Cp4.1LG07g06310 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: CDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTGAGGAAATGTTCCCATTGTGGCAATGTGGGTCACAATTCAAGAACTTGCATCATTCAAAAAGAAAAGATTAGAGGTAAATTTAAGCTGTTTGGAGTTCATCTTGATGGAGTTTCATCTTCTTCGGTGGCGACGGTGGCGGGGGCGGCGGCGGCCGCCTTGTTGAAGAAGAGCATTAGCATGGAATGTTTGCCATCTTCTTCTTCTTCCTCTTCTTCTTGTGAGAAATTGTCAAATGGGTATCTCTCAGATGGGCTCATTACCAAAACCCATGAAAGAAAAAAGGGTATGTTCCCATTTGTTGTTTGAAAAGCTTAAAGCTGATAGATTACGGTATATTTCGTTCGTTCTTGTGTCGAAACCTTTTCGATCTTTTTCTATGGAAAATGATTATGTGATTGTGTTTGTGGTATTGTTAAGGTGTGCCATGGACGGAAGAAGAGCATAGAATGTTTCTTGTTGGGTTACAAAAGCTTGGAAAAGGAGATTGGAGAGGAATCTCGAGGAAATTTGTTACTACGAGAACTCCGACTCAAGTGGCTAGCCATGCACAAAAGTACTTTCTTCGACTCAATAGTCTCGACAAAAGAAAACACCGCCGCCCGAGCTTATTCGATGTAATTTCCCTTCAAAACTCTTCTTCATCTTTCAATCCAACTTTTTTTTTTTTTCATTCTTAGAAAAAGATTGAATTTTGAAGAATAACCCACTTTTTTAAGATAATGAATATTCATATATATATATATATATATATATATATATATCAATAAGTCCCAACAATCCAATTGTTGCCATTAGAAAATTATGAAGAATGTTATTAAAATAACCCTCTTGTGTTTGTTTACTTGAATTTCCATTTTCATTGACTCATTAAATGCATAAACTGCTGAAAGAGATGATATTATTAGTGCCTATCTATAATATATAATAATAAACTTATATGACATAATACTTTGAATTAAAAGTAATTTAGAGAAATAAAAAGGTCAAACTTTCTTCTTTAGATTTTTTTTTTTCTTGTTAATTTATTAAATATTAAATATTATGTTGGGTAAGTTTATCAGTATTTCGAGACTAAATTGAAATTTTTTAAACACCAAAGACCACGTATAATTAAACTTTTTCGTCGTGATCTATGAATGGCAGGTAGCTACAAGGGACAAATTCAGAGTCCAAGTGGTGAAGGGGAACAATTCCAAGCCAAGCAACCTGCCTCCATCCATTTCCTTTGGGATTCCATCAAATTCAACTCCAATTCATAATCATGTTCATCAAAGTTTATTGCCCATTTGGTTTGGTTATGAAGATCACAAGGCATTCAAATTCCTTGAGAACCCCATCAAATGTTCGAGCTCAAGCAGCCATTTTCATGGGAAACAGAAGACAAAGAGCCATCATCAAGCTCCTGATTTGCAGCTGAGTTTGTCCACTCCAAAGCCAGTAGAGCAAGCTGAGCAGCAGCAGCATTGCTGCAGAAATATACCCATTAATGGAGCCATTTCAGTGACGTGAGGACCAGCGCAACTAAACTAAGAAGCTGTCTTATTGAATATTGAAATTTTGTTTTTTGTTGTTNTAAGGATCGACTTGCTTTGCTTTTTGGGTGTAGGATGAAATATTAATTACTAGTAATTTGTAATTTTAAATGATACTAATGATCAATTTCAGTTGTAGCAAGCCTCTTCCTCACT ATGGTGAGGAAATGTTCCCATTGTGGCAATGTGGGTCACAATTCAAGAACTTGCATCATTCAAAAAGAAAAGATTAGAGGTGTGCCATGGACGGAAGAAGAGCATAGAATGTTTCTTGTTGGGTTACAAAAGCTTGGAAAAGGAGATTGGAGAGGAATCTCGAGGAAATTTGTTACTACGAGAACTCCGACTCAAGTGGCTAGCCATGCACAAAAGTACTTTCTTCGACTCAATAGTCTCGACAAAAGAAAACACCGCCGCCCGAGCTTATTCGATGTAGCTACAAGGGACAAATTCAGAGTCCAAGTGGTGAAGGGGAACAATTCCAAGCCAAGCAACCTGCCTCCATCCATTTCCTTTGGGATTCCATCAAATTCAACTCCAATTCATAATCATGTTCATCAAAGTTTATTGCCCATTTGGTTTGGTTATGAAGATCACAAGGCATTCAAATTCCTTGAGAACCCCATCAAATGTTCGAGCTCAAGCAGCCATTTTCATGGGAAACAGAAGACAAAGAGCCATCATCAAGCTCCTGATTTGCAGCTGAGTTTGTCCACTCCAAAGCCAGTAGAGCAAGCTGAGCAGCAGCAGCATTGCTGCAGAAATATACCCATTAATGGAGCCATTTCAGTGACGTGAGGACCAGCGCAACTAAACTAAGAAGCTGTCTTATTGAATATTGAAATTTTGTTTTTTGTTGTTNTAAGGATCGACTTGCTTTGCTTTTTGGGTGTAGGATGAAATATTAATTACTAGTAATTTGTAATTTTAAATGATACTAATGATCAATTTCAGTTGTAGCAAGCCTCTTCCTCACT