CmoCh12G011030 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh12G011030
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	GDSL esterase/lipase
Location	Cmo_Chr12 : 10083994 .. 10084642 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GATTAGGGTTTTCAGATTTCGACTCTGTAATCTCGCATTTCCCTTGTTTTCTCTCTTGTTTGATGCTTAGATTCTCGTTGGTTTGCAATGTTTTTGCAGTGGATGCGATGGATATGCCTTATTTGAATGCGAATCTTGATTCCCTTGACGCACCAAATTTTCGTAAGGGGTGCAATTATGCCGCTGCAGGCTCGACTATTCTTCCCGCAACAGCTACATCTTTTTGCCCTTTTTCATTTGGGGTTCAGGTGAATCAGTTTCTCCATTTCAAAGCTAGAGTTCTTGAGCTTCGAACAGGCAAAGGTATGATAGATTGTGAATGATCTCAAGAACATAAAACCATTTTCACTATTTTGTGATCATTTCTGTTGGTTTCTTTAGGTGGTAAGAAACTTGATAAGTACCTACCAGCTGATGATTACTTCCAGAAGGGGCTTTACATGTTTGATATTGGGCAGAATGATATTGCTGGTGCATTTTATTCCAAAACTTTGGACCAAATTCTTGCCTCAATACCTGCAATTTTATCTGAATTTGAGAGTGGAGTTCAGGTTAGACTCAATGGTTTCTTTCTAAGTTATCTTGGCTTAATGATGATTTTGTTTAGATGTGCTTTTACCTACTTGATTCTGAGTGTTTTGGAAGCTAG

mRNA sequence

GATTAGGGTTTTCAGATTTCGACTCTGTAATCTCGCATTTCCCTTGTTTTCTCTCTTGTTTGATGCTTAGATTCTCGTTGGTTTGCAATGTTTTTGCAGTGGATGCGATGGATATGCCTTATTTGAATGCGAATCTTGATTCCCTTGACGCACCAAATTTTCGTAAGGGGTGCAATTATGCCGCTGCAGGCTCGACTATTCTTCCCGCAACAGCTACATCTTTTTGCCCTTTTTCATTTGGGGTTCAGGTGAATCAGTTTCTCCATTTCAAAGCTAGAGTTCTTGAGCTTCGAACAGGCAAAGGTGGTAAGAAACTTGATAAGTACCTACCAGCTGATGATTACTTCCAGAAGGGGCTTTACATGTTTGATATTGGGCAGAATGATATTGCTGGTGCATTTTATTCCAAAACTTTGGACCAAATTCTTGCCTCAATACCTGCAATTTTATCTGAATTTGAGAGTGGAGTTCAGATGTGCTTTTACCTACTTGATTCTGAGTGTTTTGGAAGCTAG

Coding sequence (CDS)

ATGCTTAGATTCTCGTTGGTTTGCAATGTTTTTGCAGTGGATGCGATGGATATGCCTTATTTGAATGCGAATCTTGATTCCCTTGACGCACCAAATTTTCGTAAGGGGTGCAATTATGCCGCTGCAGGCTCGACTATTCTTCCCGCAACAGCTACATCTTTTTGCCCTTTTTCATTTGGGGTTCAGGTGAATCAGTTTCTCCATTTCAAAGCTAGAGTTCTTGAGCTTCGAACAGGCAAAGGTGGTAAGAAACTTGATAAGTACCTACCAGCTGATGATTACTTCCAGAAGGGGCTTTACATGTTTGATATTGGGCAGAATGATATTGCTGGTGCATTTTATTCCAAAACTTTGGACCAAATTCTTGCCTCAATACCTGCAATTTTATCTGAATTTGAGAGTGGAGTTCAGATGTGCTTTTACCTACTTGATTCTGAGTGTTTTGGAAGCTAG

Homology

[Close]

BLAST of CmoCh12G011030 vs. Swiss-Prot
Match: GDL22_ARATH (GDSL esterase/lipase At1g54790 OS=Arabidopsis thaliana GN=At1g54790 PE=2 SV=1)

HSP 1 Score: 177.6 bits (449), Expect = 1.0e-43
Identity = 84/130 (64.62%), Postives = 104/130 (80.00%), Query Frame = 1


Query: 11  FAVDAMDMPYLNANLDSLDAPNFRKGCNYAAAGSTILPATATSFCPFSFGVQVNQFLHFK 70
           F +D MD+P+LN  LDSL  PNF+KGCN+AAAGSTILPA  TS  PFSF +Q++QF+ FK
Sbjct: 78  FLMDEMDLPFLNPYLDSLGLPNFKKGCNFAAAGSTILPANPTSVSPFSFDLQISQFIRFK 137

