CmoCh12G006240 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh12G006240
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionOuter envelope pore protein 21, chloroplastic
LocationCmo_Chr12 : 3910080 .. 3914143 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
TAAAATTTGAATTAGGTAAGGATAAACTTCTGTGCTGAGTGAGGTTTTGAAGGAAATTCGGTAACAGGCAGAGCAGAGCAGAGCCATGGCAGCTTGGGGTTTCTGAATTTTAGAGATACGGTTTCACTTTCACGTTCAGTGCAGCTTCTTCTTCTTCTCTTTCATTTCCACTTCTTCTACTTTCTGCATCATCGATGGAGACTTCTCTCAGATGTGGCGGAGACTCCAGAGCCTTAAGAATCCACGCCAAGGAGAAGATTCCTCTCGACTCCAACATTTTCTTACAGGTAATCCTATGGTCGGCGCTGATTTTTGTAGAATTTGGCAATGTTATCTTGCGTTTTGATCTTTTCTATCTTTTCTGTTGGTTTTAGTGTTCCTCTGTCGAATTGATTGCAAAACGTGTCTTGGAGGATTGTGTTGTGTTGATTTAGAAGAATAGTGGATTTTGTAGACCTTAGTTCTTACTGACATTCATTTTCCTAAGGTTCATGGAGAGCTAGATACAAGAATGGGAGAACCGAGTCTACTTGCTGCTTCCGTGAGACAATTTTTTCCCGACGTAAGGTTTTCTTCTGTGGAATCAATTTACTTTGTGCAGGCCCGGATTTCTTTTTTTTTTATATCATTGTTTTGTTAATCAAATGTAGTTGTTTGCAAGCGCGGGTATAGGGGTGCAATATGACAAATATAGGAAACTTCAGCATTTTGCTCGAGGGAAAATGTCTTTCCCTGTGACAACCGATGGTATGTTGCAATTTACTATTAAAGGGCAATCTCATCATGACAAGGATTTTAAGCAGGTTAGTATCGATTAACTATATCTCAGGATACGGAAACGAAAAATGCAAAGGCTTATAAGTGATGGTTTCTTTGGTTTTCTTCTGCAACCAGTTTTGTTTCATTGTTTTTTTGGCAGACTAATTTCAAAGGGGCTGCTGAATTTTCCTTGGGTGTATATAATGTCCAAGGGGATCAAGATGTAAGGGTCAAACTAGGATTTGAAGTGTTCGAAAAGGTAGAGTTCTCTGTTTTTGTAGTGGTCATTCAAATCATATATTTACTTTCTATACTAGATGCTATTTGATTGTCTCTATGTTATCTTATTATTTATTATCTTGTAGCCCTTCTTTAGAAAGAAAAAGAAAAAATATATAACGATTGCAAAAGGTGATTGGAACTTTTCTTTAGTCGTGAACCTTGGATTGAAGAGTTGGCTATGGGGCCTTGAGGCAACAGACTCTGTCTTTTTTTCTCCTTCCAATTTCGCAGCTGATTTGTCTATGGCTGTTGAACAAAGGCAGGGCTTCTATTTGATTAAAGGCAGTATTTAGGGAGGCATCTTGTTTGTATAAAAACCTATAAAATGGCCTCGTTTAGCATGAGCAAATAGCAGTAAAGAGAAACTTGAGGACTGTTTAAAACTTAATCCTTATCAAGCATGTTATCATGAAGCTCTTTAATACTACAGGAAGTTGACCACTTAGACATCCCCTGAGACATTGTAAACAAAGCTGAAATTTGGAGCTAGAGAAGAAGTTTACAAACCCACCCTCTGAACTTCAAAGATTGTAGATTGTCCTGATCCTTGCTCAAGCAGGCCTTTCCAATGAATCCTTAAAAAAAATCCATTATTCAAAATATATTGCTGACTGCATGCATACCTCTGCATTGGATACATTATAAAAAGAAATATGATCTTACAATTTAAATTTCTGGTCAAATTTGTCCCTATAATTTGGAGAAAGTTAGAATTTCGTTCATATGACAATATTTTAAAAAGCATTCAAGACGTAAGGGTTGAGACGAAGCAACAACCTTCAACATATACAAAGAGGTTTGTGCCTTTGTTGAGAGAAGTGTAAGCCTCTATGTGTACTCCTCATGAGGCTATAAGGCGTAAGCCTTATGTTTATTTGTAATGGTTGTGGGCCATGGGTCCATGTGGTGTATTTAATTTATGCAGTGCATGTTTTTTTACTTAATTCGGGGTCATGGTTCATGCGCATATCAAAGAAATTTAAAAATGCACTGAAAAGTGAAAAAGGCATGCCTAAAAAGTTCAATCGGTTTACTAAAGGAAAACAAAAAAAAGTGCAAGCTGTAGTTATTTTAAACTAGAACAACTACTGTGAGTTTTTGCATTAGCTAAAGAAAGTTTGCAAGGTGACTAGCTCTTTGACGGCAACTCACCAAAGTGAATTTTGTTCTCTCCTCTAATTTTGTTTTGATTTTTTTTTTTTTTTTTTCATTTATTCACGAAAAGCTGAGTTTCATTCTTTTGAAGTTGCAATGGTTGTGGGCTAGCCTGATTTGTATTTCAGATATTGGTTTGATTTTGTTGGATTGGCGTATGTTTTTGTAGTTCATTCTTGGACCCCCTTTTGTTGGACTTTTTTTGTATGCCTTTAATGATAACTTGGTTTCTTACCCCCCCTCCAAAAACAAAAAGTTAAGAATTCGTAAGGTTTTATGATTTAGATTTAATTTTTTAGTTTAAAATGAGGCTTAAGCCTCATACCGCCTCAAAGCTTACGCCTCGCTTCTCCATAAGAAAACATCTTGAGGCCATCTTAAGCCTTTTGAAACACTACCTCTAGTTTTAAAAGTTAGATTTTGTCCTTTTCGTGTGATAAAACCCTACTGTAAGAATTATTTATGCGAGTTTATCCAACCACGTAGACTATTTATGAAGTTTTGTCAAACTATAAGGACAAAGTTCTAACTTTGAAATTATAACTTAAATTTGTAATTTAACCTAAATTTCTTTGAAAGTTTCCTTAAGAAACTAAACTTATAACTGAAGATGTTAGGCAGCAAAAATGGCATAGTTTCTATTGGTTGGAAGAAAGATGCTCTCATAGCTCAATAGACATAATCGGTCTCTCTGAGTGAGACCTAAAGATCTTTTCACTCTGAAGTATCATTTCATGTGAAACCAGCTAATTGTTTTGGGGGGATCCTTGGGCGGGGAAGAAGTTGAACTATTCCATTCCAAGACTTTGATGTGACTGTATGTAGGAGACTGCCAGAACTGCTTGTTCAGTTTGTTCTTGCACTTCTGAAAAGCTGTAAATGATCCTTGATGAACAAGCTGCTTTTCCAACCAGTTGCTGGATGTTAGATTGTGGAGGTAGGAAGCCTTGGGGAACTTCGCTAAGAGTCTTTGTTTGGCAACTAGTTTCAGAACAAGTTTCTATTTTTGTTTTTAAATTTGTGGGAACATAGTGAAAGAAATCCCAAGTCCTTTGTTACTCAAATTTGAAAGAAATATCCCAGCCTTCTTGATCTCACTAAAGCGACGTGGAAATATACCTCCTACAGGTTAAATTCTTCCAGCATACTTTATTTAACATTGGGTGAGACTAATACTTGATGGAGAGAAAAACCTGTTGTTGTTGTTGATGTTTGCTTTTGAAAGAGTTTGGATTTGAATAATAGTACCTCCCTATGCATCGAGTCCCCAAGGATTCATGGAGCATATGTCTTTTTAAACAAATCATGGAGCATATGTCTTTTTAAACAAATCATGGAGCATGTTTGTCCTGGTCACTTTTTTAGTATAAAAGCCACAACTCTTTGGTTAAGGAAGGCCCTCATAATTTTTTAGGGTACATGTGATTCGACTATTAGTTTGTTTTTTTAGCTTCCTTTGGAGTGTCCTTCCAAAAGAATTTTTAATCAATGCCAAATTGTCGTAGTTCTTTAATTTCAATTGACTTTGCAACTGATATGATAAGATTTCTTTTCCTTCACCTTTCTAGTTCAAGTGGCCTGAACCATGTATTATCATCCTTGACATAACAGCTTAACACATTACATTATAATGCAATTATTGGTCTATATGGGTTTTTTTTTCACTTTCTTCCACCTCTTTTATACAGATACCATATCTTCAGATCAGGGAAAACAATTGGTCATTGAATGCAGACATCAATGGTAGATGGAGTGTGAGATTCATTCTGTGAGAATTAGAAGTAGAAGTTGAACTTTCTCCTTCAGAAATTGTAGGTTCAGCTGCGGAATTCCTTTCTAAAATTTGTATGTTCCTTTAGATCCATTGA

