Carg21890 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg21890
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	outer envelope pore protein 21, chloroplastic
Location	Cucurbita_argyrosperma_scaffold_111 : 228255 .. 231575 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGACACTTCTCTCAGATATGCCGGAGACTCCAGAGCCCTAAGAATCCACGCCAAGGAGAAGATTCCTCTCAACTCCAACACTTCCTTGGAGGTAATCCATTTCCTTCTCTAGCACTGCAACGAACCCTTTCTTTTACTTTTTCGTTCCCATTTTCGATTCTTGCCAGTTTCCGAAGTGTGCGCTTGGTAGGATTTGTTCTCCGGTATCACATTGATTCGGAACCGTATTTTGAAGCATTCTTTTACGCTGATTTAGAAGAAAATGGATTTTACTGTCCTTGGTTCTGACATAGTTGCATTTTCCTTTTCCTCTTCCTTGCTTTAAAGGTTCGTGGTGAGCTAGATACAAGAATTGGTGAACCGAGTCTACTCGCTGCTTCCGTGAGAAAATTTTACCCCGATGTAAGGTTTTCTTGGTAATCAATTCACTTTGTGGAAGTCTCTGTTTGGTATTTGTTACATTTTCTTCATGATTGTAAATCAAATGCAGTTGTTTTCAAGCGTCGGTTTTGGGGTGAAATATGACAAATATAAGAAACTTCATTATCTTGCTCGTGGGAAAGTGTCTCTTCCTGTGGCAAACGATGGTTTGTTGAAATTTACTATTAAAGGGCAATCTCAACTTGAAAATAATTTTAAGCAGGTTAGTGATGACTAATTGTATCTTGTGAACTTGATATTTTCTTTTGCTATTCTTTATGACCAATTTTGTTTCATTGTTTTCTTGGCAAATCAAGCACAAAGGAGCTGCTGAATTTTCTTTGGGTGTATTAAATTTTCTAAGAGAGCAAGATTCTTCGGGTGCATTAGATTTTGAAAGGGTGCAAGATATAAGAGTCAAAGTAGGATATGAAGTGTTCGAAAAGGTAGAGTTAATTTTCCTTTTTCTGCTTTATAGTCATCAGTTCAAATCATATTTCTTATCTTACATAAAATAACTATATTTTCATTCCATACTATATATTATTTGATTGTCTCTAGTTATCTCATGATTTAATTCTCTAGTAACTTTATGTGAAATCCCATATCGGTTGGGGAGGTTAACAAAAGATTCTTTATAAGGGTGTGGAAACCTCTCCCTAGGAGATGCATTTTAAAAACCTTGAGGGGAAGCTCGAAAGGAAAAGTGCAAAGAAGACAATATCTGCTACCAGTGGGCTTGGACTGTTACAAATGGTATCAGAGCCAGACGTTGGGCAATGTGCTAGTGAGGAGGCTAAGCCTCGAAGGGGGTGGATTGGAGGGTCCTACATCAATTGAAGAAGGGAACGAGTGCTAGCGAGGACGATGGGTCCTGAAGGGGGTGGATTGTGAGATCCCATATCGGTTGGGGAAAGCCTAAAGAGGACAATATCTGCTAGCAGTAGACTTGGGCCGTTACACCTTCACAGAGAAAAAAAAAAAGTCAAAACAATTCCAAAAAGAGATTAGAAGTTCTCTTTTAATATCCTCCTTGTCTTAGTCCTTCTTCCTTGGTAGTTGGTAGTGAACCTATGAATGAAATGTTGGCTTCCGAGGCCTTGAGGCAAGGAACCCTCTGTCTCTTTTTTCTCTTTTTCCACTTCGGCACTTGATTTGGCTTAGATGGCTGTTGTACTAGGGCATGACTTCCAATTTGATTAAAAACGCCTTGCAATGTACCTTGTCAAAAGTATTAATACCACTGTGGACTACAGATCACAGAAAATACTTGACTCTCTTAGGAGCTATTCTTCTCCAAATGGCCGTACTAAGCGCTTTCGTCAACAACCTTTTTTCTAGCTATGATAAGCAGATTTGACCAAATAGGAACCATCAGCTTCCAGACTCAATCATAATTGCCTTGAGTCGCTTTTATACTCTCCAACCAAACAGAAAGATTGACCCACTCCTCTATCTCTCCCTCAAACTAACCTCTTCTCAGCCTTAAGTCCCAACCACCATCTGCTAGGTTCTCCAGCTACTGGAATTTGCTTGATTTAGCATTTGAAATACTAAAAATCGAAGGGAACATGAACCTTAAAGGTGGAATACCAGTTTATCTATCTTCCCAGATTAGAATATCTTTCCCTTGTACTCGAGGATTAAAATATAGATATTGATATGAATTGAGATTTCAATCTTACGGATATATCGATATATTGTTATAGATGAACATTCTTGTAAATGAAGAAATTTTAAAAATTATTAATTAATAAGATGGTTACTTCCAAACTTAGTTATAGATCTTGTTATTGGTATTCGTATTCATATTGGGATTAATAAATGATATTTATTGTGTTTTATGTGTAATTATAAAAGATATCTGAGATATTGATTAATCCACATATACTTCAATCCTTGCTGGATCCCACCTTATCACTAACATTTTGCCAAAAAGGGTGTTTTATCTCGAATGATTTCAGTGTGTTCCTTTGAGCAGTCTGGACTGTGTGGAATATAAGAATTCTTCACGAGGTTGAATCCTCGCTGGAGTCCATTCCATTTCCTGGATCTTAATTCTTCACGAACATAAGAATATGTTTAGCACTTTGTTTTTTTAAGCTTAGTTTTGGAGTTTATTTCCTAATGGTGTGTTCTTTCTTCCTCACCTTTGTTAGTTAAAGTTGCCTATGGTTATATATCATCCCCGACATGATAGCTTTACACACATCACATTATTAAGCAATTATTGTTCTGTCCTGCATTGTACTATACTGAGCTTTTCACTTTTATTCCATCACTTTCATACAGACACCATACATTCAGATCAGGGAAAATAATTGGACACTGAATGCAGACCTCAAGGGTAGATGGAATGTCAGATTCGACCTGTGAGAAGCTTTGGTTGAACTTCCTTCACAAACACAGTTTCAGCCGCTGAATTCCTCTCTCAGATATGTACTTAACCATCATATCTATTGTTTTTATTCTAATTTGCATTGTCTCAACAATATTCTGAAGAATTTAAGTGTATTTATCATTCCATTTTAGAAAATTTTGATGCTAGAATACACCCTTTTATTAGCTACAACTATTTGTTCACTTCAAAATTAAGAGGGGGGAAAAAAAAAAACAGCTTATAAGAATCTAAGCTAATCACAATCTCCAATACATTGGGGTACATAAAGAGTACATAAACTTGAACCAAAATTCAAAATAGGAAAAGAATTTGTGCTTGCTACGCATTCTTTGTGTTCATACTTCCTTTAATGCAGCAAGAACAGATGAAGTTTCTGTAGGGAGTCAAGACTGCCAAACTCAATTAGTAGCACCTTTAGCAGCTTGTCTTGCACCAACGGAGAAGAACTCGGCGATAACCTCGAGTGGCATTCCTTTGGTTTCTGGGACTTTCAAGTAG