Query: 71  ARVLELRTGKGGKKLDKYLPADDYFQKGLYMFDIGQNDIAGAFYSKTLDQILASIPAILS 130
           +R +EL   K G+K +KYLP  DY+ KGLYM DIGQNDIAGAFYSKTLDQ+LASIP+IL 
Sbjct: 138 SRAIEL-LSKTGRKYEKYLPPIDYYSKGLYMIDIGQNDIAGAFYSKTLDQVLASIPSILE 197

Query: 131 EFESGVQMCF 141
            FE+G++  +
Sbjct: 198 TFEAGLKRLY 206

[Close]

BLAST of CmoCh12G011030 vs. Swiss-Prot
Match: GDL49_ARATH (GDSL esterase/lipase At3g05180 OS=Arabidopsis thaliana GN=At3g05180 PE=2 SV=1)

HSP 1 Score: 147.5 bits (371), Expect = 1.2e-34
Identity = 69/130 (53.08%), Postives = 97/130 (74.62%), Query Frame = 1


Query: 11  FAVDAMDMPYLNANLDSLDAPNFRKGCNYAAAGSTILPATATSFCPFSFGVQVNQFLHFK 70
           F ++A+D PYL   LDS+    +R+GCN+AAA STI  A A S+ PF FGVQV+QF+ FK
Sbjct: 84  FLMEAIDRPYLRPYLDSISRQTYRRGCNFAAAASTIQKANAASYSPFGFGVQVSQFITFK 143

Query: 71  ARVLELRTGKGGKKLDKYLPADDYFQKGLYMFDIGQNDIAGAFYSKTLDQILASIPAILS 130
           ++VL+L   +  ++L +YLP++ +F  GLYMFDIGQNDIAGAFY+KT+DQ+LA +P IL 
Sbjct: 144 SKVLQLI--QQDEELQRYLPSEYFFSNGLYMFDIGQNDIAGAFYTKTVDQVLALVPIILD 203

Query: 131 EFESGVQMCF 141
            F+ G++  +
Sbjct: 204 IFQDGIKRLY 211

[Close]

BLAST of CmoCh12G011030 vs. Swiss-Prot
Match: GDL54_ARATH (GDSL esterase/lipase At3g27950 OS=Arabidopsis thaliana GN=At3g27950 PE=2 SV=1)

HSP 1 Score: 99.8 bits (247), Expect = 2.8e-20
Identity = 55/130 (42.31%), Postives = 74/130 (56.92%), Query Frame = 1


Query: 11  FAVDAMDMPYLNANLDSLDAPNFRKGCNYAAAGSTILPATATSFCPFSFGVQVNQFLHFK 70
           F  + + +PYL   LDS+ A N+R G N+A  GS I P T   F PF  G QV+QF+HFK
Sbjct: 78  FITENLTLPYLTPYLDSVGA-NYRHGANFATGGSCIRP-TLACFSPFHLGTQVSQFIHFK 137

Query: 71  ARVLELRTGKGGKKLDKYLPADDYFQKGLYMFDIGQNDIAGAFYSKTLDQILASIPAILS 130
            R L L     GK     L   +YF K LY  DIGQND+A  F + T +Q+ A+IP I+ 
Sbjct: 138 TRTLSLYNQTNGKF--NRLSHTNYFSKALYTLDIGQNDLAIGFQNMTEEQLKATIPLIIE 197

Query: 131 EFESGVQMCF 141
            F   +++ +
Sbjct: 198 NFTIALKLLY 203

[Close]

BLAST of CmoCh12G011030 vs. Swiss-Prot
Match: FUCO3_ARATH (Alpha-L-fucosidase 3 OS=Arabidopsis thaliana GN=FXG1 PE=2 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 2.6e-18
Identity = 55/132 (41.67%), Postives = 78/132 (59.09%), Query Frame = 1


Query: 11  FAVDAMDMPYLNANLDSLDAPNFRKGCNYAAAGSTILPATAT----SFCPFSFGVQVNQF 70
           F  +++ +PYL+A LDS+ + NF  G N+A AGS I    +T     F PFS  VQ  QF
Sbjct: 76  FIAESLGLPYLSAFLDSVGS-NFSHGANFATAGSPIRALNSTLRQSGFSPFSLDVQFVQF 135

Query: 71  LHFKARVLELRTGKGGKKLDKYLPADDYFQKGLYMFDIGQNDI-AGAFYSKTLDQILASI 130
            +F  R   +R+  G  K    LP  D F K LY FDIGQND+ AG F +KT++Q+   +
Sbjct: 136 YNFHNRSQTVRSRGGVYKT--MLPESDSFSKALYTFDIGQNDLTAGYFANKTVEQVETEV 195

Query: 131 PAILSEFESGVQ 138
           P I+S+F + ++
Sbjct: 196 PEIISQFMNAIK 204

[Close]

