Carg17560 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg17560
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	GDSL esterase/lipase
Location	Cucurbita_argyrosperma_scaffold_183 : 237411 .. 237956 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTTAGATTCTCGTCGGTGTGCAATGTTTTTGCAGTGGATGCGATGGATATGCCTTATTTGAATGCGAATCTTGATTCCCTTGGCGCACCAAATTTTTGTAAGCGGTGCAATTATGCCGCTGTAGGCTCGACTATTCTTCCCGCAACAGCTACATCTTTTTGCCCTTTTTCATTTGGGGTTCAGGTGAATCAGTTTCTCCATTTCAAAGCTAGAGTTCTTGAGCTTCGAACAGGCAAAGGTATGATAGATTGTGAATGATCTCAAGAACATAAAACCATTTTCACTATTTTGTGATCATTTCTGTTGGTTTCTTTAGGCGGTAAGAAACTTGGTAAGTACCTACCAGCTGATGATTACTTCCAGAAGGGGCTTTACATGTTTGATATTGGGCAGAATGATATTGCTGGTGCATTTTATTCCAAAACTTTGGACCAAATTCTTGCCTCAATACCTGCAATTTTATCTGAATTTGAGAGTGGAGTTCAGGTTAGACTCAATGGTTTCTTTCTAAGTTATCTTGGCTTAATGATGATTTTGTTTAGA

mRNA sequence

ATGCTTAGATTCTCGTCGGTGTGCAATGTTTTTGCAGTGGATGCGATGGATATGCCTTATTTGAATGCGAATCTTGATTCCCTTGGCGCACCAAATTTTTGTAAGCGGTGCAATTATGCCGCTGTAGGCTCGACTATTCTTCCCGCAACAGCTACATCTTTTTGCCCTTTTTCATTTGGGGTTCAGGTGAATCAGTTTCTCCATTTCAAAGCTAGAGTTCTTGAGCTTCGAACAGGCAAAGGCGGTAAGAAACTTGGTAAGTACCTACCAGCTGATGATTACTTCCAGAAGGGGCTTTACATGTTTGATATTGGGCAGAATGATATTGCTGGTGCATTTTATTCCAAAACTTTGGACCAAATTCTTGCCTCAATACCTGCAATTTTATCTGAATTTGAGAGTGGAGTTCAGGTTAGACTCAATGGTTTCTTTCTAAGTTATCTTGGCTTAATGATGATTTTGTTTAGA

Coding sequence (CDS)

ATGCTTAGATTCTCGTCGGTGTGCAATGTTTTTGCAGTGGATGCGATGGATATGCCTTATTTGAATGCGAATCTTGATTCCCTTGGCGCACCAAATTTTTGTAAGCGGTGCAATTATGCCGCTGTAGGCTCGACTATTCTTCCCGCAACAGCTACATCTTTTTGCCCTTTTTCATTTGGGGTTCAGGTGAATCAGTTTCTCCATTTCAAAGCTAGAGTTCTTGAGCTTCGAACAGGCAAAGGCGGTAAGAAACTTGGTAAGTACCTACCAGCTGATGATTACTTCCAGAAGGGGCTTTACATGTTTGATATTGGGCAGAATGATATTGCTGGTGCATTTTATTCCAAAACTTTGGACCAAATTCTTGCCTCAATACCTGCAATTTTATCTGAATTTGAGAGTGGAGTTCAGGTTAGACTCAATGGTTTCTTTCTAAGTTATCTTGGCTTAATGATGATTTTGTTTAGA

Protein sequence

MLRFSSVCNVFAVDAMDMPYLNANLDSLGAPNFCKRCNYAAVGSTILPATATSFCPFSFGVQVNQFLHFKARVLELRTGKGGKKLGKYLPADDYFQKGLYMFDIGQNDIAGAFYSKTLDQILASIPAILSEFESGVQVRLNGFFLSYLGLMMILFR

Homology

[Close]

BLAST of Carg17560 vs. NCBI nr
Match: XP_022937635.1 (GDSL esterase/lipase At1g54790-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 299.7 bits (766), Expect = 5.9e-78
Identity = 150/156 (96.15%), Postives = 150/156 (96.15%), Query Frame = 0


Query: 1   MLRFSSVCNVFAVDAMDMPYLNANLDSLGAPNFCKRCNYAAVGSTILPATATSFCPFSFG 60
           MLRFS VCNVFAVDAMDMPYLNANLDSL APNF K CNYAA GSTILPATATSFCPFSFG
Sbjct: 1   MLRFSLVCNVFAVDAMDMPYLNANLDSLDAPNFRKGCNYAAAGSTILPATATSFCPFSFG 60