mRNA sequence

ATGGACACTTCTCTCAGATATGCCGGAGACTCCAGAGCCCTAAGAATCCACGCCAAGGAGAAGATTCCTCTCAACTCCAACACTTCCTTGGAGGTTCGTGGTGAGCTAGATACAAGAATTGGTGAACCGAGTCTACTCGCTGCTTCCGTGAGAAAATTTTACCCCGATTTGTTTTCAAGCGTCGGTTTTGGGGTGAAATATGACAAATATAAGAAACTTCATTATCTTGCTCGTGGGAAAGTGTCTCTTCCTGTGGCAAACGATGGTTTGTTGAAATTTACTATTAAAGGGCAATCTCAACTTGAAAATAATTTTAAGCAGCACAAAGGAGCTGCTGAATTTTCTTTGGGTGTATTAAATTTTCTAAGAGAGCAAGATTCTTCGGGTGCATTAGATTTTGAAAGGGTGCAAGATATAAGAGTCAAAGTAGGATATGAAGTGTTCGAAAAGACACCATACATTCAGATCAGGGAAAATAATTGGACACTGAATGCAGACCTCAAGGCAAGAACAGATGAAGTTTCTGTAGGGAGTCAAGACTGCCAAACTCAATTAGTAGCACCTTTAGCAGCTTGTCTTGCACCAACGGAGAAGAACTCGGCGATAACCTCGAGTGGCATTCCTTTGGTTTCTGGGACTTTCAAGTAG

Coding sequence (CDS)

ATGGACACTTCTCTCAGATATGCCGGAGACTCCAGAGCCCTAAGAATCCACGCCAAGGAGAAGATTCCTCTCAACTCCAACACTTCCTTGGAGGTTCGTGGTGAGCTAGATACAAGAATTGGTGAACCGAGTCTACTCGCTGCTTCCGTGAGAAAATTTTACCCCGATTTGTTTTCAAGCGTCGGTTTTGGGGTGAAATATGACAAATATAAGAAACTTCATTATCTTGCTCGTGGGAAAGTGTCTCTTCCTGTGGCAAACGATGGTTTGTTGAAATTTACTATTAAAGGGCAATCTCAACTTGAAAATAATTTTAAGCAGCACAAAGGAGCTGCTGAATTTTCTTTGGGTGTATTAAATTTTCTAAGAGAGCAAGATTCTTCGGGTGCATTAGATTTTGAAAGGGTGCAAGATATAAGAGTCAAAGTAGGATATGAAGTGTTCGAAAAGACACCATACATTCAGATCAGGGAAAATAATTGGACACTGAATGCAGACCTCAAGGCAAGAACAGATGAAGTTTCTGTAGGGAGTCAAGACTGCCAAACTCAATTAGTAGCACCTTTAGCAGCTTGTCTTGCACCAACGGAGAAGAACTCGGCGATAACCTCGAGTGGCATTCCTTTGGTTTCTGGGACTTTCAAGTAG

Protein sequence

MDTSLRYAGDSRALRIHAKEKIPLNSNTSLEVRGELDTRIGEPSLLAASVRKFYPDLFSSVGFGVKYDKYKKLHYLARGKVSLPVANDGLLKFTIKGQSQLENNFKQHKGAAEFSLGVLNFLREQDSSGALDFERVQDIRVKVGYEVFEKTPYIQIRENNWTLNADLKARTDEVSVGSQDCQTQLVAPLAACLAPTEKNSAITSSGIPLVSGTFK

Homology

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BLAST of Carg21890 vs. NCBI nr
Match: XP_022999770.1 (outer envelope pore protein 21, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 333.6 bits (854), Expect = 5.1e-88
Identity = 164/170 (96.47%), Postives = 168/170 (98.82%), Query Frame = 0


