CmoCh12G005750 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh12G005750
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionMyb transcription factor family protein, putative
LocationCmo_Chr12 : 3551680 .. 3553398 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GAGAGAGAAAGAGAGAGAAAATGGTGAGGAAATGTTCCCATTGTGGCAATGTGGGTCACAATTCAAGAACTTGCATCATTCAAAAAGAAAAGATTAGAGGTAAATTTAAGCTGTTTGGAGTTCATCTTGATGGAGTTTCATCTTCTTCGGCGGCGGCGACGGTGGCGGGAGCGGCGGCGGCCGCCTTGTTGAAGAAGAGCATTAGCTTGGATTGTTTACCTTCTTCTTCTTCCTCCTCTTCTTGTGAGAAATTGTCAAATGGGTATCTCTCAGATGACCTCATTACCAAAACCCATGAAAGAAAAAAGGGTATGTTCCCATTTGTTGTTTGAAAGCTTAAGCTGATAGATTACGGTATATTTCGTTCGTTTCTTGTGTCGAAACCTTTTCGATCTTCTTCTTTGAAAAATGATTATGTGATTGTGTTTATGGTATTGTTAAGGTGTGCCATGGACTGAAGAAGAGCATAGAATGTTTCTTGTTGGGTTACAAAAGCTTGGAAAAGGAGATTGGAGAGGAATCTCGAGGAAATTTGTTACTACGAGAACTCCGACTCAAGTGGCTAGCCATGCACAAAAGTACTTTCTTCGACTCAATAGTCTCGACAAAAGAAAACACCGCCGCCCGAGCTTATTCGATGTAATTTCCCTTCAAACCTCTTCTTCATCTTTCAATCCAACTTTTTTTTTCATTCTTAGAAAAAGATTGAATTTTGAAGTATAACCCACTTTTTTAAGATAATGAATATTCATATTAAACAATATATATATATATATATATATATATATCAATAAGTCCCAACAATCCAATTGTTGCCATTAGAAAATTATGAAGAATGTTATTAAAATAACCCTCTTGTGTTTGTTTACTTGAATTTCCATTTTCATTGACTCATTAAATGCATAAACTGCTGAAAGAGATGATATTAGCAGTGCCTATCTATAATATATAATAATAAACTTATATGACATAATACTTTGAATTAAAAGTAATTTAGAGAAATAAAAAGGTCAAACTTTCTTCTTTAGATTTTTTTCTTCTCGTTGAAATTTCTACTATTCATTAAATATTATGTTGGGTAAGTTTATCGGTATTCCGAGACTAAATTGAAACTTTTTAAACACCGAAGACTACGTATAATTAACTTTTTCATCGTGATCTATGAATGGTAGGTAGCTACAAGGGACAAATTCAGAGTGCAAGTGGTGAAGGGCAACAATTCCAAGCCAAGCAACCTGCCTCCATCCATTTCCTTTGGGATTCCATCAAATTCAACTCCAATTCATAATCATGTTCATCAAAGTTTATTACCCATTTGGTTTGGTTATGAAGATCATAAGGCAGTCAAATTCGTTGAGAACCCCATCAAATGTTCGAGCTCAAGCAGCCATTTTCATGGGAAACAGAAGACAAAGAGCCATCATCAAGCTCCTGATTTGCAGCTGAGTTTGTCCACTCCAAAACCAGTAGAGCAAGCTGAGCAGCAGCAGCAGCAGCATTGCTGCAGAAATATACCCATTAATGGAGCCATTTCAGTGACGTGAGGACCACCGCAACTAAACTAAGATGCTGTCTTATTGAATATTGAAATTTTGTTTTTTTTTTTTTTGGTTATAAATAAGGATTGACTTGCTTTTTGGGTGTAGGATGACATATTAATTACTAGTAATTTGTAATTTTAAATGATGCCATATCTGTTTGACTAATGATCAATTTCAT

mRNA sequence

GAGAGAGAAAGAGAGAGAAAATGGTGAGGAAATGTTCCCATTGTGGCAATGTGGGTCACAATTCAAGAACTTGCATCATTCAAAAAGAAAAGATTAGAGGTAAATTTAAGCTGTTTGGAGTTCATCTTGATGGAGTTTCATCTTCTTCGGCGGCGGCGACGGTGGCGGGAGCGGCGGCGGCCGCCTTGTTGAAGAAGAGCATTAGCTTGGATTGTTTACCTTCTTCTTCTTCCTCCTCTTCTTGTGAGAAATTGTCAAATGGGTATCTCTCAGATGACCTCATTACCAAAACCCATGAAAGAAAAAAGGGTGTGCCATGGACTGAAGAAGAGCATAGAATGTTTCTTGTTGGGTTACAAAAGCTTGGAAAAGGAGATTGGAGAGGAATCTCGAGGAAATTTGTTACTACGAGAACTCCGACTCAAGTGGCTAGCCATGCACAAAAGTACTTTCTTCGACTCAATAGTCTCGACAAAAGAAAACACCGCCGCCCGAGCTTATTCGATGTAGCTACAAGGGACAAATTCAGAGTGCAAGTGGTGAAGGGCAACAATTCCAAGCCAAGCAACCTGCCTCCATCCATTTCCTTTGGGATTCCATCAAATTCAACTCCAATTCATAATCATGTTCATCAAAGTTTATTACCCATTTGGTTTGGTTATGAAGATCATAAGGCAGTCAAATTCGTTGAGAACCCCATCAAATGTTCGAGCTCAAGCAGCCATTTTCATGGGAAACAGAAGACAAAGAGCCATCATCAAGCTCCTGATTTGCAGCTGAGTTTGTCCACTCCAAAACCAGTAGAGCAAGCTGAGCAGCAGCAGCAGCAGCATTGCTGCAGAAATATACCCATTAATGGAGCCATTTCAGTGACGTGAGGACCACCGCAACTAAACTAAGATGCTGTCTTATTGAATATTGAAATTTTGTTTTTTTTTTTTTTGGTTATAAATAAGGATTGACTTGCTTTTTGGGTGTAGGATGACATATTAATTACTAGTAATTTGTAATTTTAAATGATGCCATATCTGTTTGACTAATGATCAATTTCAT

Coding sequence (CDS)