Query: 61  VQVNQFLHFKARVLELRTGKGGKKLGKYLPADDYFQKGLYMFDIGQNDIAGAFYSKTLDQ 120
           VQVNQFLHFKARVLELRTGKGGKKL KYLPADDYFQKGLYMFDIGQNDIAGAFYSKTLDQ
Sbjct: 61  VQVNQFLHFKARVLELRTGKGGKKLDKYLPADDYFQKGLYMFDIGQNDIAGAFYSKTLDQ 120

Query: 121 ILASIPAILSEFESGVQVRLNGFFLSYLGLMMILFR 157
           ILASIPAILSEFESGVQVRLNGFFLSYLGLMMILFR
Sbjct: 121 ILASIPAILSEFESGVQVRLNGFFLSYLGLMMILFR 156

[Close]

BLAST of Carg17560 vs. NCBI nr
Match: XP_023537769.1 (GDSL esterase/lipase At1g54790-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 279.6 bits (714), Expect = 6.3e-72
Identity = 137/141 (97.16%), Postives = 138/141 (97.87%), Query Frame = 0


Query: 16  MDMPYLNANLDSLGAPNFCKRCNYAAVGSTILPATATSFCPFSFGVQVNQFLHFKARVLE 75
           MDMPYLNANLDSLGAPNFCKRCNYAAVGSTILPATATSFCPFSFGVQVNQFLHFKARVLE
Sbjct: 1   MDMPYLNANLDSLGAPNFCKRCNYAAVGSTILPATATSFCPFSFGVQVNQFLHFKARVLE 60

Query: 76  LRTGKGGKKLGKYLPADDYFQKGLYMFDIGQNDIAGAFYSKTLDQILASIPAILSEFESG 135
           LR GKGGKKL KYLPADDYFQKGLYMFDIGQND+AGAFYSKTLDQILASIPAILSEFESG
Sbjct: 61  LRAGKGGKKLDKYLPADDYFQKGLYMFDIGQNDLAGAFYSKTLDQILASIPAILSEFESG 120

Query: 136 VQVRLNGFFLSYLGLMMILFR 157
           VQVRLNGFFLSYLG MMILFR
Sbjct: 121 VQVRLNGFFLSYLGSMMILFR 141

[Close]

BLAST of Carg17560 vs. NCBI nr
Match: XP_022937636.1 (GDSL esterase/lipase At1g54790-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 265.0 bits (676), Expect = 1.6e-67
Identity = 131/137 (95.62%), Postives = 131/137 (95.62%), Query Frame = 0


Query: 1   MLRFSSVCNVFAVDAMDMPYLNANLDSLGAPNFCKRCNYAAVGSTILPATATSFCPFSFG 60
           MLRFS VCNVFAVDAMDMPYLNANLDSL APNF K CNYAA GSTILPATATSFCPFSFG
Sbjct: 1   MLRFSLVCNVFAVDAMDMPYLNANLDSLDAPNFRKGCNYAAAGSTILPATATSFCPFSFG 60

Query: 61  VQVNQFLHFKARVLELRTGKGGKKLGKYLPADDYFQKGLYMFDIGQNDIAGAFYSKTLDQ 120
           VQVNQFLHFKARVLELRTGKGGKKL KYLPADDYFQKGLYMFDIGQNDIAGAFYSKTLDQ
Sbjct: 61  VQVNQFLHFKARVLELRTGKGGKKLDKYLPADDYFQKGLYMFDIGQNDIAGAFYSKTLDQ 120

Query: 121 ILASIPAILSEFESGVQ 138
           ILASIPAILSEFESGVQ
Sbjct: 121 ILASIPAILSEFESGVQ 137

[Close]

BLAST of Carg17560 vs. NCBI nr
Match: XP_022937640.1 (GDSL esterase/lipase At1g54790-like isoform X5 [Cucurbita moschata])

HSP 1 Score: 265.0 bits (676), Expect = 1.6e-67
Identity = 131/137 (95.62%), Postives = 131/137 (95.62%), Query Frame = 0


Query: 1   MLRFSSVCNVFAVDAMDMPYLNANLDSLGAPNFCKRCNYAAVGSTILPATATSFCPFSFG 60
           MLRFS VCNVFAVDAMDMPYLNANLDSL APNF K CNYAA GSTILPATATSFCPFSFG
Sbjct: 1   MLRFSLVCNVFAVDAMDMPYLNANLDSLDAPNFRKGCNYAAAGSTILPATATSFCPFSFG 60