Query: 1   MDTSLRYAGDSRALRIHAKEKIPLNSNTSLEVRGELDTRIGEPSLLAASVRKFYPDLFSS 60
           MDTSLRYAGDSRALRIHAKEKIPLNSNTSLE+RGELDTRIGEPSLL+ASVRKFYPDLFSS
Sbjct: 1   MDTSLRYAGDSRALRIHAKEKIPLNSNTSLELRGELDTRIGEPSLLSASVRKFYPDLFSS 60

Query: 61  VGFGVKYDKYKKLHYLARGKVSLPVANDGLLKFTIKGQSQLENNFKQHKGAAEFSLGVLN 120
           VGFGVKYDKYKKLHYLARGK+SLPVANDGLLKFTIKGQS LENNFKQHKGAAEFSLGVLN
Sbjct: 61  VGFGVKYDKYKKLHYLARGKMSLPVANDGLLKFTIKGQSHLENNFKQHKGAAEFSLGVLN 120

Query: 121 FLREQDSSGALDFERVQDIRVKVGYEVFEKTPYIQIRENNWTLNADLKAR 171
           FLREQDSSGALDFERVQD+RVKVGYEVFEKTPYIQIRENNWTLNADLK R
Sbjct: 121 FLREQDSSGALDFERVQDVRVKVGYEVFEKTPYIQIRENNWTLNADLKGR 170

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BLAST of Carg21890 vs. NCBI nr
Match: XP_022946381.1 (outer envelope pore protein 21, chloroplastic-like [Cucurbita moschata])

HSP 1 Score: 332.0 bits (850), Expect = 1.5e-87
Identity = 166/170 (97.65%), Postives = 166/170 (97.65%), Query Frame = 0


Query: 1   MDTSLRYAGDSRALRIHAKEKIPLNSNTSLEVRGELDTRIGEPSLLAASVRKFYPDLFSS 60
           MDTSLRYAGDSRAL IHAKEKIPLNSNT LEVRGELDTRIGEPSLLAASVRKFYPDLFSS
Sbjct: 1   MDTSLRYAGDSRALGIHAKEKIPLNSNTFLEVRGELDTRIGEPSLLAASVRKFYPDLFSS 60

Query: 61  VGFGVKYDKYKKLHYLARGKVSLPVANDGLLKFTIKGQSQLENNFKQHKGAAEFSLGVLN 120
           V FGVKYDKYKKLHYLARGKVSLPVANDGLLKFTIKGQSQLENNFKQHKGAAEFSLGVLN
Sbjct: 61  VSFGVKYDKYKKLHYLARGKVSLPVANDGLLKFTIKGQSQLENNFKQHKGAAEFSLGVLN 120

Query: 121 FLREQDSSGALDFERVQDIRVKVGYEVFEKTPYIQIRENNWTLNADLKAR 171
           FLREQDSSGALDFERVQDIRVKVGYEVFEKTPYIQIRENNWTLNADLK R
Sbjct: 121 FLREQDSSGALDFERVQDIRVKVGYEVFEKTPYIQIRENNWTLNADLKGR 170

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BLAST of Carg21890 vs. NCBI nr
Match: XP_023522432.1 (outer envelope pore protein 21, chloroplastic-like [Cucurbita pepo subsp. pepo] >XP_023546048.1 outer envelope pore protein 21, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 332.0 bits (850), Expect = 1.5e-87
Identity = 165/170 (97.06%), Postives = 167/170 (98.24%), Query Frame = 0


Query: 1   MDTSLRYAGDSRALRIHAKEKIPLNSNTSLEVRGELDTRIGEPSLLAASVRKFYPDLFSS 60
           MDTSLRYAGDSRALRIHAKEKIPLNSNT LEVRGELDTRIGEPSLLAASVRKFYPDLFSS
Sbjct: 1   MDTSLRYAGDSRALRIHAKEKIPLNSNTFLEVRGELDTRIGEPSLLAASVRKFYPDLFSS 60

Query: 61  VGFGVKYDKYKKLHYLARGKVSLPVANDGLLKFTIKGQSQLENNFKQHKGAAEFSLGVLN 120
           VGFGVKYDKYKKLHYLARGK+SLPVANDGLLKFTIKGQS LE+NFKQHKGAAEFSLGVLN
Sbjct: 61  VGFGVKYDKYKKLHYLARGKMSLPVANDGLLKFTIKGQSHLESNFKQHKGAAEFSLGVLN 120

Query: 121 FLREQDSSGALDFERVQDIRVKVGYEVFEKTPYIQIRENNWTLNADLKAR 171
           FLREQDSSGALDFERVQDIRVKVGYEVFEKTPYIQIRENNWTLNADLK R
Sbjct: 121 FLREQDSSGALDFERVQDIRVKVGYEVFEKTPYIQIRENNWTLNADLKGR 170

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BLAST of Carg21890 vs. NCBI nr
Match: XP_004144247.1 (PREDICTED: outer envelope pore protein 21, chloroplastic [Cucumis sativus] >KGN47522.1 hypothetical protein Csa_6G355410 [Cucumis sativus])

HSP 1 Score: 249.2 bits (635), Expect = 1.3e-62
Identity = 127/172 (73.84%), Postives = 140/172 (81.40%), Query Frame = 0


Query: 1   MDTSLRYAGDSRALRIHAKEKIPLNSNTSLEVRGELDTRIGEPSLLAASVRKFYPDLFSS 60
           MDTS RYA DSRALRIHAKEKI L+SN  L+VRGELDTRIGEPSLLAASVR+FYPDL +S
Sbjct: 1   MDTSFRYAADSRALRIHAKEKISLDSNVFLQVRGELDTRIGEPSLLAASVRQFYPDLSAS 60