ATGGTGAGGAAATGTTCCCATTGTGGCAATGTGGGTCACAATTCAAGAACTTGCATCATTCAAAAAGAAAAGATTAGAGGTAAATTTAAGCTGTTTGGAGTTCATCTTGATGGAGTTTCATCTTCTTCGGCGGCGGCGACGGTGGCGGGAGCGGCGGCGGCCGCCTTGTTGAAGAAGAGCATTAGCTTGGATTGTTTACCTTCTTCTTCTTCCTCCTCTTCTTGTGAGAAATTGTCAAATGGGTATCTCTCAGATGACCTCATTACCAAAACCCATGAAAGAAAAAAGGGTGTGCCATGGACTGAAGAAGAGCATAGAATGTTTCTTGTTGGGTTACAAAAGCTTGGAAAAGGAGATTGGAGAGGAATCTCGAGGAAATTTGTTACTACGAGAACTCCGACTCAAGTGGCTAGCCATGCACAAAAGTACTTTCTTCGACTCAATAGTCTCGACAAAAGAAAACACCGCCGCCCGAGCTTATTCGATGTAGCTACAAGGGACAAATTCAGAGTGCAAGTGGTGAAGGGCAACAATTCCAAGCCAAGCAACCTGCCTCCATCCATTTCCTTTGGGATTCCATCAAATTCAACTCCAATTCATAATCATGTTCATCAAAGTTTATTACCCATTTGGTTTGGTTATGAAGATCATAAGGCAGTCAAATTCGTTGAGAACCCCATCAAATGTTCGAGCTCAAGCAGCCATTTTCATGGGAAACAGAAGACAAAGAGCCATCATCAAGCTCCTGATTTGCAGCTGAGTTTGTCCACTCCAAAACCAGTAGAGCAAGCTGAGCAGCAGCAGCAGCAGCATTGCTGCAGAAATATACCCATTAATGGAGCCATTTCAGTGACGTGA
Homology
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BLAST of CmoCh12G005750 vs. Swiss-Prot
Match: DIV_ANTMA (Transcription factor DIVARICATA OS=Antirrhinum majus GN=DIVARICATA PE=2 SV=1)

HSP 1 Score: 120.6 bits (301), Expect = 2.9e-26
Identity = 71/153 (46.41%), Postives = 87/153 (56.86%), Query Frame = 1 

Query: 93  ERKKGVPWTEEEHRMFLVGLQKLGKGDWRGISRKFVTTRTPTQVASHAQKYFLRLNSLDK 152
           ERKKGVPWTEEEH++FL+GL+K GKGDWR ISR FV TRTPTQVASHAQKYF+R  S  K
Sbjct: 127 ERKKGVPWTEEEHKLFLMGLKKYGKGDWRNISRNFVITRTPTQVASHAQKYFIRQLSGGK 186

Query: 153 RKHRRPSLFDVATRDKFRVQVVKGNNSKPSNLPPSISFGIPSNSTPIHNHVHQ-----SL 212
            K RR S+ D+ T +    Q    +N KP + P        ++ST IH    Q     + 
Sbjct: 187 DK-RRASIHDITTVNLSDNQTPSPDNKKPPSSPDHSMAQQQTSSTSIHKLPFQWDQTSNE 246

Query: 213 LPIWFGYEDHKAVKFVENPIKCSSSSSHFHGKQ 241
             + F    H    F  NP   +S      G+Q
Sbjct: 247 TIMGFASSGHHGNMFQSNPFGMNSYGFKMQGQQ 278

[Close]
BLAST of CmoCh12G005750 vs. Swiss-Prot
Match: MY1R1_SOLTU (Transcription factor MYB1R1 OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 115.2 bits (287), Expect = 1.2e-24
Identity = 96/282 (34.04%), Postives = 136/282 (48.23%), Query Frame = 1 

Query: 40  SSSSAAATVAGAAAAALL----------KKSISLDCLPS-------------SSSSSSCE 99
           SSS+ A T  G     +L          +KS+SL+ L                ++ SS  
Sbjct: 9   SSSTPAVTGGGFGGEIMLFGVRVKVDPMRKSVSLNDLSQYEHPNANNNNNGGDNNESSKV 68

Query: 100 KLSNGYLS-DDLI----TKTHERKKGVPWTEEEHRMFLVGLQKLGKGDWRGISRKFVTTR 159
               GY S DD +        ERK+GVPWTEEEH++FL+GLQK+GKGDWRGISR FV TR
Sbjct: 69  AQDEGYASADDAVQHQSNSGRERKRGVPWTEEEHKLFLLGLQKVGKGDWRGISRNFVKTR 128

Query: 160 TPTQVASHAQKYFLRLNSLDKRKHRRPSLFDVATRDKFRVQVVKGNNSK-------PSNL 219
           TPTQVASHAQKYFLR ++L++R+ RR SLFD+ T D   V  ++   +K       P+ L
Sbjct: 129 TPTQVASHAQKYFLRRSNLNRRR-RRSSLFDITT-DSVSVMPIEEVENKQEIPVVAPATL 188

Query: 220 PPSISFGIPSNSTPIHNHVHQSLLPIWFG---------YEDHKAVKFVENPIKCSSSSSH 277
           P +      +N+ P+   V   + P+              DH     +  P+   S  + 
Sbjct: 189 PTT-----KTNAFPVAPTVGPIIFPVQIDKSREYPTLLRHDHGNSSMLVGPVPMFSMPNP 248

[Close]
BLAST of CmoCh12G005750 vs. Swiss-Prot
Match: MYBJ_DICDI (Myb-like protein J OS=Dictyostelium discoideum GN=mybJ PE=3 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 1.7e-10
Identity = 39/85 (45.88%), Postives = 53/85 (62.35%), Query Frame = 1 

Query: 100 WTEEEHRMFLVGLQKLGKGDWRGISRKFVTTRTPTQVASHAQKYFLRLNSLDKRKHRRPS 159
           WT+EEH  FL G+Q  GKG W+ I++ FV TRTPTQ+ SHAQKY+LR     K K    S
Sbjct: 379 WTKEEHIRFLNGIQIHGKGAWKEIAQ-FVGTRTPTQIQSHAQKYYLRQKQETKNKR---S 438

Query: 160 LFDVATRDKFRVQVVKGNNSKPSNL 185
           + D++ +D     +   NNS  +N+
Sbjct: 439 IHDLSLQDLIDDNL---NNSNKNNV 456

[Close]
BLAST of CmoCh12G005750 vs. Swiss-Prot
Match: MYBI_DICDI (Myb-like protein I OS=Dictyostelium discoideum GN=mybI PE=3 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 6.0e-08
Identity = 30/65 (46.15%), Postives = 43/65 (66.15%), Query Frame = 1 

Query: 90  KTHERKKGVPWTEEEHRMFLVGLQKLGKGDWRGISRKFVTTRTPTQVASHAQKYFLRLNS 149
           ++ ++K+   WT EEH  F+  L K G  D + IS+ +V+TR PTQV +HAQKYFLR++ 
Sbjct: 165 QSEKKKQSRYWTPEEHSRFIEALSKYGHKDVKSISQ-YVSTRNPTQVRTHAQKYFLRIDR 224

