CmoCh12G003340 (gene) Cucurbita moschata (Rifu)

NameCmoCh12G003340
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionPentatricopeptide repeat-containing protein, putative
LocationCmo_Chr12 : 2094430 .. 2096562 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGTCTTCATCTTCTTCCTCAGCATCGCGCCCTCTTCAATTCGCTCTTACGGTACACAAGTCACAAAGATTTTCAGAAGGGCAAGGCCATCCACGCTCATCTTCTCAGAACTGGTTCAATCTCCTCAGTTTACCTTTCTAACAGCCTTGTTAACTTGTATGCTAAATGCGGAAGCCTTGTGAAGGCCAAGCTTGTCTTCGACAGTATAACCAACAAAGACGTGGTTTCATGGAATTCTTTAATCAATGCCTACTCTCAACAGGGTCCCGTTGGATCTTCGTTTGTAATGGAGCTTTTTCAGAGAATGAGGGCGGAGAACACGCTGCCGAATGCCCATACTTTTGCTGGGGTTTTCACGGCTGCTTCAAGTTTATTCGAAACTTTAGGTGGCTTACAGGCCCATGCGCTTTCTATCAAGACTTCTAGCTTTTATGATGTTTTTGTTGGCAGTTCGCTTCTCAATATGTATTGCAAAATTGGGTGTTTACTGGATGCTCGTAAGGTGTTCGACAGAATGCCAGAGAGAAATTCTGTTTCGTGGGCTACTATGATTTCGGGGTATGCAATGCAAAGGAAGGCGTTTGAGGCTTGGGAATTGTTTTTATTAATGTGCCGTGGAGAGGGAATTCATAATGAGTTTATCTATACCAGTGTGCTTAGTGGACTGACGGTTCCTGAACTTGTTGACTCTGGTAAGCAAATTCATTGTCTTGCCCTTAAAAATGGATTGTTATCGATTGTTTCTGTAGGGAACGCTCTTGTTACAATGTATGCTAAATGTGGGTGCTTAGATGATGCACTTAAAACATTTGAATTGTCTGGTGATAAGAACTCTATTACATGGTCAGCTATGATAACTGGATATGCACAAGCTGGGAACTCGCATGAGGCCTTGAAGTTGTTTTCTTATATGCATTTTAATGGGAATAAGCCTAGTGAGTTTACTTTTGTTGGGGTGATCAATGCTTGTAGTGACTTGGGTGCTCTGGAAGAAGGGAAACAAATGCATGGTTATTCCTTGAAGATGGGATATGAATCCCAAATCTATATAATCACAGCTTTAGTTGATATGTATGCTAAATCTGGAAGCCTAGTTGATGCGCGAAAGGGGTTCGATTACTTAAAAGAACCCGATATTGTTTTGTGGACGTCCATGATTGGAGGATATGTTCAAAATGGTGAAAATGAAACTGCTTTGACTCTGTATTGTAGAATGCAAATGGAAGGGATTATGCCAAATGAGTTAACCATGGCTAGTGTCTTGAGAGCATGTTCAAGCCTTGCTGCTTTAGAACAAGGTAAGCAAATCCATGCCCGTACAATTAAGTATGGATTCAATCTAGAAGTTCCAGTTGGGAGTGCACTTTCAACCATGTATGCAAAGTGTGGTAGTTTAGAAGATGGGAACCTGGTGTTTAGGCGGATGCCTACTAGAGATATTGTGTCATGGAATGCAATGATATCCGGTCTTTCTCAAAACGGAGAGGGTCTTAAGGCCCTTGAACTCTTCGAAGAGATGCGACAAGGCCTGACAAAACCCGACTACGTTACTTTCGTGAACATTCTTTCTGCGTGCAGCCACATGGGATTGGTGGAAAGAGGTAAGGTCTATTTCAAGATGATGCTTGATGAGTTCGGCATTGTTCCAAGAGTCGAGCATTATGCTTGCATGGTAGACATTCTAAGCCGTGCAGGTAAGCTACTGGAAGCGAAAGAGTTCATAGAATCTGCGACGATTGATCACGGTATGTATCTATGGCGTATCTTGCTAGGAGCGTGTCGAAACTATCGAAATTATGAATTAGGAGCGTATGCAGGTGAGAAACTAATGGAGTTAGGTTCAGAAGAATCGTCTGCTTATGTGTTATTATCTAGTATCTATGCTTCATTGGGAAGGTCTGATGATGTCGAACGAGTGAGACGGGCGATGAAACTTCGAGGGGTGAATAAGGATCCAGGTTGTAGTTGGATTGAATTGAAAAGTCAAGTTCATGTGTTTGTAGTTGGCGACCAGATACATCCAGAGATTGTTAATATACGTGTAGAGTTGAGAAGATTGAGCAAACATATGAAGGATGAGCGTTCTGAATCGCCAGATGATACAGATTCTATCAGATTACCAGCTCAATGA

mRNA sequence

ATGAGTCTTCATCTTCTTCCTCAGCATCGCGCCCTCTTCAATTCGCTCTTACGGTACACAAGTCACAAAGATTTTCAGAAGGGCAAGGCCATCCACGCTCATCTTCTCAGAACTGGTTCAATCTCCTCAGTTTACCTTTCTAACAGCCTTGTTAACTTGTATGCTAAATGCGGAAGCCTTGTGAAGGCCAAGCTTGTCTTCGACAGTATAACCAACAAAGACGTGGTTTCATGGAATTCTTTAATCAATGCCTACTCTCAACAGGGTCCCGTTGGATCTTCGTTTGTAATGGAGCTTTTTCAGAGAATGAGGGCGGAGAACACGCTGCCGAATGCCCATACTTTTGCTGGGGTTTTCACGGCTGCTTCAAGTTTATTCGAAACTTTAGGTGGCTTACAGGCCCATGCGCTTTCTATCAAGACTTCTAGCTTTTATGATGTTTTTGTTGGCAGTTCGCTTCTCAATATGTATTGCAAAATTGGGTGTTTACTGGATGCTCGTAAGGTGTTCGACAGAATGCCAGAGAGAAATTCTGTTTCGTGGGCTACTATGATTTCGGGGTATGCAATGCAAAGGAAGGCGTTTGAGGCTTGGGAATTGTTTTTATTAATGTGCCGTGGAGAGGGAATTCATAATGAGTTTATCTATACCAGTGTGCTTAGTGGACTGACGGTTCCTGAACTTGTTGACTCTGGTAAGCAAATTCATTGTCTTGCCCTTAAAAATGGATTGTTATCGATTGTTTCTGTAGGGAACGCTCTTGTTACAATGTATGCTAAATGTGGGTGCTTAGATGATGCACTTAAAACATTTGAATTGTCTGGTGATAAGAACTCTATTACATGGTCAGCTATGATAACTGGATATGCACAAGCTGGGAACTCGCATGAGGCCTTGAAGTTGTTTTCTTATATGCATTTTAATGGGAATAAGCCTAGTGAGTTTACTTTTGTTGGGGTGATCAATGCTTGTAGTGACTTGGGTGCTCTGGAAGAAGGGAAACAAATGCATGGTTATTCCTTGAAGATGGGATATGAATCCCAAATCTATATAATCACAGCTTTAGTTGATATGTATGCTAAATCTGGAAGCCTAGTTGATGCGCGAAAGGGGTTCGATTACTTAAAAGAACCCGATATTGTTTTGTGGACGTCCATGATTGGAGGATATGTTCAAAATGGTGAAAATGAAACTGCTTTGACTCTGTATTGTAGAATGCAAATGGAAGGGATTATGCCAAATGAGTTAACCATGGCTAGTGTCTTGAGAGCATGTTCAAGCCTTGCTGCTTTAGAACAAGGTAAGCAAATCCATGCCCGTACAATTAAGTATGGATTCAATCTAGAAGTTCCAGTTGGGAGTGCACTTTCAACCATGTATGCAAAGTGTGGTAGTTTAGAAGATGGGAACCTGGTGTTTAGGCGGATGCCTACTAGAGATATTGTGTCATGGAATGCAATGATATCCGGTCTTTCTCAAAACGGAGAGGGTCTTAAGGCCCTTGAACTCTTCGAAGAGATGCGACAAGGCCTGACAAAACCCGACTACGTTACTTTCGTGAACATTCTTTCTGCGTGCAGCCACATGGGATTGGTGGAAAGAGGTAAGGTCTATTTCAAGATGATGCTTGATGAGTTCGGCATTGTTCCAAGAGTCGAGCATTATGCTTGCATGGTAGACATTCTAAGCCGTGCAGGTAAGCTACTGGAAGCGAAAGAGTTCATAGAATCTGCGACGATTGATCACGGTATGTATCTATGGCGTATCTTGCTAGGAGCGTGTCGAAACTATCGAAATTATGAATTAGGAGCGTATGCAGGTGAGAAACTAATGGAGTTAGGTTCAGAAGAATCGTCTGCTTATGTGTTATTATCTAGTATCTATGCTTCATTGGGAAGGTCTGATGATGTCGAACGAGTGAGACGGGCGATGAAACTTCGAGGGGTGAATAAGGATCCAGGTTGTAGTTGGATTGAATTGAAAAGTCAAGTTCATGTGTTTGTAGTTGGCGACCAGATACATCCAGAGATTGTTAATATACGTGTAGAGTTGAGAAGATTGAGCAAACATATGAAGGATGAGCGTTCTGAATCGCCAGATGATACAGATTCTATCAGATTACCAGCTCAATGA

Coding sequence (CDS)

ATGAGTCTTCATCTTCTTCCTCAGCATCGCGCCCTCTTCAATTCGCTCTTACGGTACACAAGTCACAAAGATTTTCAGAAGGGCAAGGCCATCCACGCTCATCTTCTCAGAACTGGTTCAATCTCCTCAGTTTACCTTTCTAACAGCCTTGTTAACTTGTATGCTAAATGCGGAAGCCTTGTGAAGGCCAAGCTTGTCTTCGACAGTATAACCAACAAAGACGTGGTTTCATGGAATTCTTTAATCAATGCCTACTCTCAACAGGGTCCCGTTGGATCTTCGTTTGTAATGGAGCTTTTTCAGAGAATGAGGGCGGAGAACACGCTGCCGAATGCCCATACTTTTGCTGGGGTTTTCACGGCTGCTTCAAGTTTATTCGAAACTTTAGGTGGCTTACAGGCCCATGCGCTTTCTATCAAGACTTCTAGCTTTTATGATGTTTTTGTTGGCAGTTCGCTTCTCAATATGTATTGCAAAATTGGGTGTTTACTGGATGCTCGTAAGGTGTTCGACAGAATGCCAGAGAGAAATTCTGTTTCGTGGGCTACTATGATTTCGGGGTATGCAATGCAAAGGAAGGCGTTTGAGGCTTGGGAATTGTTTTTATTAATGTGCCGTGGAGAGGGAATTCATAATGAGTTTATCTATACCAGTGTGCTTAGTGGACTGACGGTTCCTGAACTTGTTGACTCTGGTAAGCAAATTCATTGTCTTGCCCTTAAAAATGGATTGTTATCGATTGTTTCTGTAGGGAACGCTCTTGTTACAATGTATGCTAAATGTGGGTGCTTAGATGATGCACTTAAAACATTTGAATTGTCTGGTGATAAGAACTCTATTACATGGTCAGCTATGATAACTGGATATGCACAAGCTGGGAACTCGCATGAGGCCTTGAAGTTGTTTTCTTATATGCATTTTAATGGGAATAAGCCTAGTGAGTTTACTTTTGTTGGGGTGATCAATGCTTGTAGTGACTTGGGTGCTCTGGAAGAAGGGAAACAAATGCATGGTTATTCCTTGAAGATGGGATATGAATCCCAAATCTATATAATCACAGCTTTAGTTGATATGTATGCTAAATCTGGAAGCCTAGTTGATGCGCGAAAGGGGTTCGATTACTTAAAAGAACCCGATATTGTTTTGTGGACGTCCATGATTGGAGGATATGTTCAAAATGGTGAAAATGAAACTGCTTTGACTCTGTATTGTAGAATGCAAATGGAAGGGATTATGCCAAATGAGTTAACCATGGCTAGTGTCTTGAGAGCATGTTCAAGCCTTGCTGCTTTAGAACAAGGTAAGCAAATCCATGCCCGTACAATTAAGTATGGATTCAATCTAGAAGTTCCAGTTGGGAGTGCACTTTCAACCATGTATGCAAAGTGTGGTAGTTTAGAAGATGGGAACCTGGTGTTTAGGCGGATGCCTACTAGAGATATTGTGTCATGGAATGCAATGATATCCGGTCTTTCTCAAAACGGAGAGGGTCTTAAGGCCCTTGAACTCTTCGAAGAGATGCGACAAGGCCTGACAAAACCCGACTACGTTACTTTCGTGAACATTCTTTCTGCGTGCAGCCACATGGGATTGGTGGAAAGAGGTAAGGTCTATTTCAAGATGATGCTTGATGAGTTCGGCATTGTTCCAAGAGTCGAGCATTATGCTTGCATGGTAGACATTCTAAGCCGTGCAGGTAAGCTACTGGAAGCGAAAGAGTTCATAGAATCTGCGACGATTGATCACGGTATGTATCTATGGCGTATCTTGCTAGGAGCGTGTCGAAACTATCGAAATTATGAATTAGGAGCGTATGCAGGTGAGAAACTAATGGAGTTAGGTTCAGAAGAATCGTCTGCTTATGTGTTATTATCTAGTATCTATGCTTCATTGGGAAGGTCTGATGATGTCGAACGAGTGAGACGGGCGATGAAACTTCGAGGGGTGAATAAGGATCCAGGTTGTAGTTGGATTGAATTGAAAAGTCAAGTTCATGTGTTTGTAGTTGGCGACCAGATACATCCAGAGATTGTTAATATACGTGTAGAGTTGAGAAGATTGAGCAAACATATGAAGGATGAGCGTTCTGAATCGCCAGATGATACAGATTCTATCAGATTACCAGCTCAATGA
BLAST of CmoCh12G003340 vs. Swiss-Prot
Match: PP181_ARATH (Pentatricopeptide repeat-containing protein At2g33680 OS=Arabidopsis thaliana GN=PCMP-E19 PE=3 SV=1)

HSP 1 Score: 828.6 bits (2139), Expect = 5.3e-239
Identity = 413/693 (59.60%), Postives = 519/693 (74.89%), Query Frame = 1

Query: 5   LLPQHRALFNSLLRYTSHKDFQKGKAIHAHLLRTGSISSVYLSNSLVNLYAKCGSLVKAK 64
           L P    L   L  ++  ++   G+A+H  ++RTG+ + +  +N LVN YAKCG L KA 
Sbjct: 10  LNPHTSTLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAH 69