BLAST of CmoCh12G011030 vs. Swiss-Prot
Match: GDL76_ARATH (GDSL esterase/lipase At5g14450 OS=Arabidopsis thaliana GN=At5g14450 PE=2 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 7.5e-18
Identity = 54/131 (41.22%), Postives = 76/131 (58.02%), Query Frame = 1


Query: 11  FAVDAMDMPYLNANLDSLDAPNFRKGCNYAAAGSTILPATATSF----CPFSFGVQVNQF 70
           F  + + +PYL+A L+SL + NFR G N+A  GSTI     T F     PFS  +Q+ QF
Sbjct: 87  FIAERLGLPYLSAYLNSLGS-NFRHGANFATGGSTIRRQNETIFQYGISPFSLDMQIAQF 146

Query: 71  LHFKARVLELRTGKGGKKLDKYLPADDYFQKGLYMFDIGQNDIAGAFYSKTLDQILASIP 130
             FKAR   L T    +   + LP  + F K LY FDIGQND++  F + ++DQ+ A+IP
Sbjct: 147 DQFKARSALLFTQIKSRYDREKLPRQEEFAKALYTFDIGQNDLSVGFRTMSVDQLKATIP 206

Query: 131 AILSEFESGVQ 138
            I++   S V+
Sbjct: 207 DIVNHLASAVR 216

[Close]

BLAST of CmoCh12G011030 vs. TrEMBL
Match: A0A0A0LGA7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G020960 PE=4 SV=1)

HSP 1 Score: 235.3 bits (599), Expect = 4.7e-59
Identity = 114/130 (87.69%), Postives = 121/130 (93.08%), Query Frame = 1


Query: 11  FAVDAMDMPYLNANLDSLDAPNFRKGCNYAAAGSTILPATATSFCPFSFGVQVNQFLHFK 70
           F +DAMDMP+LNA LDSL APNFRKGCNYAAAGST+LPATATS  PFSFGVQVNQFLHFK
Sbjct: 74  FLLDAMDMPFLNAYLDSLGAPNFRKGCNYAAAGSTVLPATATSVSPFSFGVQVNQFLHFK 133

Query: 71  ARVLELRTGKGGKKLDKYLPADDYFQKGLYMFDIGQNDIAGAFYSKTLDQILASIPAILS 130
           ARVLELR GKGGKKLDKYLPA++YFQKGLYMFDIGQND+AGAFYSKTLDQILASIP IL+
Sbjct: 134 ARVLELREGKGGKKLDKYLPAEEYFQKGLYMFDIGQNDLAGAFYSKTLDQILASIPTILA 193

Query: 131 EFESGVQMCF 141
           EFESGVQ  F
Sbjct: 194 EFESGVQKLF 203

[Close]

BLAST of CmoCh12G011030 vs. TrEMBL
Match: A0A0A0LIJ5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G020920 PE=4 SV=1)

HSP 1 Score: 209.1 bits (531), Expect = 3.6e-51
Identity = 103/130 (79.23%), Postives = 114/130 (87.69%), Query Frame = 1


Query: 11  FAVDAMDMPYLNANLDSLDAPNFRKGCNYAAAGSTILPATATSFCPFSFGVQVNQFLHFK 70
           F +DAMDMPYLN  LDSL APNFRKGCNYAAA ST+LPAT TSF PFSFGVQVNQF+HFK
Sbjct: 76  FLLDAMDMPYLNPYLDSLGAPNFRKGCNYAAAASTVLPATPTSFSPFSFGVQVNQFIHFK 135

Query: 71  ARVLELRTGKGGKKLDKYLPADDYFQKGLYMFDIGQNDIAGAFYSKTLDQILASIPAILS 130
           ARVLELR+   GKKLDKYLP +DYF+KGLYMFDIGQND+A AFYSKTLDQILASIP IL+
Sbjct: 136 ARVLELRS--KGKKLDKYLPDEDYFEKGLYMFDIGQNDLAIAFYSKTLDQILASIPTILA 195

Query: 131 EFESGVQMCF 141
            FE+G+Q  +
Sbjct: 196 VFETGLQKLY 203

[Close]

BLAST of CmoCh12G011030 vs. TrEMBL
Match: A0A072UFG3_MEDTR (GDSL-like lipase/acylhydrolase OS=Medicago truncatula GN=MTR_7g113860 PE=4 SV=1)

HSP 1 Score: 206.1 bits (523), Expect = 3.1e-50
Identity = 97/131 (74.05%), Postives = 117/131 (89.31%), Query Frame = 1