Query: 61  VGFGVKYDKYKKLHYLARGKVSLPVANDGLLKFTIKGQSQLENNFKQ--HKGAAEFSLGV 120
            G GV+YDKYKKLHY+ RGK+S PV  DGLL+FTIKGQS L+ +FKQ  +KGAAEFSLGV
Sbjct: 61  AGLGVQYDKYKKLHYVGRGKMSFPVTTDGLLRFTIKGQSHLDKDFKQFKYKGAAEFSLGV 120

Query: 121 LNFLREQDSSGALDFERVQDIRVKVGYEVFEKTPYIQIRENNWTLNADLKAR 171
           LNF RE            QD+RVKVGYEVFEK PYIQIRENNWTLNAD+  R
Sbjct: 121 LNFQRE------------QDVRVKVGYEVFEKIPYIQIRENNWTLNADINGR 160

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BLAST of Carg21890 vs. NCBI nr
Match: XP_008464824.1 (PREDICTED: outer envelope pore protein 21, chloroplastic [Cucumis melo])

HSP 1 Score: 244.2 bits (622), Expect = 4.0e-61
Identity = 125/172 (72.67%), Postives = 139/172 (80.81%), Query Frame = 0


Query: 1   MDTSLRYAGDSRALRIHAKEKIPLNSNTSLEVRGELDTRIGEPSLLAASVRKFYPDLFSS 60
           MDTS RYAGDSRALRIHAKEKI L+SN  L+VRGELDTRIGEPSLLAASVR+F  DL +S
Sbjct: 1   MDTSFRYAGDSRALRIHAKEKISLDSNIFLQVRGELDTRIGEPSLLAASVRQFNQDLSAS 60

Query: 61  VGFGVKYDKYKKLHYLARGKVSLPVANDGLLKFTIKGQSQLENNFKQ--HKGAAEFSLGV 120
            G GV+YDKYKKLHY+ RGK+S PV  DGLL+FTIKGQS L+ +FKQ  +KGAAEFSLGV
Sbjct: 61  AGLGVQYDKYKKLHYVGRGKMSFPVTTDGLLRFTIKGQSHLDKDFKQIKYKGAAEFSLGV 120

Query: 121 LNFLREQDSSGALDFERVQDIRVKVGYEVFEKTPYIQIRENNWTLNADLKAR 171
           LNF RE            QD+RVKVGYEVFEK PY+QIRENNWTLNAD+  R
Sbjct: 121 LNFQRE------------QDVRVKVGYEVFEKIPYVQIRENNWTLNADINGR 160

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BLAST of Carg21890 vs. TAIR10
Match: AT1G76405.2 (unknown protein)

HSP 1 Score: 169.1 bits (427), Expect = 3.0e-42
Identity = 81/172 (47.09%), Postives = 115/172 (66.86%), Query Frame = 0


Query: 1   MDTSLRYAGDSRALRIHAKEKIPLNSNTSLEVRGELDTRIGEPSLLAASVRKFYPDLFSS 60
           M+TS+RY  +S++++IHAKEK+P+NS T L++ GELDT  G PS   A +R F+P+  + 
Sbjct: 1   METSMRYTSNSKSMKIHAKEKVPVNSKTHLQLHGELDTGTGAPSYFCAMIRHFFPEASTG 60

Query: 61  VGFGVKYDKYKKLHYLARGKVSLPVANDGLLKFTIKGQSQLEN--NFKQHKGAAEFSLGV 120
           +G G+ YDK +KL  L RGK   PV  D  + F IKG+  ++   N K  KGAAEF+  +
Sbjct: 61  LGVGLHYDKRQKLRCLVRGKKEFPVRADKRVTFNIKGRCDIDQDLNQKNPKGAAEFAWNI 120

Query: 121 LNFLREQDSSGALDFERVQDIRVKVGYEVFEKTPYIQIRENNWTLNADLKAR 171
                       +DF+  QD+R+KVGYE+F+K PY+QIRENNWTLNA++K +
Sbjct: 121 ------------MDFKEDQDVRIKVGYEMFDKVPYMQIRENNWTLNANMKGK 160

[Close]

BLAST of Carg21890 vs. TAIR10
Match: AT1G20816.1 (unknown protein)

HSP 1 Score: 161.4 bits (407), Expect = 6.3e-40
Identity = 80/172 (46.51%), Postives = 111/172 (64.53%), Query Frame = 0


Query: 1   MDTSLRYAGDSRALRIHAKEKIPLNSNTSLEVRGELDTRIGEPSLLAASVRKFYPDLFSS 60
           M+TSLRYA +SR+L+IHAKEK P+NS T L++ GELDT  G PS   A +R F+ +  ++
Sbjct: 1   METSLRYATNSRSLKIHAKEKFPVNSKTRLQLHGELDTGAGVPSYFCAMIRYFFHEASTN 60

Query: 61  VGFGVKYDKYKKLHYLARGKVSLPVANDGLLKFTIKGQSQLENNFKQH--KGAAEFSLGV 120
           +G G+ YDK +KL  L RGK   PV  D ++ F IKG+   + +  Q   KGAAEF   +
Sbjct: 61  LGVGLHYDKREKLRCLVRGKKKFPVITDEVVTFNIKGRCDFDQDLVQRNAKGAAEFDWNI 120

Query: 121 LNFLREQDSSGALDFERVQDIRVKVGYEVFEKTPYIQIRENNWTLNADLKAR 171
             F ++            QD+R+++GYE+FEK PY+QIRENNWT N +LK +
Sbjct: 121 WKFQKD------------QDLRLRIGYEMFEKVPYMQIRENNWTFNTNLKGK 160