Query: 65  LVFDSITNKDVVSWNSLINAYSQQGPVGSSF-VMELFQRMRAENTLPNAHTFAGVFTAAS 124
            +F++I  KDVVSWNSLI  YSQ G + SS+ VM+LF+ MRA++ LPNA+T AG+F A S
Sbjct: 70  SIFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAES 129

Query: 125 SLFETLGGLQAHALSIKTSSFYDVFVGSSLLNMYCKIGCLLDARKVFDRMPERNSVSWAT 184
           SL  +  G QAHAL +K SSF D++V +SL+ MYCK G + D  KVF  MPERN+ +W+T
Sbjct: 130 SLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWST 189

Query: 185 MISGYAMQRKAFEAWELFLLMCRG--EGIHNEFIYTSVLSGLTVPELVDSGKQIHCLALK 244
           M+SGYA + +  EA ++F L  R   EG  +++++T+VLS L     V  G+QIHC+ +K
Sbjct: 190 MVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAATIYVGLGRQIHCITIK 249

Query: 245 NGLLSIVSVGNALVTMYAKCGCLDDALKTFELSGDKNSITWSAMITGYAQAGNSHEALKL 304
           NGLL  V++ NALVTMY+KC  L++A K F+ SGD+NSITWSAM+TGY+Q G S EA+KL
Sbjct: 250 NGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKL 309

Query: 305 FSYMHFNGNKPSEFTFVGVINACSDLGALEEGKQMHGYSLKMGYESQIYIITALVDMYAK 364
           FS M   G KPSE+T VGV+NACSD+  LEEGKQ+H + LK+G+E  ++  TALVDMYAK
Sbjct: 310 FSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAK 369

Query: 365 SGSLVDARKGFDYLKEPDIVLWTSMIGGYVQNGENETALTLYCRMQMEGIMPNELTMASV 424
           +G L DARKGFD L+E D+ LWTS+I GYVQN +NE AL LY RM+  GI+PN+ TMASV
Sbjct: 370 AGCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASV 429

Query: 425 LRACSSLAALEQGKQIHARTIKYGFNLEVPVGSALSTMYAKCGSLEDGNLVFRRMPTRDI 484
           L+ACSSLA LE GKQ+H  TIK+GF LEVP+GSALSTMY+KCGSLEDGNLVFRR P +D+
Sbjct: 430 LKACSSLATLELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKDV 489

Query: 485 VSWNAMISGLSQNGEGLKALELFEEMRQGLTKPDYVTFVNILSACSHMGLVERGKVYFKM 544
           VSWNAMISGLS NG+G +ALELFEEM     +PD VTFVNI+SACSH G VERG  YF M
Sbjct: 490 VSWNAMISGLSHNGQGDEALELFEEMLAEGMEPDDVTFVNIISACSHKGFVERGWFYFNM 549

Query: 545 MLDEFGIVPRVEHYACMVDILSRAGKLLEAKEFIESATIDHGMYLWRILLGACRNYRNYE 604
           M D+ G+ P+V+HYACMVD+LSRAG+L EAKEFIESA IDHG+ LWRILL AC+N+   E
Sbjct: 550 MSDQIGLDPKVDHYACMVDLLSRAGQLKEAKEFIESANIDHGLCLWRILLSACKNHGKCE 609

Query: 605 LGAYAGEKLMELGSEESSAYVLLSSIYASLGRSDDVERVRRAMKLRGVNKDPGCSWIELK 664
           LG YAGEKLM LGS ESS YV LS IY +LGR  DVERV + M+  GV+K+ GCSWIELK
Sbjct: 610 LGVYAGEKLMALGSRESSTYVQLSGIYTALGRMRDVERVWKHMRANGVSKEVGCSWIELK 669

Query: 665 SQVHVFVVGDQIHPEIVNIRVELRRLSKHMKDE 695
           +Q HVFVVGD +HP I   +  +  +S+ M +E
Sbjct: 670 NQYHVFVVGDTMHPMIEETKDLVCLVSRQMIEE 702

BLAST of CmoCh12G003340 vs. Swiss-Prot
Match: PP220_ARATH (Pentatricopeptide repeat-containing protein At3g09040, mitochondrial OS=Arabidopsis thaliana GN=PCMP-E88 PE=2 SV=1)

HSP 1 Score: 483.4 bits (1243), Expect = 4.2e-135
Identity = 262/676 (38.76%), Postives = 399/676 (59.02%), Query Frame = 1

Query: 28   GKAIHAHLLRTGSISSVYLSNSLVNLYAKCGSLVKAKLVFDSITNKDVVSWNSLINAYSQ 87
            G  +HA  ++ G  S++Y+ +SLV++Y+KC  +  A  VF+++  K+ V WN++I  Y+ 
Sbjct: 346  GLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAH 405

Query: 88   QGPVGSSFVMELFQRMRAENTLPNAHTFAGVFTAASSLFETLGGLQAHALSIKTSSFYDV 147
             G   S  VMELF  M++     +  TF  + +  ++  +   G Q H++ IK     ++
Sbjct: 406  NGE--SHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNL 465

Query: 148  FVGSSLLNMYCKIGCLLDARKVFDRMPERNSVSWATMISGYAMQRKAFEAWELFLLMCRG 207
            FVG++L++MY K G L DAR++F+RM +R++V+W T+I  Y       EA++LF  M   
Sbjct: 466  FVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLC 525

Query: 208  EGIHNEFIYTSVLSGLTVPELVDSGKQIHCLALKNGLLSIVSVGNALVTMYAKCGCLDDA 267
              + +     S L   T    +  GKQ+HCL++K GL   +  G++L+ MY+KCG + DA
Sbjct: 526  GIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDA 585

Query: 268  LKTFELSGDKNSITWSAMITGYAQAGNSHEALKLFSYMHFNGNKPSEFTFVGVINACSDL 327
             K F    + + ++ +A+I GY+Q  N  EA+ LF  M   G  PSE TF  ++ AC   
Sbjct: 586  RKVFSSLPEWSVVSMNALIAGYSQ-NNLEEAVVLFQEMLTRGVNPSEITFATIVEACHKP 645

Query: 328  GALEEGKQMHGYSLKMGYESQ-IYIITALVDMYAKSGSLVDARKGFDYLKEP-DIVLWTS 387
             +L  G Q HG   K G+ S+  Y+  +L+ MY  S  + +A   F  L  P  IVLWT 
Sbjct: 646  ESLTLGTQFHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEACALFSELSSPKSIVLWTG 705

Query: 388  MIGGYVQNGENETALTLYCRMQMEGIMPNELTMASVLRACSSLAALEQGKQIHARTIKYG 447
            M+ G+ QNG  E AL  Y  M+ +G++P++ T  +VLR CS L++L +G+ IH+      
Sbjct: 706  MMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLA 765

Query: 448  FNLEVPVGSALSTMYAKCGSLEDGNLVFRRMPTR-DIVSWNAMISGLSQNGEGLKALELF 507
             +L+    + L  MYAKCG ++  + VF  M  R ++VSWN++I+G ++NG    AL++F
Sbjct: 766  HDLDELTSNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLINGYAKNGYAEDALKIF 825

Query: 508  EEMRQGLTKPDYVTFVNILSACSHMGLVERGKVYFKMMLDEFGIVPRVEHYACMVDILSR 567
            + MRQ    PD +TF+ +L+ACSH G V  G+  F+MM+ ++GI  RV+H ACMVD+L R
Sbjct: 826  DSMRQSHIMPDEITFLGVLTACSHAGKVSDGRKIFEMMIGQYGIEARVDHVACMVDLLGR 885

Query: 568  AGKLLEAKEFIESATIDHGMYLWRILLGACRNYRNYELGAYAGEKLMELGSEESSAYVLL 627
             G L EA +FIE+  +     LW  LLGACR + +   G  + EKL+EL  + SSAYVLL
Sbjct: 886  WGYLQEADDFIEAQNLKPDARLWSSLLGACRIHGDDIRGEISAEKLIELEPQNSSAYVLL 945

Query: 628  SSIYASLGRSDDVERVRRAMKLRGVNKDPGCSWIELKSQVHVFVVGDQIHPEIVNIRVEL 687
            S+IYAS G  +    +R+ M+ RGV K PG SWI+++ + H+F  GD+ H EI  I + L
Sbjct: 946  SNIYASQGCWEKANALRKVMRDRGVKKVPGYSWIDVEQRTHIFAAGDKSHSEIGKIEMFL 1005

Query: 688  RRLSKHMKDERSESPD 701
              L   MKD+   +PD
Sbjct: 1006 EDLYDLMKDDAVVNPD 1018

BLAST of CmoCh12G003340 vs. Swiss-Prot
Match: PP172_ARATH (Pentatricopeptide repeat-containing protein At2g27610 OS=Arabidopsis thaliana GN=PCMP-H60 PE=2 SV=1)

HSP 1 Score: 461.8 bits (1187), Expect = 1.3e-128
Identity = 255/686 (37.17%), Postives = 401/686 (58.45%), Query Frame = 1

Query: 11  ALFNSLLRYTSHK-DFQKGKAIHAHLLRTGSISSVYLSNSLVNLYAKCGSLVKAKLVFDS 70
           ++F+S+L+ ++   D   G+ +H   ++ G +  V +  SLV+ Y K  +    + VFD 
Sbjct: 94  SIFSSVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDE 153

Query: 71  ITNKDVVSWNSLINAYSQQGPVGSSFVMELFQRMRAENTLPNAHTFAGVFTAASSLFETL 130
           +  ++VV+W +LI+ Y++     +  V+ LF RM+ E T PN+ TFA      +      
Sbjct: 154 MKERNVVTWTTLISGYARNSM--NDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGG 213

Query: 131 GGLQAHALSIKTSSFYDVFVGSSLLNMYCKIGCLLDARKVFDRMPERNSVSWATMISGYA 190
            GLQ H + +K      + V +SL+N+Y K G +  AR +FD+   ++ V+W +MISGYA
Sbjct: 214 RGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYA 273

Query: 191 MQRKAFEAWELFLLMCRGEGIHNEFIYTSVLSGLTVPELVDSGKQIHCLALKNGLLSIVS 250
                 EA  +F  M       +E  + SV+      + +   +Q+HC  +K G L   +
Sbjct: 274 ANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQN 333

Query: 251 VGNALVTMYAKCGCLDDALKTF-ELSGDKNSITWSAMITGYAQAGNSHEALKLFSYMHFN 310
           +  AL+  Y+KC  + DAL+ F E+    N ++W+AMI+G+ Q     EA+ LFS M   
Sbjct: 334 IRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRK 393

Query: 311 GNKPSEFTFVGVINACSDLGALEEGKQMHGYSLKMGYESQIYIITALVDMYAKSGSLVDA 370
           G +P+EFT+  ++ A   +   E    +H   +K  YE    + TAL+D Y K G + +A
Sbjct: 394 GVRPNEFTYSVILTALPVISPSE----VHAQVVKTNYERSSTVGTALLDAYVKLGKVEEA 453

Query: 371 RKGFDYLKEPDIVLWTSMIGGYVQNGENETALTLYCRMQMEGIMPNELTMASVLRACSSL 430
            K F  + + DIV W++M+ GY Q GE E A+ ++  +   GI PNE T +S+L  C++ 
Sbjct: 454 AKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAAT 513

Query: 431 -AALEQGKQIHARTIKYGFNLEVPVGSALSTMYAKCGSLEDGNLVFRRMPTRDIVSWNAM 490
            A++ QGKQ H   IK   +  + V SAL TMYAK G++E    VF+R   +D+VSWN+M
Sbjct: 514 NASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSM 573

Query: 491 ISGLSQNGEGLKALELFEEMRQGLTKPDYVTFVNILSACSHMGLVERGKVYFKMMLDEFG 550
           ISG +Q+G+ +KAL++F+EM++   K D VTF+ + +AC+H GLVE G+ YF +M+ +  
Sbjct: 574 ISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCK 633

Query: 551 IVPRVEHYACMVDILSRAGKLLEAKEFIESATIDHGMYLWRILLGACRNYRNYELGAYAG 610
           I P  EH +CMVD+ SRAG+L +A + IE+     G  +WR +L ACR ++  ELG  A 
Sbjct: 634 IAPTKEHNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTILAACRVHKKTELGRLAA 693

Query: 611 EKLMELGSEESSAYVLLSSIYASLGRSDDVERVRRAMKLRGVNKDPGCSWIELKSQVHVF 670
           EK++ +  E+S+AYVLLS++YA  G   +  +VR+ M  R V K+PG SWIE+K++ + F
Sbjct: 694 EKIIAMKPEDSAAYVLLSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWIEVKNKTYSF 753

Query: 671 VVGDQIHPEIVNIRVELRRLSKHMKD 694
           + GD+ HP    I ++L  LS  +KD
Sbjct: 754 LAGDRSHPLKDQIYMKLEDLSTRLKD 773

BLAST of CmoCh12G003340 vs. Swiss-Prot
Match: PP357_ARATH (Pentatricopeptide repeat-containing protein At4g39530 OS=Arabidopsis thaliana GN=PCMP-E52 PE=3 SV=1)

HSP 1 Score: 456.1 bits (1172), Expect = 7.2e-127
Identity = 242/648 (37.35%), Postives = 378/648 (58.33%), Query Frame = 1

Query: 31  IHAHLLRTGSISSVYLSNSLVNLYAKCGSLVKAKLVFDSITNKDVVSWNSLINAYSQQGP 90
           + + L+++G    VY+   L++ Y K G++  A+LVFD++  K  V+W ++I+   +   
Sbjct: 170 LQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVK--- 229

Query: 91  VGSSFV-MELFQRMRAENTLPNAHTFAGVFTAASSLFETLGGLQAHALSIKTSSFYDVFV 150
           +G S+V ++LF ++  +N +P+ +  + V +A S L    GG Q HA  ++     D  +
Sbjct: 230 MGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASL 289

Query: 151 GSSLLNMYCKIGCLLDARKVFDRMPERNSVSWATMISGYAMQRKAFEAWELFLLMCRGEG 210
            + L++ Y K G ++ A K+F+ MP +N +SW T++SGY       EA ELF  M +   
Sbjct: 290 MNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGL 349

Query: 211 IHNEFIYTSVLSGLTVPELVDSGKQIHCLALKNGLLSIVSVGNALVTMYAKCGCLDDALK 270
             + +  +S+L+       +  G Q+H   +K  L +   V N+L+ MYAKC CL DA K
Sbjct: 350 KPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARK 409

Query: 271 TFELSGDKNSITWSAMITGYAQAGNS---HEALKLFSYMHFNGNKPSEFTFVGVINACSD 330
            F++    + + ++AMI GY++ G     HEAL +F  M F   +PS  TFV ++ A + 
Sbjct: 410 VFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASAS 469