Query: 61  VQVNQFLHFKARVLELRTGKGGKKLGKYLPADDYFQKGLYMFDIGQNDIAGAFYSKTLDQ 120
           VQVNQFLHFKARVLELRTGKGGKKL KYLPADDYFQKGLYMFDIGQNDIAGAFYSKTLDQ
Sbjct: 61  VQVNQFLHFKARVLELRTGKGGKKLDKYLPADDYFQKGLYMFDIGQNDIAGAFYSKTLDQ 120

Query: 121 ILASIPAILSEFESGVQ 138
           ILASIPAILSEFESGVQ
Sbjct: 121 ILASIPAILSEFESGVQ 137

[Close]

BLAST of Carg17560 vs. NCBI nr
Match: XP_022937639.1 (GDSL esterase/lipase At1g54790-like isoform X4 [Cucurbita moschata])

HSP 1 Score: 265.0 bits (676), Expect = 1.6e-67
Identity = 131/137 (95.62%), Postives = 131/137 (95.62%), Query Frame = 0


Query: 1   MLRFSSVCNVFAVDAMDMPYLNANLDSLGAPNFCKRCNYAAVGSTILPATATSFCPFSFG 60
           MLRFS VCNVFAVDAMDMPYLNANLDSL APNF K CNYAA GSTILPATATSFCPFSFG
Sbjct: 1   MLRFSLVCNVFAVDAMDMPYLNANLDSLDAPNFRKGCNYAAAGSTILPATATSFCPFSFG 60

Query: 61  VQVNQFLHFKARVLELRTGKGGKKLGKYLPADDYFQKGLYMFDIGQNDIAGAFYSKTLDQ 120
           VQVNQFLHFKARVLELRTGKGGKKL KYLPADDYFQKGLYMFDIGQNDIAGAFYSKTLDQ
Sbjct: 61  VQVNQFLHFKARVLELRTGKGGKKLDKYLPADDYFQKGLYMFDIGQNDIAGAFYSKTLDQ 120

Query: 121 ILASIPAILSEFESGVQ 138
           ILASIPAILSEFESGVQ
Sbjct: 121 ILASIPAILSEFESGVQ 137

[Close]

BLAST of Carg17560 vs. TAIR10
Match: AT1G54790.2 (GDSL-like Lipase/Acylhydrolase superfamily protein)

HSP 1 Score: 172.6 bits (436), Expect = 2.0e-43
Identity = 83/127 (65.35%), Postives = 100/127 (78.74%), Query Frame = 0


Query: 11  FAVDAMDMPYLNANLDSLGAPNFCKRCNYAAVGSTILPATATSFCPFSFGVQVNQFLHFK 70
           F +D MD+P+LN  LDSLG PNF K CN+AA GSTILPA  TS  PFSF +Q++QF+ FK
Sbjct: 78  FLMDEMDLPFLNPYLDSLGLPNFKKGCNFAAAGSTILPANPTSVSPFSFDLQISQFIRFK 137

Query: 71  ARVLELRTGKGGKKLGKYLPADDYFQKGLYMFDIGQNDIAGAFYSKTLDQILASIPAILS 130
           +R +EL   K G+K  KYLP  DY+ KGLYM DIGQNDIAGAFYSKTLDQ+LASIP+IL 
Sbjct: 138 SRAIEL-LSKTGRKYEKYLPPIDYYSKGLYMIDIGQNDIAGAFYSKTLDQVLASIPSILE 197

Query: 131 EFESGVQ 138
            FE+G++
Sbjct: 198 TFEAGLK 203

[Close]

BLAST of Carg17560 vs. TAIR10
Match: AT3G05180.1 (GDSL-like Lipase/Acylhydrolase superfamily protein)

HSP 1 Score: 139.8 bits (351), Expect = 1.4e-33
Identity = 66/127 (51.97%), Postives = 93/127 (73.23%), Query Frame = 0


Query: 11  FAVDAMDMPYLNANLDSLGAPNFCKRCNYAAVGSTILPATATSFCPFSFGVQVNQFLHFK 70
           F ++A+D PYL   LDS+    + + CN+AA  STI  A A S+ PF FGVQV+QF+ FK
Sbjct: 84  FLMEAIDRPYLRPYLDSISRQTYRRGCNFAAAASTIQKANAASYSPFGFGVQVSQFITFK 143

Query: 71  ARVLELRTGKGGKKLGKYLPADDYFQKGLYMFDIGQNDIAGAFYSKTLDQILASIPAILS 130
           ++VL+L   +  ++L +YLP++ +F  GLYMFDIGQNDIAGAFY+KT+DQ+LA +P IL 
Sbjct: 144 SKVLQLI--QQDEELQRYLPSEYFFSNGLYMFDIGQNDIAGAFYTKTVDQVLALVPIILD 203

Query: 131 EFESGVQ 138
            F+ G++
Sbjct: 204 IFQDGIK 208

[Close]