Query: 150 LDKRK 155
              RK
Sbjct: 225 ERGRK 228

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BLAST of CmoCh12G005750 vs. Swiss-Prot
Match: RVE5_ARATH (Protein REVEILLE 5 OS=Arabidopsis thaliana GN=RVE5 PE=2 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 7.4e-06
Identity = 61/210 (29.05%), Postives = 97/210 (46.19%), Query Frame = 1 

Query: 66  LPSSSSSSSCE---KLSNGYLSDDLITKTHE----RKKGVPWTEEEHRMFLVGLQKLGKG 125
           LPSS    S     + S    S+D  TK  +    +K    WT++EH  FL  L    + 
Sbjct: 21  LPSSDGFGSIPATGRTSTVSFSEDPTTKIRKPYTIKKSRENWTDQEHDKFLEALHLFDR- 80

Query: 126 DWRGISRKFVTTRTPTQVASHAQKYFLRLNSLDKRKHRRPSLFDVATRDKFRVQVVKGNN 185
           DW+ I   FV ++T  Q+ SHAQKYFL++      +H  P       R K      K ++
Sbjct: 81  DWKKIEA-FVGSKTVVQIRSHAQKYFLKVQKSGANEHLPP------PRPK-----RKASH 140

Query: 186 SKPSNLPPSISF-GIPSNST-PIHNHVHQSLLPIWFGYEDHKAVKFVENPIKCSSSSSHF 245
             P   P ++++  +PS+ST P+       L P +    D K++  + N   C+S+SS +
Sbjct: 141 PYPIKAPKNVAYTSLPSSSTLPL-------LEPGYLYSSDSKSL--MGNQAVCASTSSSW 194

Query: 246 HGKQKTKSHHQAPDLQLSLSTPKPVEQAEQ 267
                   +H++ +L      PKPV + E+
Sbjct: 201 --------NHESTNL------PKPVIEVEE 194

[Close]
BLAST of CmoCh12G005750 vs. TrEMBL
Match: A0A0A0LKT1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G351740 PE=4 SV=1)

HSP 1 Score: 276.2 bits (705), Expect = 4.6e-71
Identity = 173/299 (57.86%), Postives = 197/299 (65.89%), Query Frame = 1 

Query: 1   MVRKCSHCGNVGHNSRTCIIQKEKIRGKFKLFGVHLDGVSSSSAAATVAGAAAAALLKKS 60
           MVRKCSHCGNVGHNSRTC IQK K   KFKLFGV L      +   T        LLKKS
Sbjct: 1   MVRKCSHCGNVGHNSRTCTIQKHK-ETKFKLFGVQL----IDNGTTTHHHHHHTTLLKKS 60

Query: 61  ISLDCLPSSSSS--------SSCEKLSNGYLSDDLITKTHERKKGVPWTEEEHRMFLVGL 120
           ISLD LPSSSSS        SS EKLSNGYLSD L+ KTHERKKGVPW+EEEH++FL+GL
Sbjct: 61  ISLDSLPSSSSSASSSLSSSSSSEKLSNGYLSDGLVAKTHERKKGVPWSEEEHKVFLIGL 120

Query: 121 QKLGKGDWRGISRKFVTTRTPTQVASHAQKYFLRLNSLDKRKHRRPSLFD-VATRDKFRV 180
           +KLGKGDWRGISRKFVTTRTPTQVASHAQKYFLRL +L+KRK RRPSLFD  A RDK  V
Sbjct: 121 EKLGKGDWRGISRKFVTTRTPTQVASHAQKYFLRLTTLNKRKQRRPSLFDGAAARDKLTV 180

Query: 181 QVVK---------GNNSKPS----NLPP----SISFGIPSNSTPIHNHVHQSLLPIWFGY 240
           QVV+          NN KP+    N+ P    +ISFG P+    I    + + +   +  
Sbjct: 181 QVVEKGSSSSSSINNNLKPTNNNYNIQPASSNNISFGNPTPIPNISELTNLNWIEYHYNQ 240

Query: 241 EDHKA-VKFVENPIKCSSSSSHFHGKQKTKS-----HHQAPDLQLSLSTPKPV-EQAEQ 267
             H+   KF+++PI  SSSS   +  Q T +     HH  PDLQLSLSTPKPV EQ  Q
Sbjct: 241 RHHEPYFKFLQSPINKSSSSITINNFQTTTNHHHHRHHHQPDLQLSLSTPKPVLEQVAQ 294

[Close]
BLAST of CmoCh12G005750 vs. TrEMBL
Match: A0A061GL43_THECC (Myb transcription factor family protein, putative OS=Theobroma cacao GN=TCM_037276 PE=4 SV=1)

HSP 1 Score: 226.1 bits (575), Expect = 5.4e-56
Identity = 144/298 (48.32%), Postives = 179/298 (60.07%), Query Frame = 1 

Query: 1   MVRKCSHCGNVGHNSRTCIIQKEKIRGKFKLFGVHLDGVSSSSAAATVAGAAAAALLKKS 60
           M RKCSHCGN GHNSRTC   +  +    KLFGV LD  SSS +           ++KK 
Sbjct: 1   MGRKCSHCGNKGHNSRTCSSNRGILPSGVKLFGVQLDLSSSSGSFP---------MIKKC 60

Query: 61  ISLDCLPSSSSSSSC--------EKLSNGYLSDD--LITKTHERKKGVPWTEEEHRMFLV 120
           +S+DCL S SSS+S         +KLS GYLSDD  L+ +T E+KKGVPWTEEEHR+FLV
Sbjct: 61  LSMDCLSSPSSSTSSHVTMDENPDKLSTGYLSDDGGLVARTQEKKKGVPWTEEEHRIFLV 120

Query: 121 GLQKLGKGDWRGISRKFVTTRTPTQVASHAQKYFLRLNSLDKRKHRRPSLFDVATRDKFR 180
           GL+KLGKGDWRGISR FVTTRTPTQVASHAQKYFLR NSL+KR+ RR SLFDV + +KF 
Sbjct: 121 GLEKLGKGDWRGISRNFVTTRTPTQVASHAQKYFLRKNSLNKRR-RRTSLFDVGS-EKFA 180

Query: 181 VQVVKGNNSKPSNLPPSI---SFGIPSNSTPIHNHVHQSLLPIWFGYEDHKAVKFVENPI 240
            Q        P NLP  +   +  +P N     N V  +   + F + +      ++   
Sbjct: 181 NQKFHSRPPDPFNLPEFLLKKTSVVPINLNAATNPVQGNSGDLEFAFSNDVPPLRIKESF 240

Query: 241 KCSSSSSHFHGKQKTKSHHQAPDLQLSLSTPKPVEQAEQQQQQHCCRNIPINGAISVT 286
              SSS          S  +APDL+LSL+ PKP++Q+E       C +  + G ISVT
Sbjct: 241 HIQSSS-----LTMATSKSEAPDLELSLAAPKPLDQSE------ACSHGLLFGPISVT 276