Query: 331 LGALEEGKQMHGYSLKMGYESQIYIITALVDMYAKSGSLVDARKGFDYLKEPDIVLWTSM 390
           L +L   KQ+HG   K G    I+  +AL+D+Y+    L D+R  FD +K  D+V+W SM
Sbjct: 470 LTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSM 529

Query: 391 IGGYVQNGENETALTLYCRMQMEGIMPNELTMASVLRACSSLAALEQGKQIHARTIKYGF 450
             GYVQ  ENE AL L+  +Q+    P+E T A+++ A  +LA+++ G++ H + +K G 
Sbjct: 530 FAGYVQQSENEEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGL 589

Query: 451 NLEVPVGSALSTMYAKCGSLEDGNLVFRRMPTRDIVSWNAMISGLSQNGEGLKALELFEE 510
                + +AL  MYAKCGS ED +  F    +RD+V WN++IS  + +GEG KAL++ E+
Sbjct: 590 ECNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGKKALQMLEK 649

Query: 511 MRQGLTKPDYVTFVNILSACSHMGLVERGKVYFKMMLDEFGIVPRVEHYACMVDILSRAG 570
           M     +P+Y+TFV +LSACSH GLVE G   F++ML  FGI P  EHY CMV +L RAG
Sbjct: 650 MMSEGIEPNYITFVGVLSACSHAGLVEDGLKQFELML-RFGIEPETEHYVCMVSLLGRAG 709

Query: 571 KLLEAKEFIESATIDHGMYLWRILLGACRNYRNYELGAYAGEKLMELGSEESSAYVLLSS 630
           +L +A+E IE         +WR LL  C    N EL  +A E  +    ++S ++ +LS+
Sbjct: 710 RLNKARELIEKMPTKPAAIVWRSLLSGCAKAGNVELAEHAAEMAILSDPKDSGSFTMLSN 769

Query: 631 IYASLGRSDDVERVRRAMKLRGVNKDPGCSWIELKSQVHVFVVGDQIH 675
           IYAS G   + ++VR  MK+ GV K+PG SWI +  +VH+F+  D+ H
Sbjct: 770 IYASKGMWTEAKKVRERMKVEGVVKEPGRSWIGINKEVHIFLSKDKSH 813

BLAST of CmoCh12G003340 vs. Swiss-Prot
Match: PP307_ARATH (Pentatricopeptide repeat-containing protein At4g13650 OS=Arabidopsis thaliana GN=PCMP-H42 PE=2 SV=2)

HSP 1 Score: 453.4 bits (1165), Expect = 4.7e-126
Identity = 247/691 (35.75%), Postives = 386/691 (55.86%), Query Frame = 1

Query: 3   LHLLPQHRALFNSLLRYTSHKDFQKGKAIHAHLLRTGSISSVYLSNSLVNLYAKCGSLVK 62
           L ++P   A  + L      +  + G+ +H  +L+ G  S  Y+ N+LV+LY   G+L+ 
Sbjct: 282 LGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLIS 341

Query: 63  AKLVFDSITNKDVVSWNSLINAYSQQGPVGSSFVMELFQRMRAENTLPNAHTFAGVFTAA 122
           A+ +F +++ +D V++N+LIN  SQ G       MELF+RM  +   P+++T A +  A 
Sbjct: 342 AEHIFSNMSQRDAVTYNTLINGLSQCGY--GEKAMELFKRMHLDGLEPDSNTLASLVVAC 401

Query: 123 SSLFETLGGLQAHALSIKTSSFYDVFVGSSLLNMYCKIGCLLDARKVFDRMPERNSVSWA 182
           S+      G Q HA + K     +  +  +LLN+Y K   +  A   F      N V W 
Sbjct: 402 SADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWN 461

Query: 183 TMISGYAMQRKAFEAWELFLLMCRGEGIHNEFIYTSVLSGLTVPELVDSGKQIHCLALKN 242
            M+  Y +      ++ +F  M   E + N++ Y S+L        ++ G+QIH   +K 
Sbjct: 462 VMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKT 521

Query: 243 GLLSIVSVGNALVTMYAKCGCLDDALKTFELSGDKNSITWSAMITGYAQAGNSHEALKLF 302
                  V + L+ MYAK G LD A         K+ ++W+ MI GY Q     +AL  F
Sbjct: 522 NFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTF 581

Query: 303 SYMHFNGNKPSEFTFVGVINACSDLGALEEGKQMHGYSLKMGYESQIYIITALVDMYAKS 362
             M   G +  E      ++AC+ L AL+EG+Q+H  +   G+ S +    ALV +Y++ 
Sbjct: 582 RQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRC 641

Query: 363 GSLVDARKGFDYLKEPDIVLWTSMIGGYVQNGENETALTLYCRMQMEGIMPNELTMASVL 422
           G + ++   F+  +  D + W +++ G+ Q+G NE AL ++ RM  EGI  N  T  S +
Sbjct: 642 GKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAV 701

Query: 423 RACSSLAALEQGKQIHARTIKYGFNLEVPVGSALSTMYAKCGSLEDGNLVFRRMPTRDIV 482
           +A S  A ++QGKQ+HA   K G++ E  V +AL +MYAKCGS+ D    F  + T++ V
Sbjct: 702 KAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEV 761

Query: 483 SWNAMISGLSQNGEGLKALELFEEMRQGLTKPDYVTFVNILSACSHMGLVERGKVYFKMM 542
           SWNA+I+  S++G G +AL+ F++M     +P++VT V +LSACSH+GLV++G  YF+ M
Sbjct: 762 SWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESM 821

Query: 543 LDEFGIVPRVEHYACMVDILSRAGKLLEAKEFIESATIDHGMYLWRILLGACRNYRNYEL 602
             E+G+ P+ EHY C+VD+L+RAG L  AKEFI+   I     +WR LL AC  ++N E+
Sbjct: 822 NSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHKNMEI 881

Query: 603 GAYAGEKLMELGSEESSAYVLLSSIYASLGRSDDVERVRRAMKLRGVNKDPGCSWIELKS 662
           G +A   L+EL  E+S+ YVLLS++YA   + D  +  R+ MK +GV K+PG SWIE+K+
Sbjct: 882 GEFAAHHLLELEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEKGVKKEPGQSWIEVKN 941

Query: 663 QVHVFVVGDQIHPEIVNIRVELRRLSKHMKD 694
            +H F VGDQ HP    I    + L+K   +
Sbjct: 942 SIHSFYVGDQNHPLADEIHEYFQDLTKRASE 970

BLAST of CmoCh12G003340 vs. TrEMBL
Match: A0A0A0LK41_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G348180 PE=4 SV=1)

HSP 1 Score: 1221.5 bits (3159), Expect = 0.0e+00
Identity = 607/708 (85.73%), Postives = 651/708 (91.95%), Query Frame = 1

Query: 1   MSLHLLP-QHRALFNSLLRYTSHKDFQKGKAIHAHLLRTGSISSVYLSNSLVNLYAKCGS 60
           M+L+LLP QHR+  + LLR T  KD QKGKAIHA LLRTGS SSVYL+NSLVNLYAKCGS
Sbjct: 86  MNLYLLPPQHRSFVDLLLRCTRQKDLQKGKAIHAQLLRTGSFSSVYLTNSLVNLYAKCGS 145

Query: 61  LVKAKLVFDSITNKDVVSWNSLINAYSQQGPVGSSFVMELFQRMRAENTLPNAHTFAGVF 120
           +VKAKLVF+SITNKDVVSWN LIN YSQ+G VG SFVMELFQRMRAENTLPN HTF+GVF
Sbjct: 146 IVKAKLVFESITNKDVVSWNCLINGYSQKGTVGYSFVMELFQRMRAENTLPNGHTFSGVF 205

Query: 121 TAASSLFETLGGLQAHALSIKTSSFYDVFVGSSLLNMYCKIGCLLDARKVFDRMPERNSV 180
           TAASS  ET GGLQAHAL+IKTS+FYDVFVGSSL+NMYCKIGC+LDARKVFD +PERN+V
Sbjct: 206 TAASSSPETFGGLQAHALAIKTSNFYDVFVGSSLINMYCKIGCMLDARKVFDTIPERNTV 265

Query: 181 SWATMISGYAMQRKAFEAWELFLLMCRGEGIHNEFIYTSVLSGLTVPELVDSGKQIHCLA 240
           SWAT+ISGYAM+R AFEAWELFLLM R EG H++FIYTSVLS LTVP+LV  GKQIHCLA
Sbjct: 266 SWATIISGYAMERMAFEAWELFLLMRREEGAHDKFIYTSVLSALTVPDLVHYGKQIHCLA 325

Query: 241 LKNGLLSIVSVGNALVTMYAKCGCLDDALKTFELSGDKNSITWSAMITGYAQAGNSHEAL 300
           LKNGLLSI SVGNALVTMY KCGCLDDA KTFELSGDK+ ITWSAMITGYAQAG+SHEAL
Sbjct: 326 LKNGLLSIASVGNALVTMYGKCGCLDDAFKTFELSGDKDDITWSAMITGYAQAGDSHEAL 385

Query: 301 KLFSYMHFNGNKPSEFTFVGVINACSDLGALEEGKQMHGYSLKMGYESQIYIITALVDMY 360
            LF  MH NGNKPSEFTFVGVINACSD+GALEEGKQ+HGYSLK GYE QIY +TALVDMY
Sbjct: 386 NLFYNMHLNGNKPSEFTFVGVINACSDIGALEEGKQIHGYSLKAGYECQIYFMTALVDMY 445

Query: 361 AKSGSLVDARKGFDYLKEPDIVLWTSMIGGYVQNGENETALTLYCRMQMEGIMPNELTMA 420
           AK GSLVDARKGFDYLKEPDIVLWTSMI GY QNGENETALTLYCRMQME IMP+ELTMA
Sbjct: 446 AKCGSLVDARKGFDYLKEPDIVLWTSMISGYAQNGENETALTLYCRMQMERIMPHELTMA 505

Query: 421 SVLRACSSLAALEQGKQIHARTIKYGFNLEVPVGSALSTMYAKCGSLEDGNLVFRRMPTR 480
           SVLRACSSLAALEQGKQIHA+TIKYGF+LEVP+GSALSTMYAKCGSLEDGNLVFRRMP+R
Sbjct: 506 SVLRACSSLAALEQGKQIHAQTIKYGFSLEVPIGSALSTMYAKCGSLEDGNLVFRRMPSR 565

Query: 481 DIVSWNAMISGLSQNGEGLKALELFEEMRQGLTKPDYVTFVNILSACSHMGLVERGKVYF 540
           DI++WNAMISGLSQNGEGLKALELFEE+R G TKPDYVTFVN+LSACSHMGLVERGKVYF
Sbjct: 566 DIMTWNAMISGLSQNGEGLKALELFEELRHGTTKPDYVTFVNVLSACSHMGLVERGKVYF 625

Query: 541 KMMLDEFGIVPRVEHYACMVDILSRAGKLLEAKEFIESATIDHGMYLWRILLGACRNYRN 600
           +MMLDEFGI+PRVEHYACMVDILSRAGKL E KEFIESATIDHGM LWRILLGACRNYRN
Sbjct: 626 RMMLDEFGIIPRVEHYACMVDILSRAGKLHETKEFIESATIDHGMCLWRILLGACRNYRN 685

Query: 601 YELGAYAGEKLMELGSEESSAYVLLSSIYASLGRSDDVERVRRAMKLRGVNKDPGCSWIE 660
           YELGAYAGEKLMELGS+ESSAY+LLSSIY +LGRSDDVERVRR MKLRGVNK+PGCSWIE
Sbjct: 686 YELGAYAGEKLMELGSQESSAYILLSSIYTALGRSDDVERVRRLMKLRGVNKEPGCSWIE 745

Query: 661 LKSQVHVFVVGDQIHPEIVNIRVELRRLSKHMKDERSESPDDTDSIRL 708
           LKSQVHVFVVGDQIHP+IV I  ELRRL  HMKDE  ES +DT+S+ L
Sbjct: 746 LKSQVHVFVVGDQIHPQIVKICSELRRLRDHMKDECYESFNDTNSMTL 793

BLAST of CmoCh12G003340 vs. TrEMBL
Match: E0CQU2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0001g00570 PE=4 SV=1)

HSP 1 Score: 1072.8 bits (2773), Expect = 1.5e-310
Identity = 539/702 (76.78%), Postives = 607/702 (86.47%), Query Frame = 1

Query: 6   LPQHRALFNSLLRYTSHKDFQKGKAIHAHLLRTGSISSVYLSNSLVNLYAKCGSLVKAKL 65
           LP +R+ F +LL+YT ++  QKGKA+HA ++++ S S VY++NSLVNLYAKC  L +AK 
Sbjct: 3   LPSNRSFFTALLQYTHNRSLQKGKALHAQIIKSSS-SCVYIANSLVNLYAKCQRLREAKF 62

Query: 66  VFDSITNKDVVSWNSLINAYSQQGPVGSSFVMELFQRMRAENTLPNAHTFAGVFTAASSL 125
           VF+ I NKDVVSWN +IN YSQ GP GSS VMELFQRMRAENT PNAHTFAGVFTAAS+L
Sbjct: 63  VFERIQNKDVVSWNCIINGYSQHGPSGSSHVMELFQRMRAENTAPNAHTFAGVFTAASTL 122

Query: 126 FETLGGLQAHALSIKTSSFYDVFVGSSLLNMYCKIGCLLDARKVFDRMPERNSVSWATMI 185
            +  GG  AHA++IK  S  DVFVGSSL+NMYCK G   +ARKVFD MPERNSVSWATMI
Sbjct: 123 VDAAGGRLAHAVAIKMDSCRDVFVGSSLMNMYCKAGLTPEARKVFDTMPERNSVSWATMI 182

Query: 186 SGYAMQRKAFEAWELFLLMCRGEGIHNEFIYTSVLSGLTVPELVDSGKQIHCLALKNGLL 245
           SGYA Q+ A EA  LF LM R E   NEF++TSVLS LT+PELV++GKQIHC+A+KNGLL
Sbjct: 183 SGYASQKLAAEALGLFRLMRREEEGENEFVFTSVLSALTLPELVNNGKQIHCIAVKNGLL 242

Query: 246 SIVSVGNALVTMYAKCGCLDDALKTFELSGDKNSITWSAMITGYAQAGNSHEALKLFSYM 305
           SIVSVGNALVTMYAKCG LDDAL+TFE S DKNSITWSAMITGYAQ+G+S +ALKLFS M
Sbjct: 243 SIVSVGNALVTMYAKCGSLDDALQTFETSSDKNSITWSAMITGYAQSGDSDKALKLFSSM 302