mRNA sequence

TAAAATTTGAATTAGGTAAGGATAAACTTCTGTGCTGAGTGAGGTTTTGAAGGAAATTCGGTAACAGGCAGAGCAGAGCAGAGCCATGGCAGCTTGGGGTTTCTGAATTTTAGAGATACGGTTTCACTTTCACGTTCAGTGCAGCTTCTTCTTCTTCTCTTTCATTTCCACTTCTTCTACTTTCTGCATCATCGATGGAGACTTCTCTCAGATGTGGCGGAGACTCCAGAGCCTTAAGAATCCACGCCAAGGAGAAGATTCCTCTCGACTCCAACATTTTCTTACAGTTGTTTGCAAGCGCGGGTATAGGGGTGCAATATGACAAATATAGGAAACTTCAGCATTTTGCTCGAGGGAAAATGTCTTTCCCTGTGACAACCGATGGTATGTTGCAATTTACTATTAAAGGGCAATCTCATCATGACAAGGATTTTAAGCAGACTAATTTCAAAGGGGCTGCTGAATTTTCCTTGGGTGTATATAATGTCCAAGGGGATCAAGATATCCATTGA

Coding sequence (CDS)

ATGGAGACTTCTCTCAGATGTGGCGGAGACTCCAGAGCCTTAAGAATCCACGCCAAGGAGAAGATTCCTCTCGACTCCAACATTTTCTTACAGTTGTTTGCAAGCGCGGGTATAGGGGTGCAATATGACAAATATAGGAAACTTCAGCATTTTGCTCGAGGGAAAATGTCTTTCCCTGTGACAACCGATGGTATGTTGCAATTTACTATTAAAGGGCAATCTCATCATGACAAGGATTTTAAGCAGACTAATTTCAAAGGGGCTGCTGAATTTTCCTTGGGTGTATATAATGTCCAAGGGGATCAAGATATCCATTGA
Homology
[Close]
BLAST of CmoCh12G006240 vs. Swiss-Prot
Match: OEP21_PEA (Outer envelope pore protein 21, chloroplastic OS=Pisum sativum GN=OEP21 PE=1 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 6.7e-21
Identity = 57/139 (41.01%), Postives = 75/139 (53.96%), Query Frame = 1 

Query: 1   METSLRCGGDSRALRIHAKEKIPLDSNIFLQ-------------------------LFAS 60
           METSLR GGDS+AL+IHAKEK+ +D+N F Q                           A+
Sbjct: 1   METSLRYGGDSKALKIHAKEKLRIDTNTFFQVRGGLDTKTGQPSSGSALIRHFYPNFSAT 60

Query: 61  AGIGVQYDKYR----------KLQHFARGKMSFPVTTDGMLQFTIKGQSHHDKDFKQTNF 105
            G+GV+YDK            KL++    K +FPVT DG++ F IKG    D+DFK+   
Sbjct: 61  LGVGVRYDKQDSVGVRYAKNDKLRYTVLAKKTFPVTNDGLVNFKIKGGCDVDQDFKEWKS 120

[Close]
BLAST of CmoCh12G006240 vs. Swiss-Prot
Match: OP21A_ARATH (Outer envelope pore protein 21A, chloroplastic OS=Arabidopsis thaliana GN=OEP21A PE=2 SV=1)

HSP 1 Score: 96.7 bits (239), Expect = 1.6e-19
Identity = 53/129 (41.09%), Postives = 69/129 (53.49%), Query Frame = 1 