[Close]
BLAST of CmoCh12G005750 vs. TrEMBL
Match: A0A061GMU9_THECC (Myb-like transcription factor family protein, putative OS=Theobroma cacao GN=TCM_037687 PE=4 SV=1)

HSP 1 Score: 208.4 bits (529), Expect = 1.2e-50
Identity = 130/294 (44.22%), Postives = 169/294 (57.48%), Query Frame = 1 

Query: 1   MVRKCSHCGNVGHNSRTCIIQKEKIRGKFKLFGVHLDGVSSSSAAATVAGAAAAALLKKS 60
           M RKCSHCGN+GHNSRTC   +    G  +LFGV LD +SSSS A           +KKS
Sbjct: 1   MGRKCSHCGNIGHNSRTCTTYRRAAVGGLRLFGVQLD-ISSSSVA-----------MKKS 60

Query: 61  ISLDCL---------PSSSSSSS-------CEKLSNGYLSDDLITKTHERKKGVPWTEEE 120
            S+DCL         PSSS SSS        +K S GYLSD L+ ++ ERKKGVPWTEEE
Sbjct: 61  FSMDCLSSASPSSPSPSSSLSSSRVSIDENSDKTSIGYLSDGLMGRSPERKKGVPWTEEE 120

Query: 121 HRMFLVGLQKLGKGDWRGISRKFVTTRTPTQVASHAQKYFLRLNSLDKRKHRRPSLFDVA 180
           HR+FL+GL+KLGKGDWRGISR FVTTRTPTQVASHAQKYFLR  +L+K+K RR SLFD+ 
Sbjct: 121 HRIFLLGLEKLGKGDWRGISRNFVTTRTPTQVASHAQKYFLRQATLNKKK-RRSSLFDMV 180

Query: 181 TRDKFRVQVVKGNNSKPSNLPPSISFGIPSNSTPIHNHVHQSLLPIWFGYEDHKAVKFVE 240
                       +NS+P+++ P +             H H   + +  G+ D        
Sbjct: 181 RSSSMAGPHANSSNSRPAHIIPQLGL-----------HHHAMSVNLQHGFSD-------- 240

Query: 241 NPIKCSSSSSHFHGKQKTKSHHQAPDLQLSLSTPKPVEQAEQQQQQHCCRNIPI 279
                  S +      ++ S + APDL+L+L+ P+P+E+ +   +    R I +
Sbjct: 241 -------SQTATSNAAQSISRNVAPDLELTLAAPRPLEENKSSPRTLLIRPISV 255

[Close]
BLAST of CmoCh12G005750 vs. TrEMBL
Match: D7STN2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_04s0008g00900 PE=4 SV=1)

HSP 1 Score: 206.8 bits (525), Expect = 3.4e-50
Identity = 119/216 (55.09%), Postives = 138/216 (63.89%), Query Frame = 1 

Query: 1   MVRKCSHCGNVGHNSRTCI-------IQKEKIRGKFKLFGVHLDGVSSSSAAATVAGAAA 60
           M RKCSHCGN+GHNSRTC        +    + G  KLFGV L+  S++           
Sbjct: 1   MGRKCSHCGNIGHNSRTCTTLRGSSGVSSSSLTGGVKLFGVQLEMPSTTPLP-------- 60

Query: 61  AALLKKSISLDCLPSSSSSSSC------------EKLSNGYLSDDLITKTHERKKGVPWT 120
              +KKS SLDCLPSSSS+ S             +K S GYLSD LI +T ERKKGVPWT
Sbjct: 61  ---MKKSFSLDCLPSSSSTPSSSTSSRVSADENSDKFSRGYLSDGLIARTQERKKGVPWT 120

Query: 121 EEEHRMFLVGLQKLGKGDWRGISRKFVTTRTPTQVASHAQKYFLRLNSLDKRKHRRPSLF 180
           EEEHR FL+GL+KLG+GDWRGISR FVTTRTPTQVASHAQKYFLR +SL+K+K RRPSLF
Sbjct: 121 EEEHRTFLLGLEKLGRGDWRGISRNFVTTRTPTQVASHAQKYFLRQSSLNKKK-RRPSLF 180

Query: 181 DVATRDKFRVQVVKGNNSKPSNLPPSISFGIPSNST 198
           D+    KF   +V  N S P    PSI  G    +T
Sbjct: 181 DLVESSKFSFHLV--NPSIPQPNQPSIPCGFSLKTT 202

[Close]
BLAST of CmoCh12G005750 vs. TrEMBL
Match: B9RRT6_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0797750 PE=4 SV=1)

HSP 1 Score: 202.6 bits (514), Expect = 6.4e-49
Identity = 141/311 (45.34%), Postives = 172/311 (55.31%), Query Frame = 1 

Query: 1   MVRKCSHCGNVGHNSRTCIIQKEKIRGKFKLFGVHLDGVSSSSAAATVAGAAAAALLKKS 60
           M RKCSHCGNVGHNSRTC  +KE +R    LFGV L   SSSS+            LKKS
Sbjct: 1   MGRKCSHCGNVGHNSRTCHFEKESLR----LFGVKLHSNSSSSSHL---------FLKKS 60

Query: 61  ISLDCL--------------PSSSSSSSCE-----------KLSNGYLSDDLITKTHE-R 120
            S+DCL              PSSSSSSS             KLS GYLS+ L   T E R
Sbjct: 61  FSVDCLSSSSTTTTPPPPPPPSSSSSSSTTTTSTFGDNVDIKLSTGYLSEGLAAPTQEIR 120

Query: 121 KKGVPWTEEEHRMFLVGLQKLGKGDWRGISRKFVTTRTPTQVASHAQKYFLRLNSLDKRK 180
           KKGVPWT EEH++FL+GLQKLGKGDWRGISR FVTTRTPTQVASHAQKYFLR NS +KRK
Sbjct: 121 KKGVPWTAEEHQIFLLGLQKLGKGDWRGISRNFVTTRTPTQVASHAQKYFLRQNSFNKRK 180

Query: 181 HRRPSLFDVATRDKFRVQVVKGNNSKPSNLPPSISFGIPSNSTPIHNHVHQSLLPIWFGY 240
            RRPSLFD+ +      ++ + NN     L  + ++  P + +      H  +LP W   
Sbjct: 181 -RRPSLFDMESSQSSISKLNERNNFCGLALKNTEAYS-PGSYSKNLGLTHHLILPTW--- 240

Query: 241 EDHKAVKFVENPIKCSSSSSHFHGKQKTKSHHQAPDLQLSLSTPKPVEQAEQQQQQHCCR 286
                   +  P+  S  +S   G       H APDL+L L+ P  ++Q++       C 
Sbjct: 241 --------LNEPLISSRPTS--FGLTSRNVQHLAPDLELKLAAPASLDQSKS------CS 277