Query: 306 HFNGNKPSEFTFVGVINACSDLGALEEGKQMHGYSLKMGYESQIYIITALVDMYAKSGSL 365
           H +G +PSEFTFVGVINACSDLGA  EGKQ+H Y LK+G+ESQIY++TALVDMYAK  S+
Sbjct: 303 HLSGIRPSEFTFVGVINACSDLGAAWEGKQVHDYLLKLGFESQIYVMTALVDMYAKCSSI 362

Query: 366 VDARKGFDYLKEPDIVLWTSMIGGYVQNGENETALTLYCRMQMEGIMPNELTMASVLRAC 425
           VDARKGFDYL+EPDIVLWTSMIGGYVQNGENE AL+LY RM+MEGI+PNELTMASVL+AC
Sbjct: 363 VDARKGFDYLQEPDIVLWTSMIGGYVQNGENEDALSLYGRMEMEGILPNELTMASVLKAC 422

Query: 426 SSLAALEQGKQIHARTIKYGFNLEVPVGSALSTMYAKCGSLEDGNLVFRRMPTRDIVSWN 485
           SSLAALEQGKQIHART+KYGF LEVP+GSALSTMYAKCG L+DG LVFRRMP RD++SWN
Sbjct: 423 SSLAALEQGKQIHARTVKYGFGLEVPIGSALSTMYAKCGCLKDGTLVFRRMPARDVISWN 482

Query: 486 AMISGLSQNGEGLKALELFEEMRQGLTKPDYVTFVNILSACSHMGLVERGKVYFKMMLDE 545
           AMISGLSQNG G +ALELFEEM+   TKPDYVTFVNILSACSHMGLVERG  YF+MM DE
Sbjct: 483 AMISGLSQNGCGKEALELFEEMQLEGTKPDYVTFVNILSACSHMGLVERGWGYFRMMFDE 542

Query: 546 FGIVPRVEHYACMVDILSRAGKLLEAKEFIESATIDHGMYLWRILLGACRNYRNYELGAY 605
           FG+ PRVEHYACMVDILSRAGKL EA EF ESATIDHGM LWRI+LGACRNYRNYELGAY
Sbjct: 543 FGMDPRVEHYACMVDILSRAGKLKEAIEFTESATIDHGMCLWRIILGACRNYRNYELGAY 602

Query: 606 AGEKLMELGSEESSAYVLLSSIYASLGRSDDVERVRRAMKLRGVNKDPGCSWIELKSQVH 665
           AGEKLMELGS+ESSAYVLLSSIY++LGR +DVERVRR MKLRGV+K+PGCSWIELKS VH
Sbjct: 603 AGEKLMELGSQESSAYVLLSSIYSALGRWEDVERVRRMMKLRGVSKEPGCSWIELKSGVH 662

Query: 666 VFVVGDQIHPEIVNIRVELRRLSKHMKDERSESPDDTDSIRL 708
           VFVV DQ+HP+I +I VELR+LSK MKDE  E   D+ S  L
Sbjct: 663 VFVVKDQMHPQIGDIHVELRQLSKQMKDEGYEPATDSFSAAL 703

BLAST of CmoCh12G003340 vs. TrEMBL
Match: B9R8H7_RICCO (Pentatricopeptide repeat-containing protein, putative OS=Ricinus communis GN=RCOM_1599850 PE=4 SV=1)

HSP 1 Score: 1057.7 bits (2734), Expect = 6.0e-306
Identity = 524/705 (74.33%), Postives = 602/705 (85.39%), Query Frame = 1

Query: 1   MSLHLLPQHRALFNSLLRYTSHKDFQKGKAIHAHLLRTGSISS-VYLSNSLVNLYAKCGS 60
           M LH  PQ+ + FNSL+++T  K  QKG+A+HA +++  S SS +YL+NSL+N YAKC  
Sbjct: 1   MPLH--PQNLSSFNSLVQFTHQKSLQKGRALHAQIIKLASSSSCIYLANSLINFYAKCCH 60

Query: 61  LVKAKLVFDSITNKDVVSWNSLINAYSQQGPVGSSFVMELFQRMRAENTLPNAHTFAGVF 120
           L KAKLVFD I NKDV+SWN LIN YSQQGP GSSFVMELFQRMRA+N LPNAHTF+G+F
Sbjct: 61  LPKAKLVFDRIHNKDVISWNCLINGYSQQGPTGSSFVMELFQRMRADNILPNAHTFSGIF 120

Query: 121 TAASSLFETLGGLQAHALSIKTSSFYDVFVGSSLLNMYCKIGCLLDARKVFDRMPERNSV 180
           TAAS+L     G QAHA++IK + FYDVFVGSSLLNMYCK G L +AR+VFDRMPERN V
Sbjct: 121 TAASNLSSIFFGQQAHAVAIKMACFYDVFVGSSLLNMYCKAGLLFEAREVFDRMPERNEV 180

Query: 181 SWATMISGYAMQRKAFEAWELFLLMCRGEGIHNEFIYTSVLSGLTVPELVDSGKQIHCLA 240
           +WATMISGYA+QR A EA+E+F LM R E   NEF +TSVLS L VPE VDSGKQIHCLA
Sbjct: 181 TWATMISGYAIQRLAGEAFEVFELMRREEEDVNEFAFTSVLSALAVPEFVDSGKQIHCLA 240

Query: 241 LKNGLLSIVSVGNALVTMYAKCGCLDDALKTFELSGDKNSITWSAMITGYAQAGNSHEAL 300
           +K GLL  +S+ NALVTMYAKCG LDD+L+ FE+S DKNSITWSAMITGYAQ+G+SH+AL
Sbjct: 241 VKTGLLVFLSILNALVTMYAKCGSLDDSLQVFEMSNDKNSITWSAMITGYAQSGDSHKAL 300

Query: 301 KLFSYMHFNGNKPSEFTFVGVINACSDLGALEEGKQMHGYSLKMGYESQIYIITALVDMY 360
           KLFS MHF G  PSEFT VGV+NACSD  A+EEGKQ+H Y LK+G+ESQ+YI+TALVDMY
Sbjct: 301 KLFSRMHFAGINPSEFTLVGVLNACSDACAVEEGKQVHNYLLKLGFESQLYIMTALVDMY 360

Query: 361 AKSGSLVDARKGFDYLKEPDIVLWTSMIGGYVQNGENETALTLYCRMQMEGIMPNELTMA 420
           AKSG   DARKGF+YL++PD+VLWTSMI GYVQNGENE AL+LYCRMQMEGI+PNELTMA
Sbjct: 361 AKSGVTEDARKGFNYLQQPDLVLWTSMIAGYVQNGENEDALSLYCRMQMEGILPNELTMA 420

Query: 421 SVLRACSSLAALEQGKQIHARTIKYGFNLEVPVGSALSTMYAKCGSLEDGNLVFRRMPTR 480
           SVL+ACS+LAA +QG+QIHARTIKYG  LEV +GSALSTMYAKCG+LE+GN+VFRRMP R
Sbjct: 421 SVLKACSNLAAFDQGRQIHARTIKYGLGLEVTIGSALSTMYAKCGNLEEGNIVFRRMPER 480

Query: 481 DIVSWNAMISGLSQNGEGLKALELFEEMRQGLTKPDYVTFVNILSACSHMGLVERGKVYF 540
           DI+SWNAMISGLSQNG G +ALELFEEMRQ  TKPD VTFVN+LSACSHMGLV+ G +YF
Sbjct: 481 DIISWNAMISGLSQNGYGKEALELFEEMRQQDTKPDDVTFVNVLSACSHMGLVDSGWLYF 540

Query: 541 KMMLDEFGIVPRVEHYACMVDILSRAGKLLEAKEFIESATIDHGMYLWRILLGACRNYRN 600
           +MM DEFG++P+VEHYACMVD+LSRAGKL EAKEFIES TIDHG+ LWRILLGACRNYRN
Sbjct: 541 RMMFDEFGLLPKVEHYACMVDVLSRAGKLYEAKEFIESTTIDHGLCLWRILLGACRNYRN 600

Query: 601 YELGAYAGEKLMELGSEESSAYVLLSSIYASLGRSDDVERVRRAMKLRGVNKDPGCSWIE 660
           YELGAYAGEKLMELGS+ESSAYVLLS IY +LGR +DVERVR  MK+RGV+K+PGCSWIE
Sbjct: 601 YELGAYAGEKLMELGSQESSAYVLLSGIYTALGRPEDVERVRSMMKVRGVSKEPGCSWIE 660

Query: 661 LKSQVHVFVVGDQIHPEIVNIRVELRRLSKHMKDERSESPDDTDS 705
           LKS VHVFVVGDQ+HP I  IR E+ RLSK MKDE  +    TDS
Sbjct: 661 LKSNVHVFVVGDQMHPCIGEIRTEILRLSKQMKDEGYQPASVTDS 703

BLAST of CmoCh12G003340 vs. TrEMBL
Match: A0A067KKT6_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_08147 PE=4 SV=1)

HSP 1 Score: 1056.6 bits (2731), Expect = 1.3e-305
Identity = 518/703 (73.68%), Postives = 601/703 (85.49%), Query Frame = 1

Query: 5   LLPQHRALFNSLLRYTSHKDFQKGKAIHAHLLRTGSISSVYLSNSLVNLYAKCGSLVKAK 64
           L PQ R+LFNS+L  T  K  Q+G+A+H  ++++ S S +YL+NSLVN YAKCG+L KAK
Sbjct: 3   LPPQSRSLFNSILECTHQKSLQRGRALHGQIIKSASSSCIYLANSLVNFYAKCGNLPKAK 62

Query: 65  LVFDSITNKDVVSWNSLINAYSQQGPVGSSFVMELFQRMRAENTLPNAHTFAGVFTAASS 124
           LVF+ I +KDV+SWN LIN+YSQQGP G S VMELF+ MRAENT PNAHTFAGVFTAAS+
Sbjct: 63  LVFERIRDKDVISWNCLINSYSQQGPAGYSLVMELFKSMRAENTFPNAHTFAGVFTAASN 122

Query: 125 LFETLGGLQAHALSIKTSSFYDVFVGSSLLNMYCKIGCLLDARKVFDRMPERNSVSWATM 184
           L     G QA AL+I+T SFYDVFVGSSLLNMYCK G LL+ARKVFD MPERNSV+WATM
Sbjct: 123 LSSVFCGQQAQALAIRTVSFYDVFVGSSLLNMYCKAGLLLEARKVFDEMPERNSVTWATM 182

Query: 185 ISGYAMQRKAFEAWELFLLMCRGEGIHNEFIYTSVLSGLTVPELVDSGKQIHCLALKNGL 244
           ISGYA+QR A EA  +F LM R +   NEF++TS LS L +P+ +DSGKQIHCLA+KNGL
Sbjct: 183 ISGYAIQRLAGEALGIFELMRREDEGLNEFVFTSALSALAIPDFIDSGKQIHCLAVKNGL 242

Query: 245 LSIVSVGNALVTMYAKCGCLDDALKTFELSGDKNSITWSAMITGYAQAGNSHEALKLFSY 304
           L+ VSV NALVTMYAKCG LDD+L+ FE+S DK+SITWSAMITGYAQ+G+SH+ALKLFS 
Sbjct: 243 LAFVSVLNALVTMYAKCGGLDDSLQVFEMSSDKDSITWSAMITGYAQSGDSHKALKLFSR 302

Query: 305 MHFNGNKPSEFTFVGVINACSDLGALEEGKQMHGYSLKMGYESQIYIITALVDMYAKSGS 364
           MHF G  PSEFT VGV+NACSD+GA+EEGKQ+H Y +K+G+E Q+YI+TALVDMYAK G 
Sbjct: 303 MHFAGINPSEFTLVGVLNACSDIGAVEEGKQVHNYLVKLGFEFQMYIMTALVDMYAKCGC 362

Query: 365 LVDARKGFDYLKEPDIVLWTSMIGGYVQNGENETALTLYCRMQMEGIMPNELTMASVLRA 424
             DA KGF+YL+EPDI+LWTSMI GYVQNGENE AL+LYC+MQM+G++PNELTMASVL+A
Sbjct: 363 TADAWKGFNYLQEPDIILWTSMIAGYVQNGENEDALSLYCKMQMQGVLPNELTMASVLKA 422

Query: 425 CSSLAALEQGKQIHARTIKYGFNLEVPVGSALSTMYAKCGSLEDGNLVFRRMPTRDIVSW 484
           CSSLAAL+QG+QIHARTIKYG +L VP+GSALSTMYAKCGSLE+G LVFRRMP RD+VSW
Sbjct: 423 CSSLAALDQGRQIHARTIKYGLSLAVPIGSALSTMYAKCGSLEEGTLVFRRMPERDVVSW 482

Query: 485 NAMISGLSQNGEGLKALELFEEMRQGLTKPDYVTFVNILSACSHMGLVERGKVYFKMMLD 544
           NAMISG+SQNG G +ALELFEEMR+  TKPD VTFVN+LSACSHMGLVERG VYFKMMLD
Sbjct: 483 NAMISGVSQNGYGREALELFEEMRREGTKPDDVTFVNVLSACSHMGLVERGWVYFKMMLD 542

Query: 545 EFGIVPRVEHYACMVDILSRAGKLLEAKEFIESATIDHGMYLWRILLGACRNYRNYELGA 604
           EFGIVP VEHYACMVD+LSRAG L EAKEFIESA +DHG+ LWRILLGACRNY NYELGA
Sbjct: 543 EFGIVPGVEHYACMVDVLSRAGNLSEAKEFIESAKVDHGLCLWRILLGACRNYHNYELGA 602

Query: 605 YAGEKLMELGSEESSAYVLLSSIYASLGRSDDVERVRRAMKLRGVNKDPGCSWIELKSQV 664
           YAGEKLMELGS+ESSAYVLLSSIY +L R +DVER+R  M++RGV+K+PGCSWIELKS V
Sbjct: 603 YAGEKLMELGSQESSAYVLLSSIYTALNRPEDVERIRSMMRIRGVSKEPGCSWIELKSCV 662

Query: 665 HVFVVGDQIHPEIVNIRVELRRLSKHMKDERSESPDDTDSIRL 708
           HVFVVGDQ+HP+I  IR E+RRLSK MKD+      D+ SI L
Sbjct: 663 HVFVVGDQMHPQIGEIRAEIRRLSKQMKDKGCRPDSDSASITL 705

BLAST of CmoCh12G003340 vs. TrEMBL
Match: A0A061EFJ3_THECC (Tetratricopeptide repeat-like superfamily protein OS=Theobroma cacao GN=TCM_011013 PE=4 SV=1)

HSP 1 Score: 1053.5 bits (2723), Expect = 1.1e-304
Identity = 521/690 (75.51%), Postives = 598/690 (86.67%), Query Frame = 1

Query: 6   LPQHRALFNSLLRYTSHKDFQKGKAIHAHLLRTGSISS-VYLSNSLVNLYAKCGSLVKAK 65
           LP++R+ F+ L++ T  K+  +G+A+HA ++R+G  SS VYLSNSLVN YAKCG L KAK
Sbjct: 3   LPRYRSFFSELVQITKQKNLSRGRAVHARIIRSGGSSSCVYLSNSLVNFYAKCGDLSKAK 62