Query: 1   METSLRCGGDSRALRIHAKEKIPLDSNIFLQLFA-------------------------S 60
           METSLR   +SR+L+IHAKEK P++S   LQL                           +
Sbjct: 1   METSLRYATNSRSLKIHAKEKFPVNSKTRLQLHGELDTGAGVPSYFCAMIRYFFHEASTN 60

Query: 61  AGIGVQYDKYRKLQHFARGKMSFPVTTDGMLQFTIKGQSHHDKDFKQTNFKGAAEFSLGV 105
            G+G+ YDK  KL+   RGK  FPV TD ++ F IKG+   D+D  Q N KGAAEF   +
Sbjct: 61  LGVGLHYDKREKLRCLVRGKKKFPVITDEVVTFNIKGRCDFDQDLVQRNAKGAAEFDWNI 120

[Close]
BLAST of CmoCh12G006240 vs. Swiss-Prot
Match: OP21B_ARATH (Outer envelope pore protein 21B, chloroplastic OS=Arabidopsis thaliana GN=OEP21B PE=2 SV=1)

HSP 1 Score: 90.9 bits (224), Expect = 9.0e-18
Identity = 48/129 (37.21%), Postives = 69/129 (53.49%), Query Frame = 1 

Query: 1   METSLRCGGDSRALRIHAKEKIPLDSNIFLQLFASA------------------------ 60
           METS+R   +S++++IHAKEK+P++S   LQL                            
Sbjct: 1   METSMRYTSNSKSMKIHAKEKVPVNSKTHLQLHGELDTGTGAPSYFCAMIRHFFPEASTG 60

Query: 61  -GIGVQYDKYRKLQHFARGKMSFPVTTDGMLQFTIKGQSHHDKDFKQTNFKGAAEFSLGV 105
            G+G+ YDK +KL+   RGK  FPV  D  + F IKG+   D+D  Q N KGAAEF+  +
Sbjct: 61  LGVGLHYDKRQKLRCLVRGKKEFPVRADKRVTFNIKGRCDIDQDLNQKNPKGAAEFAWNI 120

[Close]
BLAST of CmoCh12G006240 vs. TrEMBL
Match: A0A0A0KGQ0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G355410 PE=4 SV=1)

HSP 1 Score: 152.1 bits (383), Expect = 3.7e-34
Identity = 79/129 (61.24%), Postives = 89/129 (68.99%), Query Frame = 1 

Query: 1   METSLRCGGDSRALRIHAKEKIPLDSNIFLQ-------------------------LFAS 60
           M+TS R   DSRALRIHAKEKI LDSN+FLQ                         L AS
Sbjct: 1   MDTSFRYAADSRALRIHAKEKISLDSNVFLQVRGELDTRIGEPSLLAASVRQFYPDLSAS 60

Query: 61  AGIGVQYDKYRKLQHFARGKMSFPVTTDGMLQFTIKGQSHHDKDFKQTNFKGAAEFSLGV 105
           AG+GVQYDKY+KL +  RGKMSFPVTTDG+L+FTIKGQSH DKDFKQ  +KGAAEFSLGV
Sbjct: 61  AGLGVQYDKYKKLHYVGRGKMSFPVTTDGLLRFTIKGQSHLDKDFKQFKYKGAAEFSLGV 120

[Close]
BLAST of CmoCh12G006240 vs. TrEMBL
Match: A5BH90_VITVI (Putative uncharacterized protein (Fragment) OS=Vitis vinifera GN=VITISV_024653 PE=4 SV=1)

HSP 1 Score: 121.7 bits (304), Expect = 5.3e-25
Identity = 61/129 (47.29%), Postives = 79/129 (61.24%), Query Frame = 1 

Query: 1   METSLRCGGDSRALRIHAKEKIPLDSNIFL-------------------------QLFAS 60
           METSLR GGD++ALRIHAKEK P+D    L                          L AS
Sbjct: 1   METSLRYGGDTKALRIHAKEKFPIDLKTHLLVRVELDTRIGAPSYVSAVIRHFYPDLSAS 60

Query: 61  AGIGVQYDKYRKLQHFARGKMSFPVTTDGMLQFTIKGQSHHDKDFKQTNFKGAAEFSLGV 105
            G+G+QYDK+ KL++  RGK +FPVTTDG+L F +KGQ   DK+F++   +GAAEFS  +
Sbjct: 61  LGVGLQYDKHEKLRYSVRGKKTFPVTTDGLLSFNVKGQCDVDKEFRERKSRGAAEFSWSI 120