Query: 10  VFAVDAMDMPYLNANLDSLDAPNFRKGCNYAAAGSTILPATATSFCPFSFGVQVNQFLHF 69
           +F+VDA+D+P+LNA LDSL  PNFRKGCN+AAAGSTILPATA+S CPFSFG+QV+QFL F
Sbjct: 7   LFSVDALDLPFLNAYLDSLGLPNFRKGCNFAAAGSTILPATASSICPFSFGIQVSQFLKF 66

Query: 70  KARVLELRTGKGGKKLDKYLPADDYFQKGLYMFDIGQNDIAGAFYSKTLDQILASIPAIL 129
           KAR LEL +GK G+K DKY+P++D F+KGLYMFDIGQND+AGAFYSKTLDQ+LASIP IL
Sbjct: 67  KARALELLSGK-GRKFDKYVPSEDIFEKGLYMFDIGQNDLAGAFYSKTLDQVLASIPTIL 126

Query: 130 SEFESGVQMCF 141
            EFESG++  +
Sbjct: 127 LEFESGIKRLY 136

[Close]

BLAST of CmoCh12G011030 vs. TrEMBL
Match: I3S1I9_MEDTR (Uncharacterized protein OS=Medicago truncatula PE=2 SV=1)

HSP 1 Score: 204.1 bits (518), Expect = 1.2e-49
Identity = 96/130 (73.85%), Postives = 115/130 (88.46%), Query Frame = 1


Query: 11  FAVDAMDMPYLNANLDSLDAPNFRKGCNYAAAGSTILPATATSFCPFSFGVQVNQFLHFK 70
           F +DA+D+P+LNA LDSL  PNFRKGCN+AAAGSTILPATA+S CPFSFG+QV+QFL FK
Sbjct: 76  FLMDALDLPFLNAYLDSLGLPNFRKGCNFAAAGSTILPATASSICPFSFGIQVSQFLKFK 135

Query: 71  ARVLELRTGKGGKKLDKYLPADDYFQKGLYMFDIGQNDIAGAFYSKTLDQILASIPAILS 130
           AR LEL +GK G+K DKY+P++D F+KGLYMFDIGQND+AGAFYSKTLDQ+LASIP IL 
Sbjct: 136 ARALELLSGK-GRKFDKYVPSEDIFEKGLYMFDIGQNDLAGAFYSKTLDQVLASIPTILL 195

Query: 131 EFESGVQMCF 141
           EFESG++  +
Sbjct: 196 EFESGIKRLY 204

[Close]

BLAST of CmoCh12G011030 vs. TrEMBL
Match: Q2HTP0_MEDTR (GDSL-like lipase/acylhydrolase OS=Medicago truncatula GN=MTR_7g113860 PE=4 SV=1)

HSP 1 Score: 204.1 bits (518), Expect = 1.2e-49
Identity = 96/130 (73.85%), Postives = 115/130 (88.46%), Query Frame = 1


Query: 11  FAVDAMDMPYLNANLDSLDAPNFRKGCNYAAAGSTILPATATSFCPFSFGVQVNQFLHFK 70
           F +DA+D+P+LNA LDSL  PNFRKGCN+AAAGSTILPATA+S CPFSFG+QV+QFL FK
Sbjct: 76  FLMDALDLPFLNAYLDSLGLPNFRKGCNFAAAGSTILPATASSICPFSFGIQVSQFLKFK 135

Query: 71  ARVLELRTGKGGKKLDKYLPADDYFQKGLYMFDIGQNDIAGAFYSKTLDQILASIPAILS 130
           AR LEL +GK G+K DKY+P++D F+KGLYMFDIGQND+AGAFYSKTLDQ+LASIP IL 
Sbjct: 136 ARALELLSGK-GRKFDKYVPSEDIFEKGLYMFDIGQNDLAGAFYSKTLDQVLASIPTILL 195

Query: 131 EFESGVQMCF 141
           EFESG++  +
Sbjct: 196 EFESGIKRLY 204

[Close]

BLAST of CmoCh12G011030 vs. TAIR10
Match: AT1G54790.2 (AT1G54790.2 GDSL-like Lipase/Acylhydrolase superfamily protein)

HSP 1 Score: 177.6 bits (449), Expect = 5.9e-45
Identity = 84/130 (64.62%), Postives = 104/130 (80.00%), Query Frame = 1


Query: 11  FAVDAMDMPYLNANLDSLDAPNFRKGCNYAAAGSTILPATATSFCPFSFGVQVNQFLHFK 70
           F +D MD+P+LN  LDSL  PNF+KGCN+AAAGSTILPA  TS  PFSF +Q++QF+ FK
Sbjct: 78  FLMDEMDLPFLNPYLDSLGLPNFKKGCNFAAAGSTILPANPTSVSPFSFDLQISQFIRFK 137

Query: 71  ARVLELRTGKGGKKLDKYLPADDYFQKGLYMFDIGQNDIAGAFYSKTLDQILASIPAILS 130
           +R +EL   K G+K +KYLP  DY+ KGLYM DIGQNDIAGAFYSKTLDQ+LASIP+IL 
Sbjct: 138 SRAIEL-LSKTGRKYEKYLPPIDYYSKGLYMIDIGQNDIAGAFYSKTLDQVLASIPSILE 197

Query: 131 EFESGVQMCF 141
            FE+G++  +
Sbjct: 198 TFEAGLKRLY 206

[Close]

BLAST of CmoCh12G011030 vs. TAIR10
Match: AT3G05180.1 (AT3G05180.1 GDSL-like Lipase/Acylhydrolase superfamily protein)

HSP 1 Score: 147.5 bits (371), Expect = 6.5e-36
Identity = 69/130 (53.08%), Postives = 97/130 (74.62%), Query Frame = 1


Query: 11  FAVDAMDMPYLNANLDSLDAPNFRKGCNYAAAGSTILPATATSFCPFSFGVQVNQFLHFK 70
           F ++A+D PYL   LDS+    +R+GCN+AAA STI  A A S+ PF FGVQV+QF+ FK
Sbjct: 84  FLMEAIDRPYLRPYLDSISRQTYRRGCNFAAAASTIQKANAASYSPFGFGVQVSQFITFK 143

Query: 71  ARVLELRTGKGGKKLDKYLPADDYFQKGLYMFDIGQNDIAGAFYSKTLDQILASIPAILS 130
           ++VL+L   +  ++L +YLP++ +F  GLYMFDIGQNDIAGAFY+KT+DQ+LA +P IL 
Sbjct: 144 SKVLQLI--QQDEELQRYLPSEYFFSNGLYMFDIGQNDIAGAFYTKTVDQVLALVPIILD 203

Query: 131 EFESGVQMCF 141
            F+ G++  +
Sbjct: 204 IFQDGIKRLY 211

[Close]

BLAST of CmoCh12G011030 vs. TAIR10
Match: AT1G67830.1 (AT1G67830.1 alpha-fucosidase 1)

HSP 1 Score: 93.2 bits (230), Expect = 1.5e-19
Identity = 55/132 (41.67%), Postives = 78/132 (59.09%), Query Frame = 1


Query: 11  FAVDAMDMPYLNANLDSLDAPNFRKGCNYAAAGSTILPATAT----SFCPFSFGVQVNQF 70
           F  +++ +PYL+A LDS+ + NF  G N+A AGS I    +T     F PFS  VQ  QF
Sbjct: 76  FIAESLGLPYLSAFLDSVGS-NFSHGANFATAGSPIRALNSTLRQSGFSPFSLDVQFVQF 135

Query: 71  LHFKARVLELRTGKGGKKLDKYLPADDYFQKGLYMFDIGQNDI-AGAFYSKTLDQILASI 130
            +F  R   +R+  G  K    LP  D F K LY FDIGQND+ AG F +KT++Q+   +
Sbjct: 136 YNFHNRSQTVRSRGGVYKT--MLPESDSFSKALYTFDIGQNDLTAGYFANKTVEQVETEV 195

Query: 131 PAILSEFESGVQ 138
           P I+S+F + ++
Sbjct: 196 PEIISQFMNAIK 204

[Close]

BLAST of CmoCh12G011030 vs. TAIR10
Match: AT3G27950.1 (AT3G27950.1 GDSL-like Lipase/Acylhydrolase superfamily protein)

HSP 1 Score: 92.0 bits (227), Expect = 3.3e-19
Identity = 53/130 (40.77%), Postives = 72/130 (55.38%), Query Frame = 1


Query: 11  FAVDAMDMPYLNANLDSLDAPNFRKGCNYAAAGSTILPATATSFCPFSFGVQVNQFLHFK 70
           F  + + +PYL   LDS+ A N+R G N+A  GS I P T   F PF  G QV+QF+HFK
Sbjct: 78  FITENLTLPYLTPYLDSVGA-NYRHGANFATGGSCIRP-TLACFSPFHLGTQVSQFIHFK 137

Query: 71  ARVLELRTGKGGKKLDKYLPADDYFQKGLYMFDIGQNDIAGAFYSKTLDQILASIPAILS 130
            R L L           Y   +D F K LY  DIGQND+A  F + T +Q+ A+IP I+ 
Sbjct: 138 TRTLSL-----------YNQTND-FSKALYTLDIGQNDLAIGFQNMTEEQLKATIPLIIE 193

Query: 131 EFESGVQMCF 141
            F   +++ +
Sbjct: 198 NFTIALKLLY 193

[Close]

BLAST of CmoCh12G011030 vs. TAIR10
Match: AT5G14450.1 (AT5G14450.1 GDSL-like Lipase/Acylhydrolase superfamily protein)

HSP 1 Score: 91.7 bits (226), Expect = 4.2e-19
Identity = 54/131 (41.22%), Postives = 76/131 (58.02%), Query Frame = 1


Query: 11  FAVDAMDMPYLNANLDSLDAPNFRKGCNYAAAGSTILPATATSF----CPFSFGVQVNQF 70
           F  + + +PYL+A L+SL + NFR G N+A  GSTI     T F     PFS  +Q+ QF
Sbjct: 87  FIAERLGLPYLSAYLNSLGS-NFRHGANFATGGSTIRRQNETIFQYGISPFSLDMQIAQF 146

Query: 71  LHFKARVLELRTGKGGKKLDKYLPADDYFQKGLYMFDIGQNDIAGAFYSKTLDQILASIP 130
             FKAR   L T    +   + LP  + F K LY FDIGQND++  F + ++DQ+ A+IP
Sbjct: 147 DQFKARSALLFTQIKSRYDREKLPRQEEFAKALYTFDIGQNDLSVGFRTMSVDQLKATIP 206

Query: 131 AILSEFESGVQ 138
            I++   S V+
Sbjct: 207 DIVNHLASAVR 216

[Close]

BLAST of CmoCh12G011030 vs. NCBI nr
Match: gi|449442851|ref|XP_004139194.1| (PREDICTED: GDSL esterase/lipase At1g54790 isoform X2 [Cucumis sativus])

HSP 1 Score: 235.3 bits (599), Expect = 6.7e-59
Identity = 114/130 (87.69%), Postives = 121/130 (93.08%), Query Frame = 1


Query: 11  FAVDAMDMPYLNANLDSLDAPNFRKGCNYAAAGSTILPATATSFCPFSFGVQVNQFLHFK 70
           F +DAMDMP+LNA LDSL APNFRKGCNYAAAGST+LPATATS  PFSFGVQVNQFLHFK
Sbjct: 74  FLLDAMDMPFLNAYLDSLGAPNFRKGCNYAAAGSTVLPATATSVSPFSFGVQVNQFLHFK 133

Query: 71  ARVLELRTGKGGKKLDKYLPADDYFQKGLYMFDIGQNDIAGAFYSKTLDQILASIPAILS 130
           ARVLELR GKGGKKLDKYLPA++YFQKGLYMFDIGQND+AGAFYSKTLDQILASIP IL+
Sbjct: 134 ARVLELREGKGGKKLDKYLPAEEYFQKGLYMFDIGQNDLAGAFYSKTLDQILASIPTILA 193

Query: 131 EFESGVQMCF 141
           EFESGVQ  F
Sbjct: 194 EFESGVQKLF 203

[Close]

BLAST of CmoCh12G011030 vs. NCBI nr
Match: gi|778666725|ref|XP_011648799.1| (PREDICTED: GDSL esterase/lipase At1g54790 isoform X1 [Cucumis sativus])

HSP 1 Score: 235.3 bits (599), Expect = 6.7e-59
Identity = 114/130 (87.69%), Postives = 121/130 (93.08%), Query Frame = 1


Query: 11  FAVDAMDMPYLNANLDSLDAPNFRKGCNYAAAGSTILPATATSFCPFSFGVQVNQFLHFK 70
           F +DAMDMP+LNA LDSL APNFRKGCNYAAAGST+LPATATS  PFSFGVQVNQFLHFK
Sbjct: 80  FIMDAMDMPFLNAYLDSLGAPNFRKGCNYAAAGSTVLPATATSVSPFSFGVQVNQFLHFK 139

Query: 71  ARVLELRTGKGGKKLDKYLPADDYFQKGLYMFDIGQNDIAGAFYSKTLDQILASIPAILS 130
           ARVLELR GKGGKKLDKYLPA++YFQKGLYMFDIGQND+AGAFYSKTLDQILASIP IL+
Sbjct: 140 ARVLELREGKGGKKLDKYLPAEEYFQKGLYMFDIGQNDLAGAFYSKTLDQILASIPTILA 199

Query: 131 EFESGVQMCF 141
           EFESGVQ  F
Sbjct: 200 EFESGVQKLF 209

[Close]

BLAST of CmoCh12G011030 vs. NCBI nr
Match: gi|659070436|ref|XP_008455063.1| (PREDICTED: GDSL esterase/lipase At1g54790-like isoform X2 [Cucumis melo])

HSP 1 Score: 235.0 bits (598), Expect = 8.8e-59
Identity = 113/130 (86.92%), Postives = 121/130 (93.08%), Query Frame = 1


Query: 11  FAVDAMDMPYLNANLDSLDAPNFRKGCNYAAAGSTILPATATSFCPFSFGVQVNQFLHFK 70
           F +DAMDMP+LNA LDS+ APNFRKGCNYAAAGST+LPATATS  PFSFGVQVNQFLHFK
Sbjct: 74  FLLDAMDMPFLNAYLDSIGAPNFRKGCNYAAAGSTVLPATATSVSPFSFGVQVNQFLHFK 133

