CmoCh12G010950 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh12G010950
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Glycoprotein membrane GPI-anchored protein
Location	Cmo_Chr12 : 10019341 .. 10021004 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexonthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCTTGCTCTCCCACAAACTTGGCTTCTTCCTCTACATTGTTGCCCATGGCTTGCTGCTATTGTCGTGCTCAGTACATGGCGATGGACCTAATGGTTTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTAAAGACACACACACAAACATATATGAGCTTCATAGTTCCTTGTCTTTGATGGTTCTTTCCTGTTGAGCTGTTTTACTGATAATTCCCCATTATCCATAGACATCATTTGTTATGGTTGAGGATTATTGGGAGTGAGTCCCACATTGGCTAATTTAGGGAATGATCATGGGTTTATAAGTGAGGAATACTATCTCCATTGGTATGAGGCCTTTTGGGGAAGCCCAAAGCAAAGCCATGAGAGCTTATGCTCAAAGTGGACAATATCGTACCAGTGTGGAGAGTCGTGATTCCTAACATGGTATCAGAGTCATGCCCTAAAACTTAGCTATGTTAATAGAATCCTCAAATATCGAACAAAGAATTGTGAGTCTCGAAGGTGTAGTCAAAAGTGACTAAAAGTGTCGAACAAAGGGTATACTTTGTTCGAGGGTTCCAGAGAAAGGAGTTAAGCCTCGATTAAGGGGAGACTGTTCGAGGGCTCCATAGGCCTTAGGGGAGGCTCTATAGTGTACTTTGTTCGAGTAGAGGATTGTTGGTTAATTTAGGGAATGATCATGGGTTTACGAGTAAGGTTCTCCATTGATATGAAGTCTTTTGGGAAGCCTAAAAGCAAAGCAACGAGAGCTTATGCTCAAAGTGGACAATATCATACCATCGTGGAGAGTCGTGATTCCTAACACATAGCTCCTTGTCTTTGATGGTCTTTGATGGGTTCTTTCCTGTTGAACTGTTTTACTTGTAATTCCCCATTAGCCATAGACATCATTTGCTATATGCTATCTATCTCATAGAAACTCACACCTAAATCATCCATCATTTGCAGTGAAAGAAGACGTGCTTTTCCAAGCCATGAACAGCTATAGAAAGTCCATAAAACTTACCCCCATGAACAAGAACTCCAAAGCAGGCTGCCTAGTCAAGCAAATCGCTTGGGACTTCGACGACCAGTCGCCCCTCAGCATCTTCCTCAGCGGCTCCACCATTGCACCAAGCAACTTCTCCCAACTCCCTAGTCTACCCGACTACCTGTCCAAATGCAAAATCGAGCTCAATCACACAAAAAATGGCCTGATTTTGCCTCTCCATATCCCCACTTTGGCATTGAATCTTGTTCTCCATGAATGTACAAATTCCCAAATGGCTAAGTACTGGAGCAAACCTGAATTCACGTCGGTCGGAATTGGGTGTTTTGAACAATGGGTAGTGTTCGCTTTTGCCACCGATTCGCCTACCGGAAGCTTTTCTTCTGCCGTGAATTTGTCTGATTTGGGTCTTCGACATTTTTACTTGGTGTTATCCGTGCTGTTGGGGTTGCTTCTTCTCTCGGGTTGAGGACCGTTTTCCTTTCCATCTCAAACGACATGTCGGTCGGGTTCTGGAAATTTCAAGCATCCTGCCACAATAATTACATTCTTTTTTTCTTTATTTTGTGTTCGTTTTTACAAGTGTTTTTCATCGAATTGTTATCTTAAATTCTTATCTTAAGGAGGAAAAAAAGAGTTTTTCTAAAGCCG

mRNA sequence

ATGGCCTTGCTCTCCCACAAACTTGGCTTCTTCCTCTACATTGTTGCCCATGGCTTGCTGCTATTGTCGTGCTCAGTACATGGCGATGGACCTAATGTGAAAGAAGACGTGCTTTTCCAAGCCATGAACAGCTATAGAAAGTCCATAAAACTTACCCCCATGAACAAGAACTCCAAAGCAGGCTGCCTAGTCAAGCAAATCGCTTGGGACTTCGACGACCAGTCGCCCCTCAGCATCTTCCTCAGCGGCTCCACCATTGCACCAAGCAACTTCTCCCAACTCCCTAGTCTACCCGACTACCTGTCCAAATGCAAAATCGAGCTCAATCACACAAAAAATGGCCTGATTTTGCCTCTCCATATCCCCACTTTGGCATTGAATCTTGTTCTCCATGAATGTACAAATTCCCAAATGGCTAAGTACTGGAGCAAACCTGAATTCACGTCGGTCGGAATTGGGTGTTTTGAACAATGGGTAGTGTTCGCTTTTGCCACCGATTCGCCTACCGGAAGCTTTTCTTCTGCCGTGAATTTGTCTGATTTGGGTCTTCGACATTTTTACTTGGTGTTATCCGTGCTGTTGGGGTTGCTTCTTCTCTCGGGTTGAGGACCGTTTTCCTTTCCATCTCAAACGACATGTCGGTCGGGTTCTGGAAATTTCAAGCATCCTGCCACAATAATTACATTCTTTTTTTCTTTATTTTGTGTTCGTTTTTACAAGTGTTTTTCATCGAATTGTTATCTTAAATTCTTATCTTAAGGAGGAAAAAAAGAGTTTTTCTAAAGCCG