Query: 66  LVFDSITNKDVVSWNSLINAYSQQGPVGSSFVMELFQRMRAENTLPNAHTFAGVFTAASS 125
            VF++I +KDVVSWN LIN YSQQGP  S+FVM+LFQRMRAEN LPNAHTFAGVFTAAS+
Sbjct: 63  CVFENIQHKDVVSWNCLINGYSQQGPTASTFVMQLFQRMRAENYLPNAHTFAGVFTAASN 122

Query: 126 LFETLGGLQAHALSIKTSSFYDVFVGSSLLNMYCKIGCLLDARKVFDRMPERNSVSWATM 185
           L +   G QAH+L+IKT SF DVFVGSSLLN+YCK G L +ARKVFD MP++NSVSWATM
Sbjct: 123 LSDVFSGQQAHSLAIKTDSFDDVFVGSSLLNVYCKSGVLAEARKVFDEMPKKNSVSWATM 182

Query: 186 ISGYAMQRKAFEAWELFLLMCRGEGIHNEFIYTSVLSGLTVPELVDSGKQIHCLALKNGL 245
           ISGYAMQR A +A+ELF LM + E   NE+  +SVLS L  PE +++G+QIHC  +K+GL
Sbjct: 183 ISGYAMQRSALDAFELFELMRQEEEKVNEYAMSSVLSALADPEFLNTGRQIHCFTVKHGL 242

Query: 246 LSIVSVGNALVTMYAKCGCLDDALKTFELSGDKNSITWSAMITGYAQAGNSHEALKLFSY 305
           L   SVGNALVTMYAKCG LDDALKTFELSG+KNSITWSAMITGYAQ+G+S +ALKLFS 
Sbjct: 243 LVFSSVGNALVTMYAKCGSLDDALKTFELSGNKNSITWSAMITGYAQSGDSLKALKLFSS 302

Query: 306 MHFNGNKPSEFTFVGVINACSDLGALEEGKQMHGYSLKMGYESQIYIITALVDMYAKSGS 365
           MHF G  PSEFT VGV+NACSD GA+E+GKQ+HGY LK+GYESQ+YI+TALVDMYAK G 
Sbjct: 303 MHFAGIMPSEFTLVGVLNACSDTGAVEDGKQVHGYLLKLGYESQVYIMTALVDMYAKCGC 362

Query: 366 LVDARKGFDYLKEPDIVLWTSMIGGYVQNGENETALTLYCRMQMEGIMPNELTMASVLRA 425
            + ARKGFDYL+EPD+VLWTSMIGGYVQNGENE A+ LY RMQ+EGI+PNELTMAS+L+A
Sbjct: 363 TLAARKGFDYLQEPDMVLWTSMIGGYVQNGENENAMLLYGRMQIEGIVPNELTMASILKA 422

Query: 426 CSSLAALEQGKQIHARTIKYGFNLEVPVGSALSTMYAKCGSLEDGNLVFRRMPTRDIVSW 485
           CSSLAALEQGKQIHA TIK+GF LEVP+GSALSTMYAKCG+LEDGNLVFRRMP RD+VSW
Sbjct: 423 CSSLAALEQGKQIHACTIKHGFGLEVPIGSALSTMYAKCGNLEDGNLVFRRMPRRDVVSW 482

Query: 486 NAMISGLSQNGEGLKALELFEEMRQGLTKPDYVTFVNILSACSHMGLVERGKVYFKMMLD 545
           N+MISGL+QNG G +ALELFEEM    T+PDYVTFVNILSACSH+GLVERG  YF MM D
Sbjct: 483 NSMISGLAQNGHGNEALELFEEMLSEGTEPDYVTFVNILSACSHIGLVERGWAYFNMMSD 542

Query: 546 EFGIVPRVEHYACMVDILSRAGKLLEAKEFIESATIDHGMYLWRILLGACRNYRNYELGA 605
           +FGIVPRVEH+ACMVD+L RAGKL EAKEFIESATIDHGMYLWRILL ACRN+RNYELGA
Sbjct: 543 KFGIVPRVEHHACMVDMLGRAGKLDEAKEFIESATIDHGMYLWRILLSACRNFRNYELGA 602

Query: 606 YAGEKLMELGSEESSAYVLLSSIYASLGRSDDVERVRRAMKLRGVNKDPGCSWIELKSQV 665
           YAGEKLMELGS+ESSAYVLLSSIYA+LGR +DVERVRR M+LRGVNK+PGCSWIELK  V
Sbjct: 603 YAGEKLMELGSQESSAYVLLSSIYAALGRLEDVERVRRMMRLRGVNKEPGCSWIELKGGV 662

Query: 666 HVFVVGDQIHPEIVNIRVELRRLSKHMKDE 695
           HVFVVGDQ+HPEI  IR E++ LSK MKDE
Sbjct: 663 HVFVVGDQMHPEIKTIREEVQMLSKQMKDE 692

BLAST of CmoCh12G003340 vs. TAIR10
Match: AT2G33680.1 (AT2G33680.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 828.6 bits (2139), Expect = 3.0e-240
Identity = 413/693 (59.60%), Postives = 519/693 (74.89%), Query Frame = 1

Query: 5   LLPQHRALFNSLLRYTSHKDFQKGKAIHAHLLRTGSISSVYLSNSLVNLYAKCGSLVKAK 64
           L P    L   L  ++  ++   G+A+H  ++RTG+ + +  +N LVN YAKCG L KA 
Sbjct: 10  LNPHTSTLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAH 69

Query: 65  LVFDSITNKDVVSWNSLINAYSQQGPVGSSF-VMELFQRMRAENTLPNAHTFAGVFTAAS 124
            +F++I  KDVVSWNSLI  YSQ G + SS+ VM+LF+ MRA++ LPNA+T AG+F A S
Sbjct: 70  SIFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAES 129

Query: 125 SLFETLGGLQAHALSIKTSSFYDVFVGSSLLNMYCKIGCLLDARKVFDRMPERNSVSWAT 184
           SL  +  G QAHAL +K SSF D++V +SL+ MYCK G + D  KVF  MPERN+ +W+T
Sbjct: 130 SLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWST 189

Query: 185 MISGYAMQRKAFEAWELFLLMCRG--EGIHNEFIYTSVLSGLTVPELVDSGKQIHCLALK 244
           M+SGYA + +  EA ++F L  R   EG  +++++T+VLS L     V  G+QIHC+ +K
Sbjct: 190 MVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAATIYVGLGRQIHCITIK 249

Query: 245 NGLLSIVSVGNALVTMYAKCGCLDDALKTFELSGDKNSITWSAMITGYAQAGNSHEALKL 304
           NGLL  V++ NALVTMY+KC  L++A K F+ SGD+NSITWSAM+TGY+Q G S EA+KL
Sbjct: 250 NGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKL 309

Query: 305 FSYMHFNGNKPSEFTFVGVINACSDLGALEEGKQMHGYSLKMGYESQIYIITALVDMYAK 364
           FS M   G KPSE+T VGV+NACSD+  LEEGKQ+H + LK+G+E  ++  TALVDMYAK
Sbjct: 310 FSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAK 369

Query: 365 SGSLVDARKGFDYLKEPDIVLWTSMIGGYVQNGENETALTLYCRMQMEGIMPNELTMASV 424
           +G L DARKGFD L+E D+ LWTS+I GYVQN +NE AL LY RM+  GI+PN+ TMASV
Sbjct: 370 AGCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASV 429

Query: 425 LRACSSLAALEQGKQIHARTIKYGFNLEVPVGSALSTMYAKCGSLEDGNLVFRRMPTRDI 484
           L+ACSSLA LE GKQ+H  TIK+GF LEVP+GSALSTMY+KCGSLEDGNLVFRR P +D+
Sbjct: 430 LKACSSLATLELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKDV 489

Query: 485 VSWNAMISGLSQNGEGLKALELFEEMRQGLTKPDYVTFVNILSACSHMGLVERGKVYFKM 544
           VSWNAMISGLS NG+G +ALELFEEM     +PD VTFVNI+SACSH G VERG  YF M
Sbjct: 490 VSWNAMISGLSHNGQGDEALELFEEMLAEGMEPDDVTFVNIISACSHKGFVERGWFYFNM 549

Query: 545 MLDEFGIVPRVEHYACMVDILSRAGKLLEAKEFIESATIDHGMYLWRILLGACRNYRNYE 604
           M D+ G+ P+V+HYACMVD+LSRAG+L EAKEFIESA IDHG+ LWRILL AC+N+   E
Sbjct: 550 MSDQIGLDPKVDHYACMVDLLSRAGQLKEAKEFIESANIDHGLCLWRILLSACKNHGKCE 609

Query: 605 LGAYAGEKLMELGSEESSAYVLLSSIYASLGRSDDVERVRRAMKLRGVNKDPGCSWIELK 664
           LG YAGEKLM LGS ESS YV LS IY +LGR  DVERV + M+  GV+K+ GCSWIELK
Sbjct: 610 LGVYAGEKLMALGSRESSTYVQLSGIYTALGRMRDVERVWKHMRANGVSKEVGCSWIELK 669

Query: 665 SQVHVFVVGDQIHPEIVNIRVELRRLSKHMKDE 695
           +Q HVFVVGD +HP I   +  +  +S+ M +E
Sbjct: 670 NQYHVFVVGDTMHPMIEETKDLVCLVSRQMIEE 702

BLAST of CmoCh12G003340 vs. TAIR10
Match: AT3G09040.1 (AT3G09040.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 483.4 bits (1243), Expect = 2.4e-136
Identity = 262/676 (38.76%), Postives = 399/676 (59.02%), Query Frame = 1

Query: 28   GKAIHAHLLRTGSISSVYLSNSLVNLYAKCGSLVKAKLVFDSITNKDVVSWNSLINAYSQ 87
            G  +HA  ++ G  S++Y+ +SLV++Y+KC  +  A  VF+++  K+ V WN++I  Y+ 
Sbjct: 346  GLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAH 405

Query: 88   QGPVGSSFVMELFQRMRAENTLPNAHTFAGVFTAASSLFETLGGLQAHALSIKTSSFYDV 147
             G   S  VMELF  M++     +  TF  + +  ++  +   G Q H++ IK     ++
Sbjct: 406  NGE--SHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNL 465

Query: 148  FVGSSLLNMYCKIGCLLDARKVFDRMPERNSVSWATMISGYAMQRKAFEAWELFLLMCRG 207
            FVG++L++MY K G L DAR++F+RM +R++V+W T+I  Y       EA++LF  M   
Sbjct: 466  FVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLC 525

Query: 208  EGIHNEFIYTSVLSGLTVPELVDSGKQIHCLALKNGLLSIVSVGNALVTMYAKCGCLDDA 267
              + +     S L   T    +  GKQ+HCL++K GL   +  G++L+ MY+KCG + DA
Sbjct: 526  GIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDA 585

Query: 268  LKTFELSGDKNSITWSAMITGYAQAGNSHEALKLFSYMHFNGNKPSEFTFVGVINACSDL 327
             K F    + + ++ +A+I GY+Q  N  EA+ LF  M   G  PSE TF  ++ AC   
Sbjct: 586  RKVFSSLPEWSVVSMNALIAGYSQ-NNLEEAVVLFQEMLTRGVNPSEITFATIVEACHKP 645

Query: 328  GALEEGKQMHGYSLKMGYESQ-IYIITALVDMYAKSGSLVDARKGFDYLKEP-DIVLWTS 387
             +L  G Q HG   K G+ S+  Y+  +L+ MY  S  + +A   F  L  P  IVLWT 
Sbjct: 646  ESLTLGTQFHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEACALFSELSSPKSIVLWTG 705

Query: 388  MIGGYVQNGENETALTLYCRMQMEGIMPNELTMASVLRACSSLAALEQGKQIHARTIKYG 447
            M+ G+ QNG  E AL  Y  M+ +G++P++ T  +VLR CS L++L +G+ IH+      
Sbjct: 706  MMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLA 765

Query: 448  FNLEVPVGSALSTMYAKCGSLEDGNLVFRRMPTR-DIVSWNAMISGLSQNGEGLKALELF 507
             +L+    + L  MYAKCG ++  + VF  M  R ++VSWN++I+G ++NG    AL++F
Sbjct: 766  HDLDELTSNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLINGYAKNGYAEDALKIF 825

Query: 508  EEMRQGLTKPDYVTFVNILSACSHMGLVERGKVYFKMMLDEFGIVPRVEHYACMVDILSR 567
            + MRQ    PD +TF+ +L+ACSH G V  G+  F+MM+ ++GI  RV+H ACMVD+L R
Sbjct: 826  DSMRQSHIMPDEITFLGVLTACSHAGKVSDGRKIFEMMIGQYGIEARVDHVACMVDLLGR 885

Query: 568  AGKLLEAKEFIESATIDHGMYLWRILLGACRNYRNYELGAYAGEKLMELGSEESSAYVLL 627
             G L EA +FIE+  +     LW  LLGACR + +   G  + EKL+EL  + SSAYVLL
Sbjct: 886  WGYLQEADDFIEAQNLKPDARLWSSLLGACRIHGDDIRGEISAEKLIELEPQNSSAYVLL 945

Query: 628  SSIYASLGRSDDVERVRRAMKLRGVNKDPGCSWIELKSQVHVFVVGDQIHPEIVNIRVEL 687
            S+IYAS G  +    +R+ M+ RGV K PG SWI+++ + H+F  GD+ H EI  I + L
Sbjct: 946  SNIYASQGCWEKANALRKVMRDRGVKKVPGYSWIDVEQRTHIFAAGDKSHSEIGKIEMFL 1005

Query: 688  RRLSKHMKDERSESPD 701
              L   MKD+   +PD
Sbjct: 1006 EDLYDLMKDDAVVNPD 1018

BLAST of CmoCh12G003340 vs. TAIR10
Match: AT2G27610.1 (AT2G27610.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 461.8 bits (1187), Expect = 7.4e-130
Identity = 255/686 (37.17%), Postives = 401/686 (58.45%), Query Frame = 1

Query: 11  ALFNSLLRYTSHK-DFQKGKAIHAHLLRTGSISSVYLSNSLVNLYAKCGSLVKAKLVFDS 70
           ++F+S+L+ ++   D   G+ +H   ++ G +  V +  SLV+ Y K  +    + VFD 
Sbjct: 94  SIFSSVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDE 153

Query: 71  ITNKDVVSWNSLINAYSQQGPVGSSFVMELFQRMRAENTLPNAHTFAGVFTAASSLFETL 130
           +  ++VV+W +LI+ Y++     +  V+ LF RM+ E T PN+ TFA      +      
Sbjct: 154 MKERNVVTWTTLISGYARNSM--NDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGG 213