BLAST of Carg17560 vs. TAIR10
Match: AT1G67830.1 (alpha-fucosidase 1)

HSP 1 Score: 91.7 bits (226), Expect = 4.4e-19
Identity = 54/132 (40.91%), Postives = 77/132 (58.33%), Query Frame = 0


Query: 11  FAVDAMDMPYLNANLDSLGAPNFCKRCNYAAVGSTILPATAT----SFCPFSFGVQVNQF 70
           F  +++ +PYL+A LDS+G+ NF    N+A  GS I    +T     F PFS  VQ  QF
Sbjct: 76  FIAESLGLPYLSAFLDSVGS-NFSHGANFATAGSPIRALNSTLRQSGFSPFSLDVQFVQF 135

Query: 71  LHFKARVLELRTGKGGKKLGKYLPADDYFQKGLYMFDIGQNDI-AGAFYSKTLDQILASI 130
            +F  R   +R+  G  K    LP  D F K LY FDIGQND+ AG F +KT++Q+   +
Sbjct: 136 YNFHNRSQTVRSRGGVYK--TMLPESDSFSKALYTFDIGQNDLTAGYFANKTVEQVETEV 195

Query: 131 PAILSEFESGVQ 138
           P I+S+F + ++
Sbjct: 196 PEIISQFMNAIK 204

[Close]

BLAST of Carg17560 vs. TAIR10
Match: AT5G14450.1 (GDSL-like Lipase/Acylhydrolase superfamily protein)

HSP 1 Score: 87.4 bits (215), Expect = 8.3e-18
Identity = 53/131 (40.46%), Postives = 75/131 (57.25%), Query Frame = 0


Query: 11  FAVDAMDMPYLNANLDSLGAPNFCKRCNYAAVGSTILPATATSF----CPFSFGVQVNQF 70
           F  + + +PYL+A L+SLG+ NF    N+A  GSTI     T F     PFS  +Q+ QF
Sbjct: 87  FIAERLGLPYLSAYLNSLGS-NFRHGANFATGGSTIRRQNETIFQYGISPFSLDMQIAQF 146

Query: 71  LHFKARVLELRTGKGGKKLGKYLPADDYFQKGLYMFDIGQNDIAGAFYSKTLDQILASIP 130
             FKAR   L T    +   + LP  + F K LY FDIGQND++  F + ++DQ+ A+IP
Sbjct: 147 DQFKARSALLFTQIKSRYDREKLPRQEEFAKALYTFDIGQNDLSVGFRTMSVDQLKATIP 206

Query: 131 AILSEFESGVQ 138
            I++   S V+
Sbjct: 207 DIVNHLASAVR 216

[Close]

BLAST of Carg17560 vs. TAIR10
Match: AT3G27950.1 (GDSL-like Lipase/Acylhydrolase superfamily protein)

HSP 1 Score: 86.7 bits (213), Expect = 1.4e-17
Identity = 52/122 (42.62%), Postives = 67/122 (54.92%), Query Frame = 0


Query: 11  FAVDAMDMPYLNANLDSLGAPNFCKRCNYAAVGSTILPATATSFCPFSFGVQVNQFLHFK 70
           F  + + +PYL   LDS+GA N+    N+A  GS I P T   F PF  G QV+QF+HFK
Sbjct: 78  FITENLTLPYLTPYLDSVGA-NYRHGANFATGGSCIRP-TLACFSPFHLGTQVSQFIHFK 137

Query: 71  ARVLELRTGKGGKKLGKYLPADDYFQKGLYMFDIGQNDIAGAFYSKTLDQILASIPAILS 130
            R L L           Y   +D F K LY  DIGQND+A  F + T +Q+ A+IP I+ 
Sbjct: 138 TRTLSL-----------YNQTND-FSKALYTLDIGQNDLAIGFQNMTEEQLKATIPLIIE 185

Query: 131 EF 133
            F
Sbjct: 198 NF 185

[Close]

BLAST of Carg17560 vs. Swiss-Prot
Match: sp|Q3ECP6|GDL22_ARATH (GDSL esterase/lipase At1g54790 OS=Arabidopsis thaliana OX=3702 GN=At1g54790 PE=2 SV=1)

HSP 1 Score: 172.6 bits (436), Expect = 3.6e-42
Identity = 83/127 (65.35%), Postives = 100/127 (78.74%), Query Frame = 0


Query: 11  FAVDAMDMPYLNANLDSLGAPNFCKRCNYAAVGSTILPATATSFCPFSFGVQVNQFLHFK 70
           F +D MD+P+LN  LDSLG PNF K CN+AA GSTILPA  TS  PFSF +Q++QF+ FK
Sbjct: 78  FLMDEMDLPFLNPYLDSLGLPNFKKGCNFAAAGSTILPANPTSVSPFSFDLQISQFIRFK 137

