQIPLSFADAVIGTAGASISYIRRASGATVTIQETRGVPGEMTVEMSG
Sbjct: 361 SAPSIVTQTTQQMQIPLSFADAVIGTAGASISYIRRASGATVTIQETRGVPGEMTVEMSG 420

Query: 421 TAS---------QNFMAGAGAPAQAQAGGSADQGYNSY-TQGSVYASPPAANPGHASHAG 476
           TAS         QNFMAGAGAPAQ QAG S DQGYNSY   GSVYASPP ANP  A+HAG
Sbjct: 421 TASQVQAAQQLIQNFMAGAGAPAQPQAGVSTDQGYNSYAAHGSVYASPP-ANP--AAHAG 480

BLAST of CmaCh12G011340 vs. NCBI nr
Match: gi|449442959|ref|XP_004139248.1| (PREDICTED: flowering locus K homology domain isoform X1 [Cucumis sativus])

HSP 1 Score: 770.0 bits (1987), Expect = 2.4e-219
Identity = 423/492 (85.98%), Postives = 440/492 (89.43%), Query Frame = 1

Query: 1   MADVEQSYTHV-DDNEVDETAQIYENAQIYENAQVQDNTLEQESTEEPENLHGLENEHVP 60
           MADVEQ+YTHV DD++VDE      NAQIYENAQV D TLEQE+ +E ENLH L+NEH+P
Sbjct: 1   MADVEQNYTHVVDDDQVDE------NAQIYENAQVHDITLEQENAQEVENLHELQNEHIP 60

Query: 61  ETLELEPKEVHNEDTLAVVGEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEET 120
           ETLE EPK+VH ED L VV EKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEET
Sbjct: 61  ETLESEPKQVHIEDPLTVVSEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEET 120

Query: 121 RARIKILDGPPGTAERAVMVSAKEEPDSDFPPAVDGLLRVHKRIVDGLEGDNANAPNMGG 180
           RARIKILDGPPGTAERAVMVSAK+EPDS FPPAVDGLLRVHKRIVDGLEGDNA+APN G 
Sbjct: 121 RARIKILDGPPGTAERAVMVSAKDEPDSAFPPAVDGLLRVHKRIVDGLEGDNAHAPNAGS 180

Query: 181 KVSTRLLVAASQAGSLIGKQGGTVKSIQEESNCIVRVLGSEDLPVFALQDDRVVEVLGDP 240
           KVSTRLLVAASQAGSLIGKQGGTVKSIQEESNCIVRVLGSEDLPVFALQDDRVVEVLGDP
Sbjct: 181 KVSTRLLVAASQAGSLIGKQGGTVKSIQEESNCIVRVLGSEDLPVFALQDDRVVEVLGDP 240

Query: 241 AGVHKAVELIASHLRKFLVDRSIIPVFEMN--MTNQQM-EHM-PPPHQSWGPPQGMPPNA 300
           AGVHKAVELIASHLRKFLVDRSIIPVFEMN  M+N QM +HM PPPHQ WGPPQGMPPNA
Sbjct: 241 AGVHKAVELIASHLRKFLVDRSIIPVFEMNMQMSNPQMDQHMPPPPHQPWGPPQGMPPNA 300

Query: 301 GGGPGFGPNPP-YM-PPPRQFDNYYPPADMPSAMDKQPHHGISAYGREAPMGVHPQTNAQ 360
           GGGPGFGPNPP YM PPPRQFDNYYPPA+M + M+KQPHHGISAYGREAPMGVH  +NAQ
Sbjct: 301 GGGPGFGPNPPQYMPPPPRQFDNYYPPAEMQAVMEKQPHHGISAYGREAPMGVHAASNAQ 360

Query: 361 SVPSIVTQTTQQMQIPLSFADAVIGTAGASISYIRRASGATVTIQETRGVPGEMTVEMSG 420
           S PSIVTQTTQQMQIPLSFADAVIGTAGASISYIRRASGATVTIQETRGVPGEMTVEMSG
Sbjct: 361 SAPSIVTQTTQQMQIPLSFADAVIGTAGASISYIRRASGATVTIQETRGVPGEMTVEMSG 420