ATGGTGAGGAAATGTTCCCATTGTGGCAATGTGGGTCACAATTCAAGAACTTGCATCATTCAAAAAGAAAAGATTAGAGGTGTGCCATGGACGGAAGAAGAGCATAGAATGTTTCTTGTTGGGTTACAAAAGCTTGGAAAAGGAGATTGGAGAGGAATCTCGAGGAAATTTGTTACTACGAGAACTCCGACTCAAGTGGCTAGCCATGCACAAAAGTACTTTCTTCGACTCAATAGTCTCGACAAAAGAAAACACCGCCGCCCGAGCTTATTCGATGTAGCTACAAGGGACAAATTCAGAGTCCAAGTGGTGAAGGGGAACAATTCCAAGCCAAGCAACCTGCCTCCATCCATTTCCTTTGGGATTCCATCAAATTCAACTCCAATTCATAATCATGTTCATCAAAGTTTATTGCCCATTTGGTTTGGTTATGAAGATCACAAGGCATTCAAATTCCTTGAGAACCCCATCAAATGTTCGAGCTCAAGCAGCCATTTTCATGGGAAACAGAAGACAAAGAGCCATCATCAAGCTCCTGATTTGCAGCTGAGTTTGTCCACTCCAAAGCCAGTAGAGCAAGCTGAGCAGCAGCAGCATTGCTGCAGAAATATACCCATTAATGGAGCCATTTCAGTGACGTGA MVRKCSHCGNVGHNSRTCIIQKEKIRGVPWTEEEHRMFLVGLQKLGKGDWRGISRKFVTTRTPTQVASHAQKYFLRLNSLDKRKHRRPSLFDVATRDKFRVQVVKGNNSKPSNLPPSISFGIPSNSTPIHNHVHQSLLPIWFGYEDHKAFKFLENPIKCSSSSSHFHGKQKTKSHHQAPDLQLSLSTPKPVEQAEQQQHCCRNIPINGAISVT
BLAST of Cp4.1LG07g06310 vs. Swiss-Prot
Match: MY1R1_SOLTU (Transcription factor MYB1R1 OS=Solanum tuberosum PE=2 SV=1) HSP 1 Score: 120.9 bits (302), Expect = 1.6e-26 Identity = 79/202 (39.11%), Postives = 108/202 (53.47%), Query Frame = 1
BLAST of Cp4.1LG07g06310 vs. Swiss-Prot
Match: DIV_ANTMA (Transcription factor DIVARICATA OS=Antirrhinum majus GN=DIVARICATA PE=2 SV=1) HSP 1 Score: 116.3 bits (290), Expect = 4.1e-25 Identity = 68/155 (43.87%), Postives = 88/155 (56.77%), Query Frame = 1
BLAST of Cp4.1LG07g06310 vs. Swiss-Prot
Match: MYBJ_DICDI (Myb-like protein J OS=Dictyostelium discoideum GN=mybJ PE=3 SV=1) HSP 1 Score: 68.2 bits (165), Expect = 1.3e-10 Identity = 39/85 (45.88%), Postives = 53/85 (62.35%), Query Frame = 1
BLAST of Cp4.1LG07g06310 vs. Swiss-Prot
Match: MYBI_DICDI (Myb-like protein I OS=Dictyostelium discoideum GN=mybI PE=3 SV=1) HSP 1 Score: 58.2 bits (139), Expect = 1.3e-07 Identity = 29/55 (52.73%), Postives = 37/55 (67.27%), Query Frame = 1
BLAST of Cp4.1LG07g06310 vs. TrEMBL
Match: A0A0A0LKT1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G351740 PE=4 SV=1) HSP 1 Score: 181.4 bits (459), Expect = 1.1e-42 Identity = 109/199 (54.77%), Postives = 132/199 (66.33%), Query Frame = 1
BLAST of Cp4.1LG07g06310 vs. TrEMBL
Match: A0A061GL43_THECC (Myb transcription factor family protein, putative OS=Theobroma cacao GN=TCM_037276 PE=4 SV=1) HSP 1 Score: 153.7 bits (387), Expect = 2.6e-34 Identity = 95/195 (48.72%), Postives = 120/195 (61.54%), Query Frame = 1
BLAST of Cp4.1LG07g06310 vs. TrEMBL
Match: A0A068UJ77_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00027018001 PE=4 SV=1) HSP 1 Score: 144.1 bits (362), Expect = 2.0e-31 Identity = 86/181 (47.51%), Postives = 113/181 (62.43%), Query Frame = 1
BLAST of Cp4.1LG07g06310 vs. TrEMBL
Match: B9RRT6_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0797750 PE=4 SV=1) HSP 1 Score: 137.1 bits (344), Expect = 2.5e-29 Identity = 85/193 (44.04%), Postives = 113/193 (58.55%), Query Frame = 1