Query: 71  ARVLELRTGKGGKKLGKYLPADDYFQKGLYMFDIGQNDIAGAFYSKTLDQILASIPAILS 130
           +R +EL   K G+K  KYLP  DY+ KGLYM DIGQNDIAGAFYSKTLDQ+LASIP+IL 
Sbjct: 138 SRAIEL-LSKTGRKYEKYLPPIDYYSKGLYMIDIGQNDIAGAFYSKTLDQVLASIPSILE 197

Query: 131 EFESGVQ 138
            FE+G++
Sbjct: 198 TFEAGLK 203

[Close]

BLAST of Carg17560 vs. Swiss-Prot
Match: sp|Q9MAA1|GDL49_ARATH (GDSL esterase/lipase At3g05180 OS=Arabidopsis thaliana OX=3702 GN=At3g05180 PE=2 SV=1)

HSP 1 Score: 139.8 bits (351), Expect = 2.6e-32
Identity = 66/127 (51.97%), Postives = 93/127 (73.23%), Query Frame = 0


Query: 11  FAVDAMDMPYLNANLDSLGAPNFCKRCNYAAVGSTILPATATSFCPFSFGVQVNQFLHFK 70
           F ++A+D PYL   LDS+    + + CN+AA  STI  A A S+ PF FGVQV+QF+ FK
Sbjct: 84  FLMEAIDRPYLRPYLDSISRQTYRRGCNFAAAASTIQKANAASYSPFGFGVQVSQFITFK 143

Query: 71  ARVLELRTGKGGKKLGKYLPADDYFQKGLYMFDIGQNDIAGAFYSKTLDQILASIPAILS 130
           ++VL+L   +  ++L +YLP++ +F  GLYMFDIGQNDIAGAFY+KT+DQ+LA +P IL 
Sbjct: 144 SKVLQLI--QQDEELQRYLPSEYFFSNGLYMFDIGQNDIAGAFYTKTVDQVLALVPIILD 203

Query: 131 EFESGVQ 138
            F+ G++
Sbjct: 204 IFQDGIK 208

[Close]

BLAST of Carg17560 vs. Swiss-Prot
Match: sp|Q9LII9|GDL54_ARATH (GDSL esterase/lipase At3g27950 OS=Arabidopsis thaliana OX=3702 GN=At3g27950 PE=2 SV=1)

HSP 1 Score: 94.4 bits (233), Expect = 1.2e-18
Identity = 54/122 (44.26%), Postives = 69/122 (56.56%), Query Frame = 0


Query: 11  FAVDAMDMPYLNANLDSLGAPNFCKRCNYAAVGSTILPATATSFCPFSFGVQVNQFLHFK 70
           F  + + +PYL   LDS+GA N+    N+A  GS I P T   F PF  G QV+QF+HFK
Sbjct: 78  FITENLTLPYLTPYLDSVGA-NYRHGANFATGGSCIRP-TLACFSPFHLGTQVSQFIHFK 137

Query: 71  ARVLELRTGKGGKKLGKYLPADDYFQKGLYMFDIGQNDIAGAFYSKTLDQILASIPAILS 130
            R L L     GK     L   +YF K LY  DIGQND+A  F + T +Q+ A+IP I+ 
Sbjct: 138 TRTLSLYNQTNGK--FNRLSHTNYFSKALYTLDIGQNDLAIGFQNMTEEQLKATIPLIIE 195

Query: 131 EF 133
            F
Sbjct: 198 NF 195

[Close]

BLAST of Carg17560 vs. Swiss-Prot
Match: sp|Q9FXE5|FUCO3_ARATH (Alpha-L-fucosidase 3 OS=Arabidopsis thaliana OX=3702 GN=FXG1 PE=2 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 8.0e-18
Identity = 54/132 (40.91%), Postives = 77/132 (58.33%), Query Frame = 0


Query: 11  FAVDAMDMPYLNANLDSLGAPNFCKRCNYAAVGSTILPATAT----SFCPFSFGVQVNQF 70
           F  +++ +PYL+A LDS+G+ NF    N+A  GS I    +T     F PFS  VQ  QF
Sbjct: 76  FIAESLGLPYLSAFLDSVGS-NFSHGANFATAGSPIRALNSTLRQSGFSPFSLDVQFVQF 135

Query: 71  LHFKARVLELRTGKGGKKLGKYLPADDYFQKGLYMFDIGQNDI-AGAFYSKTLDQILASI 130
            +F  R   +R+  G  K    LP  D F K LY FDIGQND+ AG F +KT++Q+   +
Sbjct: 136 YNFHNRSQTVRSRGGVYK--TMLPESDSFSKALYTFDIGQNDLTAGYFANKTVEQVETEV 195