Query: 131 GGLQAHALSIKTSSFYDVFVGSSLLNMYCKIGCLLDARKVFDRMPERNSVSWATMISGYA 190
            GLQ H + +K      + V +SL+N+Y K G +  AR +FD+   ++ V+W +MISGYA
Sbjct: 214 RGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYA 273

Query: 191 MQRKAFEAWELFLLMCRGEGIHNEFIYTSVLSGLTVPELVDSGKQIHCLALKNGLLSIVS 250
                 EA  +F  M       +E  + SV+      + +   +Q+HC  +K G L   +
Sbjct: 274 ANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQN 333

Query: 251 VGNALVTMYAKCGCLDDALKTF-ELSGDKNSITWSAMITGYAQAGNSHEALKLFSYMHFN 310
           +  AL+  Y+KC  + DAL+ F E+    N ++W+AMI+G+ Q     EA+ LFS M   
Sbjct: 334 IRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRK 393

Query: 311 GNKPSEFTFVGVINACSDLGALEEGKQMHGYSLKMGYESQIYIITALVDMYAKSGSLVDA 370
           G +P+EFT+  ++ A   +   E    +H   +K  YE    + TAL+D Y K G + +A
Sbjct: 394 GVRPNEFTYSVILTALPVISPSE----VHAQVVKTNYERSSTVGTALLDAYVKLGKVEEA 453

Query: 371 RKGFDYLKEPDIVLWTSMIGGYVQNGENETALTLYCRMQMEGIMPNELTMASVLRACSSL 430
            K F  + + DIV W++M+ GY Q GE E A+ ++  +   GI PNE T +S+L  C++ 
Sbjct: 454 AKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAAT 513

Query: 431 -AALEQGKQIHARTIKYGFNLEVPVGSALSTMYAKCGSLEDGNLVFRRMPTRDIVSWNAM 490
            A++ QGKQ H   IK   +  + V SAL TMYAK G++E    VF+R   +D+VSWN+M
Sbjct: 514 NASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSM 573

Query: 491 ISGLSQNGEGLKALELFEEMRQGLTKPDYVTFVNILSACSHMGLVERGKVYFKMMLDEFG 550
           ISG +Q+G+ +KAL++F+EM++   K D VTF+ + +AC+H GLVE G+ YF +M+ +  
Sbjct: 574 ISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCK 633

Query: 551 IVPRVEHYACMVDILSRAGKLLEAKEFIESATIDHGMYLWRILLGACRNYRNYELGAYAG 610
           I P  EH +CMVD+ SRAG+L +A + IE+     G  +WR +L ACR ++  ELG  A 
Sbjct: 634 IAPTKEHNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTILAACRVHKKTELGRLAA 693

Query: 611 EKLMELGSEESSAYVLLSSIYASLGRSDDVERVRRAMKLRGVNKDPGCSWIELKSQVHVF 670
           EK++ +  E+S+AYVLLS++YA  G   +  +VR+ M  R V K+PG SWIE+K++ + F
Sbjct: 694 EKIIAMKPEDSAAYVLLSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWIEVKNKTYSF 753

Query: 671 VVGDQIHPEIVNIRVELRRLSKHMKD 694
           + GD+ HP    I ++L  LS  +KD
Sbjct: 754 LAGDRSHPLKDQIYMKLEDLSTRLKD 773

BLAST of CmoCh12G003340 vs. TAIR10
Match: AT4G39530.1 (AT4G39530.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 456.1 bits (1172), Expect = 4.1e-128
Identity = 242/648 (37.35%), Postives = 378/648 (58.33%), Query Frame = 1

Query: 31  IHAHLLRTGSISSVYLSNSLVNLYAKCGSLVKAKLVFDSITNKDVVSWNSLINAYSQQGP 90
           + + L+++G    VY+   L++ Y K G++  A+LVFD++  K  V+W ++I+   +   
Sbjct: 170 LQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVK--- 229

Query: 91  VGSSFV-MELFQRMRAENTLPNAHTFAGVFTAASSLFETLGGLQAHALSIKTSSFYDVFV 150
           +G S+V ++LF ++  +N +P+ +  + V +A S L    GG Q HA  ++     D  +
Sbjct: 230 MGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASL 289

Query: 151 GSSLLNMYCKIGCLLDARKVFDRMPERNSVSWATMISGYAMQRKAFEAWELFLLMCRGEG 210
            + L++ Y K G ++ A K+F+ MP +N +SW T++SGY       EA ELF  M +   
Sbjct: 290 MNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGL 349

Query: 211 IHNEFIYTSVLSGLTVPELVDSGKQIHCLALKNGLLSIVSVGNALVTMYAKCGCLDDALK 270
             + +  +S+L+       +  G Q+H   +K  L +   V N+L+ MYAKC CL DA K
Sbjct: 350 KPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARK 409

Query: 271 TFELSGDKNSITWSAMITGYAQAGNS---HEALKLFSYMHFNGNKPSEFTFVGVINACSD 330
            F++    + + ++AMI GY++ G     HEAL +F  M F   +PS  TFV ++ A + 
Sbjct: 410 VFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASAS 469

Query: 331 LGALEEGKQMHGYSLKMGYESQIYIITALVDMYAKSGSLVDARKGFDYLKEPDIVLWTSM 390
           L +L   KQ+HG   K G    I+  +AL+D+Y+    L D+R  FD +K  D+V+W SM
Sbjct: 470 LTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSM 529

Query: 391 IGGYVQNGENETALTLYCRMQMEGIMPNELTMASVLRACSSLAALEQGKQIHARTIKYGF 450
             GYVQ  ENE AL L+  +Q+    P+E T A+++ A  +LA+++ G++ H + +K G 
Sbjct: 530 FAGYVQQSENEEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGL 589

Query: 451 NLEVPVGSALSTMYAKCGSLEDGNLVFRRMPTRDIVSWNAMISGLSQNGEGLKALELFEE 510
                + +AL  MYAKCGS ED +  F    +RD+V WN++IS  + +GEG KAL++ E+
Sbjct: 590 ECNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGKKALQMLEK 649

Query: 511 MRQGLTKPDYVTFVNILSACSHMGLVERGKVYFKMMLDEFGIVPRVEHYACMVDILSRAG 570
           M     +P+Y+TFV +LSACSH GLVE G   F++ML  FGI P  EHY CMV +L RAG
Sbjct: 650 MMSEGIEPNYITFVGVLSACSHAGLVEDGLKQFELML-RFGIEPETEHYVCMVSLLGRAG 709

Query: 571 KLLEAKEFIESATIDHGMYLWRILLGACRNYRNYELGAYAGEKLMELGSEESSAYVLLSS 630
           +L +A+E IE         +WR LL  C    N EL  +A E  +    ++S ++ +LS+
Sbjct: 710 RLNKARELIEKMPTKPAAIVWRSLLSGCAKAGNVELAEHAAEMAILSDPKDSGSFTMLSN 769

Query: 631 IYASLGRSDDVERVRRAMKLRGVNKDPGCSWIELKSQVHVFVVGDQIH 675
           IYAS G   + ++VR  MK+ GV K+PG SWI +  +VH+F+  D+ H
Sbjct: 770 IYASKGMWTEAKKVRERMKVEGVVKEPGRSWIGINKEVHIFLSKDKSH 813

BLAST of CmoCh12G003340 vs. TAIR10
Match: AT4G13650.1 (AT4G13650.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 453.4 bits (1165), Expect = 2.6e-127
Identity = 247/691 (35.75%), Postives = 386/691 (55.86%), Query Frame = 1

Query: 3   LHLLPQHRALFNSLLRYTSHKDFQKGKAIHAHLLRTGSISSVYLSNSLVNLYAKCGSLVK 62
           L ++P   A  + L      +  + G+ +H  +L+ G  S  Y+ N+LV+LY   G+L+ 
Sbjct: 282 LGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLIS 341

Query: 63  AKLVFDSITNKDVVSWNSLINAYSQQGPVGSSFVMELFQRMRAENTLPNAHTFAGVFTAA 122
           A+ +F +++ +D V++N+LIN  SQ G       MELF+RM  +   P+++T A +  A 
Sbjct: 342 AEHIFSNMSQRDAVTYNTLINGLSQCGY--GEKAMELFKRMHLDGLEPDSNTLASLVVAC 401

Query: 123 SSLFETLGGLQAHALSIKTSSFYDVFVGSSLLNMYCKIGCLLDARKVFDRMPERNSVSWA 182
           S+      G Q HA + K     +  +  +LLN+Y K   +  A   F      N V W 
Sbjct: 402 SADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWN 461

Query: 183 TMISGYAMQRKAFEAWELFLLMCRGEGIHNEFIYTSVLSGLTVPELVDSGKQIHCLALKN 242
            M+  Y +      ++ +F  M   E + N++ Y S+L        ++ G+QIH   +K 
Sbjct: 462 VMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKT 521

Query: 243 GLLSIVSVGNALVTMYAKCGCLDDALKTFELSGDKNSITWSAMITGYAQAGNSHEALKLF 302
                  V + L+ MYAK G LD A         K+ ++W+ MI GY Q     +AL  F
Sbjct: 522 NFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTF 581

Query: 303 SYMHFNGNKPSEFTFVGVINACSDLGALEEGKQMHGYSLKMGYESQIYIITALVDMYAKS 362
             M   G +  E      ++AC+ L AL+EG+Q+H  +   G+ S +    ALV +Y++ 
Sbjct: 582 RQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRC 641

Query: 363 GSLVDARKGFDYLKEPDIVLWTSMIGGYVQNGENETALTLYCRMQMEGIMPNELTMASVL 422
           G + ++   F+  +  D + W +++ G+ Q+G NE AL ++ RM  EGI  N  T  S +
Sbjct: 642 GKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAV 701

Query: 423 RACSSLAALEQGKQIHARTIKYGFNLEVPVGSALSTMYAKCGSLEDGNLVFRRMPTRDIV 482
           +A S  A ++QGKQ+HA   K G++ E  V +AL +MYAKCGS+ D    F  + T++ V
Sbjct: 702 KAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEV 761

Query: 483 SWNAMISGLSQNGEGLKALELFEEMRQGLTKPDYVTFVNILSACSHMGLVERGKVYFKMM 542
           SWNA+I+  S++G G +AL+ F++M     +P++VT V +LSACSH+GLV++G  YF+ M
Sbjct: 762 SWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESM 821

Query: 543 LDEFGIVPRVEHYACMVDILSRAGKLLEAKEFIESATIDHGMYLWRILLGACRNYRNYEL 602
             E+G+ P+ EHY C+VD+L+RAG L  AKEFI+   I     +WR LL AC  ++N E+
Sbjct: 822 NSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHKNMEI 881

Query: 603 GAYAGEKLMELGSEESSAYVLLSSIYASLGRSDDVERVRRAMKLRGVNKDPGCSWIELKS 662
           G +A   L+EL  E+S+ YVLLS++YA   + D  +  R+ MK +GV K+PG SWIE+K+
Sbjct: 882 GEFAAHHLLELEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEKGVKKEPGQSWIEVKN 941

Query: 663 QVHVFVVGDQIHPEIVNIRVELRRLSKHMKD 694
            +H F VGDQ HP    I    + L+K   +
Sbjct: 942 SIHSFYVGDQNHPLADEIHEYFQDLTKRASE 970

BLAST of CmoCh12G003340 vs. NCBI nr
Match: gi|659089060|ref|XP_008445307.1| (PREDICTED: pentatricopeptide repeat-containing protein At2g33680 [Cucumis melo])

HSP 1 Score: 1231.1 bits (3184), Expect = 0.0e+00
Identity = 613/708 (86.58%), Postives = 653/708 (92.23%), Query Frame = 1

Query: 1   MSLHLLP-QHRALFNSLLRYTSHKDFQKGKAIHAHLLRTGSISSVYLSNSLVNLYAKCGS 60
           MSL+LLP QHR+ F+ LLRYT  KD QKGKAIHA LLRTGS  SVYL+NSLVNLYAKCGS
Sbjct: 1   MSLYLLPPQHRSFFDLLLRYTRQKDLQKGKAIHAQLLRTGSCCSVYLTNSLVNLYAKCGS 60

Query: 61  LVKAKLVFDSITNKDVVSWNSLINAYSQQGPVGSSFVMELFQRMRAENTLPNAHTFAGVF 120
           L+KAKLVF+SI+NKDVVSWN LIN YSQ+G VGSSFVMELFQRMRAENTLPNAHTF+GVF
Sbjct: 61  LLKAKLVFESISNKDVVSWNCLINGYSQKGTVGSSFVMELFQRMRAENTLPNAHTFSGVF 120

Query: 121 TAASSLFETLGGLQAHALSIKTSSFYDVFVGSSLLNMYCKIGCLLDARKVFDRMPERNSV 180
           TAASS  ET GGLQAHAL+IKTS+FYDVFVGSSL+NMYCKIGCLLDARKVFD +PERN V
Sbjct: 121 TAASSSPETFGGLQAHALAIKTSNFYDVFVGSSLINMYCKIGCLLDARKVFDTIPERNIV 180

Query: 181 SWATMISGYAMQRKAFEAWELFLLMCRGEGIHNEFIYTSVLSGLTVPELVDSGKQIHCLA 240
           SWATMISGYAM+R A EAWELFLLM R EG H++FIYT VLS LTVP+LV  GKQIHCLA
Sbjct: 181 SWATMISGYAMERMALEAWELFLLMRREEGAHDKFIYTGVLSALTVPDLVRYGKQIHCLA 240

Query: 241 LKNGLLSIVSVGNALVTMYAKCGCLDDALKTFELSGDKNSITWSAMITGYAQAGNSHEAL 300
           LKNGLLSI SVGNALVTMY KCGCLDDALKTFELSGDK+ ITWSAMITGYAQAG+S EAL
Sbjct: 241 LKNGLLSIASVGNALVTMYGKCGCLDDALKTFELSGDKDDITWSAMITGYAQAGDSDEAL 300

Query: 301 KLFSYMHFNGNKPSEFTFVGVINACSDLGALEEGKQMHGYSLKMGYESQIYIITALVDMY 360
           KLF  MH NGNKPSEFTFVGVINACSD+GALEEGKQ+HGYSLK GYE QIY +TALVDMY
Sbjct: 301 KLFYNMHLNGNKPSEFTFVGVINACSDIGALEEGKQIHGYSLKAGYERQIYFMTALVDMY 360

Query: 361 AKSGSLVDARKGFDYLKEPDIVLWTSMIGGYVQNGENETALTLYCRMQMEGIMPNELTMA 420
           AK GSLVDARKGFDYLKEPDIVLWTSMI GY QNGENETALTLYCRMQMEGI+P+ELTMA
Sbjct: 361 AKCGSLVDARKGFDYLKEPDIVLWTSMISGYAQNGENETALTLYCRMQMEGILPHELTMA 420