[Close]
BLAST of CmoCh12G006240 vs. TrEMBL
Match: D7UDD6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0122g00880 PE=4 SV=1)

HSP 1 Score: 121.7 bits (304), Expect = 5.3e-25
Identity = 61/129 (47.29%), Postives = 79/129 (61.24%), Query Frame = 1 

Query: 1   METSLRCGGDSRALRIHAKEKIPLDSNIFL-------------------------QLFAS 60
           METSLR GGD++ALRIHAKEK P+D    L                          L AS
Sbjct: 1   METSLRYGGDTKALRIHAKEKFPIDLKTHLLVRGELDTRIGAPSYVSAVIRHFYPDLSAS 60

Query: 61  AGIGVQYDKYRKLQHFARGKMSFPVTTDGMLQFTIKGQSHHDKDFKQTNFKGAAEFSLGV 105
            G+G+QYDK+ KL++  RGK +FPVTTDG+L F +KGQ   DK+F++   +GAAEFS  +
Sbjct: 61  LGVGLQYDKHEKLRYSVRGKKTFPVTTDGLLSFNVKGQCDVDKEFRERKSRGAAEFSWSI 120

[Close]
BLAST of CmoCh12G006240 vs. TrEMBL
Match: A0A067HBU4_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g031023mg PE=4 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 6.9e-25
Identity = 65/129 (50.39%), Postives = 80/129 (62.02%), Query Frame = 1 

Query: 1   METSLRCGGDSRALRIHAKEKIPLDSNIFLQ-------------------------LFAS 60
           METSLR G DS+ALRI+AKEKIP+DSN  LQ                         L AS
Sbjct: 1   METSLRYGKDSKALRIYAKEKIPIDSNTRLQVHGELDTRVGAPSYVSAMIRHFYPDLSAS 60

Query: 61  AGIGVQYDKYRKLQHFARGKMSFPVTTDGMLQFTIKGQSHHDKDFKQTNFKGAAEFSLGV 105
            G+GVQYDK+ KL++  RGK  FPVT+ G+L F IKG+   DK+FKQ   +GAAEFS  +
Sbjct: 61  FGLGVQYDKHEKLRYTVRGKKVFPVTSTGLLSFNIKGRCEVDKEFKQRKSRGAAEFSWSI 120

[Close]
BLAST of CmoCh12G006240 vs. TrEMBL
Match: V4T661_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10002700mg PE=4 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 6.9e-25
Identity = 65/129 (50.39%), Postives = 80/129 (62.02%), Query Frame = 1 

Query: 1   METSLRCGGDSRALRIHAKEKIPLDSNIFLQ-------------------------LFAS 60
           METSLR G DS+ALRI+AKEKIP+DSN  LQ                         L AS
Sbjct: 1   METSLRYGKDSKALRIYAKEKIPIDSNTRLQVHGELDTRVGAPSYVSAMIRHFYPDLSAS 60

Query: 61  AGIGVQYDKYRKLQHFARGKMSFPVTTDGMLQFTIKGQSHHDKDFKQTNFKGAAEFSLGV 105
            G+GVQYDK+ KL++  RGK  FPVT+ G+L F IKG+   DK+FKQ   +GAAEFS  +
Sbjct: 61  FGLGVQYDKHEKLRYTVRGKKVFPVTSTGLLSFNIKGRCEVDKEFKQRKSRGAAEFSWSI 120

[Close]
BLAST of CmoCh12G006240 vs. TAIR10
Match: AT1G20816.1 (AT1G20816.1 unknown protein)

HSP 1 Score: 96.7 bits (239), Expect = 9.2e-21
Identity = 53/129 (41.09%), Postives = 69/129 (53.49%), Query Frame = 1 

Query: 1   METSLRCGGDSRALRIHAKEKIPLDSNIFLQLFA-------------------------S 60
           METSLR   +SR+L+IHAKEK P++S   LQL                           +
Sbjct: 1   METSLRYATNSRSLKIHAKEKFPVNSKTRLQLHGELDTGAGVPSYFCAMIRYFFHEASTN 60