Query: 131 PAILSEFESGVQ 138
           P I+S+F + ++
Sbjct: 196 PEIISQFMNAIK 204

[Close]

BLAST of Carg17560 vs. Swiss-Prot
Match: sp|Q9LY84|GDL76_ARATH (GDSL esterase/lipase At5g14450 OS=Arabidopsis thaliana OX=3702 GN=At5g14450 PE=2 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 1.5e-16
Identity = 53/131 (40.46%), Postives = 75/131 (57.25%), Query Frame = 0


Query: 11  FAVDAMDMPYLNANLDSLGAPNFCKRCNYAAVGSTILPATATSF----CPFSFGVQVNQF 70
           F  + + +PYL+A L+SLG+ NF    N+A  GSTI     T F     PFS  +Q+ QF
Sbjct: 87  FIAERLGLPYLSAYLNSLGS-NFRHGANFATGGSTIRRQNETIFQYGISPFSLDMQIAQF 146

Query: 71  LHFKARVLELRTGKGGKKLGKYLPADDYFQKGLYMFDIGQNDIAGAFYSKTLDQILASIP 130
             FKAR   L T    +   + LP  + F K LY FDIGQND++  F + ++DQ+ A+IP
Sbjct: 147 DQFKARSALLFTQIKSRYDREKLPRQEEFAKALYTFDIGQNDLSVGFRTMSVDQLKATIP 206

Query: 131 AILSEFESGVQ 138
            I++   S V+
Sbjct: 207 DIVNHLASAVR 216

[Close]

BLAST of Carg17560 vs. TrEMBL
Match: tr|A0A1S3BZK6|A0A1S3BZK6_CUCME (GDSL esterase/lipase At1g54790-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103495321 PE=3 SV=1)

HSP 1 Score: 227.6 bits (579), Expect = 1.9e-56
Identity = 110/127 (86.61%), Postives = 117/127 (92.13%), Query Frame = 0


Query: 11  FAVDAMDMPYLNANLDSLGAPNFCKRCNYAAVGSTILPATATSFCPFSFGVQVNQFLHFK 70
           F +DAMDMP+LNA LDS+GAPNF K CNYAA GST+LPATATS  PFSFGVQVNQFLHFK
Sbjct: 80  FIMDAMDMPFLNAYLDSIGAPNFRKGCNYAAAGSTVLPATATSVSPFSFGVQVNQFLHFK 139

Query: 71  ARVLELRTGKGGKKLGKYLPADDYFQKGLYMFDIGQNDIAGAFYSKTLDQILASIPAILS 130
           ARVLELR GKGGKKL KYLPA+DYFQKGLYMFDIGQND+AGAFYSKTLDQILASIP IL+
Sbjct: 140 ARVLELREGKGGKKLDKYLPAEDYFQKGLYMFDIGQNDLAGAFYSKTLDQILASIPTILA 199

Query: 131 EFESGVQ 138
           EFESGVQ
Sbjct: 200 EFESGVQ 206

[Close]

BLAST of Carg17560 vs. TrEMBL
Match: tr|A0A1S3C007|A0A1S3C007_CUCME (GDSL esterase/lipase At1g54790-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103495321 PE=3 SV=1)

HSP 1 Score: 227.6 bits (579), Expect = 1.9e-56
Identity = 110/127 (86.61%), Postives = 117/127 (92.13%), Query Frame = 0


Query: 11  FAVDAMDMPYLNANLDSLGAPNFCKRCNYAAVGSTILPATATSFCPFSFGVQVNQFLHFK 70
           F +DAMDMP+LNA LDS+GAPNF K CNYAA GST+LPATATS  PFSFGVQVNQFLHFK
Sbjct: 74  FLLDAMDMPFLNAYLDSIGAPNFRKGCNYAAAGSTVLPATATSVSPFSFGVQVNQFLHFK 133

Query: 71  ARVLELRTGKGGKKLGKYLPADDYFQKGLYMFDIGQNDIAGAFYSKTLDQILASIPAILS 130
           ARVLELR GKGGKKL KYLPA+DYFQKGLYMFDIGQND+AGAFYSKTLDQILASIP IL+
Sbjct: 134 ARVLELREGKGGKKLDKYLPAEDYFQKGLYMFDIGQNDLAGAFYSKTLDQILASIPTILA 193

Query: 131 EFESGVQ 138
           EFESGVQ
Sbjct: 194 EFESGVQ 200

[Close]

BLAST of Carg17560 vs. TrEMBL
Match: tr|A0A0A0LGA7|A0A0A0LGA7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G020960 PE=3 SV=1)