BLAST of Cp4.1LG07g06310 vs. TrEMBL
Match: V4UIJ0_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10009011mg PE=4 SV=1) HSP 1 Score: 136.0 bits (341), Expect = 5.5e-29 Identity = 91/200 (45.50%), Postives = 124/200 (62.00%), Query Frame = 1
BLAST of Cp4.1LG07g06310 vs. TAIR10
Match: AT3G16350.1 (AT3G16350.1 Homeodomain-like superfamily protein) HSP 1 Score: 122.5 bits (306), Expect = 3.2e-28 Identity = 70/124 (56.45%), Postives = 84/124 (67.74%), Query Frame = 1
BLAST of Cp4.1LG07g06310 vs. TAIR10
Match: AT5G61620.1 (AT5G61620.1 myb-like transcription factor family protein) HSP 1 Score: 119.4 bits (298), Expect = 2.7e-27 Identity = 56/76 (73.68%), Postives = 65/76 (85.53%), Query Frame = 1
BLAST of Cp4.1LG07g06310 vs. TAIR10
Match: AT5G47390.1 (AT5G47390.1 myb-like transcription factor family protein) HSP 1 Score: 117.9 bits (294), Expect = 7.9e-27 Identity = 54/72 (75.00%), Postives = 65/72 (90.28%), Query Frame = 1
BLAST of Cp4.1LG07g06310 vs. TAIR10
Match: AT1G74840.1 (AT1G74840.1 Homeodomain-like superfamily protein) HSP 1 Score: 114.4 bits (285), Expect = 8.7e-26 Identity = 57/102 (55.88%), Postives = 78/102 (76.47%), Query Frame = 1
BLAST of Cp4.1LG07g06310 vs. TAIR10
Match: AT1G70000.1 (AT1G70000.1 myb-like transcription factor family protein) HSP 1 Score: 113.6 bits (283), Expect = 1.5e-25 Identity = 55/78 (70.51%), Postives = 64/78 (82.05%), Query Frame = 1
BLAST of Cp4.1LG07g06310 vs. NCBI nr
Match: gi|659087473|ref|XP_008444471.1| (PREDICTED: myb-like protein I isoform X1 [Cucumis melo]) HSP 1 Score: 185.3 bits (469), Expect = 1.1e-43 Identity = 116/202 (57.43%), Postives = 135/202 (66.83%), Query Frame = 1
BLAST of Cp4.1LG07g06310 vs. NCBI nr
Match: gi|449450578|ref|XP_004143039.1| (PREDICTED: transcription factor MYB1R1-like [Cucumis sativus]) HSP 1 Score: 181.4 bits (459), Expect = 1.6e-42 Identity = 109/199 (54.77%), Postives = 132/199 (66.33%), Query Frame = 1
BLAST of Cp4.1LG07g06310 vs. NCBI nr
Match: gi|590573945|ref|XP_007012263.1| (Myb transcription factor family protein, putative [Theobroma cacao]) HSP 1 Score: 153.7 bits (387), Expect = 3.7e-34 Identity = 95/195 (48.72%), Postives = 120/195 (61.54%), Query Frame = 1
BLAST of Cp4.1LG07g06310 vs. NCBI nr
Match: gi|661888132|emb|CDP08249.1| (unnamed protein product [Coffea canephora]) HSP 1 Score: 144.1 bits (362), Expect = 2.9e-31 Identity = 86/181 (47.51%), Postives = 113/181 (62.43%), Query Frame = 1
BLAST of Cp4.1LG07g06310 vs. NCBI nr
Match: gi|698456859|ref|XP_009780710.1| (PREDICTED: myb-like protein J isoform X2 [Nicotiana sylvestris]) HSP 1 Score: 142.1 bits (357), Expect = 1.1e-30 Identity = 77/135 (57.04%), Postives = 83/135 (61.48%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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