Query: 61  AGIGVQYDKYRKLQHFARGKMSFPVTTDGMLQFTIKGQSHHDKDFKQTNFKGAAEFSLGV 105
            G+G+ YDK  KL+   RGK  FPV TD ++ F IKG+   D+D  Q N KGAAEF   +
Sbjct: 61  LGVGLHYDKREKLRCLVRGKKKFPVITDEVVTFNIKGRCDFDQDLVQRNAKGAAEFDWNI 120

[Close]
BLAST of CmoCh12G006240 vs. TAIR10
Match: AT1G76405.2 (AT1G76405.2 unknown protein)

HSP 1 Score: 90.9 bits (224), Expect = 5.1e-19
Identity = 48/129 (37.21%), Postives = 69/129 (53.49%), Query Frame = 1 

Query: 1   METSLRCGGDSRALRIHAKEKIPLDSNIFLQLFASA------------------------ 60
           METS+R   +S++++IHAKEK+P++S   LQL                            
Sbjct: 1   METSMRYTSNSKSMKIHAKEKVPVNSKTHLQLHGELDTGTGAPSYFCAMIRHFFPEASTG 60

Query: 61  -GIGVQYDKYRKLQHFARGKMSFPVTTDGMLQFTIKGQSHHDKDFKQTNFKGAAEFSLGV 105
            G+G+ YDK +KL+   RGK  FPV  D  + F IKG+   D+D  Q N KGAAEF+  +
Sbjct: 61  LGVGLHYDKRQKLRCLVRGKKEFPVRADKRVTFNIKGRCDIDQDLNQKNPKGAAEFAWNI 120

[Close]
BLAST of CmoCh12G006240 vs. NCBI nr
Match: gi|659129746|ref|XP_008464824.1| (PREDICTED: outer envelope pore protein 21, chloroplastic [Cucumis melo])

HSP 1 Score: 155.2 bits (391), Expect = 6.2e-35
Identity = 81/129 (62.79%), Postives = 90/129 (69.77%), Query Frame = 1 

Query: 1   METSLRCGGDSRALRIHAKEKIPLDSNIFLQ-------------------------LFAS 60
           M+TS R  GDSRALRIHAKEKI LDSNIFLQ                         L AS
Sbjct: 1   MDTSFRYAGDSRALRIHAKEKISLDSNIFLQVRGELDTRIGEPSLLAASVRQFNQDLSAS 60

Query: 61  AGIGVQYDKYRKLQHFARGKMSFPVTTDGMLQFTIKGQSHHDKDFKQTNFKGAAEFSLGV 105
           AG+GVQYDKY+KL +  RGKMSFPVTTDG+L+FTIKGQSH DKDFKQ  +KGAAEFSLGV
Sbjct: 61  AGLGVQYDKYKKLHYVGRGKMSFPVTTDGLLRFTIKGQSHLDKDFKQIKYKGAAEFSLGV 120

[Close]
BLAST of CmoCh12G006240 vs. NCBI nr
Match: gi|449453001|ref|XP_004144247.1| (PREDICTED: outer envelope pore protein 21, chloroplastic [Cucumis sativus])

HSP 1 Score: 152.1 bits (383), Expect = 5.3e-34
Identity = 79/129 (61.24%), Postives = 89/129 (68.99%), Query Frame = 1 

Query: 1   METSLRCGGDSRALRIHAKEKIPLDSNIFLQ-------------------------LFAS 60
           M+TS R   DSRALRIHAKEKI LDSN+FLQ                         L AS
Sbjct: 1   MDTSFRYAADSRALRIHAKEKISLDSNVFLQVRGELDTRIGEPSLLAASVRQFYPDLSAS 60

Query: 61  AGIGVQYDKYRKLQHFARGKMSFPVTTDGMLQFTIKGQSHHDKDFKQTNFKGAAEFSLGV 105
           AG+GVQYDKY+KL +  RGKMSFPVTTDG+L+FTIKGQSH DKDFKQ  +KGAAEFSLGV
Sbjct: 61  AGLGVQYDKYKKLHYVGRGKMSFPVTTDGLLRFTIKGQSHLDKDFKQFKYKGAAEFSLGV 120