[Close]

BLAST of Carg21890 vs. Swiss-Prot
Match: sp|Q9SM57|OEP21_PEA (Outer envelope pore protein 21, chloroplastic OS=Pisum sativum OX=3888 GN=OEP21 PE=1 SV=1)

HSP 1 Score: 169.9 bits (429), Expect = 3.2e-41
Identity = 86/182 (47.25%), Postives = 117/182 (64.29%), Query Frame = 0


Query: 1   MDTSLRYAGDSRALRIHAKEKIPLNSNTSLEVRGELDTRIGEPSLLAASVRKFYPDLFSS 60
           M+TSLRY GDS+AL+IHAKEK+ +++NT  +VRG LDT+ G+PS  +A +R FYP+  ++
Sbjct: 1   METSLRYGGDSKALKIHAKEKLRIDTNTFFQVRGGLDTKTGQPSSGSALIRHFYPNFSAT 60

Query: 61  VGFGVKYDKYKK----------LHYLARGKVSLPVANDGLLKFTIKGQSQLENNFKQHK- 120
           +G GV+YDK             L Y    K + PV NDGL+ F IKG   ++ +FK+ K 
Sbjct: 61  LGVGVRYDKQDSXXXXXXXXXXLRYTVLAKKTFPVTNDGLVNFKIKGGCDVDQDFKEWKS 120

Query: 121 -GAAEFSLGVLNFLREQDSSGALDFERVQDIRVKVGYEVFEKTPYIQIRENNWTLNADLK 171
            G AEFS  V NF ++            QD+R+++GYE FE+ PY+QIRENNWT NAD K
Sbjct: 121 RGGAEFSWNVFNFQKD------------QDVRLRIGYEAFEQVPYLQIRENNWTFNADYK 170

[Close]

BLAST of Carg21890 vs. Swiss-Prot
Match: sp|Q9FPG2|OP21B_ARATH (Outer envelope pore protein 21B, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=OEP21B PE=2 SV=1)

HSP 1 Score: 169.1 bits (427), Expect = 5.4e-41
Identity = 81/172 (47.09%), Postives = 115/172 (66.86%), Query Frame = 0


Query: 1   MDTSLRYAGDSRALRIHAKEKIPLNSNTSLEVRGELDTRIGEPSLLAASVRKFYPDLFSS 60
           M+TS+RY  +S++++IHAKEK+P+NS T L++ GELDT  G PS   A +R F+P+  + 
Sbjct: 1   METSMRYTSNSKSMKIHAKEKVPVNSKTHLQLHGELDTGTGAPSYFCAMIRHFFPEASTG 60

Query: 61  VGFGVKYDKYKKLHYLARGKVSLPVANDGLLKFTIKGQSQLEN--NFKQHKGAAEFSLGV 120
           +G G+ YDK +KL  L RGK   PV  D  + F IKG+  ++   N K  KGAAEF+  +
Sbjct: 61  LGVGLHYDKRQKLRCLVRGKKEFPVRADKRVTFNIKGRCDIDQDLNQKNPKGAAEFAWNI 120

Query: 121 LNFLREQDSSGALDFERVQDIRVKVGYEVFEKTPYIQIRENNWTLNADLKAR 171
                       +DF+  QD+R+KVGYE+F+K PY+QIRENNWTLNA++K +
Sbjct: 121 ------------MDFKEDQDVRIKVGYEMFDKVPYMQIRENNWTLNANMKGK 160

[Close]

BLAST of Carg21890 vs. Swiss-Prot
Match: sp|Q6ID99|OP21A_ARATH (Outer envelope pore protein 21A, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=OEP21A PE=2 SV=1)

HSP 1 Score: 161.4 bits (407), Expect = 1.1e-38
Identity = 80/172 (46.51%), Postives = 111/172 (64.53%), Query Frame = 0


Query: 1   MDTSLRYAGDSRALRIHAKEKIPLNSNTSLEVRGELDTRIGEPSLLAASVRKFYPDLFSS 60
           M+TSLRYA +SR+L+IHAKEK P+NS T L++ GELDT  G PS   A +R F+ +  ++
Sbjct: 1   METSLRYATNSRSLKIHAKEKFPVNSKTRLQLHGELDTGAGVPSYFCAMIRYFFHEASTN 60

Query: 61  VGFGVKYDKYKKLHYLARGKVSLPVANDGLLKFTIKGQSQLENNFKQH--KGAAEFSLGV 120
           +G G+ YDK +KL  L RGK   PV  D ++ F IKG+   + +  Q   KGAAEF   +
Sbjct: 61  LGVGLHYDKREKLRCLVRGKKKFPVITDEVVTFNIKGRCDFDQDLVQRNAKGAAEFDWNI 120

Query: 121 LNFLREQDSSGALDFERVQDIRVKVGYEVFEKTPYIQIRENNWTLNADLKAR 171
             F ++            QD+R+++GYE+FEK PY+QIRENNWT N +LK +
Sbjct: 121 WKFQKD------------QDLRLRIGYEMFEKVPYMQIRENNWTFNTNLKGK 160

[Close]

BLAST of Carg21890 vs. Swiss-Prot
Match: sp|B8AFI8|OEP21_ORYSI (Outer envelope pore protein 21, chloroplastic OS=Oryza sativa subsp. indica OX=39946 GN=OEP21 PE=3 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 9.6e-22
Identity = 64/192 (33.33%), Postives = 93/192 (48.44%), Query Frame = 0


Query: 1   MDTSLRYAG--------DSRALRIHAKEKIPLNSNTSLEVRGELDTRIGEPSLLAASVRK 60
           M+TSLR  G            LRIHAKEK+P+ SN  L+  GE+    G P+ LA   R 
Sbjct: 1   METSLRLRGGGSRPQSKSQEGLRIHAKEKLPIASNALLQAHGEIHAATGAPTYLALLFRN 60

Query: 61  FYPDLFSSVGFG------------VKYDKYKKLHYLARGKVSLPVANDGLLKFTIKGQSQ 120
           FYP L +++G G            + +D +   + L   K  +P  ++ LL   +KG+  
Sbjct: 61  FYPRLSANLGLGLAIHFRNNQPLPLAWDNFS--YTLRASKAIIPFPSNALLGINLKGRLL 120

Query: 121 LENNFKQHKGAAEFSLGVLNFLREQDSSGALDFERVQDIRVKVGYEVFEKTPYIQIRENN 173
            +  F      A   L          +   LD +R QD+R+K+GY++  K PY Q+RENN
Sbjct: 121 ADKYFNPTTRTAAVEL----------AWTILDLKRGQDVRLKLGYQLLHKMPYFQLRENN 180

[Close]

BLAST of Carg21890 vs. Swiss-Prot
Match: sp|Q6K965|OEP21_ORYSJ (Outer envelope pore protein 21, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=OEP21 PE=2 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 9.6e-22
Identity = 64/192 (33.33%), Postives = 93/192 (48.44%), Query Frame = 0


Query: 1   MDTSLRYAG--------DSRALRIHAKEKIPLNSNTSLEVRGELDTRIGEPSLLAASVRK 60
           M+TSLR  G            LRIHAKEK+P+ SN  L+  GE+    G P+ LA   R 
Sbjct: 1   METSLRLRGGGSRPQSKSQEGLRIHAKEKLPIASNALLQAHGEIHAATGAPTYLALLFRN 60

Query: 61  FYPDLFSSVGFG------------VKYDKYKKLHYLARGKVSLPVANDGLLKFTIKGQSQ 120
           FYP L +++G G            + +D +   + L   K  +P  ++ LL   +KG+  
Sbjct: 61  FYPRLSANLGLGLAIHFRNNQPLPLAWDNFS--YTLRASKAIIPFPSNALLGINLKGRLL 120

Query: 121 LENNFKQHKGAAEFSLGVLNFLREQDSSGALDFERVQDIRVKVGYEVFEKTPYIQIRENN 173
            +  F      A   L          +   LD +R QD+R+K+GY++  K PY Q+RENN
Sbjct: 121 ADKYFNPTARTAAVEL----------AWTILDLKRGQDVRLKLGYQLLHKMPYFQLRENN 180

[Close]

BLAST of Carg21890 vs. TrEMBL
Match: tr|A0A0A0KGQ0|A0A0A0KGQ0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G355410 PE=4 SV=1)

HSP 1 Score: 249.2 bits (635), Expect = 8.3e-63
Identity = 127/172 (73.84%), Postives = 140/172 (81.40%), Query Frame = 0


Query: 1   MDTSLRYAGDSRALRIHAKEKIPLNSNTSLEVRGELDTRIGEPSLLAASVRKFYPDLFSS 60
           MDTS RYA DSRALRIHAKEKI L+SN  L+VRGELDTRIGEPSLLAASVR+FYPDL +S
Sbjct: 1   MDTSFRYAADSRALRIHAKEKISLDSNVFLQVRGELDTRIGEPSLLAASVRQFYPDLSAS 60

Query: 61  VGFGVKYDKYKKLHYLARGKVSLPVANDGLLKFTIKGQSQLENNFKQ--HKGAAEFSLGV 120
            G GV+YDKYKKLHY+ RGK+S PV  DGLL+FTIKGQS L+ +FKQ  +KGAAEFSLGV
Sbjct: 61  AGLGVQYDKYKKLHYVGRGKMSFPVTTDGLLRFTIKGQSHLDKDFKQFKYKGAAEFSLGV 120

Query: 121 LNFLREQDSSGALDFERVQDIRVKVGYEVFEKTPYIQIRENNWTLNADLKAR 171
           LNF RE            QD+RVKVGYEVFEK PYIQIRENNWTLNAD+  R
Sbjct: 121 LNFQRE------------QDVRVKVGYEVFEKIPYIQIRENNWTLNADINGR 160

[Close]

BLAST of Carg21890 vs. TrEMBL
Match: tr|A0A1S3CMW4|A0A1S3CMW4_CUCME (outer envelope pore protein 21, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103502611 PE=4 SV=1)

HSP 1 Score: 244.2 bits (622), Expect = 2.7e-61
Identity = 125/172 (72.67%), Postives = 139/172 (80.81%), Query Frame = 0


Query: 1   MDTSLRYAGDSRALRIHAKEKIPLNSNTSLEVRGELDTRIGEPSLLAASVRKFYPDLFSS 60
           MDTS RYAGDSRALRIHAKEKI L+SN  L+VRGELDTRIGEPSLLAASVR+F  DL +S
Sbjct: 1   MDTSFRYAGDSRALRIHAKEKISLDSNIFLQVRGELDTRIGEPSLLAASVRQFNQDLSAS 60

Query: 61  VGFGVKYDKYKKLHYLARGKVSLPVANDGLLKFTIKGQSQLENNFKQ--HKGAAEFSLGV 120
            G GV+YDKYKKLHY+ RGK+S PV  DGLL+FTIKGQS L+ +FKQ  +KGAAEFSLGV
Sbjct: 61  AGLGVQYDKYKKLHYVGRGKMSFPVTTDGLLRFTIKGQSHLDKDFKQIKYKGAAEFSLGV 120

Query: 121 LNFLREQDSSGALDFERVQDIRVKVGYEVFEKTPYIQIRENNWTLNADLKAR 171
           LNF RE            QD+RVKVGYEVFEK PY+QIRENNWTLNAD+  R
Sbjct: 121 LNFQRE------------QDVRVKVGYEVFEKIPYVQIRENNWTLNADINGR 160

[Close]

BLAST of Carg21890 vs. TrEMBL
Match: tr|D7UDD6|D7UDD6_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_18s0122g00880 PE=4 SV=1)

HSP 1 Score: 203.8 bits (517), Expect = 4.0e-49
Identity = 98/172 (56.98%), Postives = 125/172 (72.67%), Query Frame = 0


Query: 1   MDTSLRYAGDSRALRIHAKEKIPLNSNTSLEVRGELDTRIGEPSLLAASVRKFYPDLFSS 60
           M+TSLRY GD++ALRIHAKEK P++  T L VRGELDTRIG PS ++A +R FYPDL +S
Sbjct: 1   METSLRYGGDTKALRIHAKEKFPIDLKTHLLVRGELDTRIGAPSYVSAVIRHFYPDLSAS 60

Query: 61  VGFGVKYDKYKKLHYLARGKVSLPVANDGLLKFTIKGQSQLENNFKQHK--GAAEFSLGV 120
           +G G++YDK++KL Y  RGK + PV  DGLL F +KGQ  ++  F++ K  GAAEFS  +
Sbjct: 61  LGVGLQYDKHEKLRYSVRGKKTFPVTTDGLLSFNVKGQCDVDKEFRERKSRGAAEFSWSI 120

Query: 121 LNFLREQDSSGALDFERVQDIRVKVGYEVFEKTPYIQIRENNWTLNADLKAR 171
            NF R+            QD+R+KVGYEVF+K PY+QIRENNWTLNAD+  R
Sbjct: 121 FNFQRD------------QDVRIKVGYEVFDKVPYLQIRENNWTLNADINGR 160

[Close]

BLAST of Carg21890 vs. TrEMBL
Match: tr|A0A1Q3BCT2|A0A1Q3BCT2_CEPFO (Uncharacterized protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_09360 PE=4 SV=1)

HSP 1 Score: 200.3 bits (508), Expect = 4.4e-48
Identity = 97/172 (56.40%), Postives = 125/172 (72.67%), Query Frame = 0


Query: 1   MDTSLRYAGDSRALRIHAKEKIPLNSNTSLEVRGELDTRIGEPSLLAASVRKFYPDLFSS 60
           M+TSLR+AGDSRAL+IHAKEKIP++S T L+V GELDTR G PS  +A +R FYPDL +S
Sbjct: 1   METSLRFAGDSRALKIHAKEKIPVDSKTHLQVHGELDTRYGVPSYFSAMIRHFYPDLSAS 60

Query: 61  VGFGVKYDKYKKLHYLARGKVSLPVANDGLLKFTIKGQSQLENNFKQHK--GAAEFSLGV 120
           +G G+ YDK++KL +  RGK + PV++DGL  F IKG+   +  FK+ K  GAAEFS  +
Sbjct: 61  LGVGLHYDKHEKLRFFVRGKKAFPVSSDGLFNFNIKGRCHTDQEFKEKKSRGAAEFSWSI 120

Query: 121 LNFLREQDSSGALDFERVQDIRVKVGYEVFEKTPYIQIRENNWTLNADLKAR 171
           LNF R+            QD+R K+GYEVF+K PY+QIRENNWTLNAD+  +
Sbjct: 121 LNFQRD------------QDVRFKLGYEVFDKVPYLQIRENNWTLNADMNGK 160

[Close]

BLAST of Carg21890 vs. TrEMBL
Match: tr|A0A2R6PZ92|A0A2R6PZ92_ACTCH (Outer envelope pore protein like OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc23467 PE=4 SV=1)

HSP 1 Score: 199.1 bits (505), Expect = 9.9e-48
Identity = 94/172 (54.65%), Postives = 127/172 (73.84%), Query Frame = 0


Query: 1   MDTSLRYAGDSRALRIHAKEKIPLNSNTSLEVRGELDTRIGEPSLLAASVRKFYPDLFSS 60
           MDTS+RY  DS ALRIHAKEK P++SNT L+V GELDT+IG PS L+A +R FYPDL +S
Sbjct: 1   MDTSIRYGADSTALRIHAKEKFPIDSNTHLQVHGELDTKIGAPSYLSAMIRHFYPDLSAS 60

Query: 61  VGFGVKYDKYKKLHYLARGKVSLPVANDGLLKFTIKGQSQLENNFKQH--KGAAEFSLGV 120
           +G G++Y++++K+ Y  RGK + PV  +GLL+F IKG+  ++  F++   KGAAEF+ G+
Sbjct: 61  LGVGLQYNRHEKVRYSVRGKTAFPVTTNGLLQFNIKGRCDVDKEFRERKLKGAAEFTWGI 120

Query: 121 LNFLREQDSSGALDFERVQDIRVKVGYEVFEKTPYIQIRENNWTLNADLKAR 171
                       LDF++ QD+R+KVGYEVF+K PY+QIRENNWTLN D+  R
Sbjct: 121 ------------LDFQKDQDMRLKVGYEVFDKVPYLQIRENNWTLNVDINGR 160

The following BLAST results are available for this feature:

BLAST of Carg21890 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022999770.1	5.1e-88	96.47	outer envelope pore protein 21, chloroplastic-like [Cucurbita maxima]	[more]
XP_022946381.1	1.5e-87	97.65	outer envelope pore protein 21, chloroplastic-like [Cucurbita moschata]	[more]
XP_023522432.1	1.5e-87	97.06	outer envelope pore protein 21, chloroplastic-like [Cucurbita pepo subsp. pepo] ...	[more]
XP_004144247.1	1.3e-62	73.84	PREDICTED: outer envelope pore protein 21, chloroplastic [Cucumis sativus] >KGN4...	[more]
XP_008464824.1	4.0e-61	72.67	PREDICTED: outer envelope pore protein 21, chloroplastic [Cucumis melo]	[more]

BLAST of Carg21890 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G76405.2	3.0e-42	47.09	unknown protein	[more]
AT1G20816.1	6.3e-40	46.51	unknown protein	[more]

BLAST of Carg21890 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9SM57\|OEP21_PEA	3.2e-41	47.25	Outer envelope pore protein 21, chloroplastic OS=Pisum sativum OX=3888 GN=OEP21 ...	[more]
sp\|Q9FPG2\|OP21B_ARATH	5.4e-41	47.09	Outer envelope pore protein 21B, chloroplastic OS=Arabidopsis thaliana OX=3702 G...	[more]
sp\|Q6ID99\|OP21A_ARATH	1.1e-38	46.51	Outer envelope pore protein 21A, chloroplastic OS=Arabidopsis thaliana OX=3702 G...	[more]
sp\|B8AFI8\|OEP21_ORYSI	9.6e-22	33.33	Outer envelope pore protein 21, chloroplastic OS=Oryza sativa subsp. indica OX=3...	[more]
sp\|Q6K965\|OEP21_ORYSJ	9.6e-22	33.33	Outer envelope pore protein 21, chloroplastic OS=Oryza sativa subsp. japonica OX...	[more]

BLAST of Carg21890 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KGQ0\|A0A0A0KGQ0_CUCSA	8.3e-63	73.84	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G355410 PE=4 SV=1	[more]
tr\|A0A1S3CMW4\|A0A1S3CMW4_CUCME	2.7e-61	72.67	outer envelope pore protein 21, chloroplastic OS=Cucumis melo OX=3656 GN=LOC1035...	[more]
tr\|D7UDD6\|D7UDD6_VITVI	4.0e-49	56.98	Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_18s0122g00880 PE=4 SV=...	[more]
tr\|A0A1Q3BCT2\|A0A1Q3BCT2_CEPFO	4.4e-48	56.40	Uncharacterized protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_09360 PE=4...	[more]
tr\|A0A2R6PZ92\|A0A2R6PZ92_ACTCH	9.9e-48	54.65	Outer envelope pore protein like OS=Actinidia chinensis var. chinensis OX=159084...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0044070	regulation of anion transport

Vocabulary: **Molecular Function**
Term	Definition
GO:0008308	voltage-gated anion channel activity

Vocabulary: **INTERPRO**
Term	Definition
IPR034575	OEP21

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0044070	regulation of anion transport
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0008308	voltage-gated anion channel activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg21890-RA	Carg21890-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR034575	Outer envelope pore protein 21	PANTHER	PTHR35993	FAMILY NOT NAMED	coord: 1..126 coord: 131..171

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg21890	Cla021920	Watermelon (97103) v1	carwmB0199
Carg21890	Csa6G355410	Cucumber (Chinese Long) v2	carcuB0236
Carg21890	MELO3C026523	Melon (DHL92) v3.5.1	carmeB0216
Carg21890	ClCG08G009240	Watermelon (Charleston Gray)	carwcgB0205
Carg21890	CSPI06G18480	Wild cucumber (PI 183967)	carcpiB0242
Carg21890	Cucsa.077410	Cucumber (Gy14) v1	carcgyB0255
Carg21890	CmaCh12G006900	Cucurbita maxima (Rimu)	carcmaB0289
Carg21890	CmoCh12G006240	Cucurbita moschata (Rifu)	carcmoB0294
Carg21890	CmoCh05G009860	Cucurbita moschata (Rifu)	carcmoB0296
Carg21890	Lsi08G007740	Bottle gourd (USVL1VR-Ls)	carlsiB188
Carg21890	Cp4.1LG07g05860	Cucurbita pepo (Zucchini)	carcpeB0299
Carg21890	Cp4.1LG11g07820	Cucurbita pepo (Zucchini)	carcpeB0297
Carg21890	CsGy6G017980	Cucumber (Gy14) v2	carcgybB0225
Carg21890	MELO3C026523.2	Melon (DHL92) v3.6.1	carmedB0221
Carg21890	CsaV3_6G031380	Cucumber (Chinese Long) v3	carcucB0240
Carg21890	Cla97C08G152070	Watermelon (97103) v2	carwmbB0214
Carg21890	Bhi04G000963	Wax gourd	carwgoB0263

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg21890	Carg17637	Silver-seed gourd	carcarB159

The following block(s) are covering this gene:


Gene	Organism	Block
Carg21890	Wax gourd	carwgoB0262
Carg21890	Silver-seed gourd	carcarB247
Carg21890	Silver-seed gourd	carcarB248
Carg21890	Cucurbita maxima (Rimu)	carcmaB0290
Carg21890	Cucurbita moschata (Rifu)	carcmoB0295
Carg21890	Cucurbita pepo (Zucchini)	carcpeB0298