Query: 421 SVLRACSSLAALEQGKQIHARTIKYGFNLEVPVGSALSTMYAKCGSLEDGNLVFRRMPTR 480
           SVLRACSSLAALEQGKQIHA+TIKYGF+LEVP+GSALSTMYAKCGS+EDGNLVFRRMPTR
Sbjct: 421 SVLRACSSLAALEQGKQIHAQTIKYGFSLEVPIGSALSTMYAKCGSVEDGNLVFRRMPTR 480

Query: 481 DIVSWNAMISGLSQNGEGLKALELFEEMRQGLTKPDYVTFVNILSACSHMGLVERGKVYF 540
           DI++WNAMISGLSQNGEGLKALELFEEMR G TKPDYVTFVN+LSACSHMGLVERGKVYF
Sbjct: 481 DIMTWNAMISGLSQNGEGLKALELFEEMRHGTTKPDYVTFVNVLSACSHMGLVERGKVYF 540

Query: 541 KMMLDEFGIVPRVEHYACMVDILSRAGKLLEAKEFIESATIDHGMYLWRILLGACRNYRN 600
           +MMLD+FGIVPRVEHYACMVDILSRAGKL E KEFIESATIDHGM LWRILLGACRNYRN
Sbjct: 541 RMMLDDFGIVPRVEHYACMVDILSRAGKLHETKEFIESATIDHGMCLWRILLGACRNYRN 600

Query: 601 YELGAYAGEKLMELGSEESSAYVLLSSIYASLGRSDDVERVRRAMKLRGVNKDPGCSWIE 660
           YELGAYAGEKLMELGS+ESSAY+LLSSIY +LGRSDDVERVRR MKLRGVNK+PGCSWIE
Sbjct: 601 YELGAYAGEKLMELGSQESSAYILLSSIYTALGRSDDVERVRRLMKLRGVNKEPGCSWIE 660

Query: 661 LKSQVHVFVVGDQIHPEIVNIRVELRRLSKHMKDERSESPDDTDSIRL 708
           LKSQVHVFVVGDQIHP+I  IR ELRRL  HMKDE  ES DDT+S+ L
Sbjct: 661 LKSQVHVFVVGDQIHPQIFKIRSELRRLRDHMKDECYESFDDTNSMTL 708

BLAST of CmoCh12G003340 vs. NCBI nr
Match: gi|778670421|ref|XP_004142988.2| (PREDICTED: pentatricopeptide repeat-containing protein At2g33680 [Cucumis sativus])

HSP 1 Score: 1221.5 bits (3159), Expect = 0.0e+00
Identity = 607/708 (85.73%), Postives = 651/708 (91.95%), Query Frame = 1

Query: 1   MSLHLLP-QHRALFNSLLRYTSHKDFQKGKAIHAHLLRTGSISSVYLSNSLVNLYAKCGS 60
           M+L+LLP QHR+  + LLR T  KD QKGKAIHA LLRTGS SSVYL+NSLVNLYAKCGS
Sbjct: 1   MNLYLLPPQHRSFVDLLLRCTRQKDLQKGKAIHAQLLRTGSFSSVYLTNSLVNLYAKCGS 60

Query: 61  LVKAKLVFDSITNKDVVSWNSLINAYSQQGPVGSSFVMELFQRMRAENTLPNAHTFAGVF 120
           +VKAKLVF+SITNKDVVSWN LIN YSQ+G VG SFVMELFQRMRAENTLPN HTF+GVF
Sbjct: 61  IVKAKLVFESITNKDVVSWNCLINGYSQKGTVGYSFVMELFQRMRAENTLPNGHTFSGVF 120

Query: 121 TAASSLFETLGGLQAHALSIKTSSFYDVFVGSSLLNMYCKIGCLLDARKVFDRMPERNSV 180
           TAASS  ET GGLQAHAL+IKTS+FYDVFVGSSL+NMYCKIGC+LDARKVFD +PERN+V
Sbjct: 121 TAASSSPETFGGLQAHALAIKTSNFYDVFVGSSLINMYCKIGCMLDARKVFDTIPERNTV 180

Query: 181 SWATMISGYAMQRKAFEAWELFLLMCRGEGIHNEFIYTSVLSGLTVPELVDSGKQIHCLA 240
           SWAT+ISGYAM+R AFEAWELFLLM R EG H++FIYTSVLS LTVP+LV  GKQIHCLA
Sbjct: 181 SWATIISGYAMERMAFEAWELFLLMRREEGAHDKFIYTSVLSALTVPDLVHYGKQIHCLA 240

Query: 241 LKNGLLSIVSVGNALVTMYAKCGCLDDALKTFELSGDKNSITWSAMITGYAQAGNSHEAL 300
           LKNGLLSI SVGNALVTMY KCGCLDDA KTFELSGDK+ ITWSAMITGYAQAG+SHEAL
Sbjct: 241 LKNGLLSIASVGNALVTMYGKCGCLDDAFKTFELSGDKDDITWSAMITGYAQAGDSHEAL 300

Query: 301 KLFSYMHFNGNKPSEFTFVGVINACSDLGALEEGKQMHGYSLKMGYESQIYIITALVDMY 360
            LF  MH NGNKPSEFTFVGVINACSD+GALEEGKQ+HGYSLK GYE QIY +TALVDMY
Sbjct: 301 NLFYNMHLNGNKPSEFTFVGVINACSDIGALEEGKQIHGYSLKAGYECQIYFMTALVDMY 360

Query: 361 AKSGSLVDARKGFDYLKEPDIVLWTSMIGGYVQNGENETALTLYCRMQMEGIMPNELTMA 420
           AK GSLVDARKGFDYLKEPDIVLWTSMI GY QNGENETALTLYCRMQME IMP+ELTMA
Sbjct: 361 AKCGSLVDARKGFDYLKEPDIVLWTSMISGYAQNGENETALTLYCRMQMERIMPHELTMA 420

Query: 421 SVLRACSSLAALEQGKQIHARTIKYGFNLEVPVGSALSTMYAKCGSLEDGNLVFRRMPTR 480
           SVLRACSSLAALEQGKQIHA+TIKYGF+LEVP+GSALSTMYAKCGSLEDGNLVFRRMP+R
Sbjct: 421 SVLRACSSLAALEQGKQIHAQTIKYGFSLEVPIGSALSTMYAKCGSLEDGNLVFRRMPSR 480

Query: 481 DIVSWNAMISGLSQNGEGLKALELFEEMRQGLTKPDYVTFVNILSACSHMGLVERGKVYF 540
           DI++WNAMISGLSQNGEGLKALELFEE+R G TKPDYVTFVN+LSACSHMGLVERGKVYF
Sbjct: 481 DIMTWNAMISGLSQNGEGLKALELFEELRHGTTKPDYVTFVNVLSACSHMGLVERGKVYF 540

Query: 541 KMMLDEFGIVPRVEHYACMVDILSRAGKLLEAKEFIESATIDHGMYLWRILLGACRNYRN 600
           +MMLDEFGI+PRVEHYACMVDILSRAGKL E KEFIESATIDHGM LWRILLGACRNYRN
Sbjct: 541 RMMLDEFGIIPRVEHYACMVDILSRAGKLHETKEFIESATIDHGMCLWRILLGACRNYRN 600

Query: 601 YELGAYAGEKLMELGSEESSAYVLLSSIYASLGRSDDVERVRRAMKLRGVNKDPGCSWIE 660
           YELGAYAGEKLMELGS+ESSAY+LLSSIY +LGRSDDVERVRR MKLRGVNK+PGCSWIE
Sbjct: 601 YELGAYAGEKLMELGSQESSAYILLSSIYTALGRSDDVERVRRLMKLRGVNKEPGCSWIE 660

Query: 661 LKSQVHVFVVGDQIHPEIVNIRVELRRLSKHMKDERSESPDDTDSIRL 708
           LKSQVHVFVVGDQIHP+IV I  ELRRL  HMKDE  ES +DT+S+ L
Sbjct: 661 LKSQVHVFVVGDQIHPQIVKICSELRRLRDHMKDECYESFNDTNSMTL 708

BLAST of CmoCh12G003340 vs. NCBI nr
Match: gi|700207161|gb|KGN62280.1| (hypothetical protein Csa_2G348180 [Cucumis sativus])

HSP 1 Score: 1221.5 bits (3159), Expect = 0.0e+00
Identity = 607/708 (85.73%), Postives = 651/708 (91.95%), Query Frame = 1

Query: 1   MSLHLLP-QHRALFNSLLRYTSHKDFQKGKAIHAHLLRTGSISSVYLSNSLVNLYAKCGS 60
           M+L+LLP QHR+  + LLR T  KD QKGKAIHA LLRTGS SSVYL+NSLVNLYAKCGS
Sbjct: 86  MNLYLLPPQHRSFVDLLLRCTRQKDLQKGKAIHAQLLRTGSFSSVYLTNSLVNLYAKCGS 145

Query: 61  LVKAKLVFDSITNKDVVSWNSLINAYSQQGPVGSSFVMELFQRMRAENTLPNAHTFAGVF 120
           +VKAKLVF+SITNKDVVSWN LIN YSQ+G VG SFVMELFQRMRAENTLPN HTF+GVF
Sbjct: 146 IVKAKLVFESITNKDVVSWNCLINGYSQKGTVGYSFVMELFQRMRAENTLPNGHTFSGVF 205

Query: 121 TAASSLFETLGGLQAHALSIKTSSFYDVFVGSSLLNMYCKIGCLLDARKVFDRMPERNSV 180
           TAASS  ET GGLQAHAL+IKTS+FYDVFVGSSL+NMYCKIGC+LDARKVFD +PERN+V
Sbjct: 206 TAASSSPETFGGLQAHALAIKTSNFYDVFVGSSLINMYCKIGCMLDARKVFDTIPERNTV 265

Query: 181 SWATMISGYAMQRKAFEAWELFLLMCRGEGIHNEFIYTSVLSGLTVPELVDSGKQIHCLA 240
           SWAT+ISGYAM+R AFEAWELFLLM R EG H++FIYTSVLS LTVP+LV  GKQIHCLA
Sbjct: 266 SWATIISGYAMERMAFEAWELFLLMRREEGAHDKFIYTSVLSALTVPDLVHYGKQIHCLA 325

Query: 241 LKNGLLSIVSVGNALVTMYAKCGCLDDALKTFELSGDKNSITWSAMITGYAQAGNSHEAL 300
           LKNGLLSI SVGNALVTMY KCGCLDDA KTFELSGDK+ ITWSAMITGYAQAG+SHEAL
Sbjct: 326 LKNGLLSIASVGNALVTMYGKCGCLDDAFKTFELSGDKDDITWSAMITGYAQAGDSHEAL 385

Query: 301 KLFSYMHFNGNKPSEFTFVGVINACSDLGALEEGKQMHGYSLKMGYESQIYIITALVDMY 360
            LF  MH NGNKPSEFTFVGVINACSD+GALEEGKQ+HGYSLK GYE QIY +TALVDMY
Sbjct: 386 NLFYNMHLNGNKPSEFTFVGVINACSDIGALEEGKQIHGYSLKAGYECQIYFMTALVDMY 445

Query: 361 AKSGSLVDARKGFDYLKEPDIVLWTSMIGGYVQNGENETALTLYCRMQMEGIMPNELTMA 420
           AK GSLVDARKGFDYLKEPDIVLWTSMI GY QNGENETALTLYCRMQME IMP+ELTMA
Sbjct: 446 AKCGSLVDARKGFDYLKEPDIVLWTSMISGYAQNGENETALTLYCRMQMERIMPHELTMA 505

Query: 421 SVLRACSSLAALEQGKQIHARTIKYGFNLEVPVGSALSTMYAKCGSLEDGNLVFRRMPTR 480
           SVLRACSSLAALEQGKQIHA+TIKYGF+LEVP+GSALSTMYAKCGSLEDGNLVFRRMP+R
Sbjct: 506 SVLRACSSLAALEQGKQIHAQTIKYGFSLEVPIGSALSTMYAKCGSLEDGNLVFRRMPSR 565

Query: 481 DIVSWNAMISGLSQNGEGLKALELFEEMRQGLTKPDYVTFVNILSACSHMGLVERGKVYF 540
           DI++WNAMISGLSQNGEGLKALELFEE+R G TKPDYVTFVN+LSACSHMGLVERGKVYF
Sbjct: 566 DIMTWNAMISGLSQNGEGLKALELFEELRHGTTKPDYVTFVNVLSACSHMGLVERGKVYF 625

Query: 541 KMMLDEFGIVPRVEHYACMVDILSRAGKLLEAKEFIESATIDHGMYLWRILLGACRNYRN 600
           +MMLDEFGI+PRVEHYACMVDILSRAGKL E KEFIESATIDHGM LWRILLGACRNYRN
Sbjct: 626 RMMLDEFGIIPRVEHYACMVDILSRAGKLHETKEFIESATIDHGMCLWRILLGACRNYRN 685

Query: 601 YELGAYAGEKLMELGSEESSAYVLLSSIYASLGRSDDVERVRRAMKLRGVNKDPGCSWIE 660
           YELGAYAGEKLMELGS+ESSAY+LLSSIY +LGRSDDVERVRR MKLRGVNK+PGCSWIE
Sbjct: 686 YELGAYAGEKLMELGSQESSAYILLSSIYTALGRSDDVERVRRLMKLRGVNKEPGCSWIE 745

Query: 661 LKSQVHVFVVGDQIHPEIVNIRVELRRLSKHMKDERSESPDDTDSIRL 708
           LKSQVHVFVVGDQIHP+IV I  ELRRL  HMKDE  ES +DT+S+ L
Sbjct: 746 LKSQVHVFVVGDQIHPQIVKICSELRRLRDHMKDECYESFNDTNSMTL 793

BLAST of CmoCh12G003340 vs. NCBI nr
Match: gi|645251363|ref|XP_008231644.1| (PREDICTED: pentatricopeptide repeat-containing protein At2g33680 [Prunus mume])

HSP 1 Score: 1078.5 bits (2788), Expect = 0.0e+00
Identity = 541/699 (77.40%), Postives = 606/699 (86.70%), Query Frame = 1

Query: 1   MSLHLLP-QHRALFNSLLRYTSHKDFQKGKAIHAHLLRTGSISSVYLSNSLVNLYAKCGS 60
           MSL  LP Q+R+LF +L++Y+  KD QKGKA+HA +++TG  S VY++NSLVNLYAKCG 
Sbjct: 1   MSLSSLPSQYRSLFTTLIQYSRQKDLQKGKALHAQIIKTGPNSCVYIANSLVNLYAKCGD 60