[Close]
BLAST of CmoCh12G006240 vs. NCBI nr
Match: gi|657963552|ref|XP_008373389.1| (PREDICTED: outer envelope pore protein 21B, chloroplastic-like [Malus domestica])

HSP 1 Score: 122.5 bits (306), Expect = 4.5e-25
Identity = 63/129 (48.84%), Postives = 78/129 (60.47%), Query Frame = 1 

Query: 1   METSLRCGGDSRALRIHAKEKIPLDSNIFLQLF-------------------------AS 60
           METSLR GGD++ALRIHAK+K+PLDS   LQ+                          AS
Sbjct: 1   METSLRYGGDAKALRIHAKQKLPLDSKTHLQVHGELDTRFGVPTFFRAVVRRFYPDFSAS 60

Query: 61  AGIGVQYDKYRKLQHFARGKMSFPVTTDGMLQFTIKGQSHHDKDFKQTNFKGAAEFSLGV 105
            G+G+QYDK  KL +  R K SFPVTTDG+  F +KG+ H DK+FK+ N  GAAEFS  +
Sbjct: 61  LGVGLQYDKREKLHYTVRAKKSFPVTTDGLFSFNVKGRCHLDKEFKERNSTGAAEFSWCI 120

[Close]
BLAST of CmoCh12G006240 vs. NCBI nr
Match: gi|147815140|emb|CAN59778.1| (hypothetical protein VITISV_024653 [Vitis vinifera])

HSP 1 Score: 121.7 bits (304), Expect = 7.6e-25
Identity = 61/129 (47.29%), Postives = 79/129 (61.24%), Query Frame = 1 

Query: 1   METSLRCGGDSRALRIHAKEKIPLDSNIFL-------------------------QLFAS 60
           METSLR GGD++ALRIHAKEK P+D    L                          L AS
Sbjct: 1   METSLRYGGDTKALRIHAKEKFPIDLKTHLLVRVELDTRIGAPSYVSAVIRHFYPDLSAS 60

Query: 61  AGIGVQYDKYRKLQHFARGKMSFPVTTDGMLQFTIKGQSHHDKDFKQTNFKGAAEFSLGV 105
            G+G+QYDK+ KL++  RGK +FPVTTDG+L F +KGQ   DK+F++   +GAAEFS  +
Sbjct: 61  LGVGLQYDKHEKLRYSVRGKKTFPVTTDGLLSFNVKGQCDVDKEFRERKSRGAAEFSWSI 120

[Close]
BLAST of CmoCh12G006240 vs. NCBI nr
Match: gi|225457620|ref|XP_002274272.1| (PREDICTED: outer envelope pore protein 21, chloroplastic [Vitis vinifera])

HSP 1 Score: 121.7 bits (304), Expect = 7.6e-25
Identity = 61/129 (47.29%), Postives = 79/129 (61.24%), Query Frame = 1 

Query: 1   METSLRCGGDSRALRIHAKEKIPLDSNIFL-------------------------QLFAS 60
           METSLR GGD++ALRIHAKEK P+D    L                          L AS
Sbjct: 1   METSLRYGGDTKALRIHAKEKFPIDLKTHLLVRGELDTRIGAPSYVSAVIRHFYPDLSAS 60

Query: 61  AGIGVQYDKYRKLQHFARGKMSFPVTTDGMLQFTIKGQSHHDKDFKQTNFKGAAEFSLGV 105
            G+G+QYDK+ KL++  RGK +FPVTTDG+L F +KGQ   DK+F++   +GAAEFS  +
Sbjct: 61  LGVGLQYDKHEKLRYSVRGKKTFPVTTDGLLSFNVKGQCDVDKEFRERKSRGAAEFSWSI 120