HSP 1 Score: 226.9 bits (577), Expect = 3.2e-56
Identity = 110/127 (86.61%), Postives = 117/127 (92.13%), Query Frame = 0


Query: 11  FAVDAMDMPYLNANLDSLGAPNFCKRCNYAAVGSTILPATATSFCPFSFGVQVNQFLHFK 70
           F +DAMDMP+LNA LDSLGAPNF K CNYAA GST+LPATATS  PFSFGVQVNQFLHFK
Sbjct: 74  FLLDAMDMPFLNAYLDSLGAPNFRKGCNYAAAGSTVLPATATSVSPFSFGVQVNQFLHFK 133

Query: 71  ARVLELRTGKGGKKLGKYLPADDYFQKGLYMFDIGQNDIAGAFYSKTLDQILASIPAILS 130
           ARVLELR GKGGKKL KYLPA++YFQKGLYMFDIGQND+AGAFYSKTLDQILASIP IL+
Sbjct: 134 ARVLELREGKGGKKLDKYLPAEEYFQKGLYMFDIGQNDLAGAFYSKTLDQILASIPTILA 193

Query: 131 EFESGVQ 138
           EFESGVQ
Sbjct: 194 EFESGVQ 200

[Close]

BLAST of Carg17560 vs. TrEMBL
Match: tr|A0A0A0LIJ5|A0A0A0LIJ5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G020920 PE=3 SV=1)

HSP 1 Score: 202.2 bits (513), Expect = 8.5e-49
Identity = 100/127 (78.74%), Postives = 110/127 (86.61%), Query Frame = 0


Query: 11  FAVDAMDMPYLNANLDSLGAPNFCKRCNYAAVGSTILPATATSFCPFSFGVQVNQFLHFK 70
           F +DAMDMPYLN  LDSLGAPNF K CNYAA  ST+LPAT TSF PFSFGVQVNQF+HFK
Sbjct: 76  FLLDAMDMPYLNPYLDSLGAPNFRKGCNYAAAASTVLPATPTSFSPFSFGVQVNQFIHFK 135

Query: 71  ARVLELRTGKGGKKLGKYLPADDYFQKGLYMFDIGQNDIAGAFYSKTLDQILASIPAILS 130
           ARVLELR+   GKKL KYLP +DYF+KGLYMFDIGQND+A AFYSKTLDQILASIP IL+
Sbjct: 136 ARVLELRS--KGKKLDKYLPDEDYFEKGLYMFDIGQNDLAIAFYSKTLDQILASIPTILA 195

Query: 131 EFESGVQ 138
            FE+G+Q
Sbjct: 196 VFETGLQ 200

[Close]

BLAST of Carg17560 vs. TrEMBL
Match: tr|A0A072UFG3|A0A072UFG3_MEDTR (GDSL-like lipase/acylhydrolase OS=Medicago truncatula OX=3880 GN=11420850 PE=3 SV=1)

HSP 1 Score: 199.1 bits (505), Expect = 7.2e-48
Identity = 94/128 (73.44%), Postives = 113/128 (88.28%), Query Frame = 0


Query: 10  VFAVDAMDMPYLNANLDSLGAPNFCKRCNYAAVGSTILPATATSFCPFSFGVQVNQFLHF 69
           +F+VDA+D+P+LNA LDSLG PNF K CN+AA GSTILPATA+S CPFSFG+QV+QFL F
Sbjct: 7   LFSVDALDLPFLNAYLDSLGLPNFRKGCNFAAAGSTILPATASSICPFSFGIQVSQFLKF 66

Query: 70  KARVLELRTGKGGKKLGKYLPADDYFQKGLYMFDIGQNDIAGAFYSKTLDQILASIPAIL 129
           KAR LEL +GK G+K  KY+P++D F+KGLYMFDIGQND+AGAFYSKTLDQ+LASIP IL
Sbjct: 67  KARALELLSGK-GRKFDKYVPSEDIFEKGLYMFDIGQNDLAGAFYSKTLDQVLASIPTIL 126

Query: 130 SEFESGVQ 138
            EFESG++
Sbjct: 127 LEFESGIK 133

The following BLAST results are available for this feature:

BLAST of Carg17560 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022937635.1	5.9e-78	96.15	GDSL esterase/lipase At1g54790-like isoform X1 [Cucurbita moschata]	[more]
XP_023537769.1	6.3e-72	97.16	GDSL esterase/lipase At1g54790-like [Cucurbita pepo subsp. pepo]	[more]
XP_022937636.1	1.6e-67	95.62	GDSL esterase/lipase At1g54790-like isoform X2 [Cucurbita moschata]	[more]
XP_022937640.1	1.6e-67	95.62	GDSL esterase/lipase At1g54790-like isoform X5 [Cucurbita moschata]	[more]
XP_022937639.1	1.6e-67	95.62	GDSL esterase/lipase At1g54790-like isoform X4 [Cucurbita moschata]	[more]