Coding sequence (CDS)

ATGGCCTTGCTCTCCCACAAACTTGGCTTCTTCCTCTACATTGTTGCCCATGGCTTGCTGCTATTGTCGTGCTCAGTACATGGCGATGGACCTAATGTGAAAGAAGACGTGCTTTTCCAAGCCATGAACAGCTATAGAAAGTCCATAAAACTTACCCCCATGAACAAGAACTCCAAAGCAGGCTGCCTAGTCAAGCAAATCGCTTGGGACTTCGACGACCAGTCGCCCCTCAGCATCTTCCTCAGCGGCTCCACCATTGCACCAAGCAACTTCTCCCAACTCCCTAGTCTACCCGACTACCTGTCCAAATGCAAAATCGAGCTCAATCACACAAAAAATGGCCTGATTTTGCCTCTCCATATCCCCACTTTGGCATTGAATCTTGTTCTCCATGAATGTACAAATTCCCAAATGGCTAAGTACTGGAGCAAACCTGAATTCACGTCGGTCGGAATTGGGTGTTTTGAACAATGGGTAGTGTTCGCTTTTGCCACCGATTCGCCTACCGGAAGCTTTTCTTCTGCCGTGAATTTGTCTGATTTGGGTCTTCGACATTTTTACTTGGTGTTATCCGTGCTGTTGGGGTTGCTTCTTCTCTCGGGTTGA

Homology

[Close]

BLAST of CmoCh12G010950 vs. Swiss-Prot
Match: UGPI3_ARATH (Uncharacterized GPI-anchored protein At5g19250 OS=Arabidopsis thaliana GN=At5g19250 PE=1 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 1.5e-21
Identity = 63/164 (38.41%), Postives = 88/164 (53.66%), Query Frame = 1


Query: 34  KEDVLFQAMNSYRKSIKLTPMNKNSKAGCLVKQIAWDFDDQSPLSIFLSGSTIAPSNFSQ 93
           +EDVL   +NSYR S+ LT +  N  A CL  +IA  F +Q   +   +GS   P     
Sbjct: 29  EEDVLLTGINSYRASLNLTTLIHNHNAECLADEIADQFKNQPCTNT--TGSASVPGTTPG 88

Query: 94  LPSLPDYLSKCKIELNHTKNGLILPLHIPTLALNLVLHECTNSQMAKYWSKPEFTSVGIG 153
            P+LP+ LSKC++    T++G ILP  +P L  +LVL   T SQ +K  +  +FT +GIG
Sbjct: 89  FPNLPNLLSKCRLNPTVTRDGAILPACVPNLDPSLVLTNFTMSQYSKDLNDSKFTGIGIG 148

Query: 154 CFEQWVVFAFATDSPTGSFSSAVNLSDLGLRHFYLVLSVLLGLL 198
             + W+V    T +P GS+S A N          LV S L+ LL
Sbjct: 149 SDDNWIVVVLTTSTPEGSYSPASNSGAFAFGVNGLVSSSLMFLL 190

[Close]

BLAST of CmoCh12G010950 vs. Swiss-Prot
Match: UGPI4_ARATH (Uncharacterized GPI-anchored protein At3g06035 OS=Arabidopsis thaliana GN=At3g06035 PE=2 SV=1)

HSP 1 Score: 99.4 bits (246), Expect = 4.8e-20
Identity = 51/142 (35.92%), Postives = 81/142 (57.04%), Query Frame = 1


Query: 34  KEDVLFQAMNSYRKSIKLTPMNKNSKAGCLVKQIAWDFDDQSPLSIFLSGSTIAPSNFSQ 93
           +ED+L   +NSYR +  LT ++KN  A CL  +IA  F ++   +   +GS   P    Q
Sbjct: 28  EEDILLTGINSYRTTQNLTILSKNENAECLADEIADQFKNKPCTND--TGSATVPGTEPQ 87

Query: 94  LPSLPDYLSKCKIELNHTKNGLILPLHIPTLALNLVLHECTNSQMAKYWSKPEFTSVGIG 153
             + P  L+KC + ++ T++G I+P  +P L  NLVL   T SQ +   +  +FT +GIG
Sbjct: 88  FANYPQILAKCHLNVSDTRDGSIMPACVPRLESNLVLTNFTKSQYSMSLNDSKFTGIGIG 147

Query: 154 CFEQWVVFAFATDSPTGSFSSA 176
             + W+V    T++P GS+S+A
Sbjct: 148 KEDDWIVVVLTTNTPEGSYSTA 167

[Close]

BLAST of CmoCh12G010950 vs. Swiss-Prot
Match: UGPI2_ARATH (Uncharacterized GPI-anchored protein At5g19240 OS=Arabidopsis thaliana GN=At5g19240 PE=2 SV=2)

HSP 1 Score: 76.6 bits (187), Expect = 3.4e-13
Identity = 44/143 (30.77%), Postives = 73/143 (51.05%), Query Frame = 1


Query: 35  EDVLFQAMNSYRKSIKLTPMNKNSKAGCLVKQIAWDFDDQSPLSIFLSGSTIAPSNFSQL 94
           E++LF   N YR+S+ LT + KN  A CL  ++     +Q   +   +GS   P     +
Sbjct: 30  ENLLFTVFNQYRESVNLTNLKKNKNAECLADEVVDQLQNQPCTN--TTGSASVPGTDPGI 89

Query: 95  PSLPDYLSKCKIELNHTKNGLILPLHIPTLALNLVLHECTNSQMAKYWSKPEFTSVGIGC 154
           P+ P+ L+KC++  N T++GLIL +  P       L    N  + K  +  +FT  G+G 
Sbjct: 90  PNFPNLLAKCRLNTNVTRDGLILQVCAPKHHSTPDLSSFAN-VLTKNLNDSKFTGAGVGI 149

Query: 155 FEQ--WVVFAFATDSPTGSFSSA 176
                W+V    T++P GS+S++
Sbjct: 150 DSDGIWLVTVLTTNTPGGSYSNS 169

[Close]

BLAST of CmoCh12G010950 vs. TrEMBL
Match: A6YTC6_CUCME (GPI-anchored protein-like protein OS=Cucumis melo subsp. melo PE=4 SV=1)

HSP 1 Score: 290.0 bits (741), Expect = 2.2e-75
Identity = 147/201 (73.13%), Postives = 164/201 (81.59%), Query Frame = 1


Query: 1   MALLSHKLGFFLYIVAHGLLLLSCSVHGDGPNVKEDVLFQAMNSYRKSIKLTPMNKNSKA 60
           MA  + KLG +L  +AHGLLLL+  VH D   V ED LF+AMN YR S +LTPMN+NSKA
Sbjct: 209 MAFTTPKLGLYLCGLAHGLLLLASLVHCD---VNEDTLFKAMNIYRSSKELTPMNRNSKA 268

Query: 61  GCLVKQIAWDFDDQSPLSIFLSGSTIAPSNFSQLPSLPDYLSKCKIELNHTKNGLILPLH 120
            C VKQIAWDFDDQ PLSIF SGS I PSN +QLP+LPDYL++C IELN+TKNGLILPLH
Sbjct: 269 DCFVKQIAWDFDDQLPLSIFTSGSNITPSNLTQLPNLPDYLTRCNIELNNTKNGLILPLH 328

Query: 121 IPTLALNLVLHECTNSQMAKYWSKPEFTSVGIGCFEQWVVFAFATDSPTGSFSSAVNLSD 180
           IPTL  NLVLH CT+SQMA Y SKPEFTS+GIGC+EQW VFAFATDSPTGSF+SAV LS 
Sbjct: 329 IPTLVSNLVLHGCTHSQMANYLSKPEFTSIGIGCYEQWAVFAFATDSPTGSFNSAVTLSK 388

Query: 181 LGLRHFYLVLSVLLGLLLLSG 202
           LGL HFYLV S+L GL LLSG
Sbjct: 389 LGLHHFYLVSSLLFGLFLLSG 406

[Close]

BLAST of CmoCh12G010950 vs. TrEMBL
Match: A0A0A0LIM2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G021650 PE=4 SV=1)

HSP 1 Score: 246.5 bits (628), Expect = 2.7e-62
Identity = 122/161 (75.78%), Postives = 138/161 (85.71%), Query Frame = 1


Query: 42  MNSYRKSIKLTPMNKNSKAGCLVKQIAWDFDDQSPLSIFLSGSTIAPSNFSQLPSLPDYL 101
           MN YR S +LTPM++NSKA CLVKQIAWD DDQSPLSIF SGS I PSN +QLP+LPDYL
Sbjct: 1   MNKYRSSKELTPMHRNSKADCLVKQIAWDLDDQSPLSIFTSGSPIIPSNLTQLPNLPDYL 60

Query: 102 SKCKIELNHTKNGLILPLHIPTLALNLVLHECTNSQMAKYWSKPEFTSVGIGCFEQWVVF 161
           +KCKIELN+T+ GLILPLHIPTLAL LVLH CT+SQM  Y SKPEFTS+GIGC+E+W VF
Sbjct: 61  TKCKIELNNTRKGLILPLHIPTLALKLVLHGCTHSQMDNYLSKPEFTSIGIGCYEEWAVF 120

Query: 162 AFATDSPTGSFSSAVNLSDLGLRHFYLVLSVLLGL-LLLSG 202
           AFATDSPTGSF+SAV LS LG +HF+LV S+L GL  LLSG
Sbjct: 121 AFATDSPTGSFNSAVKLSKLGHQHFFLVSSLLFGLFFLLSG 161

[Close]

BLAST of CmoCh12G010950 vs. TrEMBL
Match: W9S359_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_002452 PE=4 SV=1)

HSP 1 Score: 135.6 bits (340), Expect = 6.8e-29
Identity = 82/197 (41.62%), Postives = 118/197 (59.90%), Query Frame = 1


Query: 5   SHKLGFFLYIVAHGLLLLSCSVHGDGPNVKEDVLFQAMNSYRKSIKLTPMNKNSKAGCLV 64
           S KL    +++ H  LLL  SV     N  ED L Q +NSYR+S +L P+ KN KA CL 
Sbjct: 3   SFKLSLLFFVLLHAFLLLPNSVLS---NDDEDNLLQGLNSYRQSQRLPPLVKNGKAECLA 62

Query: 65  KQIAWDFDDQSPLSIFLSGSTIAPSNFSQLPSLPDYLSKCKIELNHTKNGLILPLHIPTL 124
            +IA + +DQ P + F +G+ IAPS  +QL + P  L KCKI+ N T +G+ILP+ +  L
Sbjct: 63  DEIADEMEDQ-PCTTFAAGANIAPSTQTQLTNYPKLLKKCKIDANTTSDGVILPVCVSNL 122

Query: 125 ALNLVLHECTNSQMAKYWSKPEFTSVGIGCFEQWVVFAFATDSPTGSFSSAVNL-SDLGL 184
              L+L   T++  AKY +  ++T  G+G  + W+V   +T +PTGSFS +++L S +G 
Sbjct: 123 VPTLLLTNYTHTSYAKYLNNTKYTGAGLGSEDDWMVVVLSTSTPTGSFSGSLSLVSMMGF 182

Query: 185 RHFYLVLSVLLGLLLLS 201
            H YLV   L  L +LS
Sbjct: 183 GH-YLVWG-LWSLFVLS 193

[Close]

BLAST of CmoCh12G010950 vs. TrEMBL
Match: M5WK00_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011720mg PE=4 SV=1)

HSP 1 Score: 135.2 bits (339), Expect = 8.9e-29
Identity = 78/197 (39.59%), Postives = 120/197 (60.91%), Query Frame = 1


Query: 7   KLGFFLYIVAHGLLLLSCSVHGDGPNVKEDVLFQAMNSYRKSIKLTPMNKNSKAGCLVKQ 66
           +L FF +++ H  LLLS  VHG   +  +D L Q +NSYR+S+ L  + KN  AGCL  +
Sbjct: 6   RLSFFFFVLFHAFLLLSPFVHGSDED--DDNLLQGINSYRRSLNLPVLIKNDNAGCLADR 65

Query: 67  IAWDFDDQSPLSIFLSGSTIAPSNFSQLPSLPDYLSKCKIELNHTKNGLILPLHIPTLAL 126
           IA D +D  P S   +G+ I PS+ S L +LP +L KCKI+ N T++G+ILP+ +P L  
Sbjct: 66  IADDIEDL-PCSSPTNGANILPSSQSPLANLPKHLRKCKIDANSTQDGVILPVCVPKLVP 125

Query: 127 NLVLHECTNS-QMAKYWSKPEFTSVGIGCFEQWVVFAFATDSPTGSFSSAVN--LSDLGL 186
            LVL   T+S +  KY +   F+ VG+G  + W V   A+ +P+G+F++A    +S  G 
Sbjct: 126 TLVLTNYTHSPKYVKYLNDSRFSGVGVGSEDNWAVVVLASSNPSGNFANAAGSLVSMFGF 185

Query: 187 RHFYLVLSVLLGLLLLS 201
            H+ + L + + L+L+S
Sbjct: 186 GHYLVFLLLGVSLILVS 199

[Close]

BLAST of CmoCh12G010950 vs. TrEMBL
Match: M5W0Y4_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa014919mg PE=4 SV=1)

HSP 1 Score: 122.1 bits (305), Expect = 7.8e-25
Identity = 72/197 (36.55%), Postives = 116/197 (58.88%), Query Frame = 1


Query: 3   LLSHKLGFFLYIVAHGLLLLSCSVHGDGPNVKEDVLFQAMNSYRKSIKLTPMNKNSKAGC 62
           + S+KL  FL  + + LL LS   H    N +ED +FQ +NS+++S+K     KNS A C
Sbjct: 1   MASYKLSLFLLALINCLLFLS---HPASCNEEEDKIFQGLNSFKQSLK-----KNSNAEC 60

Query: 63  LVKQIAWDFDDQSPLSIFLSGSTIAPSNFSQLPSLPDYLSKCKIELNHTKNGLILPLHIP 122
           L  +IA + +DQ   S       I P N  + P     + KC I++N T +G+ILP+ +P
Sbjct: 61  LADEIADELEDQPCSSA--DDYAIEPGNGPKFPKFDKLIKKCHIDINTTTDGIILPVCVP 120

Query: 123 TLALNLVLHECTNSQMAKYWSKPEFTSVGIGCFEQWVVFAFATDSPTGSFSSAVNLSDLG 182
               +LV+   T++Q AKY +  ++T  G+G  + WVV   +TD+ +GSFS A +L+ +G
Sbjct: 121 NWDPDLVIKNYTHTQYAKYLNGSKYTGAGVGTEDDWVVVVLSTDTESGSFSGAPSLAAIG 180

Query: 183 LRHFYLVLSVLLGLLLL 200
           + H+  ++++LLGL L+
Sbjct: 181 MVHY--MMAMLLGLFLI 185

[Close]

BLAST of CmoCh12G010950 vs. TAIR10
Match: AT5G19250.1 (AT5G19250.1 Glycoprotein membrane precursor GPI-anchored)

HSP 1 Score: 104.4 bits (259), Expect = 8.5e-23
Identity = 63/164 (38.41%), Postives = 88/164 (53.66%), Query Frame = 1


Query: 34  KEDVLFQAMNSYRKSIKLTPMNKNSKAGCLVKQIAWDFDDQSPLSIFLSGSTIAPSNFSQ 93
           +EDVL   +NSYR S+ LT +  N  A CL  +IA  F +Q   +   +GS   P     
Sbjct: 29  EEDVLLTGINSYRASLNLTTLIHNHNAECLADEIADQFKNQPCTNT--TGSASVPGTTPG 88