Query: 61  LVKAKLVFDSITNKDVVSWNSLINAYSQQGPVGSSFVMELFQRMRAENTLPNAHTFAGVF 120
           L KAKLVF++I +KDVVSWNSLIN YSQQG  GSS VMELFQRMRAEN  PNAHTFAGVF
Sbjct: 61  LPKAKLVFEAIPDKDVVSWNSLINGYSQQGQNGSSHVMELFQRMRAENAFPNAHTFAGVF 120

Query: 121 TAASSLF-ETLGGLQAHALSIKTSSFYDVFVGSSLLNMYCKIGCLLDARKVFDRMPERNS 180
           TAAS    +  GG QAHAL+IK  SFYDVFVGSSLLNMYCK G +LDARKVFDRM ERNS
Sbjct: 121 TAASYASPDVFGGRQAHALAIKADSFYDVFVGSSLLNMYCKAGLVLDARKVFDRMLERNS 180

Query: 181 VSWATMISGYAMQRKAFEAWELFLLMCRGEGIH---NEFIYTSVLSGLTVPELVDSGKQI 240
           VSWATMISGYA+QR A +A  LF LM R   +    NEF+ T VLS L +PE V +GKQI
Sbjct: 181 VSWATMISGYAVQRLAGDALALFGLMRRRNEVKEEVNEFVLTGVLSALALPEFVGTGKQI 240

Query: 241 HCLALKNGLLSIVSVGNALVTMYAKCGCLDDALKTFELSGDKNSITWSAMITGYAQAGNS 300
           H LA+K GL+S VSV NALVTMYAKCG LDDAL+TF+ SGDKNSITWSAMITG+AQ+G+S
Sbjct: 241 HSLAVKIGLISFVSVENALVTMYAKCGSLDDALRTFKTSGDKNSITWSAMITGFAQSGDS 300

Query: 301 HEALKLFSYMHFNGNKPSEFTFVGVINACSDLGALEEGKQMHGYSLKMGYESQIYIITAL 360
            +AL LFS+MHF+G  PSEFTFVGVINACSD+GALEEGKQMH YSLK+G+E QIYI+TAL
Sbjct: 301 QKALDLFSHMHFSGVMPSEFTFVGVINACSDIGALEEGKQMHSYSLKLGFEFQIYIMTAL 360

Query: 361 VDMYAKSGSLVDARKGFDYLKEPDIVLWTSMIGGYVQNGENETALTLYCRMQMEGIMPNE 420
           VDMYAK G++ DARKGFDYL+EPDIVLWTSMIGGYVQNGENE +LTLYCRMQ EG+MPNE
Sbjct: 361 VDMYAKCGNVSDARKGFDYLREPDIVLWTSMIGGYVQNGENEASLTLYCRMQREGMMPNE 420

Query: 421 LTMASVLRACSSLAALEQGKQIHARTIKYGFNLEVPVGSALSTMYAKCGSLEDGNLVFRR 480
           LTMASVL+ACSSL+A EQG+QIHARTIKYGF+LEVP+GSALSTMYAKCG+LEDGNLVFRR
Sbjct: 421 LTMASVLKACSSLSAFEQGRQIHARTIKYGFSLEVPIGSALSTMYAKCGNLEDGNLVFRR 480

Query: 481 MPTRDIVSWNAMISGLSQNGEGLKALELFEEMRQGLTKPDYVTFVNILSACSHMGLVERG 540
           MP RD VSWNAMISGLSQNG G +ALELFEEMR    KPDY+TFVNILSACSHMGLVERG
Sbjct: 481 MPMRDTVSWNAMISGLSQNGRGTEALELFEEMRLEGAKPDYITFVNILSACSHMGLVERG 540

Query: 541 KVYFKMMLDEFGIVPRVEHYACMVDILSRAGKLLEAKEFIESATIDHGMYLWRILLGACR 600
            +YF MM +EFGI PRV+HYACMVD+LSRAGKL EAKEFIESATIDHGM LWRILL ACR
Sbjct: 541 WIYFNMMSNEFGIGPRVDHYACMVDVLSRAGKLDEAKEFIESATIDHGMCLWRILLSACR 600

Query: 601 NYRNYELGAYAGEKLMELGSEESSAYVLLSSIYASLGRSDDVERVRRAMKLRGVNKDPGC 660
           NY NYELGAY GEKLMELGS+ESSAYVLLSSIY +LG S DVERVR  MKLRGV+K+PGC
Sbjct: 601 NYHNYELGAYVGEKLMELGSQESSAYVLLSSIYTALGSSKDVERVRSLMKLRGVSKEPGC 660

Query: 661 SWIELKSQVHVFVVGDQIHPEIVNIRVELRRLSKHMKDE 695
           SWIELKSQVHVFVVGD++HP+I N+R E+RRL KHMKD+
Sbjct: 661 SWIELKSQVHVFVVGDEMHPQIENVRHEIRRLMKHMKDK 699

BLAST of CmoCh12G003340 vs. NCBI nr
Match: gi|225459793|ref|XP_002284799.1| (PREDICTED: pentatricopeptide repeat-containing protein At2g33680 [Vitis vinifera])

HSP 1 Score: 1072.8 bits (2773), Expect = 2.2e-310
Identity = 539/702 (76.78%), Postives = 607/702 (86.47%), Query Frame = 1

Query: 6   LPQHRALFNSLLRYTSHKDFQKGKAIHAHLLRTGSISSVYLSNSLVNLYAKCGSLVKAKL 65
           LP +R+ F +LL+YT ++  QKGKA+HA ++++ S S VY++NSLVNLYAKC  L +AK 
Sbjct: 3   LPSNRSFFTALLQYTHNRSLQKGKALHAQIIKSSS-SCVYIANSLVNLYAKCQRLREAKF 62

Query: 66  VFDSITNKDVVSWNSLINAYSQQGPVGSSFVMELFQRMRAENTLPNAHTFAGVFTAASSL 125
           VF+ I NKDVVSWN +IN YSQ GP GSS VMELFQRMRAENT PNAHTFAGVFTAAS+L
Sbjct: 63  VFERIQNKDVVSWNCIINGYSQHGPSGSSHVMELFQRMRAENTAPNAHTFAGVFTAASTL 122

Query: 126 FETLGGLQAHALSIKTSSFYDVFVGSSLLNMYCKIGCLLDARKVFDRMPERNSVSWATMI 185
            +  GG  AHA++IK  S  DVFVGSSL+NMYCK G   +ARKVFD MPERNSVSWATMI
Sbjct: 123 VDAAGGRLAHAVAIKMDSCRDVFVGSSLMNMYCKAGLTPEARKVFDTMPERNSVSWATMI 182

Query: 186 SGYAMQRKAFEAWELFLLMCRGEGIHNEFIYTSVLSGLTVPELVDSGKQIHCLALKNGLL 245
           SGYA Q+ A EA  LF LM R E   NEF++TSVLS LT+PELV++GKQIHC+A+KNGLL
Sbjct: 183 SGYASQKLAAEALGLFRLMRREEEGENEFVFTSVLSALTLPELVNNGKQIHCIAVKNGLL 242

Query: 246 SIVSVGNALVTMYAKCGCLDDALKTFELSGDKNSITWSAMITGYAQAGNSHEALKLFSYM 305
           SIVSVGNALVTMYAKCG LDDAL+TFE S DKNSITWSAMITGYAQ+G+S +ALKLFS M
Sbjct: 243 SIVSVGNALVTMYAKCGSLDDALQTFETSSDKNSITWSAMITGYAQSGDSDKALKLFSSM 302

Query: 306 HFNGNKPSEFTFVGVINACSDLGALEEGKQMHGYSLKMGYESQIYIITALVDMYAKSGSL 365
           H +G +PSEFTFVGVINACSDLGA  EGKQ+H Y LK+G+ESQIY++TALVDMYAK  S+
Sbjct: 303 HLSGIRPSEFTFVGVINACSDLGAAWEGKQVHDYLLKLGFESQIYVMTALVDMYAKCSSI 362

Query: 366 VDARKGFDYLKEPDIVLWTSMIGGYVQNGENETALTLYCRMQMEGIMPNELTMASVLRAC 425
           VDARKGFDYL+EPDIVLWTSMIGGYVQNGENE AL+LY RM+MEGI+PNELTMASVL+AC
Sbjct: 363 VDARKGFDYLQEPDIVLWTSMIGGYVQNGENEDALSLYGRMEMEGILPNELTMASVLKAC 422

Query: 426 SSLAALEQGKQIHARTIKYGFNLEVPVGSALSTMYAKCGSLEDGNLVFRRMPTRDIVSWN 485
           SSLAALEQGKQIHART+KYGF LEVP+GSALSTMYAKCG L+DG LVFRRMP RD++SWN
Sbjct: 423 SSLAALEQGKQIHARTVKYGFGLEVPIGSALSTMYAKCGCLKDGTLVFRRMPARDVISWN 482

Query: 486 AMISGLSQNGEGLKALELFEEMRQGLTKPDYVTFVNILSACSHMGLVERGKVYFKMMLDE 545
           AMISGLSQNG G +ALELFEEM+   TKPDYVTFVNILSACSHMGLVERG  YF+MM DE
Sbjct: 483 AMISGLSQNGCGKEALELFEEMQLEGTKPDYVTFVNILSACSHMGLVERGWGYFRMMFDE 542

Query: 546 FGIVPRVEHYACMVDILSRAGKLLEAKEFIESATIDHGMYLWRILLGACRNYRNYELGAY 605
           FG+ PRVEHYACMVDILSRAGKL EA EF ESATIDHGM LWRI+LGACRNYRNYELGAY
Sbjct: 543 FGMDPRVEHYACMVDILSRAGKLKEAIEFTESATIDHGMCLWRIILGACRNYRNYELGAY 602

Query: 606 AGEKLMELGSEESSAYVLLSSIYASLGRSDDVERVRRAMKLRGVNKDPGCSWIELKSQVH 665
           AGEKLMELGS+ESSAYVLLSSIY++LGR +DVERVRR MKLRGV+K+PGCSWIELKS VH
Sbjct: 603 AGEKLMELGSQESSAYVLLSSIYSALGRWEDVERVRRMMKLRGVSKEPGCSWIELKSGVH 662

Query: 666 VFVVGDQIHPEIVNIRVELRRLSKHMKDERSESPDDTDSIRL 708
           VFVV DQ+HP+I +I VELR+LSK MKDE  E   D+ S  L
Sbjct: 663 VFVVKDQMHPQIGDIHVELRQLSKQMKDEGYEPATDSFSAAL 703

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
PP181_ARATH5.3e-23959.60Pentatricopeptide repeat-containing protein At2g33680 OS=Arabidopsis thaliana GN... [more]
PP220_ARATH4.2e-13538.76Pentatricopeptide repeat-containing protein At3g09040, mitochondrial OS=Arabidop... [more]
PP172_ARATH1.3e-12837.17Pentatricopeptide repeat-containing protein At2g27610 OS=Arabidopsis thaliana GN... [more]
PP357_ARATH7.2e-12737.35Pentatricopeptide repeat-containing protein At4g39530 OS=Arabidopsis thaliana GN... [more]
PP307_ARATH4.7e-12635.75Pentatricopeptide repeat-containing protein At4g13650 OS=Arabidopsis thaliana GN... [more]
Match NameE-valueIdentityDescription
A0A0A0LK41_CUCSA0.0e+0085.73Uncharacterized protein OS=Cucumis sativus GN=Csa_2G348180 PE=4 SV=1[more]
E0CQU2_VITVI1.5e-31076.78Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0001g00570 PE=4 SV=... [more]
B9R8H7_RICCO6.0e-30674.33Pentatricopeptide repeat-containing protein, putative OS=Ricinus communis GN=RCO... [more]
A0A067KKT6_JATCU1.3e-30573.68Uncharacterized protein OS=Jatropha curcas GN=JCGZ_08147 PE=4 SV=1[more]
A0A061EFJ3_THECC1.1e-30475.51Tetratricopeptide repeat-like superfamily protein OS=Theobroma cacao GN=TCM_0110... [more]
Match NameE-valueIdentityDescription
AT2G33680.13.0e-24059.60 Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT3G09040.12.4e-13638.76 Pentatricopeptide repeat (PPR) superfamily protein[more]
AT2G27610.17.4e-13037.17 Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT4G39530.14.1e-12837.35 Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT4G13650.12.6e-12735.75 Pentatricopeptide repeat (PPR) superfamily protein[more]
Match NameE-valueIdentityDescription
gi|659089060|ref|XP_008445307.1|0.0e+0086.58PREDICTED: pentatricopeptide repeat-containing protein At2g33680 [Cucumis melo][more]
gi|778670421|ref|XP_004142988.2|0.0e+0085.73PREDICTED: pentatricopeptide repeat-containing protein At2g33680 [Cucumis sativu... [more]
gi|700207161|gb|KGN62280.1|0.0e+0085.73hypothetical protein Csa_2G348180 [Cucumis sativus][more]
gi|645251363|ref|XP_008231644.1|0.0e+0077.40PREDICTED: pentatricopeptide repeat-containing protein At2g33680 [Prunus mume][more]
gi|225459793|ref|XP_002284799.1|2.2e-31076.78PREDICTED: pentatricopeptide repeat-containing protein At2g33680 [Vitis vinifera... [more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR002885Pentatricopeptide_repeat
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
molecular_function GO:0005515 protein binding
molecular_function GO:0008270 zinc ion binding

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh12G003340.1CmoCh12G003340.1mRNA


Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 48..73
score: 0.14coord: 151..177
score: 3.4E-4coord: 76..103
score: 0.031coord: 252..272
score: 0.15coord: 179..206
score: 0.
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 378..426
score: 4.1E-10coord: 480..527
score: 2.5E-10coord: 277..324
score: 4.6
IPR002885Pentatricopeptide repeatTIGRFAMsTIGR00756TIGR00756coord: 179..206
score: 2.8E-4coord: 152..177
score: 4.6E-4coord: 381..415
score: 8.6E-6coord: 280..313
score: 2.1E-7coord: 482..508
score: 1.
IPR002885Pentatricopeptide repeatPROFILEPS51375PPRcoord: 247..277
score: 5.656coord: 43..73
score: 6.785coord: 379..413
score: 11.301coord: 212..246
score: 6.193coord: 278..312
score: 11.992coord: 348..378
score: 5.821coord: 146..180
score: 9.383coord: 617..651
score: 7.454coord: 74..110
score: 10.468coord: 515..550
score: 7.541coord: 313..347
score: 7.432coord: 449..479
score: 5.711coord: 414..448
score: 6.489coord: 480..514
score: 11.531coord: 551..586
score: 6
NoneNo IPR availablePANTHERPTHR24015FAMILY NOT NAMEDcoord: 26..313
score: 0.0coord: 349..658
score:
NoneNo IPR availablePANTHERPTHR24015:SF47SUBFAMILY NOT NAMEDcoord: 349..658
score: 0.0coord: 26..313
score: