CmoCh12G007980 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GAAAAGCAAGAGAGGAGGACAGGTCCAACCGTGCGGGGCAGCGCCGAAGCGGCCGACTTGTGGGTCCTTTCTCCTTTAATCCTTTTGTAAGTATTCATTCCCATTTTTAGGTGATTGATTGCTGCAAAAGCCAACCAAGAAATTATGGAACGTGGGGGTGTGTCAGCGCTCACAGGGGGAAAAAACCTGTCTCTCCCCCCTCTCCACGTTCACCTGTTCGACGAAATGCCCCTGTATAAATTCTGCTCTTCAATTACCCCATTTCACCTGTGTTGTGAGTGAGTGAGCTTGGTTTTGCTACGCTACCATGGCCGAGTTCAAGCACCTTGTCATTGCCAAGTTTAAGGAGAGTGTGAACTTGGAAGAGATTGTTGAGCAAGTGGAGAAGATGGTTTCTGATATTGACTATGTCAAGTCCTTTGAATGGTATCTCTCCCCTTTTTATGCCCTTTATCTCTCTGTTGTGTAAGTAAGATGTTATGTGCTTTCAAGTCTGAGGACCTAGATAACCGATATTTTCTTTTTTAAGCTCTTTCTGTTGAGCTTCTCCTCAAAGTTTTTAAATGTTTCACACTCTAGTAAATGTTTCATTTTCCTCCCCAATCGAGGTGGGATCTTACAATTCATCTCCTTCAAGACTCAGCGTACTCGCTAGCATTCGTTCTTTCTCCAATCAATGTACCCCAACTAAATCTACTCCCTTTGGGGCCAGCATCCTTGCTGGCACACCGCCTCGTGTCTACCCCATTTGGGGAACAGCCTCCTCGCTAATACATCGTTCGGTGTTTGGCTCTGATACCATTTGTAAGAGCTCAAGCCCACCGCTGGTAGATGCTGTCCTCTTTGGGAGGAGGAAAACGAAATACCCTTTATAAGTGTGGATAAACTTCTCCCTAATAGACTTGTTTTAAAAATCTTGAGGGGAAGCTCAAAAGAGAAAACTCAAAAGAACAATATCTACTAGCGGTGGGCGTACACCGTAGATTTTAAGATTATAGATTATAGTTGTTATTTTTCAAAATTATGGGCGCATGAATGTTGATTTTTTTGAGTGAAATGTGGTTGGGTTGGACAGGGGACATGATGTTGAAGGGCAAGACATGGTGACACAAGGCTTCACGCACGTCTTCTCAATGACATTTGATGACAAAGAAGCCATCGCTTCATTTCTTACCCATCCTAAACATCTTGAGTTCTGTCCCACTTTCAGTGCAGCCATTGACAAGATTATTGTCCTTGATTTCCCCTCTCTTCTTGTCAAGCCACCTGCGCTGCCACCCCCATCACCCGAAGCTGTTCCACCATCTGTGATGGCATCCACACCTTTACCACCACCACCACCGCCAGTATCAGCACCAGCACCACCACCGACACCGGCATCTGCTCCGGCATAAGATTTAGAAACGTTAAAAAAATCGTAGTCTCATCTTTATTTGCAGTATGTAGTGTTGTGTTCTTCTGTTTGCTTTGAGAATCATGGAAAGTGAAGTGTTTAGTTAATGGGACGAATGTGGTTGATGAAGATCCATGCATTTGGTTGCTAAACTAATATAATATGTTCTTGCTATGTTTCTTTTTATTTCCTTGATTGATACTTACGTAGGATGCCCCATCTTCCAAAGTTAGTCTGCCACTATGTTGTCTTAAACCACTCTTATGTGTAATGACTTGCTAGATGAACACAGATGACAGGAG GAAAAGCAAGAGAGGAGGACAGGTCCAACCGTGCGGGGCAGCGCCGAAGCGGCCGACTTGTGGGTCCTTTCTCCTTTAATCCTTTTGTAAGTATTCATTCCCATTTTTAGGTGATTGATTGCTGCAAAAGCCAACCAAGAAATTATGGAACGTGGGGGTGTGTCAGCGCTCACAGGGGGAAAAAACCTGTCTCTCCCCCCTCTCCACGTTCACCTGTTCGACGAAATGCCCCTGTATAAATTCTGCTCTTCAATTACCCCATTTCACCTGTGTTGTGAGTGAGTGAGCTTGGTTTTGCTACGCTACCATGGCCGAGTTCAAGCACCTTGTCATTGCCAAGTTTAAGGAGAGTGTGAACTTGGAAGAGATTGTTGAGCAAGTGGAGAAGATGGTTTCTGATATTGACTATGTCAAGTCCTTTGAATGGGGACATGATGTTGAAGGGCAAGACATGGTGACACAAGGCTTCACGCACGTCTTCTCAATGACATTTGATGACAAAGAAGCCATCGCTTCATTTCTTACCCATCCTAAACATCTTGAGTTCTGTCCCACTTTCAGTGCAGCCATTGACAAGATTATTGTCCTTGATTTCCCCTCTCTTCTTGTCAAGCCACCTGCGCTGCCACCCCCATCACCCGAAGCTGTTCCACCATCTGTGATGGCATCCACACCTTTACCACCACCACCACCGCCAGTATCAGCACCAGCACCACCACCGACACCGGCATCTGCTCCGGCATAAGATTTAGAAACGTTAAAAAAATCGTAGTCTCATCTTTATTTGCAGTATGTAGTGTTGTGTTCTTCTGTTTGCTTTGAGAATCATGGAAAGTGAAGTGTTTAGTTAATGGGACGAATGTGGTTGATGAAGATCCATGCATTTGGTTGCTAAACTAATATAATATGTTCTTGCTATGTTTCTTTTTATTTCCTTGATTGATACTTACGTAGGATGCCCCATCTTCCAAAGTTAGTCTGCCACTATGTTGTCTTAAACCACTCTTATGTGTAATGACTTGCTAGATGAACACAGATGACAGGAG ATGGCCGAGTTCAAGCACCTTGTCATTGCCAAGTTTAAGGAGAGTGTGAACTTGGAAGAGATTGTTGAGCAAGTGGAGAAGATGGTTTCTGATATTGACTATGTCAAGTCCTTTGAATGGGGACATGATGTTGAAGGGCAAGACATGGTGACACAAGGCTTCACGCACGTCTTCTCAATGACATTTGATGACAAAGAAGCCATCGCTTCATTTCTTACCCATCCTAAACATCTTGAGTTCTGTCCCACTTTCAGTGCAGCCATTGACAAGATTATTGTCCTTGATTTCCCCTCTCTTCTTGTCAAGCCACCTGCGCTGCCACCCCCATCACCCGAAGCTGTTCCACCATCTGTGATGGCATCCACACCTTTACCACCACCACCACCGCCAGTATCAGCACCAGCACCACCACCGACACCGGCATCTGCTCCGGCATAA
BLAST of CmoCh12G007980 vs. Swiss-Prot
Match: Y5258_ARATH (Stress-response A/B barrel domain-containing protein At5g22580 OS=Arabidopsis thaliana GN=At5g22580 PE=1 SV=1) HSP 1 Score: 120.6 bits (301), Expect = 1.5e-26 Identity = 57/106 (53.77%), Postives = 75/106 (70.75%), Query Frame = 1
BLAST of CmoCh12G007980 vs. Swiss-Prot
Match: POP3_ARATH (Stress-response A/B barrel domain-containing protein HS1 OS=Arabidopsis thaliana GN=HS1 PE=1 SV=1) HSP 1 Score: 85.9 bits (211), Expect = 4.0e-16 Identity = 37/95 (38.95%), Postives = 67/95 (70.53%), Query Frame = 1
BLAST of CmoCh12G007980 vs. Swiss-Prot
Match: OLIAC_CANSA (Olivetolic acid cyclase OS=Cannabis sativa GN=OAC PE=1 SV=1) HSP 1 Score: 59.7 bits (143), Expect = 3.1e-08 Identity = 29/95 (30.53%), Postives = 52/95 (54.74%), Query Frame = 1
BLAST of CmoCh12G007980 vs. TrEMBL
Match: A0A0A0LY53_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G151000 PE=4 SV=1) HSP 1 Score: 188.3 bits (477), Expect = 6.4e-45 Identity = 110/145 (75.86%), Postives = 121/145 (83.45%), Query Frame = 1
BLAST of CmoCh12G007980 vs. TrEMBL
Match: A0A061GZS6_THECC (Stress responsive A/B Barrel Domain OS=Theobroma cacao GN=TCM_041496 PE=4 SV=1) HSP 1 Score: 142.1 bits (357), Expect = 5.2e-31 Identity = 66/105 (62.86%), Postives = 85/105 (80.95%), Query Frame = 1
BLAST of CmoCh12G007980 vs. TrEMBL
Match: I3SYE0_LOTJA (Uncharacterized protein OS=Lotus japonicus PE=2 SV=1) HSP 1 Score: 139.4 bits (350), Expect = 3.4e-30 Identity = 67/105 (63.81%), Postives = 81/105 (77.14%), Query Frame = 1