[Close]
BLAST of CmoCh12G005750 vs. TAIR10
Match: AT5G56840.1 (AT5G56840.1 myb-like transcription factor family protein)

HSP 1 Score: 188.0 bits (476), Expect = 8.3e-48
Identity = 116/218 (53.21%), Postives = 135/218 (61.93%), Query Frame = 1 

Query: 1   MVRKCSHCGNVGHNSRTCIIQKEKIRGKFKLFGVHLDGVSSSSAAATVAGAAAAALLKKS 60
           M R+CSHCGNVGHNSRTC   + ++    +LFGVHLD  SSS          AAA+ KKS
Sbjct: 1   MGRRCSHCGNVGHNSRTCSSYQTRV---VRLFGVHLDTTSSSPPPPPPPSILAAAI-KKS 60

Query: 61  ISLDCLPSSSSSSSCEKLSNGYLSDDLITKTHERKKGVPWTEEEHRMFLVGLQKLGKGDW 120
            S+DCLP+ SSSSS      GYLSD L  KT +RKKGVPWT EEHR FL+GL+KLGKGDW
Sbjct: 61  FSMDCLPACSSSSSSFA---GYLSDGLAHKTPDRKKGVPWTAEEHRTFLIGLEKLGKGDW 120

Query: 121 RGISRKFVTTRTPTQVASHAQKYFLRLNSLDKRKHRRPSLFDVATRDKFRVQVVKGNNSK 180
           RGISR FV T++PTQVASHAQKYFLR  +    K RR SLFD+         V  GN  +
Sbjct: 121 RGISRNFVVTKSPTQVASHAQKYFLRQTTTLHHKRRRTSLFDM---------VSAGNVEE 180

Query: 181 PSNLPPSISFGIPSNSTPIHNHVHQSLLPIWFGYEDHK 219
            S      +  I S+S  +     Q LL    GY D K
Sbjct: 181 NSTTKRICNDHIGSSSKVVWK---QGLLNPRLGYPDPK 199

[Close]
BLAST of CmoCh12G005750 vs. TAIR10
Match: AT5G61620.1 (AT5G61620.1 myb-like transcription factor family protein)

HSP 1 Score: 150.2 bits (378), Expect = 1.9e-36
Identity = 89/181 (49.17%), Postives = 112/181 (61.88%), Query Frame = 1 

Query: 1   MVRKCSHCGNVGHNSRTCIIQKEKIRGKFKLFGVHLDGVSSSSAAATVAGAAAAALLKKS 60
           + + CSHCG+ GHN+RTC+    K     KLFGV++          T         L+KS
Sbjct: 8   VAKTCSHCGHNGHNARTCLNGVNK--ASVKLFGVNISSDPIRPPEVTA--------LRKS 67

Query: 61  ISLD----CLPSSSSSSSCEKLS----NGYLSDDLITK-----THERKKGVPWTEEEHRM 120
           +SL      L +  S+ S + ++     GY SD  I        HE+KKG PWTEEEHR 
Sbjct: 68  LSLGNLDALLANDESNGSGDPIAAVDDTGYHSDGQIHSKKGKTAHEKKKGKPWTEEEHRN 127

Query: 121 FLVGLQKLGKGDWRGISRKFVTTRTPTQVASHAQKYFLRLNSLDKRKHRRPSLFDVATRD 169
           FL+GL KLGKGDWRGI++ FV+TRTPTQVASHAQKYF+RLN  DKRK RR SLFD++  D
Sbjct: 128 FLIGLNKLGKGDWRGIAKSFVSTRTPTQVASHAQKYFIRLNVNDKRK-RRASLFDISLED 177

[Close]
BLAST of CmoCh12G005750 vs. TAIR10
Match: AT3G16350.1 (AT3G16350.1 Homeodomain-like superfamily protein)

HSP 1 Score: 146.0 bits (367), Expect = 3.6e-35
Identity = 110/245 (44.90%), Postives = 131/245 (53.47%), Query Frame = 1 

Query: 1   MVRKCSHCGNVGHNSRTCIIQKEKIRG------------------KFKLFGVHL-DG--- 60
           M R+CSHC N GHNSRTC  +     G                    KLFGV L DG   
Sbjct: 1   MTRRCSHCSNNGHNSRTCPTRGGGTCGGSGGGGGGGGGGGSGSSSAVKLFGVRLTDGSII 60

Query: 61  ---VSSSSAAATVAGAAAAALLKKSISLDCLPSSSSSSSCE---KLSN-----GYLSDDL 120
               S  + +A    AAAA   + S S     S+ + S      + SN     GYLSDD 
Sbjct: 61  KKSASMGNLSALAVAAAAATHHRLSPSSPLATSNLNDSPLSDHARYSNLHHNEGYLSDDP 120

Query: 121 IT------KTHERKKGVPWTEEEHRMFLVGLQKLGKGDWRGISRKFVTTRTPTQVASHAQ 180
                   +  ERK+GVPWTEEEHR+FLVGLQKLGKGDWRGISR +VT+RTPTQVASHAQ
Sbjct: 121 AHGSGSSHRRGERKRGVPWTEEEHRLFLVGLQKLGKGDWRGISRNYVTSRTPTQVASHAQ 180

Query: 181 KYFLRLNSLDKRKHRRPSLFDVAT----RDKFRVQVVKG-NNSKPSNLPPSISFGIPSNS 202
           KYF+R  S  +RK RR SLFD+ T     D    Q  +  N S PS  P   S+ +PS  
Sbjct: 181 KYFIRHTSSSRRK-RRSSLFDMVTDEMVTDSSPTQEEQTLNGSSPSKEPEKKSY-LPSLE 240

[Close]
BLAST of CmoCh12G005750 vs. TAIR10
Match: AT5G47390.1 (AT5G47390.1 myb-like transcription factor family protein)

HSP 1 Score: 145.6 bits (366), Expect = 4.7e-35
Identity = 88/173 (50.87%), Postives = 108/173 (62.43%), Query Frame = 1 

Query: 1   MVRKCSHCGNVGHNSRTCIIQKEKIRGKFKLFGVHLDGVSSSSAAA-------TVAGAAA 60
           M R+CSHC + GHNSRTC       RG  KLFGV L   S   +A+       T +G+  
Sbjct: 1   MTRRCSHCNHNGHNSRTC-----PNRG-VKLFGVRLTEGSIRKSASMGNLSHYTGSGSGG 60

Query: 61  AALLKKSISLDCLPSSSSSSSCEKLSNGYLSDDLI---TKTHERKKGVPWTEEEHRMFLV 120
                 +      P S          +GY S+D +   + + ERKKG PWTEEEHRMFL+
Sbjct: 61  HGTGSNT------PGSPGDVPDHVAGDGYASEDFVAGSSSSRERKKGTPWTEEEHRMFLL 120

Query: 121 GLQKLGKGDWRGISRKFVTTRTPTQVASHAQKYFLRLNSLDKRKHRRPSLFDV 164
           GLQKLGKGDWRGISR +VTTRTPTQVASHAQKYF+R +++ +RK RR SLFD+
Sbjct: 121 GLQKLGKGDWRGISRNYVTTRTPTQVASHAQKYFIRQSNVSRRK-RRSSLFDM 160

[Close]
BLAST of CmoCh12G005750 vs. TAIR10
Match: AT1G70000.1 (AT1G70000.1 myb-like transcription factor family protein)

HSP 1 Score: 143.3 bits (360), Expect = 2.3e-34
Identity = 88/182 (48.35%), Postives = 108/182 (59.34%), Query Frame = 1 

Query: 1   MVRKCSHCGNVGHNSRTCIIQ-------KEKIRGK--FKLFGVHLDGVSSSSAAATVAGA 60
           M R CS CGN GHNSRTC           +K  G+    LFGV +   SSS         
Sbjct: 1   MSRSCSQCGNNGHNSRTCPTDITTTGDNNDKGGGEKAIMLFGVRVTEASSSC-------- 60

Query: 61  AAAALLKKSISLDCLPSSSSSSSCEKLSNG-YLSDDLIT---KTHERKKGVPWTEEEHRM 120
                 +KS+S++ L     +       +G Y SDD++    +  ERK+G PWTEEEHR+
Sbjct: 61  -----FRKSVSMNNLSQFDQTPDPNPTDDGGYASDDVVHASGRNRERKRGTPWTEEEHRL 120

Query: 121 FLVGLQKLGKGDWRGISRKFVTTRTPTQVASHAQKYFLRLNSLDKRKHRRPSLFDVATRD 170
           FL GL K+GKGDWRGISR FV TRTPTQVASHAQKYFLR  + ++R+ RR SLFD+ T D
Sbjct: 121 FLTGLHKVGKGDWRGISRNFVKTRTPTQVASHAQKYFLRRTNQNRRR-RRSSLFDI-TPD 167

[Close]
BLAST of CmoCh12G005750 vs. NCBI nr
Match: gi|659087473|ref|XP_008444471.1| (PREDICTED: myb-like protein I isoform X1 [Cucumis melo])

HSP 1 Score: 276.6 bits (706), Expect = 5.0e-71
Identity = 180/306 (58.82%), Postives = 200/306 (65.36%), Query Frame = 1 

Query: 1   MVRKCSHCGNVGHNSRTCIIQKEKIRGKFKLFGVHL---DGVSSSSAAATVAGAAAAALL 60
           MVRKCSHCGNVGHNSRTC IQK K   KFKLFGV L    G +               LL
Sbjct: 1   MVRKCSHCGNVGHNSRTCTIQKHK-ETKFKLFGVQLIDNGGTTHHHHHHHHHQHHHTTLL 60

Query: 61  KKSISLDCLPSSSSSS---------SCEKLSNGYLSDDLITKTHERKKGVPWTEEEHRMF 120
           KKSISLD LPSSSSSS         S EKLSNGYLSD L+ KTHERKKGVPW+EEEH++F
Sbjct: 61  KKSISLDSLPSSSSSSASSSLSCSSSSEKLSNGYLSDGLVAKTHERKKGVPWSEEEHKVF 120

Query: 121 LVGLQKLGKGDWRGISRKFVTTRTPTQVASHAQKYFLRLNSLDKRKHRRPSLFD--VATR 180
           LVGL+KLGKGDWRGISRKFVTTRTPTQVASHAQKYFLRL +L+KRK RRPSLFD   A R
Sbjct: 121 LVGLEKLGKGDWRGISRKFVTTRTPTQVASHAQKYFLRLTTLNKRKQRRPSLFDGSAAAR 180

Query: 181 DKFRVQVVK--------GNNSKP----SNLPP----SISFGIPSNSTPIHNHVHQSLLPI 240
           DK  VQVV+         NN KP    +N+ P    +ISFG   N TPI N    S L  
Sbjct: 181 DKLTVQVVEKGSSSSNTNNNLKPTNNNNNIQPASSNNISFG---NPTPIQNISELSNLN- 240

Query: 241 WFGYEDHKA-----VKFVENPIKCSSSSSHFHGKQKTKS----HHQAPDLQLSLSTPKPV 267
           WF Y  ++       KF+++PI  SS+S   +  Q T +    HH  PDLQLSLSTPKPV
Sbjct: 241 WFDYHYNQRHHEPYFKFLQSPINKSSNSIMINNFQTTTNHHHRHHHPPDLQLSLSTPKPV 300

[Close]
BLAST of CmoCh12G005750 vs. NCBI nr
Match: gi|449450578|ref|XP_004143039.1| (PREDICTED: transcription factor MYB1R1-like [Cucumis sativus])

HSP 1 Score: 276.2 bits (705), Expect = 6.6e-71
Identity = 173/299 (57.86%), Postives = 197/299 (65.89%), Query Frame = 1 

Query: 1   MVRKCSHCGNVGHNSRTCIIQKEKIRGKFKLFGVHLDGVSSSSAAATVAGAAAAALLKKS 60
           MVRKCSHCGNVGHNSRTC IQK K   KFKLFGV L      +   T        LLKKS
Sbjct: 1   MVRKCSHCGNVGHNSRTCTIQKHK-ETKFKLFGVQL----IDNGTTTHHHHHHTTLLKKS 60

Query: 61  ISLDCLPSSSSS--------SSCEKLSNGYLSDDLITKTHERKKGVPWTEEEHRMFLVGL 120
           ISLD LPSSSSS        SS EKLSNGYLSD L+ KTHERKKGVPW+EEEH++FL+GL
Sbjct: 61  ISLDSLPSSSSSASSSLSSSSSSEKLSNGYLSDGLVAKTHERKKGVPWSEEEHKVFLIGL 120

Query: 121 QKLGKGDWRGISRKFVTTRTPTQVASHAQKYFLRLNSLDKRKHRRPSLFD-VATRDKFRV 180
           +KLGKGDWRGISRKFVTTRTPTQVASHAQKYFLRL +L+KRK RRPSLFD  A RDK  V
Sbjct: 121 EKLGKGDWRGISRKFVTTRTPTQVASHAQKYFLRLTTLNKRKQRRPSLFDGAAARDKLTV 180

Query: 181 QVVK---------GNNSKPS----NLPP----SISFGIPSNSTPIHNHVHQSLLPIWFGY 240
           QVV+          NN KP+    N+ P    +ISFG P+    I    + + +   +  
Sbjct: 181 QVVEKGSSSSSSINNNLKPTNNNYNIQPASSNNISFGNPTPIPNISELTNLNWIEYHYNQ 240