Query: 71  ARVLELRTGKGGKKLDKYLPADDYFQKGLYMFDIGQNDIAGAFYSKTLDQILASIPAILS 130
           ARVLELR GKGGKKLDKYLPA+DYFQKGLYMFDIGQND+AGAFYSKTLDQILASIP IL+
Sbjct: 134 ARVLELREGKGGKKLDKYLPAEDYFQKGLYMFDIGQNDLAGAFYSKTLDQILASIPTILA 193

Query: 131 EFESGVQMCF 141
           EFESGVQ  +
Sbjct: 194 EFESGVQRLY 203

[Close]

BLAST of CmoCh12G011030 vs. NCBI nr
Match: gi|659070434|ref|XP_008455055.1| (PREDICTED: GDSL esterase/lipase At1g54790-like isoform X1 [Cucumis melo])

HSP 1 Score: 235.0 bits (598), Expect = 8.8e-59
Identity = 113/130 (86.92%), Postives = 121/130 (93.08%), Query Frame = 1


Query: 11  FAVDAMDMPYLNANLDSLDAPNFRKGCNYAAAGSTILPATATSFCPFSFGVQVNQFLHFK 70
           F +DAMDMP+LNA LDS+ APNFRKGCNYAAAGST+LPATATS  PFSFGVQVNQFLHFK
Sbjct: 80  FIMDAMDMPFLNAYLDSIGAPNFRKGCNYAAAGSTVLPATATSVSPFSFGVQVNQFLHFK 139

Query: 71  ARVLELRTGKGGKKLDKYLPADDYFQKGLYMFDIGQNDIAGAFYSKTLDQILASIPAILS 130
           ARVLELR GKGGKKLDKYLPA+DYFQKGLYMFDIGQND+AGAFYSKTLDQILASIP IL+
Sbjct: 140 ARVLELREGKGGKKLDKYLPAEDYFQKGLYMFDIGQNDLAGAFYSKTLDQILASIPTILA 199

Query: 131 EFESGVQMCF 141
           EFESGVQ  +
Sbjct: 200 EFESGVQRLY 209

[Close]

BLAST of CmoCh12G011030 vs. NCBI nr
Match: gi|778666714|ref|XP_004139196.2| (PREDICTED: GDSL esterase/lipase At1g54790 [Cucumis sativus])

HSP 1 Score: 209.1 bits (531), Expect = 5.2e-51
Identity = 103/130 (79.23%), Postives = 114/130 (87.69%), Query Frame = 1


Query: 11  FAVDAMDMPYLNANLDSLDAPNFRKGCNYAAAGSTILPATATSFCPFSFGVQVNQFLHFK 70
           F +DAMDMPYLN  LDSL APNFRKGCNYAAA ST+LPAT TSF PFSFGVQVNQF+HFK
Sbjct: 76  FLLDAMDMPYLNPYLDSLGAPNFRKGCNYAAAASTVLPATPTSFSPFSFGVQVNQFIHFK 135

Query: 71  ARVLELRTGKGGKKLDKYLPADDYFQKGLYMFDIGQNDIAGAFYSKTLDQILASIPAILS 130
           ARVLELR+   GKKLDKYLP +DYF+KGLYMFDIGQND+A AFYSKTLDQILASIP IL+
Sbjct: 136 ARVLELRS--KGKKLDKYLPDEDYFEKGLYMFDIGQNDLAIAFYSKTLDQILASIPTILA 195

Query: 131 EFESGVQMCF 141
            FE+G+Q  +
Sbjct: 196 VFETGLQKLY 203

The following BLAST results are available for this feature:

BLAST of CmoCh12G011030 vs. Swiss-Prot


Match Name	E-value	Identity	Description
GDL22_ARATH	1.0e-43	64.62	GDSL esterase/lipase At1g54790 OS=Arabidopsis thaliana GN=At1g54790 PE=2 SV=1	[more]
GDL49_ARATH	1.2e-34	53.08	GDSL esterase/lipase At3g05180 OS=Arabidopsis thaliana GN=At3g05180 PE=2 SV=1	[more]
GDL54_ARATH	2.8e-20	42.31	GDSL esterase/lipase At3g27950 OS=Arabidopsis thaliana GN=At3g27950 PE=2 SV=1	[more]
FUCO3_ARATH	2.6e-18	41.67	Alpha-L-fucosidase 3 OS=Arabidopsis thaliana GN=FXG1 PE=2 SV=1	[more]
GDL76_ARATH	7.5e-18	41.22	GDSL esterase/lipase At5g14450 OS=Arabidopsis thaliana GN=At5g14450 PE=2 SV=1	[more]