Query: 421 TAS---------QNFMAGAGAPAQAQAGGSADQGYNSY-TQGSVYASPPAANPGHASHAG 476
           TAS         QNFMAGAGAPAQ QAG S DQGYNSY   GSVYASPP ANP  A+HAG
Sbjct: 421 TASQVQAAQQLIQNFMAGAGAPAQPQAGVSTDQGYNSYAAHGSVYASPP-ANP--AAHAG 480

BLAST of CmaCh12G011340 vs. NCBI nr
Match: gi|700205668|gb|KGN60787.1| (hypothetical protein Csa_2G010230 [Cucumis sativus])

HSP 1 Score: 770.0 bits (1987), Expect = 2.4e-219
Identity = 423/492 (85.98%), Postives = 440/492 (89.43%), Query Frame = 1

Query: 1   MADVEQSYTHV-DDNEVDETAQIYENAQIYENAQVQDNTLEQESTEEPENLHGLENEHVP 60
           MADVEQ+YTHV DD++VDE      NAQIYENAQV D TLEQE+ +E ENLH L+NEH+P
Sbjct: 27  MADVEQNYTHVVDDDQVDE------NAQIYENAQVHDITLEQENAQEVENLHELQNEHIP 86

Query: 61  ETLELEPKEVHNEDTLAVVGEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEET 120
           ETLE EPK+VH ED L VV EKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEET
Sbjct: 87  ETLESEPKQVHIEDPLTVVSEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEET 146

Query: 121 RARIKILDGPPGTAERAVMVSAKEEPDSDFPPAVDGLLRVHKRIVDGLEGDNANAPNMGG 180
           RARIKILDGPPGTAERAVMVSAK+EPDS FPPAVDGLLRVHKRIVDGLEGDNA+APN G 
Sbjct: 147 RARIKILDGPPGTAERAVMVSAKDEPDSAFPPAVDGLLRVHKRIVDGLEGDNAHAPNAGS 206

Query: 181 KVSTRLLVAASQAGSLIGKQGGTVKSIQEESNCIVRVLGSEDLPVFALQDDRVVEVLGDP 240
           KVSTRLLVAASQAGSLIGKQGGTVKSIQEESNCIVRVLGSEDLPVFALQDDRVVEVLGDP
Sbjct: 207 KVSTRLLVAASQAGSLIGKQGGTVKSIQEESNCIVRVLGSEDLPVFALQDDRVVEVLGDP 266

Query: 241 AGVHKAVELIASHLRKFLVDRSIIPVFEMN--MTNQQM-EHM-PPPHQSWGPPQGMPPNA 300
           AGVHKAVELIASHLRKFLVDRSIIPVFEMN  M+N QM +HM PPPHQ WGPPQGMPPNA
Sbjct: 267 AGVHKAVELIASHLRKFLVDRSIIPVFEMNMQMSNPQMDQHMPPPPHQPWGPPQGMPPNA 326

Query: 301 GGGPGFGPNPP-YM-PPPRQFDNYYPPADMPSAMDKQPHHGISAYGREAPMGVHPQTNAQ 360
           GGGPGFGPNPP YM PPPRQFDNYYPPA+M + M+KQPHHGISAYGREAPMGVH  +NAQ
Sbjct: 327 GGGPGFGPNPPQYMPPPPRQFDNYYPPAEMQAVMEKQPHHGISAYGREAPMGVHAASNAQ 386

Query: 361 SVPSIVTQTTQQMQIPLSFADAVIGTAGASISYIRRASGATVTIQETRGVPGEMTVEMSG 420
           S PSIVTQTTQQMQIPLSFADAVIGTAGASISYIRRASGATVTIQETRGVPGEMTVEMSG
Sbjct: 387 SAPSIVTQTTQQMQIPLSFADAVIGTAGASISYIRRASGATVTIQETRGVPGEMTVEMSG 446

Query: 421 TAS---------QNFMAGAGAPAQAQAGGSADQGYNSY-TQGSVYASPPAANPGHASHAG 476
           TAS         QNFMAGAGAPAQ QAG S DQGYNSY   GSVYASPP ANP  A+HAG
Sbjct: 447 TASQVQAAQQLIQNFMAGAGAPAQPQAGVSTDQGYNSYAAHGSVYASPP-ANP--AAHAG 506

BLAST of CmaCh12G011340 vs. NCBI nr
Match: gi|778666444|ref|XP_011648742.1| (PREDICTED: flowering locus K homology domain isoform X2 [Cucumis sativus])

HSP 1 Score: 763.5 bits (1970), Expect = 2.3e-217
Identity = 422/492 (85.77%), Postives = 439/492 (89.23%), Query Frame = 1

Query: 1   MADVEQSYTHV-DDNEVDETAQIYENAQIYENAQVQDNTLEQESTEEPENLHGLENEHVP 60
           MADVEQ+YTHV DD++VDE      NAQIYENAQV D TLEQE+ +E ENLH L+NEH+P
Sbjct: 1   MADVEQNYTHVVDDDQVDE------NAQIYENAQVHDITLEQENAQEVENLHELQNEHIP 60

Query: 61  ETLELEPKEVHNEDTLAVVGEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEET 120
           ETLE EPK+VH ED L VV EKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEET
Sbjct: 61  ETLESEPKQVHIEDPLTVVSEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEET 120

Query: 121 RARIKILDGPPGTAERAVMVSAKEEPDSDFPPAVDGLLRVHKRIVDGLEGDNANAPNMGG 180
           RARIKILDGPPGTAERAVMVSAK+EPDS FPPAVDGLLRVHKRIVDGLEGDNA+APN G 
Sbjct: 121 RARIKILDGPPGTAERAVMVSAKDEPDSAFPPAVDGLLRVHKRIVDGLEGDNAHAPNAGS 180

Query: 181 KVSTRLLVAASQAGSLIGKQGGTVKSIQEESNCIVRVLGSEDLPVFALQDDRVVEVLGDP 240
           KVSTRLLVAASQAGSLIGKQGGTVKSIQEESNCIVRVLGS DLPVFALQDDRVVEVLGDP
Sbjct: 181 KVSTRLLVAASQAGSLIGKQGGTVKSIQEESNCIVRVLGS-DLPVFALQDDRVVEVLGDP 240

Query: 241 AGVHKAVELIASHLRKFLVDRSIIPVFEMN--MTNQQM-EHM-PPPHQSWGPPQGMPPNA 300
           AGVHKAVELIASHLRKFLVDRSIIPVFEMN  M+N QM +HM PPPHQ WGPPQGMPPNA
Sbjct: 241 AGVHKAVELIASHLRKFLVDRSIIPVFEMNMQMSNPQMDQHMPPPPHQPWGPPQGMPPNA 300

Query: 301 GGGPGFGPNPP-YM-PPPRQFDNYYPPADMPSAMDKQPHHGISAYGREAPMGVHPQTNAQ 360
           GGGPGFGPNPP YM PPPRQFDNYYPPA+M + M+KQPHHGISAYGREAPMGVH  +NAQ
Sbjct: 301 GGGPGFGPNPPQYMPPPPRQFDNYYPPAEMQAVMEKQPHHGISAYGREAPMGVHAASNAQ 360

Query: 361 SVPSIVTQTTQQMQIPLSFADAVIGTAGASISYIRRASGATVTIQETRGVPGEMTVEMSG 420
           S PSIVTQTTQQMQIPLSFADAVIGTAGASISYIRRASGATVTIQETRGVPGEMTVEMSG
Sbjct: 361 SAPSIVTQTTQQMQIPLSFADAVIGTAGASISYIRRASGATVTIQETRGVPGEMTVEMSG 420

Query: 421 TAS---------QNFMAGAGAPAQAQAGGSADQGYNSY-TQGSVYASPPAANPGHASHAG 476
           TAS         QNFMAGAGAPAQ QAG S DQGYNSY   GSVYASPP ANP  A+HAG
Sbjct: 421 TASQVQAAQQLIQNFMAGAGAPAQPQAGVSTDQGYNSYAAHGSVYASPP-ANP--AAHAG 480