Query: 241 EDHKA-VKFVENPIKCSSSSSHFHGKQKTKS-----HHQAPDLQLSLSTPKPV-EQAEQ 267
             H+   KF+++PI  SSSS   +  Q T +     HH  PDLQLSLSTPKPV EQ  Q
Sbjct: 241 RHHEPYFKFLQSPINKSSSSITINNFQTTTNHHHHRHHHQPDLQLSLSTPKPVLEQVAQ 294

[Close]
BLAST of CmoCh12G005750 vs. NCBI nr
Match: gi|659087475|ref|XP_008444472.1| (PREDICTED: transcription factor MYB1R1-like isoform X2 [Cucumis melo])

HSP 1 Score: 226.5 bits (576), Expect = 6.0e-56
Identity = 125/178 (70.22%), Postives = 135/178 (75.84%), Query Frame = 1 

Query: 1   MVRKCSHCGNVGHNSRTCIIQKEKIRGKFKLFGVHL---DGVSSSSAAATVAGAAAAALL 60
           MVRKCSHCGNVGHNSRTC IQK K   KFKLFGV L    G +               LL
Sbjct: 1   MVRKCSHCGNVGHNSRTCTIQKHK-ETKFKLFGVQLIDNGGTTHHHHHHHHHQHHHTTLL 60

Query: 61  KKSISLDCLPSSSSSS---------SCEKLSNGYLSDDLITKTHERKKGVPWTEEEHRMF 120
           KKSISLD LPSSSSSS         S EKLSNGYLSD L+ KTHERKKGVPW+EEEH++F
Sbjct: 61  KKSISLDSLPSSSSSSASSSLSCSSSSEKLSNGYLSDGLVAKTHERKKGVPWSEEEHKVF 120

Query: 121 LVGLQKLGKGDWRGISRKFVTTRTPTQVASHAQKYFLRLNSLDKRKHRRPSLFDVATR 167
           LVGL+KLGKGDWRGISRKFVTTRTPTQVASHAQKYFLRL +L+KRK RRPSLFD  ++
Sbjct: 121 LVGLEKLGKGDWRGISRKFVTTRTPTQVASHAQKYFLRLTTLNKRKQRRPSLFDCCSK 177

[Close]
BLAST of CmoCh12G005750 vs. NCBI nr
Match: gi|590573945|ref|XP_007012263.1| (Myb transcription factor family protein, putative [Theobroma cacao])

HSP 1 Score: 226.1 bits (575), Expect = 7.8e-56
Identity = 144/298 (48.32%), Postives = 179/298 (60.07%), Query Frame = 1 

Query: 1   MVRKCSHCGNVGHNSRTCIIQKEKIRGKFKLFGVHLDGVSSSSAAATVAGAAAAALLKKS 60
           M RKCSHCGN GHNSRTC   +  +    KLFGV LD  SSS +           ++KK 
Sbjct: 1   MGRKCSHCGNKGHNSRTCSSNRGILPSGVKLFGVQLDLSSSSGSFP---------MIKKC 60

Query: 61  ISLDCLPSSSSSSSC--------EKLSNGYLSDD--LITKTHERKKGVPWTEEEHRMFLV 120
           +S+DCL S SSS+S         +KLS GYLSDD  L+ +T E+KKGVPWTEEEHR+FLV
Sbjct: 61  LSMDCLSSPSSSTSSHVTMDENPDKLSTGYLSDDGGLVARTQEKKKGVPWTEEEHRIFLV 120

Query: 121 GLQKLGKGDWRGISRKFVTTRTPTQVASHAQKYFLRLNSLDKRKHRRPSLFDVATRDKFR 180
           GL+KLGKGDWRGISR FVTTRTPTQVASHAQKYFLR NSL+KR+ RR SLFDV + +KF 
Sbjct: 121 GLEKLGKGDWRGISRNFVTTRTPTQVASHAQKYFLRKNSLNKRR-RRTSLFDVGS-EKFA 180

Query: 181 VQVVKGNNSKPSNLPPSI---SFGIPSNSTPIHNHVHQSLLPIWFGYEDHKAVKFVENPI 240
            Q        P NLP  +   +  +P N     N V  +   + F + +      ++   
Sbjct: 181 NQKFHSRPPDPFNLPEFLLKKTSVVPINLNAATNPVQGNSGDLEFAFSNDVPPLRIKESF 240

Query: 241 KCSSSSSHFHGKQKTKSHHQAPDLQLSLSTPKPVEQAEQQQQQHCCRNIPINGAISVT 286
              SSS          S  +APDL+LSL+ PKP++Q+E       C +  + G ISVT
Sbjct: 241 HIQSSS-----LTMATSKSEAPDLELSLAAPKPLDQSE------ACSHGLLFGPISVT 276

[Close]
BLAST of CmoCh12G005750 vs. NCBI nr
Match: gi|659087477|ref|XP_008444473.1| (PREDICTED: transcription factor MYB1R1-like isoform X3 [Cucumis melo])

HSP 1 Score: 226.1 bits (575), Expect = 7.8e-56
Identity = 125/175 (71.43%), Postives = 134/175 (76.57%), Query Frame = 1 

Query: 1   MVRKCSHCGNVGHNSRTCIIQKEKIRGKFKLFGVHL---DGVSSSSAAATVAGAAAAALL 60
           MVRKCSHCGNVGHNSRTC IQK K   KFKLFGV L    G +               LL
Sbjct: 1   MVRKCSHCGNVGHNSRTCTIQKHK-ETKFKLFGVQLIDNGGTTHHHHHHHHHQHHHTTLL 60

Query: 61  KKSISLDCLPSSSSSS---------SCEKLSNGYLSDDLITKTHERKKGVPWTEEEHRMF 120
           KKSISLD LPSSSSSS         S EKLSNGYLSD L+ KTHERKKGVPW+EEEH++F
Sbjct: 61  KKSISLDSLPSSSSSSASSSLSCSSSSEKLSNGYLSDGLVAKTHERKKGVPWSEEEHKVF 120

Query: 121 LVGLQKLGKGDWRGISRKFVTTRTPTQVASHAQKYFLRLNSLDKRKHRRPSLFDV 164
           LVGL+KLGKGDWRGISRKFVTTRTPTQVASHAQKYFLRL +L+KRK RRPSLFD+
Sbjct: 121 LVGLEKLGKGDWRGISRKFVTTRTPTQVASHAQKYFLRLTTLNKRKQRRPSLFDL 174

