BLAST of ClCG08G013940 vs. Swiss-Prot
Match:
PP181_ARATH (Pentatricopeptide repeat-containing protein At2g33680 OS=Arabidopsis thaliana GN=PCMP-E19 PE=3 SV=1)
HSP 1 Score: 817.0 bits (2109), Expect = 1.8e-235
Identity = 410/700 (58.57%), Postives = 513/700 (73.29%), Query Frame = 1
Query: 71 PQHRSFFNLLLRYTHQKDLQKGKAIHAQLLRTGSFSSVYLTNSLVNLYAKCGSLVKAKLV 130
P + L ++ Q++L G+A+H Q++RTG+ + + N LVN YAKCG L KA +
Sbjct: 12 PHTSTLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHSI 71
Query: 131 FESITNKDVVSWNCLINAYSQQGPVGCSF-VMELFQRMRAENTLPNAHTFAGVFTAASSS 190
F +I KDVVSWN LI YSQ G + S+ VM+LF+ MRA++ LPNA+T AG+F A SS
Sbjct: 72 FNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSL 131
Query: 191 LETFGGLQAHALAIKTSSFYDVFVGSSLLNMYCKIGCLLDARKVFDRIPERNSVSWSTMI 250
+ G QAHAL +K SSF D++V +SL+ MYCK G + D KVF +PERN+ +WSTM+
Sbjct: 132 QSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMV 191
Query: 251 SGYAMERMASEAWELFLLLRRE--EGIHNEFIYTGVLSALTVPELVHYGKQIHCLAFKNG 310
SGYA EA ++F L RE EG +++++T VLS+L V G+QIHC+ KNG
Sbjct: 192 SGYATRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAATIYVGLGRQIHCITIKNG 251
Query: 311 LLSIVSVGNALVTMYGKCGCLDDALKTFEFSGDKNSITWSAMITGYAQAGDSHEALKLFS 370
LL V++ NALVTMY KC L++A K F+ SGD+NSITWSAM+TGY+Q G+S EA+KLFS
Sbjct: 252 LLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFS 311
Query: 371 YMHFNGNKPSEFTFVGVINACSDIGALKEGKQMHGYSLKMGYESQIYIMTALVDMYAKCG 430
M G KPSE+T VGV+NACSDI L+EGKQ+H + LK+G+E ++ TALVDMYAK G
Sbjct: 312 RMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAG 371
Query: 431 SLVDARNGFDYLKEPDIVLWTSMIGGYAQNGENETALTLYCRMQMEGILPNELTMASVLR 490
L DAR GFD L+E D+ LWTS+I GY QN +NE AL LY RM+ GI+PN+ TMASVL+
Sbjct: 372 CLADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLK 431
Query: 491 ACSSLAALEQGKQIHARTIKYGFNLEVPIGSALSTMYAKCGSLEDGNLVFRRMPTRDILS 550
ACSSLA LE GKQ+H TIK+GF LEVPIGSALSTMY+KCGSLEDGNLVFRR P +D++S
Sbjct: 432 ACSSLATLELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVVS 491
Query: 551 WNAMISGLSQNGEGFKALELFEEMRQGTTKPDYVTFVNILSACSHMGLVERGKVYFKMMR 610
WNAMISGLS NG+G +ALELFEEM +PD VTFVNI+SACSH G VERG YF MM
Sbjct: 492 WNAMISGLSHNGQGDEALELFEEMLAEGMEPDDVTFVNIISACSHKGFVERGWFYFNMMS 551
Query: 611 DEFGIVPRVEHYACMVDILSRAGKLQEAKEFIESVTIDHGMYLWRILLGACRNYRNYELG 670
D+ G+ P+V+HYACMVD+LSRAG+L+EAKEFIES IDHG+ LWRILL AC+N+ ELG
Sbjct: 552 DQIGLDPKVDHYACMVDLLSRAGQLKEAKEFIESANIDHGLCLWRILLSACKNHGKCELG 611
Query: 671 AYAGEKLMELGSEESSAYVLLSSIYAALGRSDDVERVRRVMKLRGVNKDPGCSWIELKSQ 730
YAGEKLM LGS ESS YV LS IY ALGR DVERV + M+ GV+K+ GCSWIELK+Q
Sbjct: 612 VYAGEKLMALGSRESSTYVQLSGIYTALGRMRDVERVWKHMRANGVSKEVGCSWIELKNQ 671
Query: 731 VHVFVVGDQIHPQIVNIRSELRRLRKHMKDECYESPDDTN 768
HVFVVGD +HP I + + + + M +E + + D++
Sbjct: 672 YHVFVVGDTMHPMIEETKDLVCLVSRQMIEEGFVTVLDSS 711
BLAST of ClCG08G013940 vs. Swiss-Prot
Match:
PP220_ARATH (Pentatricopeptide repeat-containing protein At3g09040, mitochondrial OS=Arabidopsis thaliana GN=PCMP-E88 PE=2 SV=1)
HSP 1 Score: 476.5 bits (1225), Expect = 5.6e-133
Identity = 261/680 (38.38%), Postives = 401/680 (58.97%), Query Frame = 1
Query: 88 DLQKGKAIHAQLLRTGSFSSVYLTNSLVNLYAKCGSLVKAKLVFESITNKDVVSWNCLIN 147
+L G +HA+ ++ G S++Y+ +SLV++Y+KC + A VFE++ K+ V WN +I
Sbjct: 342 NLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIR 401
Query: 148 AYSQQGPVGCSFVMELFQRMRAENTLPNAHTFAGVFTAASSSLETFGGLQAHALAIKTSS 207
Y+ G VMELF M++ + TF + + ++S + G Q H++ IK
Sbjct: 402 GYAHNGE--SHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKL 461
Query: 208 FYDVFVGSSLLNMYCKIGCLLDARKVFDRIPERNSVSWSTMISGYAMERMASEAWELFLL 267
++FVG++L++MY K G L DAR++F+R+ +R++V+W+T+I Y + SEA++LF
Sbjct: 462 AKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKR 521
Query: 268 LRREEGIHNEFIYTGVLSALTVPELVHYGKQIHCLAFKNGLLSIVSVGNALVTMYGKCGC 327
+ + + L A T ++ GKQ+HCL+ K GL + G++L+ MY KCG
Sbjct: 522 MNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGI 581
Query: 328 LDDALKTFEFSGDKNSITWSAMITGYAQAGDSHEALKLFSYMHFNGNKPSEFTFVGVINA 387
+ DA K F + + ++ +A+I GY+Q + EA+ LF M G PSE TF ++ A
Sbjct: 582 IKDARKVFSSLPEWSVVSMNALIAGYSQ-NNLEEAVVLFQEMLTRGVNPSEITFATIVEA 641
Query: 388 CSDIGALKEGKQMHGYSLKMGYESQ-IYIMTALVDMYAKCGSLVDARNGFDYLKEP-DIV 447
C +L G Q HG K G+ S+ Y+ +L+ MY + +A F L P IV
Sbjct: 642 CHKPESLTLGTQFHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEACALFSELSSPKSIV 701
Query: 448 LWTSMIGGYAQNGENETALTLYCRMQMEGILPNELTMASVLRACSSLAALEQGKQIHART 507
LWT M+ G++QNG E AL Y M+ +G+LP++ T +VLR CS L++L +G+ IH+
Sbjct: 702 LWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGRAIHSLI 761
Query: 508 IKYGFNLEVPIGSALSTMYAKCGSLEDGNLVFRRMPTR-DILSWNAMISGLSQNGEGFKA 567
+L+ + L MYAKCG ++ + VF M R +++SWN++I+G ++NG A
Sbjct: 762 FHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLINGYAKNGYAEDA 821
Query: 568 LELFEEMRQGTTKPDYVTFVNILSACSHMGLVERGKVYFKMMRDEFGIVPRVEHYACMVD 627
L++F+ MRQ PD +TF+ +L+ACSH G V G+ F+MM ++GI RV+H ACMVD
Sbjct: 822 LKIFDSMRQSHIMPDEITFLGVLTACSHAGKVSDGRKIFEMMIGQYGIEARVDHVACMVD 881
Query: 628 ILSRAGKLQEAKEFIESVTIDHGMYLWRILLGACRNYRNYELGAYAGEKLMELGSEESSA 687
+L R G LQEA +FIE+ + LW LLGACR + + G + EKL+EL + SSA
Sbjct: 882 LLGRWGYLQEADDFIEAQNLKPDARLWSSLLGACRIHGDDIRGEISAEKLIELEPQNSSA 941
Query: 688 YVLLSSIYAALGRSDDVERVRRVMKLRGVNKDPGCSWIELKSQVHVFVVGDQIHPQIVNI 747
YVLLS+IYA+ G + +R+VM+ RGV K PG SWI+++ + H+F GD+ H +I I
Sbjct: 942 YVLLSNIYASQGCWEKANALRKVMRDRGVKKVPGYSWIDVEQRTHIFAAGDKSHSEIGKI 1001
Query: 748 RSELRRLRKHMKDECYESPD 765
L L MKD+ +PD
Sbjct: 1002 EMFLEDLYDLMKDDAVVNPD 1018
HSP 2 Score: 294.3 bits (752), Expect = 3.9e-78
Identity = 178/576 (30.90%), Postives = 292/576 (50.69%), Query Frame = 1
Query: 113 SLVNLYAKCGSLVKAKLVFESITNKDVVSWNCLINAYSQQGPVGCSFV-MELFQRMRAEN 172
+++N Y + G L A+L+F +++ DVV+WN +I+ + ++G C V +E F MR +
Sbjct: 266 TVINTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRG---CETVAIEYFFNMRKSS 325
Query: 173 TLPNAHTFAGVFTAASSSLETFGGLQAHALAIKTSSFYDVFVGSSLLNMYCKIGCLLDAR 232
T V +A GL HA AIK +++VGSSL++MY K + A
Sbjct: 326 VKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAA 385
Query: 233 KVFDRIPERNSVSWSTMISGYAMERMASEAWELFLLLRREEGIHNEFIYTGVLSALTVPE 292
KVF+ + E+N V W+ MI GYA + + ELF+ ++ ++F +T +LS
Sbjct: 386 KVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASH 445
Query: 293 LVHYGKQIHCLAFKNGLLSIVSVGNALVTMYGKCGCLDDALKTFEFSGDKNSITWSAMIT 352
+ G Q H + K L + VGNALV MY KCG L+DA + FE D++++TW+ +I
Sbjct: 446 DLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIG 505
Query: 353 GYAQAGDSHEALKLFSYMHFNGNKPSEFTFVGVINACSDIGALKEGKQMHGYSLKMGYES 412
Y Q + EA LF M+ G + AC+ + L +GKQ+H S+K G +
Sbjct: 506 SYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDR 565
Query: 413 QIYIMTALVDMYAKCGSLVDARNGFDYLKEPDIVLWTSMIGGYAQNGENETALTLYCRMQ 472
++ ++L+DMY+KCG + DAR F L E +V ++I GY+QN E A+ L+ M
Sbjct: 566 DLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQNNLEE-AVVLFQEML 625
Query: 473 MEGILPNELTMASVLRACSSLAALEQGKQIHARTIKYGFNLEVP-IGSALSTMYAKCGSL 532
G+ P+E+T A+++ AC +L G Q H + K GF+ E +G +L MY +
Sbjct: 626 TRGVNPSEITFATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLGISLLGMYMNSRGM 685
Query: 533 EDGNLVFRRMPT-RDILSWNAMISGLSQNGEGFKALELFEEMRQGTTKPDYVTFVNILSA 592
+ +F + + + I+ W M+SG SQNG +AL+ ++EMR PD TFV +L
Sbjct: 686 TEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRV 745
Query: 593 CSHMGLVERGKVYFKMMRDEFGIVPRVEHYA--CMVDILSRAGKLQEAKEFIESVTIDHG 652
CS + + G+ ++ F + ++ ++D+ ++ G ++ + + + +
Sbjct: 746 CSVLSSLREGRAIHSLI---FHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMRRRSN 805
Query: 653 MYLWRILLGACRNYRNYELGAYAGEKLMELGSEESS 684
+ W L+ Y YA + L S S
Sbjct: 806 VVSWNSLI------NGYAKNGYAEDALKIFDSMRQS 828
HSP 3 Score: 280.8 bits (717), Expect = 4.5e-74
Identity = 171/523 (32.70%), Postives = 264/523 (50.48%), Query Frame = 1
Query: 69 VLPQHRSFFNLLLRYTHQKDLQKGKAIHAQLLRTGSFSSVYLTNSLVNLYAKCGSLVKAK 128
+ P +F +L + +++ G+ IH +++ G + Y +LV++YAKC + A+
Sbjct: 156 IFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDAR 215
Query: 129 LVFESITNKDVVSWNCLINAYSQQG-PVGCSFVMELFQRMRAENTLPNAHTFAGVFTAAS 188
VFE I + + V W CL + Y + G P V F+RMR E P+ F V
Sbjct: 216 RVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLV---FERMRDEGHRPDHLAFVTVI---- 275
Query: 189 SSLETFGGLQAHALAIKTSSFYDVFVGSSLLNMYCKIGCLLDARKVFDRIPERNSVSWST 248
++ G L+ L S DV V+W+
Sbjct: 276 NTYIRLGKLKDARLLFGEMSSPDV-------------------------------VAWNV 335
Query: 249 MISGYAMERMASEAWELFLLLRREEGIHNEFIYTGVLSALTVPELVHYGKQIHCLAFKNG 308