BLAST of CmoCh12G007980 vs. TrEMBL
Match: V4UE32_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10029614mg PE=4 SV=1) HSP 1 Score: 139.4 bits (350), Expect = 3.4e-30 Identity = 67/105 (63.81%), Postives = 85/105 (80.95%), Query Frame = 1
BLAST of CmoCh12G007980 vs. TrEMBL
Match: A0A067E3K9_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g033664mg PE=4 SV=1) HSP 1 Score: 139.4 bits (350), Expect = 3.4e-30 Identity = 67/105 (63.81%), Postives = 85/105 (80.95%), Query Frame = 1
BLAST of CmoCh12G007980 vs. TAIR10
Match: AT5G22580.1 (AT5G22580.1 Stress responsive A/B Barrel Domain) HSP 1 Score: 120.6 bits (301), Expect = 8.3e-28 Identity = 57/106 (53.77%), Postives = 75/106 (70.75%), Query Frame = 1
BLAST of CmoCh12G007980 vs. TAIR10
Match: AT3G17210.1 (AT3G17210.1 heat stable protein 1) HSP 1 Score: 85.9 bits (211), Expect = 2.3e-17 Identity = 37/95 (38.95%), Postives = 67/95 (70.53%), Query Frame = 1
BLAST of CmoCh12G007980 vs. NCBI nr
Match: gi|659071770|ref|XP_008461858.1| (PREDICTED: uncharacterized protein At5g22580-like [Cucumis melo]) HSP 1 Score: 189.9 bits (481), Expect = 3.1e-45 Identity = 113/154 (73.38%), Postives = 123/154 (79.87%), Query Frame = 1
BLAST of CmoCh12G007980 vs. NCBI nr
Match: gi|449443414|ref|XP_004139472.1| (PREDICTED: uncharacterized protein At5g22580-like [Cucumis sativus]) HSP 1 Score: 188.3 bits (477), Expect = 9.1e-45 Identity = 110/145 (75.86%), Postives = 121/145 (83.45%), Query Frame = 1
BLAST of CmoCh12G007980 vs. NCBI nr
Match: gi|1009113513|ref|XP_015873186.1| (PREDICTED: uncharacterized protein At5g22580 [Ziziphus jujuba]) HSP 1 Score: 149.8 bits (377), Expect = 3.6e-33 Identity = 70/105 (66.67%), Postives = 87/105 (82.86%), Query Frame = 1
BLAST of CmoCh12G007980 vs. NCBI nr
Match: gi|590587294|ref|XP_007015930.1| (Stress responsive A/B Barrel Domain [Theobroma cacao]) HSP 1 Score: 142.1 bits (357), Expect = 7.5e-31 Identity = 66/105 (62.86%), Postives = 85/105 (80.95%), Query Frame = 1
BLAST of CmoCh12G007980 vs. NCBI nr
Match: gi|657986610|ref|XP_008385440.1| (PREDICTED: uncharacterized protein At5g22580 [Malus domestica]) HSP 1 Score: 139.8 bits (351), Expect = 3.7e-30 Identity = 67/108 (62.04%), Postives = 85/108 (78.70%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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