Query: 94  LPSLPDYLSKCKIELNHTKNGLILPLHIPTLALNLVLHECTNSQMAKYWSKPEFTSVGIG 153
            P+LP+ LSKC++    T++G ILP  +P L  +LVL   T SQ +K  +  +FT +GIG
Sbjct: 89  FPNLPNLLSKCRLNPTVTRDGAILPACVPNLDPSLVLTNFTMSQYSKDLNDSKFTGIGIG 148

Query: 154 CFEQWVVFAFATDSPTGSFSSAVNLSDLGLRHFYLVLSVLLGLL 198
             + W+V    T +P GS+S A N          LV S L+ LL
Sbjct: 149 SDDNWIVVVLTTSTPEGSYSPASNSGAFAFGVNGLVSSSLMFLL 190

[Close]

BLAST of CmoCh12G010950 vs. TAIR10
Match: AT1G54860.1 (AT1G54860.1 Glycoprotein membrane precursor GPI-anchored)

HSP 1 Score: 101.3 bits (251), Expect = 7.2e-22
Identity = 59/170 (34.71%), Postives = 93/170 (54.71%), Query Frame = 1


Query: 8   LGFFLYIVAHGLLLLSCSVHGDGPNVKEDVLFQAMNSYRKSIKLTPMNKNSKAGCLVKQI 67
           L F++  +    L+ +C V     N  ED L Q +NSYR + ++ P  KN KA C+  +I
Sbjct: 9   LSFYIIHLLIFSLISTCVVS----NQAEDNLLQGLNSYRTAQRVPPFAKNEKADCVADEI 68

Query: 68  AWDFDDQSPLSIFLSGSTIAPSNF-SQLPSLPDYLSKCKIELNHTKNGLILPLHIPTLAL 127
           A   +DQ P +   + ST+ P +   +L +  D LS+CKI+ N T++GLILP+ IP    
Sbjct: 69  ADKLEDQ-PCTNHTTASTVTPGSVPPRLTNYQDILSECKIDPNTTRDGLILPVCIPNRIP 128

Query: 128 NLVLHECTNSQMAKYWSKPEFTSVGIGCFEQWVVFAFATDSPTGSFSSAV 177
            L L   T +  A+Y +   +   G+G  ++W+V    T +P GSF++ V
Sbjct: 129 TLALTNYTQTGYARYLNDSRYVGAGVGSEKEWMVVVLTTSTPGGSFTAGV 173

[Close]

BLAST of CmoCh12G010950 vs. TAIR10
Match: AT3G06035.1 (AT3G06035.1 Glycoprotein membrane precursor GPI-anchored)

HSP 1 Score: 99.4 bits (246), Expect = 2.7e-21
Identity = 51/142 (35.92%), Postives = 81/142 (57.04%), Query Frame = 1


Query: 34  KEDVLFQAMNSYRKSIKLTPMNKNSKAGCLVKQIAWDFDDQSPLSIFLSGSTIAPSNFSQ 93
           +ED+L   +NSYR +  LT ++KN  A CL  +IA  F ++   +   +GS   P    Q
Sbjct: 28  EEDILLTGINSYRTTQNLTILSKNENAECLADEIADQFKNKPCTND--TGSATVPGTEPQ 87

Query: 94  LPSLPDYLSKCKIELNHTKNGLILPLHIPTLALNLVLHECTNSQMAKYWSKPEFTSVGIG 153
             + P  L+KC + ++ T++G I+P  +P L  NLVL   T SQ +   +  +FT +GIG
Sbjct: 88  FANYPQILAKCHLNVSDTRDGSIMPACVPRLESNLVLTNFTKSQYSMSLNDSKFTGIGIG 147

Query: 154 CFEQWVVFAFATDSPTGSFSSA 176
             + W+V    T++P GS+S+A
Sbjct: 148 KEDDWIVVVLTTNTPEGSYSTA 167

[Close]

BLAST of CmoCh12G010950 vs. TAIR10
Match: AT5G19240.1 (AT5G19240.1 Glycoprotein membrane precursor GPI-anchored)

HSP 1 Score: 76.6 bits (187), Expect = 1.9e-14
Identity = 44/143 (30.77%), Postives = 73/143 (51.05%), Query Frame = 1


Query: 35  EDVLFQAMNSYRKSIKLTPMNKNSKAGCLVKQIAWDFDDQSPLSIFLSGSTIAPSNFSQL 94
           E++LF   N YR+S+ LT + KN  A CL  ++     +Q   +   +GS   P     +
Sbjct: 30  ENLLFTVFNQYRESVNLTNLKKNKNAECLADEVVDQLQNQPCTN--TTGSASVPGTDPGI 89

Query: 95  PSLPDYLSKCKIELNHTKNGLILPLHIPTLALNLVLHECTNSQMAKYWSKPEFTSVGIGC 154
           P+ P+ L+KC++  N T++GLIL +  P       L    N  + K  +  +FT  G+G 
Sbjct: 90  PNFPNLLAKCRLNTNVTRDGLILQVCAPKHHSTPDLSSFAN-VLTKNLNDSKFTGAGVGI 149