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
FLK_ARATH5.5e-14764.35Flowering locus K homology domain OS=Arabidopsis thaliana GN=FLK PE=1 SV=1[more]
PEP_ARATH5.4e-6240.51RNA-binding KH domain-containing protein PEPPER OS=Arabidopsis thaliana GN=PEP P... [more]
HEN4_ARATH2.7e-1330.17KH domain-containing protein HEN4 OS=Arabidopsis thaliana GN=HEN4 PE=1 SV=1[more]
Y4837_ARATH2.7e-1327.51KH domain-containing protein At4g18375 OS=Arabidopsis thaliana GN=At4g18375 PE=2... [more]
PCBP1_BOVIN3.0e-1227.99Poly(rC)-binding protein 1 OS=Bos taurus GN=PCBP1 PE=2 SV=1[more]
Match NameE-valueIdentityDescription
A0A0A0LJ91_CUCSA1.7e-21985.98Uncharacterized protein OS=Cucumis sativus GN=Csa_2G010230 PE=4 SV=1[more]
A0A067JUM6_JATCU1.3e-18473.20Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23518 PE=4 SV=1[more]
M5VXP2_PRUPE9.6e-18374.48Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa003484mg PE=4 SV=1[more]
A0A0B0MUH2_GOSAR2.4e-18170.94Poly (RC)-binding 3 OS=Gossypium arboreum GN=F383_03998 PE=4 SV=1[more]
A0A061F946_THECC4.0e-18170.46RNA-binding KH domain-containing protein OS=Theobroma cacao GN=TCM_026308 PE=4 S... [more]
Match NameE-valueIdentityDescription
AT3G04610.13.1e-14864.35 RNA-binding KH domain-containing protein[more]
AT4G26000.13.1e-6340.51 RNA-binding KH domain-containing protein[more]
AT5G15270.24.0e-2331.61 RNA-binding KH domain-containing protein[more]
AT1G51580.11.2e-2229.51 RNA-binding KH domain-containing protein[more]
AT1G14170.37.1e-2031.86 RNA-binding KH domain-containing protein[more]
Match NameE-valueIdentityDescription
gi|659070698|ref|XP_008456230.1|2.0e-22186.59PREDICTED: poly(rC)-binding protein 3 isoform X1 [Cucumis melo][more]
gi|659070700|ref|XP_008456234.1|1.8e-21986.38PREDICTED: poly(rC)-binding protein 3 isoform X2 [Cucumis melo][more]
gi|449442959|ref|XP_004139248.1|2.4e-21985.98PREDICTED: flowering locus K homology domain isoform X1 [Cucumis sativus][more]
gi|700205668|gb|KGN60787.1|2.4e-21985.98hypothetical protein Csa_2G010230 [Cucumis sativus][more]
gi|778666444|ref|XP_011648742.1|2.3e-21785.77PREDICTED: flowering locus K homology domain isoform X2 [Cucumis sativus][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR004087KH_dom
IPR004088KH_dom_type_1
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO:0003723RNA binding
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009911 positive regulation of flower development
biological_process GO:0008150 biological_process
cellular_component GO:0005737 cytoplasm
cellular_component GO:0005634 nucleus
cellular_component GO:0005575 cellular_component
molecular_function GO:0003723 RNA binding
molecular_function GO:0003676 nucleic acid binding

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh12G011340.1CmaCh12G011340.1mRNA


Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004087K Homology domainSMARTSM00322kh_6coord: 360..430
score: 0.091coord: 88..168
score: 2.5E-8coord: 179..254
score: 5.8
IPR004088K Homology domain, type 1GENE3DG3DSA:3.30.1370.10coord: 179..255
score: 5.0E-18coord: 80..143
score: 1.5E-18coord: 361..421
score: 7.6
IPR004088K Homology domain, type 1PFAMPF00013KH_1coord: 92..142
score: 4.7E-11coord: 363..417
score: 7.2E-7coord: 183..250
score: 8.8
IPR004088K Homology domain, type 1PROFILEPS50084KH_TYPE_1coord: 180..249
score: 15.64coord: 89..156
score: 13.9coord: 361..414
score: 11
IPR004088K Homology domain, type 1unknownSSF54791Eukaryotic type KH-domain (KH-domain type I)coord: 353..421
score: 1.19E-9coord: 175..265
score: 6.14E-16coord: 83..143
score: 6.21
NoneNo IPR availablePANTHERPTHR10288KH DOMAIN CONTAINING RNA BINDING PROTEINcoord: 1..475
score: 7.8E
NoneNo IPR availablePANTHERPTHR10288:SF155SUBFAMILY NOT NAMEDcoord: 1..475
score: 7.8E