The following BLAST results are available for this feature:
BLAST of CmoCh12G005750 vs. Swiss-Prot
Match NameE-valueIdentityDescription
DIV_ANTMA2.9e-2646.41Transcription factor DIVARICATA OS=Antirrhinum majus GN=DIVARICATA PE=2 SV=1[more]
MY1R1_SOLTU1.2e-2434.04Transcription factor MYB1R1 OS=Solanum tuberosum PE=2 SV=1[more]
MYBJ_DICDI1.7e-1045.88Myb-like protein J OS=Dictyostelium discoideum GN=mybJ PE=3 SV=1[more]
MYBI_DICDI6.0e-0846.15Myb-like protein I OS=Dictyostelium discoideum GN=mybI PE=3 SV=1[more]
RVE5_ARATH7.4e-0629.05Protein REVEILLE 5 OS=Arabidopsis thaliana GN=RVE5 PE=2 SV=1[more]
BLAST of CmoCh12G005750 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LKT1_CUCSA4.6e-7157.86Uncharacterized protein OS=Cucumis sativus GN=Csa_2G351740 PE=4 SV=1[more]
A0A061GL43_THECC5.4e-5648.32Myb transcription factor family protein, putative OS=Theobroma cacao GN=TCM_0372... [more]
A0A061GMU9_THECC1.2e-5044.22Myb-like transcription factor family protein, putative OS=Theobroma cacao GN=TCM... [more]
D7STN2_VITVI3.4e-5055.09Putative uncharacterized protein OS=Vitis vinifera GN=VIT_04s0008g00900 PE=4 SV=... [more]
B9RRT6_RICCO6.4e-4945.34Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0797750 PE=4 SV=1[more]
BLAST of CmoCh12G005750 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G56840.18.3e-4853.21 myb-like transcription factor family protein[more]
AT5G61620.11.9e-3649.17 myb-like transcription factor family protein[more]
AT3G16350.13.6e-3544.90 Homeodomain-like superfamily protein[more]
AT5G47390.14.7e-3550.87 myb-like transcription factor family protein[more]
AT1G70000.12.3e-3448.35 myb-like transcription factor family protein[more]
BLAST of CmoCh12G005750 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659087473|ref|XP_008444471.1|5.0e-7158.82PREDICTED: myb-like protein I isoform X1 [Cucumis melo][more]
gi|449450578|ref|XP_004143039.1|6.6e-7157.86PREDICTED: transcription factor MYB1R1-like [Cucumis sativus][more]
gi|659087475|ref|XP_008444472.1|6.0e-5670.22PREDICTED: transcription factor MYB1R1-like isoform X2 [Cucumis melo][more]
gi|590573945|ref|XP_007012263.1|7.8e-5648.32Myb transcription factor family protein, putative [Theobroma cacao][more]
gi|659087477|ref|XP_008444473.1|7.8e-5671.43PREDICTED: transcription factor MYB1R1-like isoform X3 [Cucumis melo][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001005SANT/Myb
IPR001878Znf_CCHC
IPR006447Myb_dom_plants
IPR009057Homeobox-like_sf
IPR017930Myb_dom
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO:0008270zinc ion binding
GO:0003677DNA binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0016310 phosphorylation
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005575 cellular_component
cellular_component GO:0016020 membrane
cellular_component GO:0005634 nucleus
molecular_function GO:0003677 DNA binding
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0016301 kinase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh12G005750.1CmoCh12G005750.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001005SANT/Myb domainPFAMPF00249Myb_DNA-bindingcoord: 99..143
score: 1.5
IPR001005SANT/Myb domainSMARTSM00717santcoord: 96..146
score: 6.4
IPR001878Zinc finger, CCHC-typePROFILEPS50158ZF_CCHCcoord: 3..18
score: 8
IPR006447Myb domain, plantsTIGRFAMsTIGR01557TIGR01557coord: 95..146
score: 2.3
IPR009057Homeodomain-likeGENE3DG3DSA:1.10.10.60coord: 96..142
score: 1.4
IPR009057Homeodomain-likeunknownSSF46689Homeodomain-likecoord: 93..149
score: 5.53
IPR017930Myb domainPROFILEPS51294HTH_MYBcoord: 92..148
score: 17
NoneNo IPR availablePANTHERPTHR12374TRANSCRIPTIONAL ADAPTOR 2 ADA2 -RELATEDcoord: 3..172
score: 1.5
NoneNo IPR availablePANTHERPTHR12374:SF19SUBFAMILY NOT NAMEDcoord: 3..172
score: 1.5

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmoCh12G005750Cucsa.395160Cucumber (Gy14) v1cgycmoB1086
CmoCh12G005750CmaCh12G006350Cucurbita maxima (Rimu)cmacmoB176
CmoCh12G005750Csa2G351740Cucumber (Chinese Long) v2cmocuB158
CmoCh12G005750MELO3C010758Melon (DHL92) v3.5.1cmomeB146
CmoCh12G005750ClCG08G016980Watermelon (Charleston Gray)cmowcgB161
CmoCh12G005750CSPI02G18030Wild cucumber (PI 183967)cmocpiB160
CmoCh12G005750Lsi08G015780Bottle gourd (USVL1VR-Ls)cmolsiB175
CmoCh12G005750Lsi06G002660Bottle gourd (USVL1VR-Ls)cmolsiB171
CmoCh12G005750Cp4.1LG04g10590Cucurbita pepo (Zucchini)cmocpeB171
CmoCh12G005750Cp4.1LG18g03730Cucurbita pepo (Zucchini)cmocpeB161
CmoCh12G005750Cp4.1LG07g06310Cucurbita pepo (Zucchini)cmocpeB174
CmoCh12G005750MELO3C010758.2Melon (DHL92) v3.6.1cmomedB161
CmoCh12G005750CsaV3_2G025610Cucumber (Chinese Long) v3cmocucB0186
CmoCh12G005750Cla97C08G160670Watermelon (97103) v2cmowmbB178
CmoCh12G005750Bhi04G000451Wax gourdcmowgoB0190
CmoCh12G005750CsGy1G027240Cucumber (Gy14) v2cgybcmoB053
CmoCh12G005750CsGy2G017960Cucumber (Gy14) v2cgybcmoB171
CmoCh12G005750Carg23964Silver-seed gourdcarcmoB0948
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CmoCh12G005750CmoCh11G006930Cucurbita moschata (Rifu)cmocmoB083
The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh12G005750Cucurbita moschata (Rifu)cmocmoB004
CmoCh12G005750Cucurbita moschata (Rifu)cmocmoB156
CmoCh12G005750Cucurbita maxima (Rimu)cmacmoB770
CmoCh12G005750Watermelon (97103) v1cmowmB134
CmoCh12G005750Cucurbita pepo (Zucchini)cmocpeB154
CmoCh12G005750Cucurbita pepo (Zucchini)cmocpeB172
CmoCh12G005750Bottle gourd (USVL1VR-Ls)cmolsiB166
CmoCh12G005750Silver-seed gourdcarcmoB0257
CmoCh12G005750Silver-seed gourdcarcmoB0440