Query: 155 FEQ--WVVFAFATDSPTGSFSSA 176
                W+V    T++P GS+S++
Sbjct: 150 DSDGIWLVTVLTTNTPGGSYSNS 169

[Close]

BLAST of CmoCh12G010950 vs. NCBI nr
Match: gi|150036257|gb|ABR67420.1| (GPI-anchored protein-like protein [Cucumis melo subsp. melo])

HSP 1 Score: 290.0 bits (741), Expect = 3.1e-75
Identity = 147/201 (73.13%), Postives = 164/201 (81.59%), Query Frame = 1


Query: 1   MALLSHKLGFFLYIVAHGLLLLSCSVHGDGPNVKEDVLFQAMNSYRKSIKLTPMNKNSKA 60
           MA  + KLG +L  +AHGLLLL+  VH D   V ED LF+AMN YR S +LTPMN+NSKA
Sbjct: 209 MAFTTPKLGLYLCGLAHGLLLLASLVHCD---VNEDTLFKAMNIYRSSKELTPMNRNSKA 268

Query: 61  GCLVKQIAWDFDDQSPLSIFLSGSTIAPSNFSQLPSLPDYLSKCKIELNHTKNGLILPLH 120
            C VKQIAWDFDDQ PLSIF SGS I PSN +QLP+LPDYL++C IELN+TKNGLILPLH
Sbjct: 269 DCFVKQIAWDFDDQLPLSIFTSGSNITPSNLTQLPNLPDYLTRCNIELNNTKNGLILPLH 328

Query: 121 IPTLALNLVLHECTNSQMAKYWSKPEFTSVGIGCFEQWVVFAFATDSPTGSFSSAVNLSD 180
           IPTL  NLVLH CT+SQMA Y SKPEFTS+GIGC+EQW VFAFATDSPTGSF+SAV LS 
Sbjct: 329 IPTLVSNLVLHGCTHSQMANYLSKPEFTSIGIGCYEQWAVFAFATDSPTGSFNSAVTLSK 388

Query: 181 LGLRHFYLVLSVLLGLLLLSG 202
           LGL HFYLV S+L GL LLSG
Sbjct: 389 LGLHHFYLVSSLLFGLFLLSG 406

[Close]

BLAST of CmoCh12G010950 vs. NCBI nr
Match: gi|659070382|ref|XP_008454803.1| (PREDICTED: uncharacterized GPI-anchored protein At5g19250-like [Cucumis melo])

HSP 1 Score: 290.0 bits (741), Expect = 3.1e-75
Identity = 147/201 (73.13%), Postives = 164/201 (81.59%), Query Frame = 1


Query: 1   MALLSHKLGFFLYIVAHGLLLLSCSVHGDGPNVKEDVLFQAMNSYRKSIKLTPMNKNSKA 60
           MA  + KLG +L  +AHGLLLL+  VH D   V ED LF+AMN YR S +LTPMN+NSKA
Sbjct: 42  MAFTTPKLGLYLCGLAHGLLLLASLVHCD---VNEDTLFKAMNIYRSSKELTPMNRNSKA 101

Query: 61  GCLVKQIAWDFDDQSPLSIFLSGSTIAPSNFSQLPSLPDYLSKCKIELNHTKNGLILPLH 120
            C VKQIAWDFDDQ PLSIF SGS I PSN +QLP+LPDYL++C IELN+TKNGLILPLH
Sbjct: 102 DCFVKQIAWDFDDQLPLSIFTSGSNITPSNLTQLPNLPDYLTRCNIELNNTKNGLILPLH 161

Query: 121 IPTLALNLVLHECTNSQMAKYWSKPEFTSVGIGCFEQWVVFAFATDSPTGSFSSAVNLSD 180
           IPTL  NLVLH CT+SQMA Y SKPEFTS+GIGC+EQW VFAFATDSPTGSF+SAV LS 
Sbjct: 162 IPTLVSNLVLHGCTHSQMANYLSKPEFTSIGIGCYEQWAVFAFATDSPTGSFNSAVTLSK 221

Query: 181 LGLRHFYLVLSVLLGLLLLSG 202
           LGL HFYLV S+L GL LLSG
Sbjct: 222 LGLHHFYLVSSLLFGLFLLSG 239

[Close]

BLAST of CmoCh12G010950 vs. NCBI nr
Match: gi|700205775|gb|KGN60894.1| (hypothetical protein Csa_2G021650 [Cucumis sativus])

HSP 1 Score: 246.5 bits (628), Expect = 3.9e-62
Identity = 122/161 (75.78%), Postives = 138/161 (85.71%), Query Frame = 1


Query: 42  MNSYRKSIKLTPMNKNSKAGCLVKQIAWDFDDQSPLSIFLSGSTIAPSNFSQLPSLPDYL 101
           MN YR S +LTPM++NSKA CLVKQIAWD DDQSPLSIF SGS I PSN +QLP+LPDYL
Sbjct: 1   MNKYRSSKELTPMHRNSKADCLVKQIAWDLDDQSPLSIFTSGSPIIPSNLTQLPNLPDYL 60

Query: 102 SKCKIELNHTKNGLILPLHIPTLALNLVLHECTNSQMAKYWSKPEFTSVGIGCFEQWVVF 161
           +KCKIELN+T+ GLILPLHIPTLAL LVLH CT+SQM  Y SKPEFTS+GIGC+E+W VF
Sbjct: 61  TKCKIELNNTRKGLILPLHIPTLALKLVLHGCTHSQMDNYLSKPEFTSIGIGCYEEWAVF 120