The following BLAST results are available for this feature:
BLAST of CmoCh12G006240 vs. Swiss-Prot
Match NameE-valueIdentityDescription
OEP21_PEA6.7e-2141.01Outer envelope pore protein 21, chloroplastic OS=Pisum sativum GN=OEP21 PE=1 SV=... [more]
OP21A_ARATH1.6e-1941.09Outer envelope pore protein 21A, chloroplastic OS=Arabidopsis thaliana GN=OEP21A... [more]
OP21B_ARATH9.0e-1837.21Outer envelope pore protein 21B, chloroplastic OS=Arabidopsis thaliana GN=OEP21B... [more]
BLAST of CmoCh12G006240 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KGQ0_CUCSA3.7e-3461.24Uncharacterized protein OS=Cucumis sativus GN=Csa_6G355410 PE=4 SV=1[more]
A5BH90_VITVI5.3e-2547.29Putative uncharacterized protein (Fragment) OS=Vitis vinifera GN=VITISV_024653 P... [more]
D7UDD6_VITVI5.3e-2547.29Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0122g00880 PE=4 SV=... [more]
A0A067HBU4_CITSI6.9e-2550.39Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g031023mg PE=4 SV=1[more]
V4T661_9ROSI6.9e-2550.39Uncharacterized protein OS=Citrus clementina GN=CICLE_v10002700mg PE=4 SV=1[more]
BLAST of CmoCh12G006240 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G20816.19.2e-2141.09 unknown protein[more]
AT1G76405.25.1e-1937.21 unknown protein[more]
BLAST of CmoCh12G006240 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659129746|ref|XP_008464824.1|6.2e-3562.79PREDICTED: outer envelope pore protein 21, chloroplastic [Cucumis melo][more]
gi|449453001|ref|XP_004144247.1|5.3e-3461.24PREDICTED: outer envelope pore protein 21, chloroplastic [Cucumis sativus][more]
gi|657963552|ref|XP_008373389.1|4.5e-2548.84PREDICTED: outer envelope pore protein 21B, chloroplastic-like [Malus domestica][more]
gi|147815140|emb|CAN59778.1|7.6e-2547.29hypothetical protein VITISV_024653 [Vitis vinifera][more]
gi|225457620|ref|XP_002274272.1|7.6e-2547.29PREDICTED: outer envelope pore protein 21, chloroplastic [Vitis vinifera][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0015698 inorganic anion transport
biological_process GO:0044070 regulation of anion transport
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
molecular_function GO:0008308 voltage-gated anion channel activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh12G006240.1CmoCh12G006240.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR35993FAMILY NOT NAMEDcoord: 2..104
score: 7.0

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmoCh12G006240Cucsa.077410Cucumber (Gy14) v1cgycmoB0126
CmoCh12G006240CmaCh12G006900Cucurbita maxima (Rimu)cmacmoB176
CmoCh12G006240Cla021920Watermelon (97103) v1cmowmB138
CmoCh12G006240Csa6G355410Cucumber (Chinese Long) v2cmocuB179
CmoCh12G006240MELO3C026523Melon (DHL92) v3.5.1cmomeB153
CmoCh12G006240ClCG08G009240Watermelon (Charleston Gray)cmowcgB166
CmoCh12G006240CSPI06G18480Wild cucumber (PI 183967)cmocpiB183
CmoCh12G006240Lsi08G007740Bottle gourd (USVL1VR-Ls)cmolsiB180
CmoCh12G006240Cp4.1LG11g07820Cucurbita pepo (Zucchini)cmocpeB155
CmoCh12G006240Cp4.1LG07g05860Cucurbita pepo (Zucchini)cmocpeB174
CmoCh12G006240MELO3C026523.2Melon (DHL92) v3.6.1cmomedB169
CmoCh12G006240CsaV3_6G031380Cucumber (Chinese Long) v3cmocucB0213
CmoCh12G006240Cla97C08G152070Watermelon (97103) v2cmowmbB183
CmoCh12G006240Bhi04G000963Wax gourdcmowgoB0207
CmoCh12G006240CsGy6G017980Cucumber (Gy14) v2cgybcmoB702
CmoCh12G006240Carg21890Silver-seed gourdcarcmoB0294
CmoCh12G006240Carg17637Silver-seed gourdcarcmoB0181
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CmoCh12G006240CmoCh05G009860Cucurbita moschata (Rifu)cmocmoB157
The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh12G006240Melon (DHL92) v3.6.1cmomedB189
CmoCh12G006240Silver-seed gourdcarcmoB0485
CmoCh12G006240Wax gourdcmowgoB0198
CmoCh12G006240Cucurbita moschata (Rifu)cmocmoB138
CmoCh12G006240Cucurbita maxima (Rimu)cmacmoB771
CmoCh12G006240Cucumber (Gy14) v2cgybcmoB450