BLAST of Carg17560 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G54790.2	2.0e-43	65.35	GDSL-like Lipase/Acylhydrolase superfamily protein	[more]
AT3G05180.1	1.4e-33	51.97	GDSL-like Lipase/Acylhydrolase superfamily protein	[more]
AT1G67830.1	4.4e-19	40.91	alpha-fucosidase 1	[more]
AT5G14450.1	8.3e-18	40.46	GDSL-like Lipase/Acylhydrolase superfamily protein	[more]
AT3G27950.1	1.4e-17	42.62	GDSL-like Lipase/Acylhydrolase superfamily protein	[more]

BLAST of Carg17560 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q3ECP6\|GDL22_ARATH	3.6e-42	65.35	GDSL esterase/lipase At1g54790 OS=Arabidopsis thaliana OX=3702 GN=At1g54790 PE=2...	[more]
sp\|Q9MAA1\|GDL49_ARATH	2.6e-32	51.97	GDSL esterase/lipase At3g05180 OS=Arabidopsis thaliana OX=3702 GN=At3g05180 PE=2...	[more]
sp\|Q9LII9\|GDL54_ARATH	1.2e-18	44.26	GDSL esterase/lipase At3g27950 OS=Arabidopsis thaliana OX=3702 GN=At3g27950 PE=2...	[more]
sp\|Q9FXE5\|FUCO3_ARATH	8.0e-18	40.91	Alpha-L-fucosidase 3 OS=Arabidopsis thaliana OX=3702 GN=FXG1 PE=2 SV=1	[more]
sp\|Q9LY84\|GDL76_ARATH	1.5e-16	40.46	GDSL esterase/lipase At5g14450 OS=Arabidopsis thaliana OX=3702 GN=At5g14450 PE=2...	[more]

BLAST of Carg17560 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3BZK6\|A0A1S3BZK6_CUCME	1.9e-56	86.61	GDSL esterase/lipase At1g54790-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103...	[more]
tr\|A0A1S3C007\|A0A1S3C007_CUCME	1.9e-56	86.61	GDSL esterase/lipase At1g54790-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103...	[more]
tr\|A0A0A0LGA7\|A0A0A0LGA7_CUCSA	3.2e-56	86.61	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G020960 PE=3 SV=1	[more]
tr\|A0A0A0LIJ5\|A0A0A0LIJ5_CUCSA	8.5e-49	78.74	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G020920 PE=3 SV=1	[more]
tr\|A0A072UFG3\|A0A072UFG3_MEDTR	7.2e-48	73.44	GDSL-like lipase/acylhydrolase OS=Medicago truncatula OX=3880 GN=11420850 PE=3 S...	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg17560-RA	Carg17560-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR22835	ZINC FINGER FYVE DOMAIN CONTAINING PROTEIN	coord: 11..137
None	No IPR available	PANTHER	PTHR22835:SF458	SUBFAMILY NOT NAMED	coord: 11..137

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg17560	CmoCh12G011030	Cucurbita moschata (Rifu)	carcmoB0973
Carg17560	Cp4.1LG07g09100	Cucurbita pepo (Zucchini)	carcpeB1006
Carg17560	Cla97C02G041810	Watermelon (97103) v2	carwmbB0746

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg17560	Carg12884	Silver-seed gourd	carcarB587

The following block(s) are covering this gene:


Gene	Organism	Block
Carg17560	Cucumber (Gy14) v2	carcgybB0713
Carg17560	Cucumber (Gy14) v1	carcgyB0803
Carg17560	Cucurbita maxima (Rimu)	carcmaB1000
Carg17560	Cucurbita maxima (Rimu)	carcmaB1001
Carg17560	Cucurbita moschata (Rifu)	carcmoB0974
Carg17560	Cucurbita pepo (Zucchini)	carcpeB1005
Carg17560	Wild cucumber (PI 183967)	carcpiB0751
Carg17560	Cucumber (Chinese Long) v2	carcuB0735
Carg17560	Cucumber (Chinese Long) v3	carcucB0754
Carg17560	Bottle gourd (USVL1VR-Ls)	carlsiB654
Carg17560	Melon (DHL92) v3.5.1	carmeB0711
Carg17560	Melon (DHL92) v3.6.1	carmedB0724
Carg17560	Watermelon (Charleston Gray)	carwcgB0692
Carg17560	Watermelon (97103) v1	carwmB0714