Query: 162 AFATDSPTGSFSSAVNLSDLGLRHFYLVLSVLLGL-LLLSG 202
           AFATDSPTGSF+SAV LS LG +HF+LV S+L GL  LLSG
Sbjct: 121 AFATDSPTGSFNSAVKLSKLGHQHFFLVSSLLFGLFFLLSG 161

[Close]

BLAST of CmoCh12G010950 vs. NCBI nr
Match: gi|694445978|ref|XP_009349387.1| (PREDICTED: uncharacterized GPI-anchored protein At5g19250-like [Pyrus x bretschneideri])

HSP 1 Score: 139.0 bits (349), Expect = 8.8e-30
Identity = 80/197 (40.61%), Postives = 122/197 (61.93%), Query Frame = 1


Query: 7   KLGFFLYIVAHGLLLLSCSVHGDGPNVKEDVLFQAMNSYRKSIKLTPMNKNSKAGCLVKQ 66
           KL FF +++AH L+LL+  V     +  ED L Q +NSYR S+ L  + KN  AGCL  +
Sbjct: 6   KLSFFFFVIAHSLVLLAPLVQSSDKD--EDSLLQGINSYRTSLNLPALVKNGNAGCLADK 65

Query: 67  IAWDFDDQSPLSIFLSGSTIAPSNFSQLPSLPDYLSKCKIELNHTKNGLILPLHIPTLAL 126
           IA D +DQ P S   +G+ I  ++ + L +LP +L KCKI+ N   +G+ILP+ +P L  
Sbjct: 66  IADDMEDQ-PCSSPTNGANILATSQTPLANLPKHLGKCKIDANSASDGVILPVCVPKLVP 125

Query: 127 NLVLHECTNS-QMAKYWSKPEFTSVGIGCFEQWVVFAFATDSPTGSFSSAVN--LSDLGL 186
            LVL   T+  Q AKY +  +FT VG+G  + W+V   A+++PTGSF++A +  +S +G 
Sbjct: 126 TLVLTNYTHQPQFAKYLNDTKFTGVGLGSEDDWMVVVLASNTPTGSFANAASSLVSTVGF 185

Query: 187 RHFYLVLSVLLGLLLLS 201
            HF + + V L ++L+S
Sbjct: 186 GHFLVSILVALCVILVS 199

[Close]

BLAST of CmoCh12G010950 vs. NCBI nr
Match: gi|645222214|ref|XP_008246485.1| (PREDICTED: uncharacterized GPI-anchored protein At5g19250 [Prunus mume])

HSP 1 Score: 136.3 bits (342), Expect = 5.7e-29
Identity = 79/197 (40.10%), Postives = 121/197 (61.42%), Query Frame = 1


Query: 7   KLGFFLYIVAHGLLLLSCSVHGDGPNVKEDVLFQAMNSYRKSIKLTPMNKNSKAGCLVKQ 66
           +L FF +++ H  LLLS  VHG   +  ED L Q +NSYR+S+ L  + KN  AGCL  +
Sbjct: 6   RLSFFFFVLFHAFLLLSPFVHGSDED--EDNLLQGINSYRRSLNLPVLVKNDNAGCLADR 65

Query: 67  IAWDFDDQSPLSIFLSGSTIAPSNFSQLPSLPDYLSKCKIELNHTKNGLILPLHIPTLAL 126
           IA + +D  P S   +G+ I PS+ S L +LP +L KCKI+ N T++G+ILP+ +P L  
Sbjct: 66  IADEIEDL-PCSSPTNGANILPSSQSPLANLPKHLRKCKIDANSTQDGVILPVCVPKLVP 125

Query: 127 NLVLHECTNS-QMAKYWSKPEFTSVGIGCFEQWVVFAFATDSPTGSFSSAVN--LSDLGL 186
            LVL   T+S + AKY +   F+ VG+G  + W V   A+ +P+G+F++A    +S  G 
Sbjct: 126 TLVLTNYTHSPKYAKYLNDSRFSGVGVGSEDNWAVVVLASSNPSGNFANAAGSLVSMFGF 185

Query: 187 RHFYLVLSVLLGLLLLS 201
            H+ + L + + L+L+S
Sbjct: 186 GHYLVFLLLGVSLILVS 199

The following BLAST results are available for this feature:

BLAST of CmoCh12G010950 vs. Swiss-Prot


Match Name	E-value	Identity	Description
UGPI3_ARATH	1.5e-21	38.41	Uncharacterized GPI-anchored protein At5g19250 OS=Arabidopsis thaliana GN=At5g19...	[more]
UGPI4_ARATH	4.8e-20	35.92	Uncharacterized GPI-anchored protein At3g06035 OS=Arabidopsis thaliana GN=At3g06...	[more]
UGPI2_ARATH	3.4e-13	30.77	Uncharacterized GPI-anchored protein At5g19240 OS=Arabidopsis thaliana GN=At5g19...	[more]

BLAST of CmoCh12G010950 vs. TrEMBL


Match Name	E-value	Identity	Description
A6YTC6_CUCME	2.2e-75	73.13	GPI-anchored protein-like protein OS=Cucumis melo subsp. melo PE=4 SV=1	[more]
A0A0A0LIM2_CUCSA	2.7e-62	75.78	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G021650 PE=4 SV=1	[more]
W9S359_9ROSA	6.8e-29	41.62	Uncharacterized protein OS=Morus notabilis GN=L484_002452 PE=4 SV=1	[more]
M5WK00_PRUPE	8.9e-29	39.59	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011720mg PE=4 SV=1	[more]
M5W0Y4_PRUPE	7.8e-25	36.55	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa014919mg PE=4 SV=1	[more]

BLAST of CmoCh12G010950 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G19250.1	8.5e-23	38.41	Glycoprotein membrane precursor GPI-anchored	[more]
AT1G54860.1	7.2e-22	34.71	Glycoprotein membrane precursor GPI-anchored	[more]
AT3G06035.1	2.7e-21	35.92	Glycoprotein membrane precursor GPI-anchored	[more]
AT5G19240.1	1.9e-14	30.77	Glycoprotein membrane precursor GPI-anchored	[more]

BLAST of CmoCh12G010950 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|150036257\|gb\|ABR67420.1\|	3.1e-75	73.13	GPI-anchored protein-like protein [Cucumis melo subsp. melo]	[more]
gi\|659070382\|ref\|XP_008454803.1\|	3.1e-75	73.13	PREDICTED: uncharacterized GPI-anchored protein At5g19250-like [Cucumis melo]	[more]
gi\|700205775\|gb\|KGN60894.1\|	3.9e-62	75.78	hypothetical protein Csa_2G021650 [Cucumis sativus]	[more]
gi\|694445978\|ref\|XP_009349387.1\|	8.8e-30	40.61	PREDICTED: uncharacterized GPI-anchored protein At5g19250-like [Pyrus x bretschn...	[more]
gi\|645222214\|ref\|XP_008246485.1\|	5.7e-29	40.10	PREDICTED: uncharacterized GPI-anchored protein At5g19250 [Prunus mume]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0008299	isoprenoid biosynthetic process
biological_process	GO:0000280	nuclear division
biological_process	GO:0007000	nucleolus organization
biological_process	GO:0016310	phosphorylation
biological_process	GO:0006694	steroid biosynthetic process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0005829	cytosol
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0004496	mevalonate kinase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh12G010950.1	CmoCh12G010950.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRODOM	PD208950		coord: 20..176 score: 6.0
None	No IPR available	PANTHER	PTHR33976	FAMILY NOT NAMED	coord: 4..199 score: 7.6
None	No IPR available	PANTHER	PTHR33976:SF2	GLYCOPROTEIN MEMBRANE GPI-ANCHORED	coord: 4..199 score: 7.6
None	No IPR available	PROFILE	PS51257	PROKAR_LIPOPROTEIN	coord: 1..24 score:

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh12G010950	Cucsa.091580	Cucumber (Gy14) v1	cgycmoB0174
CmoCh12G010950	CmaCh12G010790	Cucurbita maxima (Rimu)	cmacmoB177
CmoCh12G010950	Cla019881	Watermelon (97103) v1	cmowmB156
CmoCh12G010950	Csa2G021640	Cucumber (Chinese Long) v2	cmocuB157
CmoCh12G010950	CSPI02G03830	Wild cucumber (PI 183967)	cmocpiB159
CmoCh12G010950	Carg17552	Silver-seed gourd	carcmoB0973

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh12G010950	Melon (DHL92) v3.6.1	cmomedB157
CmoCh12G010950	Melon (DHL92) v3.6.1	cmomedB177
CmoCh12G010950	Silver-seed gourd	carcmoB1212
CmoCh12G010950	Cucumber (Chinese Long) v3	cmocucB0169
CmoCh12G010950	Cucumber (Chinese Long) v3	cmocucB0185
CmoCh12G010950	Watermelon (97103) v2	cmowmbB161
CmoCh12G010950	Watermelon (97103) v2	cmowmbB165
CmoCh12G010950	Wax gourd	cmowgoB0189
CmoCh12G010950	Wax gourd	cmowgoB0229
CmoCh12G010950	Cucurbita moschata (Rifu)	cmocmoB148
CmoCh12G010950	Cucumber (Gy14) v1	cgycmoB0521
CmoCh12G010950	Cucurbita maxima (Rimu)	cmacmoB763
CmoCh12G010950	Wild cucumber (PI 183967)	cmocpiB147
CmoCh12G010950	Cucumber (Chinese Long) v2	cmocuB146
CmoCh12G010950	Melon (DHL92) v3.5.1	cmomeB143
CmoCh12G010950	Melon (DHL92) v3.5.1	cmomeB161
CmoCh12G010950	Watermelon (Charleston Gray)	cmowcgB144
CmoCh12G010950	Watermelon (Charleston Gray)	cmowcgB148
CmoCh12G010950	Watermelon (97103) v1	cmowmB143
CmoCh12G010950	Cucurbita pepo (Zucchini)	cmocpeB147
CmoCh12G010950	Cucurbita pepo (Zucchini)	cmocpeB175
CmoCh12G010950	Bottle gourd (USVL1VR-Ls)	cmolsiB148
CmoCh12G010950	Bottle gourd (USVL1VR-Ls)	cmolsiB168
CmoCh12G010950	Cucumber (Gy14) v2	cgybcmoB050
CmoCh12G010950	Cucumber (Gy14) v2	cgybcmoB170