BLAST of CmoCh12G011030 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LGA7_CUCSA	4.7e-59	87.69	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G020960 PE=4 SV=1	[more]
A0A0A0LIJ5_CUCSA	3.6e-51	79.23	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G020920 PE=4 SV=1	[more]
A0A072UFG3_MEDTR	3.1e-50	74.05	GDSL-like lipase/acylhydrolase OS=Medicago truncatula GN=MTR_7g113860 PE=4 SV=1	[more]
I3S1I9_MEDTR	1.2e-49	73.85	Uncharacterized protein OS=Medicago truncatula PE=2 SV=1	[more]
Q2HTP0_MEDTR	1.2e-49	73.85	GDSL-like lipase/acylhydrolase OS=Medicago truncatula GN=MTR_7g113860 PE=4 SV=1	[more]

BLAST of CmoCh12G011030 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G54790.2	5.9e-45	64.62	GDSL-like Lipase/Acylhydrolase superfamily protein	[more]
AT3G05180.1	6.5e-36	53.08	GDSL-like Lipase/Acylhydrolase superfamily protein	[more]
AT1G67830.1	1.5e-19	41.67	alpha-fucosidase 1	[more]
AT3G27950.1	3.3e-19	40.77	GDSL-like Lipase/Acylhydrolase superfamily protein	[more]
AT5G14450.1	4.2e-19	41.22	GDSL-like Lipase/Acylhydrolase superfamily protein	[more]

BLAST of CmoCh12G011030 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449442851\|ref\|XP_004139194.1\|	6.7e-59	87.69	PREDICTED: GDSL esterase/lipase At1g54790 isoform X2 [Cucumis sativus]	[more]
gi\|778666725\|ref\|XP_011648799.1\|	6.7e-59	87.69	PREDICTED: GDSL esterase/lipase At1g54790 isoform X1 [Cucumis sativus]	[more]
gi\|659070436\|ref\|XP_008455063.1\|	8.8e-59	86.92	PREDICTED: GDSL esterase/lipase At1g54790-like isoform X2 [Cucumis melo]	[more]
gi\|659070434\|ref\|XP_008455055.1\|	8.8e-59	86.92	PREDICTED: GDSL esterase/lipase At1g54790-like isoform X1 [Cucumis melo]	[more]
gi\|778666714\|ref\|XP_004139196.2\|	5.2e-51	79.23	PREDICTED: GDSL esterase/lipase At1g54790 [Cucumis sativus]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008152	metabolic process
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0016788	hydrolase activity, acting on ester bonds
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh12G011030.1	CmoCh12G011030.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR22835	ZINC FINGER FYVE DOMAIN CONTAINING PROTEIN	coord: 11..137 score: 2.5
None	No IPR available	PANTHER	PTHR22835:SF208	SUBFAMILY NOT NAMED	coord: 11..137 score: 2.5

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh12G011030	Lsi11G005170	Bottle gourd (USVL1VR-Ls)	cmolsiB148
CmoCh12G011030	Cp4.1LG11g09540	Cucurbita pepo (Zucchini)	cmocpeB147
CmoCh12G011030	Cp4.1LG07g09100	Cucurbita pepo (Zucchini)	cmocpeB175
CmoCh12G011030	MELO3C004299.2	Melon (DHL92) v3.6.1	cmomedB177
CmoCh12G011030	CsaV3_2G004920	Cucumber (Chinese Long) v3	cmocucB0185
CmoCh12G011030	Cla97C02G041810	Watermelon (97103) v2	cmowmbB161
CmoCh12G011030	CsGy2G003700	Cucumber (Gy14) v2	cgybcmoB170
CmoCh12G011030	Carg12884	Silver-seed gourd	carcmoB1212
CmoCh12G011030	Carg17560	Silver-seed gourd	carcmoB0973

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmoCh12G011030	CmoCh05G011690	Cucurbita moschata (Rifu)	cmocmoB148

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh12G011030	Wax gourd	cmowgoB0229
CmoCh12G011030	Cucumber (Gy14) v1	cgycmoB0174
CmoCh12G011030	Cucurbita maxima (Rimu)	cmacmoB177
CmoCh12G011030	Cucurbita maxima (Rimu)	cmacmoB763
CmoCh12G011030	Wild cucumber (PI 183967)	cmocpiB159
CmoCh12G011030	Cucumber (Chinese Long) v2	cmocuB157
CmoCh12G011030	Melon (DHL92) v3.5.1	cmomeB161
CmoCh12G011030	Watermelon (Charleston Gray)	cmowcgB144
CmoCh12G011030	Watermelon (97103) v1	cmowmB156
CmoCh12G011030	Cucumber (Gy14) v2	cgybcmoB050