MISG+ + A E F +R+ VLSA+ + + G +H A K G
Sbjct: 336 MISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLG 395
Query: 309 LLSIVSVGNALVTMYGKCGCLDDALKTFEFSGDKNSITWSAMITGYAQAGDSHEALKLFS 368
L S + VG++LV+MY KC ++ A K FE +KN + W+AMI GYA G+SH+ ++LF
Sbjct: 396 LASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFM 455
Query: 369 YMHFNGNKPSEFTFVGVINACSDIGALKEGKQMHGYSLKMGYESQIYIMTALVDMYAKCG 428
M +G +FTF +++ C+ L+ G Q H +K +++ ALVDMYAKCG
Sbjct: 456 DMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCG 515
Query: 429 SLVDARNGFDYLKEPDIVLWTSMIGGYAQNGENETALTLYCRMQMEGILPNELTMASVLR 488
+L DAR F+ + + D V W ++IG Y Q+ A L+ RM + GI+ + +AS L+
Sbjct: 516 ALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLK 575
Query: 489 ACSSLAALEQGKQIHARTIKYGFNLEVPIGSALSTMYAKCGSLEDGNLVFRRMPTRDILS 548
AC+ + L QGKQ+H ++K G + ++ GS+L MY+KCG ++D VF +P ++S
Sbjct: 576 ACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVS 635
Query: 549 WNAMISGLSQNGEGFKALELFEEMRQGTTKPDYVTFVNILSAC 591
NA+I+G SQN +A+ LF+EM P +TF I+ AC
Sbjct: 636 MNALIAGYSQNNLE-EAVVLFQEMLTRGVNPSEITFATIVEAC 639
HSP 4 Score: 247.7 bits (631), Expect = 4.2e-64
Identity = 163/554 (29.42%), Postives = 268/554 (48.38%), Query Frame = 1
Query: 89 LQKGKAIHAQLLRTGSFSSVYLTNSLVNLYAKCGSLVKAKLVFESITNKDVVSWNCLINA 148
L+ GKA+H++ L G S L N++V+LYAKC + A+ F+ + KDV +WN +++
Sbjct: 76 LRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFL-EKDVTAWNSMLSM 135
Query: 149 YSQQGPVGCSFVMELFQRMRAENTLPNAHTFAGVFTAASSSLETFGGLQAHALAIKTSSF 208
YS G G V+ F + PN TF+ V + + G Q H IK
Sbjct: 136 YSSIGKPGK--VLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLE 195
Query: 209 YDVFVGSSLLNMYCKIGCLLDARKVFDRIPERNSVSWSTMISGYAMERMASEAWELFLLL 268
+ + G +L++MY K + DAR+VF+ I + N+V W+ + SGY + EA +F +
Sbjct: 196 RNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERM 255
Query: 269 RREEGIHNEFIYTGVLSALTVPELVHYGKQIHCLAFKNGLLSIVSVGNALVTMYGKCGCL 328
R E G + LAF ++ Y + G L
Sbjct: 256 RDE------------------------GHRPDHLAFVT-----------VINTYIRLGKL 315
Query: 329 DDALKTFEFSGDKNSITWSAMITGYAQAGDSHEALKLFSYMHFNGNKPSEFTFVGVINAC 388
DA F + + W+ MI+G+ + G A++ F M + K + T V++A
Sbjct: 316 KDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAI 375
Query: 389 SDIGALKEGKQMHGYSLKMGYESQIYIMTALVDMYAKCGSLVDARNGFDYLKEPDIVLWT 448
+ L G +H ++K+G S IY+ ++LV MY+KC + A F+ L+E + V W
Sbjct: 376 GIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWN 435
Query: 449 SMIGGYAQNGENETALTLYCRMQMEGILPNELTMASVLRACSSLAALEQGKQIHARTIKY 508
+MI GYA NGE+ + L+ M+ G ++ T S+L C++ LE G Q H+ IK
Sbjct: 436 AMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKK 495
Query: 509 GFNLEVPIGSALSTMYAKCGSLEDGNLVFRRMPTRDILSWNAMISGLSQNGEGFKALELF 568
+ +G+AL MYAKCG+LED +F RM RD ++WN +I Q+ +A +LF
Sbjct: 496 KLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLF 555
Query: 569 EEMRQGTTKPDYVTFVNILSACSHMGLVERGKVYFKMMRDEFGIVPRVEHYACMVDILSR 628
+ M D + L AC+H+ + +GK + + G+ + + ++D+ S+
Sbjct: 556 KRMNLCGIVSDGACLASTLKACTHVHGLYQGK-QVHCLSVKCGLDRDLHTGSSLIDMYSK 590
Query: 629 AGKLQEAKEFIESV 643
G +++A++ S+
Sbjct: 616 CGIIKDARKVFSSL 590
HSP 5 Score: 170.2 bits (430), Expect = 8.6e-41
Identity = 126/481 (26.20%), Postives = 212/481 (44.07%), Query Frame = 1
Query: 213 VGSSLLNMYCKIGCLLDARKVFDRIPERNSVSWSTMISGYAMERMASEAWELFLLLRREE 272
+G++++++Y K + A K FD + E++ +W++M+S Y+ + F+ L +
Sbjct: 97 LGNAIVDLYAKCAQVSYAEKQFDFL-EKDVTAWNSMLSMYSSIGKPGKVLRSFVSLFENQ 156
Query: 273 GIHNEFIYTGVLSALTVPELVHYGKQIHCLAFKNGLLSIVSVGNALVTMYGKCGCLDDAL 332
N+F ++ VLS V +G+QIHC K GL G ALV MY KC + DA
Sbjct: 157 IFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDAR 216
Query: 333 KTFEFSGDKNSITWSAMITGYAQAGDSHEALKLFSYMHFNGNKPSEFTFVGVINACSDIG 392
+ +F ++ F G + A G
Sbjct: 217 R-------------------------------VFEWIVDPNTVCWTCLFSGYVKA----G 276
Query: 393 ALKEGKQMHGYSLKMGYESQIYIMTALVDMYAKCGSLVDARNGFDYLKEPDIVLWTSMIG 452
+E + G+ +++ Y + G L DAR F + PD+V W MI
Sbjct: 277 LPEEAVLVFERMRDEGHRPDHLAFVTVINTYIRLGKLKDARLLFGEMSSPDVVAWNVMIS 336
Query: 453 GYAQNGENETALTLYCRMQMEGILPNELTMASVLRACSSLAALEQGKQIHARTIKYGFNL 512
G+ + G A+ + M+ + T+ SVL A +A L+ G +HA IK G
Sbjct: 337 GHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLAS 396
Query: 513 EVPIGSALSTMYAKCGSLEDGNLVFRRMPTRDILSWNAMISGLSQNGEGFKALELFEEMR 572
+ +GS+L +MY+KC +E VF + ++ + WNAMI G + NGE K +ELF +M+
Sbjct: 397 NIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMK 456
Query: 573 QGTTKPDYVTFVNILSACSHMGLVERGKVYFKMMRDEFGIVPRVEHYACMVDILSRAGKL 632
D TF ++LS C+ +E G + ++ + + + +VD+ ++ G L
Sbjct: 457 SSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKK-KLAKNLFVGNALVDMYAKCGAL 516
Query: 633 QEAKEFIESVTIDHGMYLWRILLGACRNYRNYELGAYAGEKLMELGSEESSAYVLLSSIY 692
++A++ E + D W ++G+ N E A+ K M L S L S++
Sbjct: 517 EDARQIFERM-CDRDNVTWNTIIGSYVQDEN-ESEAFDLFKRMNLCGIVSDGACLASTLK 538
Query: 693 A 694
A
Sbjct: 577 A 538
HSP 6 Score: 73.9 bits (180), Expect = 8.4e-12
Identity = 42/136 (30.88%), Postives = 71/136 (52.21%), Query Frame = 1
Query: 69 VLPQHRSFFNLLLRYTHQKDLQKGKAIHAQLLRTGSFSSVYLTNSLVNLYAKCGSLVKAK 128
VLP +F +L + L++G+AIH+ + +N+L+++YAKCG + +
Sbjct: 728 VLPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKGSS 787
Query: 129 LVFESITNK-DVVSWNCLINAYSQQGPVGCSFVMELFQRMRAENTLPNAHTFAGVFTAAS 188
VF+ + + +VVSWN LIN Y++ G +++F MR + +P+ TF GV TA S
Sbjct: 788 QVFDEMRRRSNVVSWNSLINGYAKNG--YAEDALKIFDSMRQSHIMPDEITFLGVLTACS 847
Query: 189 SSLETFGGLQAHALAI 204
+ + G + + I
Sbjct: 848 HAGKVSDGRKIFEMMI 861
BLAST of ClCG08G013940 vs. Swiss-Prot
Match:
PP307_ARATH (Pentatricopeptide repeat-containing protein At4g13650 OS=Arabidopsis thaliana GN=PCMP-H42 PE=2 SV=2)
HSP 1 Score: 460.7 bits (1184), Expect = 3.2e-128
Identity = 246/695 (35.40%), Postives = 387/695 (55.68%), Query Frame = 1
Query: 69 VLPQHRSFFNLLLRYTHQKDLQKGKAIHAQLLRTGSFSSVYLTNSLVNLYAKCGSLVKAK 128
++P +F ++L + L+ G+ +H +L+ G S Y+ N+LV+LY G+L+ A+
Sbjct: 284 IMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAE 343
Query: 129 LVFESITNKDVVSWNCLINAYSQQGPVGCSF---VMELFQRMRAENTLPNAHTFAGVFTA 188
+F +++ +D V++N LIN SQ C + MELF+RM + P+++T A + A
Sbjct: 344 HIFSNMSQRDAVTYNTLINGLSQ-----CGYGEKAMELFKRMHLDGLEPDSNTLASLVVA 403
Query: 189 ASSSLETFGGLQAHALAIKTSSFYDVFVGSSLLNMYCKIGCLLDARKVFDRIPERNSVSW 248
S+ F G Q HA K + + +LLN+Y K + A F N V W
Sbjct: 404 CSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLW 463
Query: 249 STMISGYAMERMASEAWELFLLLRREEGIHNEFIYTGVLSALTVPELVHYGKQIHCLAFK 308
+ M+ Y + ++ +F ++ EE + N++ Y +L + G+QIH K
Sbjct: 464 NVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIK 523
Query: 309 NGLLSIVSVGNALVTMYGKCGCLDDALKTFEFSGDKNSITWSAMITGYAQAGDSHEALKL 368
V + L+ MY K G LD A K+ ++W+ MI GY Q +AL
Sbjct: 524 TNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTT 583
Query: 369 FSYMHFNGNKPSEFTFVGVINACSDIGALKEGKQMHGYSLKMGYESQIYIMTALVDMYAK 428
F M G + E ++AC+ + ALKEG+Q+H + G+ S + ALV +Y++
Sbjct: 584 FRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSR 643
Query: 429 CGSLVDARNGFDYLKEPDIVLWTSMIGGYAQNGENETALTLYCRMQMEGILPNELTMASV 488
CG + ++ F+ + D + W +++ G+ Q+G NE AL ++ RM EGI N T S
Sbjct: 644 CGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSA 703
Query: 489 LRACSSLAALEQGKQIHARTIKYGFNLEVPIGSALSTMYAKCGSLEDGNLVFRRMPTRDI 548
++A S A ++QGKQ+HA K G++ E + +AL +MYAKCGS+ D F + T++
Sbjct: 704 VKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNE 763
Query: 549 LSWNAMISGLSQNGEGFKALELFEEMRQGTTKPDYVTFVNILSACSHMGLVERGKVYFKM 608
+SWNA+I+ S++G G +AL+ F++M +P++VT V +LSACSH+GLV++G YF+
Sbjct: 764 VSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFES 823
Query: 609 MRDEFGIVPRVEHYACMVDILSRAGKLQEAKEFIESVTIDHGMYLWRILLGACRNYRNYE 668
M E+G+ P+ EHY C+VD+L+RAG L AKEFI+ + I +WR LL AC ++N E
Sbjct: 824 MNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHKNME 883
Query: 669 LGAYAGEKLMELGSEESSAYVLLSSIYAALGRSDDVERVRRVMKLRGVNKDPGCSWIELK 728
+G +A L+EL E+S+ YVLLS++YA + D + R+ MK +GV K+PG SWIE+K
Sbjct: 884 IGEFAAHHLLELEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEKGVKKEPGQSWIEVK 943
Query: 729 SQVHVFVVGDQIHPQIVNIRSELRRLRKHMKDECY 761
+ +H F VGDQ HP I + L K + Y
Sbjct: 944 NSIHSFYVGDQNHPLADEIHEYFQDLTKRASEIGY 973
HSP 2 Score: 275.8 bits (704), Expect = 1.5e-72
Identity = 178/578 (30.80%), Postives = 287/578 (49.65%), Query Frame = 1
Query: 89 LQKGKAIHAQLLRTGSFSSVYLTNSLVNLYAKCGSLVKAKLVFESITNKDVVSWNCLINA 148
L +G+ +H+Q+L+ G S+ L+ L + Y G L A VF+ + + + +WN +I
Sbjct: 101 LDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPERTIFTWNKMIKE 160
Query: 149 YSQQGPVGCSFVMELFQRMRAENTLPNAHTFAGVFTAASSSLETFGGL-QAHALAIKTSS 208
+ + +G V LF RM +EN PN TF+GV A F + Q HA +
Sbjct: 161 LASRNLIG--EVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARILYQGL 220
Query: 209 FYDVFVGSSLLNMYCKIGCLLDARKVFDRIPERNSVSWSTMISGYAMERMASEAWELFLL 268
V + L+++Y + G + AR+VFD + ++ SW MISG + +EA LF
Sbjct: 221 RDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCD 280
Query: 269 LRREEGIHNEFIYTGVLSALTVPELVHYGKQIHCLAFKNGLLSIVSVGNALVTMYGKCGC 328
+ + + ++ VLSA E + G+Q+H L K G S V NALV++Y G
Sbjct: 281 MYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGN 340
Query: 329 LDDALKTFEFSGDKNSITWSAMITGYAQAGDSHEALKLFSYMHFNGNKPSEFTFVGVINA 388
L A F ++++T++ +I G +Q G +A++LF MH +G +P T ++ A
Sbjct: 341 LISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVA 400
Query: 389 CSDIGALKEGKQMHGYSLKMGYESQIYIMTALVDMYAKCGSLVDARNGFDYLKEPDIVLW 448
CS G L G+Q+H Y+ K+G+ S I AL+++YAKC + A + F + ++VLW
Sbjct: 401 CSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLW 460
Query: 449 TSMIGGYAQNGENETALTLYCRMQMEGILPNELTMASVLRACSSLAALEQGKQIHARTIK 508
M+ Y + + ++ +MQ+E I+PN+ T S+L+ C L LE G+QIH++ IK
Sbjct: 461 NVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIK 520
Query: 509 YGFNLEVPIGSALSTMYAKCGSLEDGNLVFRRMPTRDILSWNAMISGLSQNGEGFKALEL 568
F L + S L MYAK G L+ + R +D++SW MI+G +Q KAL
Sbjct: 521 TNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTT 580
Query: 569 FEEMRQGTTKPDYVTFVNILSACSHMGLVERGKVYFKMMRDEFGIVPRVEHYACMVDILS 628
F +M + D V N +SAC+ + ++ G+ G + +V + S
Sbjct: 581 FRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQ-QIHAQACVSGFSSDLPFQNALVTLYS 640
Query: 629 RAGKLQEAKEFIESVTIDHGMYLWRILLGACRNYRNYE 666
R GK++E+ E + W L+ + N E
Sbjct: 641 RCGKIEESYLAFEQTEAGDNI-AWNALVSGFQQSGNNE 674
HSP 3 Score: 269.2 bits (687), Expect = 1.4e-70
Identity = 160/578 (27.68%), Postives = 294/578 (50.87%), Query Frame = 1
Query: 95 IHAQLLRTGSFSSVYLTNSLVNLYAKCGSLVKAKLVFESITNKDVVSWNCLINAYSQQGP 154
IHA++L G S + N L++LY++ G + A+ VF+ + KD SW +I+ S+
Sbjct: 209 IHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNE- 268
Query: 155 VGCSF-VMELFQRMRAENTLPNAHTFAGVFTAASSSLETFGGLQAHALAIKTSSFYDVFV 214
C + LF M +P + F+ V +A G Q H L +K D +V
Sbjct: 269 --CEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYV 328
Query: 215 GSSLLNMYCKIGCLLDARKVFDRIPERNSVSWSTMISGYAMERMASEAWELFLLLRREEG 274
++L+++Y +G L+ A +F + +R++V+++T+I+G + +A ELF + +
Sbjct: 329 CNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGL 388
Query: 275 IHNEFIYTGVLSALTVPELVHYGKQIHCLAFKNGLLSIVSVGNALVTMYGKCGCLDDALK 334
+ ++ A + + G+Q+H K G S + AL+ +Y KC ++ AL
Sbjct: 389 EPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALD 448
Query: 335 TFEFSGDKNSITWSAMITGYAQAGDSHEALKLFSYMHFNGNKPSEFTFVGVINACSDIGA 394
F + +N + W+ M+ Y D + ++F M P+++T+ ++ C +G
Sbjct: 449 YFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGD 508
Query: 395 LKEGKQMHGYSLKMGYESQIYIMTALVDMYAKCGSLVDARNGFDYLKEPDIVLWTSMIGG 454
L+ G+Q+H +K ++ Y+ + L+DMYAK G L A + D+V WT+MI G
Sbjct: 509 LELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAG 568
Query: 455 YAQNGENETALTLYCRMQMEGILPNELTMASVLRACSSLAALEQGKQIHARTIKYGFNLE 514
Y Q ++ ALT + +M GI +E+ + + + AC+ L AL++G+QIHA+ GF+ +
Sbjct: 569 YTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSD 628
Query: 515 VPIGSALSTMYAKCGSLEDGNLVFRRMPTRDILSWNAMISGLSQNGEGFKALELFEEMRQ 574
+P +AL T+Y++CG +E+ L F + D ++WNA++SG Q+G +AL +F M +
Sbjct: 629 LPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNR 688
Query: 575 GTTKPDYVTFVNILSACSHMGLVERGKVYFKMMRDEFGIVPRVEHYACMVDILSRAGKLQ 634
+ TF + + A S +++GK ++ + G E ++ + ++ G +
Sbjct: 689 EGIDNNNFTFGSAVKAASETANMKQGKQVHAVI-TKTGYDSETEVCNALISMYAKCGSIS 748
Query: 635 EA-KEFIESVTIDHGMYLWRILLGACRNYRNYELGAYA 671
+A K+F+E T + W ++ A Y + G+ A
Sbjct: 749 DAEKQFLEVSTKNE--VSWNAIINA---YSKHGFGSEA 777
HSP 4 Score: 109.4 bits (272), Expect = 1.8e-22
Identity = 79/255 (30.98%), Postives = 119/255 (46.67%), Query Frame = 1
Query: 348 AMITGYAQAGDSHEALKLFSYMHFNGNKPSEFTFVGVINACSDI-GALKEGKQMHGYSLK 407
A I+ Y +S + ++ S + G +P+ T ++ C G+L EG+++H LK
Sbjct: 55 AAISVYISEDESFQEKRIDSVEN-RGIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILK 114
Query: 408 MGYESQIYIMTALVDMYAKCGSLVDARNGFDYLKEPDIVLWTSMIGGYAQNGENETALTL 467
+G +S + L D Y G L A FD + E I W MI A L
Sbjct: 115 LGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGL 174
Query: 468 YCRMQMEGILPNELTMASVLRAC-SSLAALEQGKQIHARTIKYGFNLEVPIGSALSTMYA 527
+ RM E + PNE T + VL AC A + +QIHAR + G + + L +Y+
Sbjct: 175 FVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYS 234
Query: 528 KCGSLEDGNLVFRRMPTRDILSWNAMISGLSQNGEGFKALELFEEMRQGTTKPDYVTFVN 587
+ G ++ VF + +D SW AMISGLS+N +A+ LF +M P F +
Sbjct: 235 RNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSS 294
Query: 588 ILSACSHMGLVERGK 601
+LSAC + +E G+
Sbjct: 295 VLSACKKIESLEIGE 308
BLAST of ClCG08G013940 vs. Swiss-Prot
Match:
PP172_ARATH (Pentatricopeptide repeat-containing protein At2g27610 OS=Arabidopsis thaliana GN=PCMP-H60 PE=2 SV=1)
HSP 1 Score: 456.1 bits (1172), Expect = 7.8e-127
Identity = 251/675 (37.19%), Postives = 390/675 (57.78%), Query Frame = 1
Query: 92 GKAIHAQLLRTGSFSSVYLTNSLVNLYAKCGSLVKAKLVFESITNKDVVSWNCLINAYSQ 151
G+ +H Q ++ G V + SLV+ Y K + + VF+ + ++VV+W LI+ Y++
Sbjct: 112 GRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYAR 171
Query: 152 QGPVGCSFVMELFQRMRAENTLPNAHTFAGVFTAASSSLETFGGLQAHALAIKTSSFYDV 211
V+ LF RM+ E T PN+ TFA + GLQ H + +K +
Sbjct: 172 NSMN--DEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTI 231
Query: 212 FVGSSLLNMYCKIGCLLDARKVFDRIPERNSVSWSTMISGYAMERMASEAWELFLLLRRE 271
V +SL+N+Y K G + AR +FD+ ++ V+W++MISGYA + EA +F +R
Sbjct: 232 PVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLN 291
Query: 272 EGIHNEFIYTGVLSALTVPELVHYGKQIHCLAFKNGLLSIVSVGNALVTMYGKCGCLDDA 331
+E + V+ + + + +Q+HC K G L ++ AL+ Y KC + DA
Sbjct: 292 YVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDA 351
Query: 332 LKTFEFSGDK-NSITWSAMITGYAQAGDSHEALKLFSYMHFNGNKPSEFTFVGVINACSD 391
L+ F+ G N ++W+AMI+G+ Q EA+ LFS M G +P+EFT+ ++ A
Sbjct: 352 LRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPV 411
Query: 392 IGALKEGKQMHGYSLKMGYESQIYIMTALVDMYAKCGSLVDARNGFDYLKEPDIVLWTSM 451
I ++H +K YE + TAL+D Y K G + +A F + + DIV W++M
Sbjct: 412 ISP----SEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAM 471
Query: 452 IGGYAQNGENETALTLYCRMQMEGILPNELTMASVLRACSSL-AALEQGKQIHARTIKYG 511
+ GYAQ GE E A+ ++ + GI PNE T +S+L C++ A++ QGKQ H IK
Sbjct: 472 LAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSR 531
Query: 512 FNLEVPIGSALSTMYAKCGSLEDGNLVFRRMPTRDILSWNAMISGLSQNGEGFKALELFE 571
+ + + SAL TMYAK G++E VF+R +D++SWN+MISG +Q+G+ KAL++F+
Sbjct: 532 LDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFK 591
Query: 572 EMRQGTTKPDYVTFVNILSACSHMGLVERGKVYFKMMRDEFGIVPRVEHYACMVDILSRA 631
EM++ K D VTF+ + +AC+H GLVE G+ YF +M + I P EH +CMVD+ SRA
Sbjct: 592 EMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRA 651
Query: 632 GKLQEAKEFIESVTIDHGMYLWRILLGACRNYRNYELGAYAGEKLMELGSEESSAYVLLS 691
G+L++A + IE++ G +WR +L ACR ++ ELG A EK++ + E+S+AYVLLS
Sbjct: 652 GQLEKAMKVIENMPNPAGSTIWRTILAACRVHKKTELGRLAAEKIIAMKPEDSAAYVLLS 711
Query: 692 SIYAALGRSDDVERVRRVMKLRGVNKDPGCSWIELKSQVHVFVVGDQIHPQIVNIRSELR 751
++YA G + +VR++M R V K+PG SWIE+K++ + F+ GD+ HP I +L
Sbjct: 712 NMYAESGDWQERAKVRKLMNERNVKKEPGYSWIEVKNKTYSFLAGDRSHPLKDQIYMKLE 771
Query: 752 RLRKHMKDECYESPD 765
L +KD YE PD
Sbjct: 772 DLSTRLKDLGYE-PD 779
HSP 2 Score: 263.1 bits (671), Expect = 9.7e-69
Identity = 164/520 (31.54%), Postives = 270/520 (51.92%), Query Frame = 1
Query: 124 LVKAKLVFESITNKDVVSWNCLINAYSQQGPVGCSFVMELFQRMRAENTLPNAHTFAGVF 183
L A +F+ +D S+ L+ +S+ G LF + + F+ V
Sbjct: 43 LYNAHNLFDKSPGRDRESYISLLFGFSRDGRT--QEAKRLFLNIHRLGMEMDCSIFSSVL 102
Query: 184 TAASSSLETFGGLQAHALAIKTSSFYDVFVGSSLLNMYCKIGCLLDARKVFDRIPERNSV 243
+++ + G Q H IK DV VG+SL++ Y K D RKVFD + ERN V
Sbjct: 103 KVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVV 162
Query: 244 SWSTMISGYAMERMASEAWELFLLLRREEGIHNEFIYTGVLSALTVPELVHYGKQIHCLA 303
+W+T+ISGYA M E LF+ ++ E N F + L L + G Q+H +
Sbjct: 163 TWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVV 222
Query: 304 FKNGLLSIVSVGNALVTMYGKCGCLDDALKTFEFSGDKNSITWSAMITGYAQAGDSHEAL 363
KNGL + V N+L+ +Y KCG + A F+ + K+ +TW++MI+GYA G EAL
Sbjct: 223 VKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEAL 282
Query: 364 KLFSYMHFNGNKPSEFTFVGVINACSDIGALKEGKQMHGYSLKMGYESQIYIMTALVDMY 423
+F M N + SE +F VI C+++ L+ +Q+H +K G+ I TAL+ Y
Sbjct: 283 GMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAY 342
Query: 424 AKCGSLVDARNGFDYLK-EPDIVLWTSMIGGYAQNGENETALTLYCRMQMEGILPNELTM 483
+KC +++DA F + ++V WT+MI G+ QN E A+ L+ M+ +G+ PNE T
Sbjct: 343 SKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTY 402
Query: 484 ASVLRACSSLAALEQGKQIHARTIKYGFNLEVPIGSALSTMYAKCGSLEDGNLVFRRMPT 543
+ +L A ++ E +HA+ +K + +G+AL Y K G +E+ VF +
Sbjct: 403 SVILTALPVISPSE----VHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDD 462
Query: 544 RDILSWNAMISGLSQNGEGFKALELFEEMRQGTTKPDYVTFVNILSACSHMGL-VERGKV 603
+DI++W+AM++G +Q GE A+++F E+ +G KP+ TF +IL+ C+ + +GK
Sbjct: 463 KDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQ 522
Query: 604 YFKMMRDEFGIVPRVEHYAC----MVDILSRAGKLQEAKE 638
+ F I R++ C ++ + ++ G ++ A+E
Sbjct: 523 F-----HGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEE 551
HSP 3 Score: 92.8 bits (229), Expect = 1.7e-17
Identity = 64/257 (24.90%), Postives = 128/257 (49.81%), Query Frame = 1
Query: 429 LVDARNGFDYLKEPDIVLWTSMIGGYAQNGENETALTLYCRMQMEGILPNELTMASVLRA 488
L +A N FD D + S++ G++++G + A L+ + G+ + +SVL+
Sbjct: 43 LYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKV 102
Query: 489 CSSLAALEQGKQIHARTIKYGFNLEVPIGSALSTMYAKCGSLEDGNLVFRRMPTRDILSW 548
++L G+Q+H + IK+GF +V +G++L Y K + +DG VF M R++++W
Sbjct: 103 SATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTW 162
Query: 549 NAMISGLSQNGEGFKALELFEEMRQGTTKPDYVTFVNILSACSHMGLVERG-KVYFKMMR 608
+ISG ++N + L LF M+ T+P+ TF L + G+ RG +V+ +++
Sbjct: 163 TTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVK 222
Query: 609 DEFGIVPRVEHYACMVDILSRAGKLQEAKEFIESVTIDHGMYLWRILLGACRNYRNYE-L 668
+ G+ + ++++ + G +++A+ + + + ++ G N + E L
Sbjct: 223 N--GLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEAL 282
Query: 669 GAYAGEKLMELGSEESS 684
G + +L + ESS
Sbjct: 283 GMFYSMRLNYVRLSESS 297
BLAST of ClCG08G013940 vs. Swiss-Prot
Match:
PP151_ARATH (Pentatricopeptide repeat-containing protein At2g13600 OS=Arabidopsis thaliana GN=PCMP-E76 PE=3 SV=1)
HSP 1 Score: 450.7 bits (1158), Expect = 3.3e-125
Identity = 234/587 (39.86%), Postives = 347/587 (59.11%), Query Frame = 1
Query: 210 DVFVGSSLLNMYCKIGCLLDARKVFDRIPERNSVSWSTMISGYAMERMASEAWELFLLLR 269
+++ +S++ K+G L +A +F +PER+ +W++M+SG+A EA F ++
Sbjct: 85 NIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMH 144
Query: 270 REEGIHNEFIYTGVLSALTVPELVHYGKQIHCLAFKNGLLSIVSVGNALVTMYGKCGCLD 329
+E + NE+ + VLSA + ++ G Q+H L K+ LS V +G+ALV MY KCG ++
Sbjct: 145 KEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVN 204
Query: 330 DALKTFEFSGDKNSITWSAMITGYAQAGDSHEALKLFSYMHFNGNKPSEFTFVGVINACS 389
DA + F+ GD+N ++W+++IT + Q G + EAL +F M + +P E T VI+AC+
Sbjct: 205 DAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACA 264
Query: 390 DIGALKEGKQMHGYSLKMG-YESQIYIMTALVDMYAKCGSLVDARNGFD----------- 449
+ A+K G+++HG +K + I + A VDMYAKC + +AR FD
Sbjct: 265 SLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAET 324
Query: 450 --------------------YLKEPDIVLWTSMIGGYAQNGENETALTLYCRMQMEGILP 509
+ E ++V W ++I GY QNGENE AL+L+C ++ E + P
Sbjct: 325 SMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCP 384
Query: 510 NELTMASVLRACSSLAALEQGKQIHARTIKYGFNL------EVPIGSALSTMYAKCGSLE 569
+ A++L+AC+ LA L G Q H +K+GF ++ +G++L MY KCG +E
Sbjct: 385 THYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVE 444
Query: 570 DGNLVFRRMPTRDILSWNAMISGLSQNGEGFKALELFEEMRQGTTKPDYVTFVNILSACS 629
+G LVFR+M RD +SWNAMI G +QNG G +ALELF EM + KPD++T + +LSAC
Sbjct: 445 EGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACG 504
Query: 630 HMGLVERGKVYFKMMRDEFGIVPRVEHYACMVDILSRAGKLQEAKEFIESVTIDHGMYLW 689
H G VE G+ YF M +FG+ P +HY CMVD+L RAG L+EAK IE + + +W
Sbjct: 505 HAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIW 564
Query: 690 RILLGACRNYRNYELGAYAGEKLMELGSEESSAYVLLSSIYAALGRSDDVERVRRVMKLR 749
LL AC+ +RN LG Y EKL+E+ S YVLLS++YA LG+ +DV VR+ M+
Sbjct: 565 GSLLAACKVHRNITLGKYVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDVMNVRKSMRKE 624
Query: 750 GVNKDPGCSWIELKSQVHVFVVGDQIHPQIVNIRSELRRLRKHMKDE 759
GV K PGCSWI+++ HVF+V D+ HP+ I S L L M+ E
Sbjct: 625 GVTKQPGCSWIKIQGHDHVFMVKDKSHPRKKQIHSLLDILIAEMRPE 671
HSP 2 Score: 228.4 bits (581), Expect = 2.7e-58
Identity = 142/487 (29.16%), Postives = 240/487 (49.28%), Query Frame = 1
Query: 107 SVYLTNSLVNLYAKCGSLVKAKLVFESITNKDVVSWNCLINAYSQQGPVGCSFVMELFQR 166
++Y NS+V K G L +A +F S+ +D +WN +++ ++Q C + F
Sbjct: 85 NIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDR--CEEALCYFAM 144
Query: 167 MRAENTLPNAHTFAGVFTAASSSLETFGGLQAHALAIKTSSFYDVFVGSSLLNMYCKIGC 226
M E + N ++FA V +A S + G+Q H+L K+ DV++GS+L++MY K G
Sbjct: 145 MHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGN 204
Query: 227 LLDARKVFDRIPERNSVSWSTMISGYAMERMASEAWELFLLLRREEGIHNEFIYTGVLSA 286
+ DA++VFD + +RN VSW+++I+ + A EA ++F ++ +E V+SA
Sbjct: 205 VNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISA 264
Query: 287 LTVPELVHYGKQIHCLAFKNGLL-SIVSVGNALVTMYGKCGCLDDA-------------L 346
+ G+++H KN L + + + NA V MY KC + +A
Sbjct: 265 CASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIA 324
Query: 347 KTFEFSG------------------DKNSITWSAMITGYAQAGDSHEALKLFSYMHFNGN 406
+T SG ++N ++W+A+I GY Q G++ EAL LF +
Sbjct: 325 ETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESV 384
Query: 407 KPSEFTFVGVINACSDIGALKEGKQMHGYSLKMGY------ESQIYIMTALVDMYAKCGS 466
P+ ++F ++ AC+D+ L G Q H + LK G+ E I++ +L+DMY KCG
Sbjct: 385 CPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGC 444
Query: 467 LVDARNGFDYLKEPDIVLWTSMIGGYAQNGENETALTLYCRMQMEGILPNELTMASVLRA 526
+ + F + E D V W +MI G+AQNG AL L+ M G P+ +TM VL A
Sbjct: 445 VEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSA 504
Query: 527 CSSLAALEQGKQ-IHARTIKYGFNLEVPIGSALSTMYAKCGSLEDGNLVFRRMPTR-DIL 554
C +E+G+ + T +G + + + + G LE+ + MP + D +
Sbjct: 505 CGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSV 564
HSP 3 Score: 177.6 bits (449), Expect = 5.4e-43
Identity = 99/305 (32.46%), Postives = 171/305 (56.07%), Query Frame = 1
Query: 271 EEGIHNE-FIYTGVLSALTVPELVHYGKQIHCLAFKNGLLSIVSVGNALVTMYGKCGCLD 330
+ G NE FI ++ A + + G+Q+ F + N++VT K G LD
Sbjct: 48 KSGFSNEIFIQNRLIDAYSKCGSLEDGRQV----FDKMPQRNIYTWNSVVTGLTKLGFLD 107
Query: 331 DALKTFEFSGDKNSITWSAMITGYAQAGDSHEALKLFSYMHFNGNKPSEFTFVGVINACS 390
+A F +++ TW++M++G+AQ EAL F+ MH G +E++F V++ACS
Sbjct: 108 EADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSACS 167
Query: 391 DIGALKEGKQMHGYSLKMGYESQIYIMTALVDMYAKCGSLVDARNGFDYLKEPDIVLWTS 450
+ + +G Q+H K + S +YI +ALVDMY+KCG++ DA+ FD + + ++V W S
Sbjct: 168 GLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNS 227
Query: 451 MIGGYAQNGENETALTLYCRMQMEGILPNELTMASVLRACSSLAALEQGKQIHARTIKYG 510
+I + QNG AL ++ M + P+E+T+ASV+ AC+SL+A++ G+++H R +K
Sbjct: 228 LITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKND 287
Query: 511 -FNLEVPIGSALSTMYAKCGSLEDGNLVFRRMPTRDILSWNAMISGLSQNGEGFKALELF 570
++ + +A MYAKC +++ +F MP R++++ +MISG + A +F
Sbjct: 288 KLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMF 347
Query: 571 EEMRQ 574
+M +
Sbjct: 348 TKMAE 348
HSP 4 Score: 75.9 bits (185), Expect = 2.2e-12
Identity = 48/129 (37.21%), Postives = 72/129 (55.81%), Query Frame = 1
Query: 483 ASVLRAC--SSLAALEQGKQIHARTIKYGFNLEVPIGSALSTMYAKCGSLEDGNLVFRRM 542
A +L +C S L+A+ + +HA IK GF+ E+ I + L Y+KCGSLEDG VF +M
Sbjct: 23 AKLLDSCIKSKLSAIYV-RYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKM 82
Query: 543 PTRDILSWNAMISGLSQNGEGFKALELFEEMRQGTTKPDYVTFVNILSACSHMGLVERGK 602
P R+I +WN++++GL++ G +A LF M + D T+ +++S + E
Sbjct: 83 PQRNIYTWNSVVTGLTKLGFLDEADSLFRSM----PERDQCTWNSMVSGFAQHDRCEEAL 142
Query: 603 VYFKMMRDE 610
YF MM E
Sbjct: 143 CYFAMMHKE 146
BLAST of ClCG08G013940 vs. TrEMBL
Match:
A0A0A0LK41_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G348180 PE=4 SV=1)
HSP 1 Score: 1315.8 bits (3404), Expect = 0.0e+00
Identity = 658/758 (86.81%), Postives = 699/758 (92.22%), Query Frame = 1
Query: 23 KAGPIIELGLKVVDERW----PSPITNGKFPNWLRC---ASFGIEAELMNLPLVLPQHRS 82
+AGPII GLK + W P+PITNGK + L+ ASFGI+AELMNL L+ PQHRS
Sbjct: 41 QAGPIIVFGLK---DEWTKVGPNPITNGKILSSLQVRLRASFGIQAELMNLYLLPPQHRS 100
Query: 83 FFNLLLRYTHQKDLQKGKAIHAQLLRTGSFSSVYLTNSLVNLYAKCGSLVKAKLVFESIT 142
F +LLLR T QKDLQKGKAIHAQLLRTGSFSSVYLTNSLVNLYAKCGS+VKAKLVFESIT
Sbjct: 101 FVDLLLRCTRQKDLQKGKAIHAQLLRTGSFSSVYLTNSLVNLYAKCGSIVKAKLVFESIT 160
Query: 143 NKDVVSWNCLINAYSQQGPVGCSFVMELFQRMRAENTLPNAHTFAGVFTAASSSLETFGG 202
NKDVVSWNCLIN YSQ+G VG SFVMELFQRMRAENTLPN HTF+GVFTAASSS ETFGG
Sbjct: 161 NKDVVSWNCLINGYSQKGTVGYSFVMELFQRMRAENTLPNGHTFSGVFTAASSSPETFGG 220
Query: 203 LQAHALAIKTSSFYDVFVGSSLLNMYCKIGCLLDARKVFDRIPERNSVSWSTMISGYAME 262
LQAHALAIKTS+FYDVFVGSSL+NMYCKIGC+LDARKVFD IPERN+VSW+T+ISGYAME
Sbjct: 221 LQAHALAIKTSNFYDVFVGSSLINMYCKIGCMLDARKVFDTIPERNTVSWATIISGYAME 280
Query: 263 RMASEAWELFLLLRREEGIHNEFIYTGVLSALTVPELVHYGKQIHCLAFKNGLLSIVSVG 322
RMA EAWELFLL+RREEG H++FIYT VLSALTVP+LVHYGKQIHCLA KNGLLSI SVG
Sbjct: 281 RMAFEAWELFLLMRREEGAHDKFIYTSVLSALTVPDLVHYGKQIHCLALKNGLLSIASVG 340
Query: 323 NALVTMYGKCGCLDDALKTFEFSGDKNSITWSAMITGYAQAGDSHEALKLFSYMHFNGNK 382
NALVTMYGKCGCLDDA KTFE SGDK+ ITWSAMITGYAQAGDSHEAL LF MH NGNK
Sbjct: 341 NALVTMYGKCGCLDDAFKTFELSGDKDDITWSAMITGYAQAGDSHEALNLFYNMHLNGNK 400
Query: 383 PSEFTFVGVINACSDIGALKEGKQMHGYSLKMGYESQIYIMTALVDMYAKCGSLVDARNG 442
PSEFTFVGVINACSDIGAL+EGKQ+HGYSLK GYE QIY MTALVDMYAKCGSLVDAR G
Sbjct: 401 PSEFTFVGVINACSDIGALEEGKQIHGYSLKAGYECQIYFMTALVDMYAKCGSLVDARKG 460
Query: 443 FDYLKEPDIVLWTSMIGGYAQNGENETALTLYCRMQMEGILPNELTMASVLRACSSLAAL 502
FDYLKEPDIVLWTSMI GYAQNGENETALTLYCRMQME I+P+ELTMASVLRACSSLAAL
Sbjct: 461 FDYLKEPDIVLWTSMISGYAQNGENETALTLYCRMQMERIMPHELTMASVLRACSSLAAL 520
Query: 503 EQGKQIHARTIKYGFNLEVPIGSALSTMYAKCGSLEDGNLVFRRMPTRDILSWNAMISGL 562
EQGKQIHA+TIKYGF+LEVPIGSALSTMYAKCGSLEDGNLVFRRMP+RDI++WNAMISGL
Sbjct: 521 EQGKQIHAQTIKYGFSLEVPIGSALSTMYAKCGSLEDGNLVFRRMPSRDIMTWNAMISGL 580
Query: 563 SQNGEGFKALELFEEMRQGTTKPDYVTFVNILSACSHMGLVERGKVYFKMMRDEFGIVPR 622
SQNGEG KALELFEE+R GTTKPDYVTFVN+LSACSHMGLVERGKVYF+MM DEFGI+PR
Sbjct: 581 SQNGEGLKALELFEELRHGTTKPDYVTFVNVLSACSHMGLVERGKVYFRMMLDEFGIIPR 640
Query: 623 VEHYACMVDILSRAGKLQEAKEFIESVTIDHGMYLWRILLGACRNYRNYELGAYAGEKLM 682
VEHYACMVDILSRAGKL E KEFIES TIDHGM LWRILLGACRNYRNYELGAYAGEKLM
Sbjct: 641 VEHYACMVDILSRAGKLHETKEFIESATIDHGMCLWRILLGACRNYRNYELGAYAGEKLM 700
Query: 683 ELGSEESSAYVLLSSIYAALGRSDDVERVRRVMKLRGVNKDPGCSWIELKSQVHVFVVGD 742
ELGS+ESSAY+LLSSIY ALGRSDDVERVRR+MKLRGVNK+PGCSWIELKSQVHVFVVGD
Sbjct: 701 ELGSQESSAYILLSSIYTALGRSDDVERVRRLMKLRGVNKEPGCSWIELKSQVHVFVVGD 760
Query: 743 QIHPQIVNIRSELRRLRKHMKDECYESPDDTNTMPLYI 774
QIHPQIV I SELRRLR HMKDECYES +DTN+M LYI
Sbjct: 761 QIHPQIVKICSELRRLRDHMKDECYESFNDTNSMTLYI 795
BLAST of ClCG08G013940 vs. TrEMBL
Match:
E0CQU2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0001g00570 PE=4 SV=1)
HSP 1 Score: 1081.2 bits (2795), Expect = 0.0e+00
Identity = 542/699 (77.54%), Postives = 607/699 (86.84%), Query Frame = 1
Query: 68 LVLPQHRSFFNLLLRYTHQKDLQKGKAIHAQLLRTGSFSSVYLTNSLVNLYAKCGSLVKA 127
+ LP +RSFF LL+YTH + LQKGKA+HAQ++++ S S VY+ NSLVNLYAKC L +A
Sbjct: 1 MTLPSNRSFFTALLQYTHNRSLQKGKALHAQIIKSSS-SCVYIANSLVNLYAKCQRLREA 60
Query: 128 KLVFESITNKDVVSWNCLINAYSQQGPVGCSFVMELFQRMRAENTLPNAHTFAGVFTAAS 187
K VFE I NKDVVSWNC+IN YSQ GP G S VMELFQRMRAENT PNAHTFAGVFTAAS
Sbjct: 61 KFVFERIQNKDVVSWNCIINGYSQHGPSGSSHVMELFQRMRAENTAPNAHTFAGVFTAAS 120
Query: 188 SSLETFGGLQAHALAIKTSSFYDVFVGSSLLNMYCKIGCLLDARKVFDRIPERNSVSWST 247
+ ++ GG AHA+AIK S DVFVGSSL+NMYCK G +ARKVFD +PERNSVSW+T
Sbjct: 121 TLVDAAGGRLAHAVAIKMDSCRDVFVGSSLMNMYCKAGLTPEARKVFDTMPERNSVSWAT 180
Query: 248 MISGYAMERMASEAWELFLLLRREEGIHNEFIYTGVLSALTVPELVHYGKQIHCLAFKNG 307
MISGYA +++A+EA LF L+RREE NEF++T VLSALT+PELV+ GKQIHC+A KNG
Sbjct: 181 MISGYASQKLAAEALGLFRLMRREEEGENEFVFTSVLSALTLPELVNNGKQIHCIAVKNG 240
Query: 308 LLSIVSVGNALVTMYGKCGCLDDALKTFEFSGDKNSITWSAMITGYAQAGDSHEALKLFS 367
LLSIVSVGNALVTMY KCG LDDAL+TFE S DKNSITWSAMITGYAQ+GDS +ALKLFS
Sbjct: 241 LLSIVSVGNALVTMYAKCGSLDDALQTFETSSDKNSITWSAMITGYAQSGDSDKALKLFS 300
Query: 368 YMHFNGNKPSEFTFVGVINACSDIGALKEGKQMHGYSLKMGYESQIYIMTALVDMYAKCG 427
MH +G +PSEFTFVGVINACSD+GA EGKQ+H Y LK+G+ESQIY+MTALVDMYAKC
Sbjct: 301 SMHLSGIRPSEFTFVGVINACSDLGAAWEGKQVHDYLLKLGFESQIYVMTALVDMYAKCS 360
Query: 428 SLVDARNGFDYLKEPDIVLWTSMIGGYAQNGENETALTLYCRMQMEGILPNELTMASVLR 487
S+VDAR GFDYL+EPDIVLWTSMIGGY QNGENE AL+LY RM+MEGILPNELTMASVL+
Sbjct: 361 SIVDARKGFDYLQEPDIVLWTSMIGGYVQNGENEDALSLYGRMEMEGILPNELTMASVLK 420
Query: 488 ACSSLAALEQGKQIHARTIKYGFNLEVPIGSALSTMYAKCGSLEDGNLVFRRMPTRDILS 547
ACSSLAALEQGKQIHART+KYGF LEVPIGSALSTMYAKCG L+DG LVFRRMP RD++S
Sbjct: 421 ACSSLAALEQGKQIHARTVKYGFGLEVPIGSALSTMYAKCGCLKDGTLVFRRMPARDVIS 480
Query: 548 WNAMISGLSQNGEGFKALELFEEMRQGTTKPDYVTFVNILSACSHMGLVERGKVYFKMMR 607
WNAMISGLSQNG G +ALELFEEM+ TKPDYVTFVNILSACSHMGLVERG YF+MM
Sbjct: 481 WNAMISGLSQNGCGKEALELFEEMQLEGTKPDYVTFVNILSACSHMGLVERGWGYFRMMF 540
Query: 608 DEFGIVPRVEHYACMVDILSRAGKLQEAKEFIESVTIDHGMYLWRILLGACRNYRNYELG 667
DEFG+ PRVEHYACMVDILSRAGKL+EA EF ES TIDHGM LWRI+LGACRNYRNYELG
Sbjct: 541 DEFGMDPRVEHYACMVDILSRAGKLKEAIEFTESATIDHGMCLWRIILGACRNYRNYELG 600
Query: 668 AYAGEKLMELGSEESSAYVLLSSIYAALGRSDDVERVRRVMKLRGVNKDPGCSWIELKSQ 727
AYAGEKLMELGS+ESSAYVLLSSIY+ALGR +DVERVRR+MKLRGV+K+PGCSWIELKS
Sbjct: 601 AYAGEKLMELGSQESSAYVLLSSIYSALGRWEDVERVRRMMKLRGVSKEPGCSWIELKSG 660
Query: 728 VHVFVVGDQIHPQIVNIRSELRRLRKHMKDECYESPDDT 767
VHVFVV DQ+HPQI +I ELR+L K MKDE YE D+
Sbjct: 661 VHVFVVKDQMHPQIGDIHVELRQLSKQMKDEGYEPATDS 698
BLAST of ClCG08G013940 vs. TrEMBL
Match:
A0A067KKT6_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_08147 PE=4 SV=1)
HSP 1 Score: 1056.2 bits (2730), Expect = 1.9e-305
Identity = 517/701 (73.75%), Postives = 598/701 (85.31%), Query Frame = 1
Query: 71 PQHRSFFNLLLRYTHQKDLQKGKAIHAQLLRTGSFSSVYLTNSLVNLYAKCGSLVKAKLV 130
PQ RS FN +L THQK LQ+G+A+H Q++++ S S +YL NSLVN YAKCG+L KAKLV
Sbjct: 5 PQSRSLFNSILECTHQKSLQRGRALHGQIIKSASSSCIYLANSLVNFYAKCGNLPKAKLV 64
Query: 131 FESITNKDVVSWNCLINAYSQQGPVGCSFVMELFQRMRAENTLPNAHTFAGVFTAASSSL 190
FE I +KDV+SWNCLIN+YSQQGP G S VMELF+ MRAENT PNAHTFAGVFTAAS+
Sbjct: 65 FERIRDKDVISWNCLINSYSQQGPAGYSLVMELFKSMRAENTFPNAHTFAGVFTAASNLS 124
Query: 191 ETFGGLQAHALAIKTSSFYDVFVGSSLLNMYCKIGCLLDARKVFDRIPERNSVSWSTMIS 250
F G QA ALAI+T SFYDVFVGSSLLNMYCK G LL+ARKVFD +PERNSV+W+TMIS
Sbjct: 125 SVFCGQQAQALAIRTVSFYDVFVGSSLLNMYCKAGLLLEARKVFDEMPERNSVTWATMIS 184
Query: 251 GYAMERMASEAWELFLLLRREEGIHNEFIYTGVLSALTVPELVHYGKQIHCLAFKNGLLS 310
GYA++R+A EA +F L+RRE+ NEF++T LSAL +P+ + GKQIHCLA KNGLL+
Sbjct: 185 GYAIQRLAGEALGIFELMRREDEGLNEFVFTSALSALAIPDFIDSGKQIHCLAVKNGLLA 244
Query: 311 IVSVGNALVTMYGKCGCLDDALKTFEFSGDKNSITWSAMITGYAQAGDSHEALKLFSYMH 370
VSV NALVTMY KCG LDD+L+ FE S DK+SITWSAMITGYAQ+GDSH+ALKLFS MH
Sbjct: 245 FVSVLNALVTMYAKCGGLDDSLQVFEMSSDKDSITWSAMITGYAQSGDSHKALKLFSRMH 304
Query: 371 FNGNKPSEFTFVGVINACSDIGALKEGKQMHGYSLKMGYESQIYIMTALVDMYAKCGSLV 430
F G PSEFT VGV+NACSDIGA++EGKQ+H Y +K+G+E Q+YIMTALVDMYAKCG
Sbjct: 305 FAGINPSEFTLVGVLNACSDIGAVEEGKQVHNYLVKLGFEFQMYIMTALVDMYAKCGCTA 364
Query: 431 DARNGFDYLKEPDIVLWTSMIGGYAQNGENETALTLYCRMQMEGILPNELTMASVLRACS 490
DA GF+YL+EPDI+LWTSMI GY QNGENE AL+LYC+MQM+G+LPNELTMASVL+ACS
Sbjct: 365 DAWKGFNYLQEPDIILWTSMIAGYVQNGENEDALSLYCKMQMQGVLPNELTMASVLKACS 424
Query: 491 SLAALEQGKQIHARTIKYGFNLEVPIGSALSTMYAKCGSLEDGNLVFRRMPTRDILSWNA 550
SLAAL+QG+QIHARTIKYG +L VPIGSALSTMYAKCGSLE+G LVFRRMP RD++SWNA
Sbjct: 425 SLAALDQGRQIHARTIKYGLSLAVPIGSALSTMYAKCGSLEEGTLVFRRMPERDVVSWNA 484
Query: 551 MISGLSQNGEGFKALELFEEMRQGTTKPDYVTFVNILSACSHMGLVERGKVYFKMMRDEF 610
MISG+SQNG G +ALELFEEMR+ TKPD VTFVN+LSACSHMGLVERG VYFKMM DEF
Sbjct: 485 MISGVSQNGYGREALELFEEMRREGTKPDDVTFVNVLSACSHMGLVERGWVYFKMMLDEF 544
Query: 611 GIVPRVEHYACMVDILSRAGKLQEAKEFIESVTIDHGMYLWRILLGACRNYRNYELGAYA 670
GIVP VEHYACMVD+LSRAG L EAKEFIES +DHG+ LWRILLGACRNY NYELGAYA
Sbjct: 545 GIVPGVEHYACMVDVLSRAGNLSEAKEFIESAKVDHGLCLWRILLGACRNYHNYELGAYA 604
Query: 671 GEKLMELGSEESSAYVLLSSIYAALGRSDDVERVRRVMKLRGVNKDPGCSWIELKSQVHV 730
GEKLMELGS+ESSAYVLLSSIY AL R +DVER+R +M++RGV+K+PGCSWIELKS VHV
Sbjct: 605 GEKLMELGSQESSAYVLLSSIYTALNRPEDVERIRSMMRIRGVSKEPGCSWIELKSCVHV 664
Query: 731 FVVGDQIHPQIVNIRSELRRLRKHMKDECYESPDDTNTMPL 772
FVVGDQ+HPQI IR+E+RRL K MKD+ D+ ++ L
Sbjct: 665 FVVGDQMHPQIGEIRAEIRRLSKQMKDKGCRPDSDSASITL 705
BLAST of ClCG08G013940 vs. TrEMBL
Match:
A0A061EFJ3_THECC (Tetratricopeptide repeat-like superfamily protein OS=Theobroma cacao GN=TCM_011013 PE=4 SV=1)
HSP 1 Score: 1056.2 bits (2730), Expect = 1.9e-305
Identity = 522/706 (73.94%), Postives = 605/706 (85.69%), Query Frame = 1
Query: 68 LVLPQHRSFFNLLLRYTHQKDLQKGKAIHAQLLRTGSFSS-VYLTNSLVNLYAKCGSLVK 127
+ LP++RSFF+ L++ T QK+L +G+A+HA+++R+G SS VYL+NSLVN YAKCG L K
Sbjct: 1 MTLPRYRSFFSELVQITKQKNLSRGRAVHARIIRSGGSSSCVYLSNSLVNFYAKCGDLSK 60
Query: 128 AKLVFESITNKDVVSWNCLINAYSQQGPVGCSFVMELFQRMRAENTLPNAHTFAGVFTAA 187
AK VFE+I +KDVVSWNCLIN YSQQGP +FVM+LFQRMRAEN LPNAHTFAGVFTAA
Sbjct: 61 AKCVFENIQHKDVVSWNCLINGYSQQGPTASTFVMQLFQRMRAENYLPNAHTFAGVFTAA 120
Query: 188 SSSLETFGGLQAHALAIKTSSFYDVFVGSSLLNMYCKIGCLLDARKVFDRIPERNSVSWS 247
S+ + F G QAH+LAIKT SF DVFVGSSLLN+YCK G L +ARKVFD +P++NSVSW+
Sbjct: 121 SNLSDVFSGQQAHSLAIKTDSFDDVFVGSSLLNVYCKSGVLAEARKVFDEMPKKNSVSWA 180
Query: 248 TMISGYAMERMASEAWELFLLLRREEGIHNEFIYTGVLSALTVPELVHYGKQIHCLAFKN 307
TMISGYAM+R A +A+ELF L+R+EE NE+ + VLSAL PE ++ G+QIHC K+
Sbjct: 181 TMISGYAMQRSALDAFELFELMRQEEEKVNEYAMSSVLSALADPEFLNTGRQIHCFTVKH 240
Query: 308 GLLSIVSVGNALVTMYGKCGCLDDALKTFEFSGDKNSITWSAMITGYAQAGDSHEALKLF 367
GLL SVGNALVTMY KCG LDDALKTFE SG+KNSITWSAMITGYAQ+GDS +ALKLF
Sbjct: 241 GLLVFSSVGNALVTMYAKCGSLDDALKTFELSGNKNSITWSAMITGYAQSGDSLKALKLF 300
Query: 368 SYMHFNGNKPSEFTFVGVINACSDIGALKEGKQMHGYSLKMGYESQIYIMTALVDMYAKC 427
S MHF G PSEFT VGV+NACSD GA+++GKQ+HGY LK+GYESQ+YIMTALVDMYAKC
Sbjct: 301 SSMHFAGIMPSEFTLVGVLNACSDTGAVEDGKQVHGYLLKLGYESQVYIMTALVDMYAKC 360
Query: 428 GSLVDARNGFDYLKEPDIVLWTSMIGGYAQNGENETALTLYCRMQMEGILPNELTMASVL 487
G + AR GFDYL+EPD+VLWTSMIGGY QNGENE A+ LY RMQ+EGI+PNELTMAS+L
Sbjct: 361 GCTLAARKGFDYLQEPDMVLWTSMIGGYVQNGENENAMLLYGRMQIEGIVPNELTMASIL 420
Query: 488 RACSSLAALEQGKQIHARTIKYGFNLEVPIGSALSTMYAKCGSLEDGNLVFRRMPTRDIL 547
+ACSSLAALEQGKQIHA TIK+GF LEVPIGSALSTMYAKCG+LEDGNLVFRRMP RD++
Sbjct: 421 KACSSLAALEQGKQIHACTIKHGFGLEVPIGSALSTMYAKCGNLEDGNLVFRRMPRRDVV 480
Query: 548 SWNAMISGLSQNGEGFKALELFEEMRQGTTKPDYVTFVNILSACSHMGLVERGKVYFKMM 607
SWN+MISGL+QNG G +ALELFEEM T+PDYVTFVNILSACSH+GLVERG YF MM
Sbjct: 481 SWNSMISGLAQNGHGNEALELFEEMLSEGTEPDYVTFVNILSACSHIGLVERGWAYFNMM 540
Query: 608 RDEFGIVPRVEHYACMVDILSRAGKLQEAKEFIESVTIDHGMYLWRILLGACRNYRNYEL 667
D+FGIVPRVEH+ACMVD+L RAGKL EAKEFIES TIDHGMYLWRILL ACRN+RNYEL
Sbjct: 541 SDKFGIVPRVEHHACMVDMLGRAGKLDEAKEFIESATIDHGMYLWRILLSACRNFRNYEL 600
Query: 668 GAYAGEKLMELGSEESSAYVLLSSIYAALGRSDDVERVRRVMKLRGVNKDPGCSWIELKS 727
GAYAGEKLMELGS+ESSAYVLLSSIYAALGR +DVERVRR+M+LRGVNK+PGCSWIELK
Sbjct: 601 GAYAGEKLMELGSQESSAYVLLSSIYAALGRLEDVERVRRMMRLRGVNKEPGCSWIELKG 660
Query: 728 QVHVFVVGDQIHPQIVNIRSELRRLRKHMKDECYESPDDTNTMPLY 773
VHVFVVGDQ+HP+I IR E++ L K MKDE Y+ ++ + Y
Sbjct: 661 GVHVFVVGDQMHPEIKTIREEVQMLSKQMKDEGYQPSSESVSATSY 706
BLAST of ClCG08G013940 vs. TrEMBL
Match:
B9R8H7_RICCO (Pentatricopeptide repeat-containing protein, putative OS=Ricinus communis GN=RCOM_1599850 PE=4 SV=1)
HSP 1 Score: 1053.1 bits (2722), Expect = 1.6e-304
Identity = 519/699 (74.25%), Postives = 598/699 (85.55%), Query Frame = 1
Query: 71 PQHRSFFNLLLRYTHQKDLQKGKAIHAQLLRTGSFSS-VYLTNSLVNLYAKCGSLVKAKL 130
PQ+ S FN L+++THQK LQKG+A+HAQ+++ S SS +YL NSL+N YAKC L KAKL
Sbjct: 5 PQNLSSFNSLVQFTHQKSLQKGRALHAQIIKLASSSSCIYLANSLINFYAKCCHLPKAKL 64
Query: 131 VFESITNKDVVSWNCLINAYSQQGPVGCSFVMELFQRMRAENTLPNAHTFAGVFTAASSS 190
VF+ I NKDV+SWNCLIN YSQQGP G SFVMELFQRMRA+N LPNAHTF+G+FTAAS+
Sbjct: 65 VFDRIHNKDVISWNCLINGYSQQGPTGSSFVMELFQRMRADNILPNAHTFSGIFTAASNL 124
Query: 191 LETFGGLQAHALAIKTSSFYDVFVGSSLLNMYCKIGCLLDARKVFDRIPERNSVSWSTMI 250
F G QAHA+AIK + FYDVFVGSSLLNMYCK G L +AR+VFDR+PERN V+W+TMI
Sbjct: 125 SSIFFGQQAHAVAIKMACFYDVFVGSSLLNMYCKAGLLFEAREVFDRMPERNEVTWATMI 184
Query: 251 SGYAMERMASEAWELFLLLRREEGIHNEFIYTGVLSALTVPELVHYGKQIHCLAFKNGLL 310
SGYA++R+A EA+E+F L+RREE NEF +T VLSAL VPE V GKQIHCLA K GLL
Sbjct: 185 SGYAIQRLAGEAFEVFELMRREEEDVNEFAFTSVLSALAVPEFVDSGKQIHCLAVKTGLL 244
Query: 311 SIVSVGNALVTMYGKCGCLDDALKTFEFSGDKNSITWSAMITGYAQAGDSHEALKLFSYM 370
+S+ NALVTMY KCG LDD+L+ FE S DKNSITWSAMITGYAQ+GDSH+ALKLFS M
Sbjct: 245 VFLSILNALVTMYAKCGSLDDSLQVFEMSNDKNSITWSAMITGYAQSGDSHKALKLFSRM 304
Query: 371 HFNGNKPSEFTFVGVINACSDIGALKEGKQMHGYSLKMGYESQIYIMTALVDMYAKCGSL 430
HF G PSEFT VGV+NACSD A++EGKQ+H Y LK+G+ESQ+YIMTALVDMYAK G
Sbjct: 305 HFAGINPSEFTLVGVLNACSDACAVEEGKQVHNYLLKLGFESQLYIMTALVDMYAKSGVT 364
Query: 431 VDARNGFDYLKEPDIVLWTSMIGGYAQNGENETALTLYCRMQMEGILPNELTMASVLRAC 490
DAR GF+YL++PD+VLWTSMI GY QNGENE AL+LYCRMQMEGILPNELTMASVL+AC
Sbjct: 365 EDARKGFNYLQQPDLVLWTSMIAGYVQNGENEDALSLYCRMQMEGILPNELTMASVLKAC 424
Query: 491 SSLAALEQGKQIHARTIKYGFNLEVPIGSALSTMYAKCGSLEDGNLVFRRMPTRDILSWN 550
S+LAA +QG+QIHARTIKYG LEV IGSALSTMYAKCG+LE+GN+VFRRMP RDI+SWN
Sbjct: 425 SNLAAFDQGRQIHARTIKYGLGLEVTIGSALSTMYAKCGNLEEGNIVFRRMPERDIISWN 484
Query: 551 AMISGLSQNGEGFKALELFEEMRQGTTKPDYVTFVNILSACSHMGLVERGKVYFKMMRDE 610
AMISGLSQNG G +ALELFEEMRQ TKPD VTFVN+LSACSHMGLV+ G +YF+MM DE
Sbjct: 485 AMISGLSQNGYGKEALELFEEMRQQDTKPDDVTFVNVLSACSHMGLVDSGWLYFRMMFDE 544
Query: 611 FGIVPRVEHYACMVDILSRAGKLQEAKEFIESVTIDHGMYLWRILLGACRNYRNYELGAY 670
FG++P+VEHYACMVD+LSRAGKL EAKEFIES TIDHG+ LWRILLGACRNYRNYELGAY
Sbjct: 545 FGLLPKVEHYACMVDVLSRAGKLYEAKEFIESTTIDHGLCLWRILLGACRNYRNYELGAY 604
Query: 671 AGEKLMELGSEESSAYVLLSSIYAALGRSDDVERVRRVMKLRGVNKDPGCSWIELKSQVH 730
AGEKLMELGS+ESSAYVLLS IY ALGR +DVERVR +MK+RGV+K+PGCSWIELKS VH
Sbjct: 605 AGEKLMELGSQESSAYVLLSGIYTALGRPEDVERVRSMMKVRGVSKEPGCSWIELKSNVH 664
Query: 731 VFVVGDQIHPQIVNIRSELRRLRKHMKDECYESPDDTNT 769
VFVVGDQ+HP I IR+E+ RL K MKDE Y+ T++
Sbjct: 665 VFVVGDQMHPCIGEIRTEILRLSKQMKDEGYQPASVTDS 703
BLAST of ClCG08G013940 vs. TAIR10
Match:
AT2G33680.1 (AT2G33680.1 Tetratricopeptide repeat (TPR)-like superfamily protein)
HSP 1 Score: 817.0 bits (2109), Expect = 9.9e-237
Identity = 410/700 (58.57%), Postives = 513/700 (73.29%), Query Frame = 1
Query: 71 PQHRSFFNLLLRYTHQKDLQKGKAIHAQLLRTGSFSSVYLTNSLVNLYAKCGSLVKAKLV 130
P + L ++ Q++L G+A+H Q++RTG+ + + N LVN YAKCG L KA +
Sbjct: 12 PHTSTLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHSI 71
Query: 131 FESITNKDVVSWNCLINAYSQQGPVGCSF-VMELFQRMRAENTLPNAHTFAGVFTAASSS 190
F +I KDVVSWN LI YSQ G + S+ VM+LF+ MRA++ LPNA+T AG+F A SS
Sbjct: 72 FNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSL 131
Query: 191 LETFGGLQAHALAIKTSSFYDVFVGSSLLNMYCKIGCLLDARKVFDRIPERNSVSWSTMI 250
+ G QAHAL +K SSF D++V +SL+ MYCK G + D KVF +PERN+ +WSTM+
Sbjct: 132 QSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMV 191
Query: 251 SGYAMERMASEAWELFLLLRRE--EGIHNEFIYTGVLSALTVPELVHYGKQIHCLAFKNG 310
SGYA EA ++F L RE EG +++++T VLS+L V G+QIHC+ KNG
Sbjct: 192 SGYATRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAATIYVGLGRQIHCITIKNG 251
Query: 311 LLSIVSVGNALVTMYGKCGCLDDALKTFEFSGDKNSITWSAMITGYAQAGDSHEALKLFS 370
LL V++ NALVTMY KC L++A K F+ SGD+NSITWSAM+TGY+Q G+S EA+KLFS
Sbjct: 252 LLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFS 311
Query: 371 YMHFNGNKPSEFTFVGVINACSDIGALKEGKQMHGYSLKMGYESQIYIMTALVDMYAKCG 430
M G KPSE+T VGV+NACSDI L+EGKQ+H + LK+G+E ++ TALVDMYAK G
Sbjct: 312 RMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAG 371
Query: 431 SLVDARNGFDYLKEPDIVLWTSMIGGYAQNGENETALTLYCRMQMEGILPNELTMASVLR 490
L DAR GFD L+E D+ LWTS+I GY QN +NE AL LY RM+ GI+PN+ TMASVL+
Sbjct: 372 CLADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLK 431
Query: 491 ACSSLAALEQGKQIHARTIKYGFNLEVPIGSALSTMYAKCGSLEDGNLVFRRMPTRDILS 550
ACSSLA LE GKQ+H TIK+GF LEVPIGSALSTMY+KCGSLEDGNLVFRR P +D++S
Sbjct: 432 ACSSLATLELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVVS 491
Query: 551 WNAMISGLSQNGEGFKALELFEEMRQGTTKPDYVTFVNILSACSHMGLVERGKVYFKMMR 610
WNAMISGLS NG+G +ALELFEEM +PD VTFVNI+SACSH G VERG YF MM
Sbjct: 492 WNAMISGLSHNGQGDEALELFEEMLAEGMEPDDVTFVNIISACSHKGFVERGWFYFNMMS 551
Query: 611 DEFGIVPRVEHYACMVDILSRAGKLQEAKEFIESVTIDHGMYLWRILLGACRNYRNYELG 670
D+ G+ P+V+HYACMVD+LSRAG+L+EAKEFIES IDHG+ LWRILL AC+N+ ELG
Sbjct: 552 DQIGLDPKVDHYACMVDLLSRAGQLKEAKEFIESANIDHGLCLWRILLSACKNHGKCELG 611
Query: 671 AYAGEKLMELGSEESSAYVLLSSIYAALGRSDDVERVRRVMKLRGVNKDPGCSWIELKSQ 730
YAGEKLM LGS ESS YV LS IY ALGR DVERV + M+ GV+K+ GCSWIELK+Q
Sbjct: 612 VYAGEKLMALGSRESSTYVQLSGIYTALGRMRDVERVWKHMRANGVSKEVGCSWIELKNQ 671
Query: 731 VHVFVVGDQIHPQIVNIRSELRRLRKHMKDECYESPDDTN 768
HVFVVGD +HP I + + + + M +E + + D++
Sbjct: 672 YHVFVVGDTMHPMIEETKDLVCLVSRQMIEEGFVTVLDSS 711
BLAST of ClCG08G013940 vs. TAIR10
Match:
AT3G09040.1 (AT3G09040.1 Pentatricopeptide repeat (PPR) superfamily protein)
HSP 1 Score: 476.5 bits (1225), Expect = 3.2e-134
Identity = 261/680 (38.38%), Postives = 401/680 (58.97%), Query Frame = 1
Query: 88 DLQKGKAIHAQLLRTGSFSSVYLTNSLVNLYAKCGSLVKAKLVFESITNKDVVSWNCLIN 147
+L G +HA+ ++ G S++Y+ +SLV++Y+KC + A VFE++ K+ V WN +I
Sbjct: 342 NLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIR 401
Query: 148 AYSQQGPVGCSFVMELFQRMRAENTLPNAHTFAGVFTAASSSLETFGGLQAHALAIKTSS 207
Y+ G VMELF M++ + TF + + ++S + G Q H++ IK
Sbjct: 402 GYAHNGE--SHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKL 461
Query: 208 FYDVFVGSSLLNMYCKIGCLLDARKVFDRIPERNSVSWSTMISGYAMERMASEAWELFLL 267
++FVG++L++MY K G L DAR++F+R+ +R++V+W+T+I Y + SEA++LF
Sbjct: 462 AKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKR 521
Query: 268 LRREEGIHNEFIYTGVLSALTVPELVHYGKQIHCLAFKNGLLSIVSVGNALVTMYGKCGC 327
+ + + L A T ++ GKQ+HCL+ K GL + G++L+ MY KCG
Sbjct: 522 MNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGI 581
Query: 328 LDDALKTFEFSGDKNSITWSAMITGYAQAGDSHEALKLFSYMHFNGNKPSEFTFVGVINA 387
+ DA K F + + ++ +A+I GY+Q + EA+ LF M G PSE TF ++ A
Sbjct: 582 IKDARKVFSSLPEWSVVSMNALIAGYSQ-NNLEEAVVLFQEMLTRGVNPSEITFATIVEA 641
Query: 388 CSDIGALKEGKQMHGYSLKMGYESQ-IYIMTALVDMYAKCGSLVDARNGFDYLKEP-DIV 447
C +L G Q HG K G+ S+ Y+ +L+ MY + +A F L P IV
Sbjct: 642 CHKPESLTLGTQFHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEACALFSELSSPKSIV 701
Query: 448 LWTSMIGGYAQNGENETALTLYCRMQMEGILPNELTMASVLRACSSLAALEQGKQIHART 507
LWT M+ G++QNG E AL Y M+ +G+LP++ T +VLR CS L++L +G+ IH+
Sbjct: 702 LWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGRAIHSLI 761
Query: 508 IKYGFNLEVPIGSALSTMYAKCGSLEDGNLVFRRMPTR-DILSWNAMISGLSQNGEGFKA 567
+L+ + L MYAKCG ++ + VF M R +++SWN++I+G ++NG A
Sbjct: 762 FHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLINGYAKNGYAEDA 821
Query: 568 LELFEEMRQGTTKPDYVTFVNILSACSHMGLVERGKVYFKMMRDEFGIVPRVEHYACMVD 627
L++F+ MRQ PD +TF+ +L+ACSH G V G+ F+MM ++GI RV+H ACMVD
Sbjct: 822 LKIFDSMRQSHIMPDEITFLGVLTACSHAGKVSDGRKIFEMMIGQYGIEARVDHVACMVD 881
Query: 628 ILSRAGKLQEAKEFIESVTIDHGMYLWRILLGACRNYRNYELGAYAGEKLMELGSEESSA 687
+L R G LQEA +FIE+ + LW LLGACR + + G + EKL+EL + SSA
Sbjct: 882 LLGRWGYLQEADDFIEAQNLKPDARLWSSLLGACRIHGDDIRGEISAEKLIELEPQNSSA 941
Query: 688 YVLLSSIYAALGRSDDVERVRRVMKLRGVNKDPGCSWIELKSQVHVFVVGDQIHPQIVNI 747
YVLLS+IYA+ G + +R+VM+ RGV K PG SWI+++ + H+F GD+ H +I I
Sbjct: 942 YVLLSNIYASQGCWEKANALRKVMRDRGVKKVPGYSWIDVEQRTHIFAAGDKSHSEIGKI 1001
Query: 748 RSELRRLRKHMKDECYESPD 765
L L MKD+ +PD
Sbjct: 1002 EMFLEDLYDLMKDDAVVNPD 1018
HSP 2 Score: 294.3 bits (752), Expect = 2.2e-79
Identity = 178/576 (30.90%), Postives = 292/576 (50.69%), Query Frame = 1
Query: 113 SLVNLYAKCGSLVKAKLVFESITNKDVVSWNCLINAYSQQGPVGCSFV-MELFQRMRAEN 172
+++N Y + G L A+L+F +++ DVV+WN +I+ + ++G C V +E F MR +
Sbjct: 266 TVINTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRG---CETVAIEYFFNMRKSS 325
Query: 173 TLPNAHTFAGVFTAASSSLETFGGLQAHALAIKTSSFYDVFVGSSLLNMYCKIGCLLDAR 232
T V +A GL HA AIK +++VGSSL++MY K + A
Sbjct: 326 VKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAA 385
Query: 233 KVFDRIPERNSVSWSTMISGYAMERMASEAWELFLLLRREEGIHNEFIYTGVLSALTVPE 292
KVF+ + E+N V W+ MI GYA + + ELF+ ++ ++F +T +LS
Sbjct: 386 KVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASH 445
Query: 293 LVHYGKQIHCLAFKNGLLSIVSVGNALVTMYGKCGCLDDALKTFEFSGDKNSITWSAMIT 352
+ G Q H + K L + VGNALV MY KCG L+DA + FE D++++TW+ +I
Sbjct: 446 DLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIG 505
Query: 353 GYAQAGDSHEALKLFSYMHFNGNKPSEFTFVGVINACSDIGALKEGKQMHGYSLKMGYES 412
Y Q + EA LF M+ G + AC+ + L +GKQ+H S+K G +
Sbjct: 506 SYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDR 565
Query: 413 QIYIMTALVDMYAKCGSLVDARNGFDYLKEPDIVLWTSMIGGYAQNGENETALTLYCRMQ 472
++ ++L+DMY+KCG + DAR F L E +V ++I GY+QN E A+ L+ M
Sbjct: 566 DLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQNNLEE-AVVLFQEML 625
Query: 473 MEGILPNELTMASVLRACSSLAALEQGKQIHARTIKYGFNLEVP-IGSALSTMYAKCGSL 532
G+ P+E+T A+++ AC +L G Q H + K GF+ E +G +L MY +
Sbjct: 626 TRGVNPSEITFATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLGISLLGMYMNSRGM 685
Query: 533 EDGNLVFRRMPT-RDILSWNAMISGLSQNGEGFKALELFEEMRQGTTKPDYVTFVNILSA 592
+ +F + + + I+ W M+SG SQNG +AL+ ++EMR PD TFV +L
Sbjct: 686 TEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRV 745
Query: 593 CSHMGLVERGKVYFKMMRDEFGIVPRVEHYA--CMVDILSRAGKLQEAKEFIESVTIDHG 652
CS + + G+ ++ F + ++ ++D+ ++ G ++ + + + +
Sbjct: 746 CSVLSSLREGRAIHSLI---FHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMRRRSN 805
Query: 653 MYLWRILLGACRNYRNYELGAYAGEKLMELGSEESS 684
+ W L+ Y YA + L S S
Sbjct: 806 VVSWNSLI------NGYAKNGYAEDALKIFDSMRQS 828
HSP 3 Score: 280.8 bits (717), Expect = 2.5e-75
Identity = 171/523 (32.70%), Postives = 264/523 (50.48%), Query Frame = 1
Query: 69 VLPQHRSFFNLLLRYTHQKDLQKGKAIHAQLLRTGSFSSVYLTNSLVNLYAKCGSLVKAK 128
+ P +F +L + +++ G+ IH +++ G + Y +LV++YAKC + A+
Sbjct: 156 IFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDAR 215
Query: 129 LVFESITNKDVVSWNCLINAYSQQG-PVGCSFVMELFQRMRAENTLPNAHTFAGVFTAAS 188
VFE I + + V W CL + Y + G P V F+RMR E P+ F V
Sbjct: 216 RVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLV---FERMRDEGHRPDHLAFVTVI---- 275
Query: 189 SSLETFGGLQAHALAIKTSSFYDVFVGSSLLNMYCKIGCLLDARKVFDRIPERNSVSWST 248
++ G L+ L S DV V+W+
Sbjct: 276 NTYIRLGKLKDARLLFGEMSSPDV-------------------------------VAWNV 335
Query: 249 MISGYAMERMASEAWELFLLLRREEGIHNEFIYTGVLSALTVPELVHYGKQIHCLAFKNG 308
MISG+ + A E F +R+ VLSA+ + + G +H A K G
Sbjct: 336 MISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLG 395
Query: 309 LLSIVSVGNALVTMYGKCGCLDDALKTFEFSGDKNSITWSAMITGYAQAGDSHEALKLFS 368
L S + VG++LV+MY KC ++ A K FE +KN + W+AMI GYA G+SH+ ++LF
Sbjct: 396 LASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFM 455
Query: 369 YMHFNGNKPSEFTFVGVINACSDIGALKEGKQMHGYSLKMGYESQIYIMTALVDMYAKCG 428
M +G +FTF +++ C+ L+ G Q H +K +++ ALVDMYAKCG
Sbjct: 456 DMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCG 515
Query: 429 SLVDARNGFDYLKEPDIVLWTSMIGGYAQNGENETALTLYCRMQMEGILPNELTMASVLR 488
+L DAR F+ + + D V W ++IG Y Q+ A L+ RM + GI+ + +AS L+
Sbjct: 516 ALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLK 575
Query: 489 ACSSLAALEQGKQIHARTIKYGFNLEVPIGSALSTMYAKCGSLEDGNLVFRRMPTRDILS 548
AC+ + L QGKQ+H ++K G + ++ GS+L MY+KCG ++D VF +P ++S
Sbjct: 576 ACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVS 635
Query: 549 WNAMISGLSQNGEGFKALELFEEMRQGTTKPDYVTFVNILSAC 591
NA+I+G SQN +A+ LF+EM P +TF I+ AC
Sbjct: 636 MNALIAGYSQNNLE-EAVVLFQEMLTRGVNPSEITFATIVEAC 639
HSP 4 Score: 247.7 bits (631), Expect = 2.4e-65
Identity = 163/554 (29.42%), Postives = 268/554 (48.38%), Query Frame = 1
Query: 89 LQKGKAIHAQLLRTGSFSSVYLTNSLVNLYAKCGSLVKAKLVFESITNKDVVSWNCLINA 148
L+ GKA+H++ L G S L N++V+LYAKC + A+ F+ + KDV +WN +++
Sbjct: 76 LRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFL-EKDVTAWNSMLSM 135
Query: 149 YSQQGPVGCSFVMELFQRMRAENTLPNAHTFAGVFTAASSSLETFGGLQAHALAIKTSSF 208
YS G G V+ F + PN TF+ V + + G Q H IK
Sbjct: 136 YSSIGKPGK--VLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLE 195
Query: 209 YDVFVGSSLLNMYCKIGCLLDARKVFDRIPERNSVSWSTMISGYAMERMASEAWELFLLL 268
+ + G +L++MY K + DAR+VF+ I + N+V W+ + SGY + EA +F +
Sbjct: 196 RNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERM 255
Query: 269 RREEGIHNEFIYTGVLSALTVPELVHYGKQIHCLAFKNGLLSIVSVGNALVTMYGKCGCL 328
R E G + LAF ++ Y + G L
Sbjct: 256 RDE------------------------GHRPDHLAFVT-----------VINTYIRLGKL 315
Query: 329 DDALKTFEFSGDKNSITWSAMITGYAQAGDSHEALKLFSYMHFNGNKPSEFTFVGVINAC 388
DA F + + W+ MI+G+ + G A++ F M + K + T V++A
Sbjct: 316 KDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAI 375
Query: 389 SDIGALKEGKQMHGYSLKMGYESQIYIMTALVDMYAKCGSLVDARNGFDYLKEPDIVLWT 448
+ L G +H ++K+G S IY+ ++LV MY+KC + A F+ L+E + V W
Sbjct: 376 GIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWN 435
Query: 449 SMIGGYAQNGENETALTLYCRMQMEGILPNELTMASVLRACSSLAALEQGKQIHARTIKY 508
+MI GYA NGE+ + L+ M+ G ++ T S+L C++ LE G Q H+ IK
Sbjct: 436 AMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKK 495
Query: 509 GFNLEVPIGSALSTMYAKCGSLEDGNLVFRRMPTRDILSWNAMISGLSQNGEGFKALELF 568
+ +G+AL MYAKCG+LED +F RM RD ++WN +I Q+ +A +LF
Sbjct: 496 KLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLF 555
Query: 569 EEMRQGTTKPDYVTFVNILSACSHMGLVERGKVYFKMMRDEFGIVPRVEHYACMVDILSR 628
+ M D + L AC+H+ + +GK + + G+ + + ++D+ S+
Sbjct: 556 KRMNLCGIVSDGACLASTLKACTHVHGLYQGK-QVHCLSVKCGLDRDLHTGSSLIDMYSK 590
Query: 629 AGKLQEAKEFIESV 643
G +++A++ S+
Sbjct: 616 CGIIKDARKVFSSL 590
HSP 5 Score: 170.2 bits (430), Expect = 4.8e-42
Identity = 126/481 (26.20%), Postives = 212/481 (44.07%), Query Frame = 1
Query: 213 VGSSLLNMYCKIGCLLDARKVFDRIPERNSVSWSTMISGYAMERMASEAWELFLLLRREE 272
+G++++++Y K + A K FD + E++ +W++M+S Y+ + F+ L +
Sbjct: 97 LGNAIVDLYAKCAQVSYAEKQFDFL-EKDVTAWNSMLSMYSSIGKPGKVLRSFVSLFENQ 156
Query: 273 GIHNEFIYTGVLSALTVPELVHYGKQIHCLAFKNGLLSIVSVGNALVTMYGKCGCLDDAL 332
N+F ++ VLS V +G+QIHC K GL G ALV MY KC + DA
Sbjct: 157 IFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDAR 216
Query: 333 KTFEFSGDKNSITWSAMITGYAQAGDSHEALKLFSYMHFNGNKPSEFTFVGVINACSDIG 392
+ +F ++ F G + A G
Sbjct: 217 R-------------------------------VFEWIVDPNTVCWTCLFSGYVKA----G 276
Query: 393 ALKEGKQMHGYSLKMGYESQIYIMTALVDMYAKCGSLVDARNGFDYLKEPDIVLWTSMIG 452
+E + G+ +++ Y + G L DAR F + PD+V W MI
Sbjct: 277 LPEEAVLVFERMRDEGHRPDHLAFVTVINTYIRLGKLKDARLLFGEMSSPDVVAWNVMIS 336
Query: 453 GYAQNGENETALTLYCRMQMEGILPNELTMASVLRACSSLAALEQGKQIHARTIKYGFNL 512
G+ + G A+ + M+ + T+ SVL A +A L+ G +HA IK G
Sbjct: 337 GHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLAS 396
Query: 513 EVPIGSALSTMYAKCGSLEDGNLVFRRMPTRDILSWNAMISGLSQNGEGFKALELFEEMR 572
+ +GS+L +MY+KC +E VF + ++ + WNAMI G + NGE K +ELF +M+
Sbjct: 397 NIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMK 456
Query: 573 QGTTKPDYVTFVNILSACSHMGLVERGKVYFKMMRDEFGIVPRVEHYACMVDILSRAGKL 632
D TF ++LS C+ +E G + ++ + + + +VD+ ++ G L
Sbjct: 457 SSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKK-KLAKNLFVGNALVDMYAKCGAL 516
Query: 633 QEAKEFIESVTIDHGMYLWRILLGACRNYRNYELGAYAGEKLMELGSEESSAYVLLSSIY 692
++A++ E + D W ++G+ N E A+ K M L S L S++
Sbjct: 517 EDARQIFERM-CDRDNVTWNTIIGSYVQDEN-ESEAFDLFKRMNLCGIVSDGACLASTLK 538
Query: 693 A 694
A
Sbjct: 577 A 538
HSP 6 Score: 73.9 bits (180), Expect = 4.7e-13
Identity = 42/136 (30.88%), Postives = 71/136 (52.21%), Query Frame = 1
Query: 69 VLPQHRSFFNLLLRYTHQKDLQKGKAIHAQLLRTGSFSSVYLTNSLVNLYAKCGSLVKAK 128
VLP +F +L + L++G+AIH+ + +N+L+++YAKCG + +
Sbjct: 728 VLPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKGSS 787
Query: 129 LVFESITNK-DVVSWNCLINAYSQQGPVGCSFVMELFQRMRAENTLPNAHTFAGVFTAAS 188
VF+ + + +VVSWN LIN Y++ G +++F MR + +P+ TF GV TA S
Sbjct: 788 QVFDEMRRRSNVVSWNSLINGYAKNG--YAEDALKIFDSMRQSHIMPDEITFLGVLTACS 847
Query: 189 SSLETFGGLQAHALAI 204
+ + G + + I
Sbjct: 848 HAGKVSDGRKIFEMMI 861
BLAST of ClCG08G013940 vs. TAIR10
Match:
AT4G13650.1 (AT4G13650.1 Pentatricopeptide repeat (PPR) superfamily protein)
HSP 1 Score: 460.7 bits (1184), Expect = 1.8e-129
Identity = 246/695 (35.40%), Postives = 387/695 (55.68%), Query Frame = 1
Query: 69 VLPQHRSFFNLLLRYTHQKDLQKGKAIHAQLLRTGSFSSVYLTNSLVNLYAKCGSLVKAK 128
++P +F ++L + L+ G+ +H +L+ G S Y+ N+LV+LY G+L+ A+
Sbjct: 284 IMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAE 343
Query: 129 LVFESITNKDVVSWNCLINAYSQQGPVGCSF---VMELFQRMRAENTLPNAHTFAGVFTA 188
+F +++ +D V++N LIN SQ C + MELF+RM + P+++T A + A
Sbjct: 344 HIFSNMSQRDAVTYNTLINGLSQ-----CGYGEKAMELFKRMHLDGLEPDSNTLASLVVA 403
Query: 189 ASSSLETFGGLQAHALAIKTSSFYDVFVGSSLLNMYCKIGCLLDARKVFDRIPERNSVSW 248
S+ F G Q HA K + + +LLN+Y K + A F N V W
Sbjct: 404 CSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLW 463
Query: 249 STMISGYAMERMASEAWELFLLLRREEGIHNEFIYTGVLSALTVPELVHYGKQIHCLAFK 308
+ M+ Y + ++ +F ++ EE + N++ Y +L + G+QIH K
Sbjct: 464 NVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIK 523
Query: 309 NGLLSIVSVGNALVTMYGKCGCLDDALKTFEFSGDKNSITWSAMITGYAQAGDSHEALKL 368
V + L+ MY K G LD A K+ ++W+ MI GY Q +AL
Sbjct: 524 TNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTT 583
Query: 369 FSYMHFNGNKPSEFTFVGVINACSDIGALKEGKQMHGYSLKMGYESQIYIMTALVDMYAK 428
F M G + E ++AC+ + ALKEG+Q+H + G+ S + ALV +Y++
Sbjct: 584 FRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSR 643
Query: 429 CGSLVDARNGFDYLKEPDIVLWTSMIGGYAQNGENETALTLYCRMQMEGILPNELTMASV 488
CG + ++ F+ + D + W +++ G+ Q+G NE AL ++ RM EGI N T S
Sbjct: 644 CGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSA 703
Query: 489 LRACSSLAALEQGKQIHARTIKYGFNLEVPIGSALSTMYAKCGSLEDGNLVFRRMPTRDI 548
++A S A ++QGKQ+HA K G++ E + +AL +MYAKCGS+ D F + T++
Sbjct: 704 VKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNE 763
Query: 549 LSWNAMISGLSQNGEGFKALELFEEMRQGTTKPDYVTFVNILSACSHMGLVERGKVYFKM 608
+SWNA+I+ S++G G +AL+ F++M +P++VT V +LSACSH+GLV++G YF+
Sbjct: 764 VSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFES 823
Query: 609 MRDEFGIVPRVEHYACMVDILSRAGKLQEAKEFIESVTIDHGMYLWRILLGACRNYRNYE 668
M E+G+ P+ EHY C+VD+L+RAG L AKEFI+ + I +WR LL AC ++N E
Sbjct: 824 MNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHKNME 883
Query: 669 LGAYAGEKLMELGSEESSAYVLLSSIYAALGRSDDVERVRRVMKLRGVNKDPGCSWIELK 728
+G +A L+EL E+S+ YVLLS++YA + D + R+ MK +GV K+PG SWIE+K
Sbjct: 884 IGEFAAHHLLELEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEKGVKKEPGQSWIEVK 943
Query: 729 SQVHVFVVGDQIHPQIVNIRSELRRLRKHMKDECY 761
+ +H F VGDQ HP I + L K + Y
Sbjct: 944 NSIHSFYVGDQNHPLADEIHEYFQDLTKRASEIGY 973
HSP 2 Score: 275.8 bits (704), Expect = 8.2e-74
Identity = 178/578 (30.80%), Postives = 287/578 (49.65%), Query Frame = 1
Query: 89 LQKGKAIHAQLLRTGSFSSVYLTNSLVNLYAKCGSLVKAKLVFESITNKDVVSWNCLINA 148
L +G+ +H+Q+L+ G S+ L+ L + Y G L A VF+ + + + +WN +I
Sbjct: 101 LDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPERTIFTWNKMIKE 160
Query: 149 YSQQGPVGCSFVMELFQRMRAENTLPNAHTFAGVFTAASSSLETFGGL-QAHALAIKTSS 208
+ + +G V LF RM +EN PN TF+GV A F + Q HA +
Sbjct: 161 LASRNLIG--EVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARILYQGL 220
Query: 209 FYDVFVGSSLLNMYCKIGCLLDARKVFDRIPERNSVSWSTMISGYAMERMASEAWELFLL 268
V + L+++Y + G + AR+VFD + ++ SW MISG + +EA LF
Sbjct: 221 RDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCD 280
Query: 269 LRREEGIHNEFIYTGVLSALTVPELVHYGKQIHCLAFKNGLLSIVSVGNALVTMYGKCGC 328
+ + + ++ VLSA E + G+Q+H L K G S V NALV++Y G
Sbjct: 281 MYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGN 340
Query: 329 LDDALKTFEFSGDKNSITWSAMITGYAQAGDSHEALKLFSYMHFNGNKPSEFTFVGVINA 388
L A F ++++T++ +I G +Q G +A++LF MH +G +P T ++ A
Sbjct: 341 LISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVA 400
Query: 389 CSDIGALKEGKQMHGYSLKMGYESQIYIMTALVDMYAKCGSLVDARNGFDYLKEPDIVLW 448
CS G L G+Q+H Y+ K+G+ S I AL+++YAKC + A + F + ++VLW
Sbjct: 401 CSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLW 460
Query: 449 TSMIGGYAQNGENETALTLYCRMQMEGILPNELTMASVLRACSSLAALEQGKQIHARTIK 508
M+ Y + + ++ +MQ+E I+PN+ T S+L+ C L LE G+QIH++ IK
Sbjct: 461 NVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIK 520
Query: 509 YGFNLEVPIGSALSTMYAKCGSLEDGNLVFRRMPTRDILSWNAMISGLSQNGEGFKALEL 568
F L + S L MYAK G L+ + R +D++SW MI+G +Q KAL
Sbjct: 521 TNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTT 580
Query: 569 FEEMRQGTTKPDYVTFVNILSACSHMGLVERGKVYFKMMRDEFGIVPRVEHYACMVDILS 628
F +M + D V N +SAC+ + ++ G+ G + +V + S
Sbjct: 581 FRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQ-QIHAQACVSGFSSDLPFQNALVTLYS 640
Query: 629 RAGKLQEAKEFIESVTIDHGMYLWRILLGACRNYRNYE 666
R GK++E+ E + W L+ + N E
Sbjct: 641 RCGKIEESYLAFEQTEAGDNI-AWNALVSGFQQSGNNE 674
HSP 3 Score: 269.2 bits (687), Expect = 7.7e-72
Identity = 160/578 (27.68%), Postives = 294/578 (50.87%), Query Frame = 1
Query: 95 IHAQLLRTGSFSSVYLTNSLVNLYAKCGSLVKAKLVFESITNKDVVSWNCLINAYSQQGP 154
IHA++L G S + N L++LY++ G + A+ VF+ + KD SW +I+ S+
Sbjct: 209 IHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNE- 268
Query: 155 VGCSF-VMELFQRMRAENTLPNAHTFAGVFTAASSSLETFGGLQAHALAIKTSSFYDVFV 214
C + LF M +P + F+ V +A G Q H L +K D +V
Sbjct: 269 --CEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYV 328
Query: 215 GSSLLNMYCKIGCLLDARKVFDRIPERNSVSWSTMISGYAMERMASEAWELFLLLRREEG 274
++L+++Y +G L+ A +F + +R++V+++T+I+G + +A ELF + +
Sbjct: 329 CNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGL 388
Query: 275 IHNEFIYTGVLSALTVPELVHYGKQIHCLAFKNGLLSIVSVGNALVTMYGKCGCLDDALK 334
+ ++ A + + G+Q+H K G S + AL+ +Y KC ++ AL
Sbjct: 389 EPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALD 448
Query: 335 TFEFSGDKNSITWSAMITGYAQAGDSHEALKLFSYMHFNGNKPSEFTFVGVINACSDIGA 394
F + +N + W+ M+ Y D + ++F M P+++T+ ++ C +G
Sbjct: 449 YFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGD 508
Query: 395 LKEGKQMHGYSLKMGYESQIYIMTALVDMYAKCGSLVDARNGFDYLKEPDIVLWTSMIGG 454
L+ G+Q+H +K ++ Y+ + L+DMYAK G L A + D+V WT+MI G
Sbjct: 509 LELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAG 568
Query: 455 YAQNGENETALTLYCRMQMEGILPNELTMASVLRACSSLAALEQGKQIHARTIKYGFNLE 514
Y Q ++ ALT + +M GI +E+ + + + AC+ L AL++G+QIHA+ GF+ +
Sbjct: 569 YTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSD 628
Query: 515 VPIGSALSTMYAKCGSLEDGNLVFRRMPTRDILSWNAMISGLSQNGEGFKALELFEEMRQ 574
+P +AL T+Y++CG +E+ L F + D ++WNA++SG Q+G +AL +F M +
Sbjct: 629 LPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNR 688
Query: 575 GTTKPDYVTFVNILSACSHMGLVERGKVYFKMMRDEFGIVPRVEHYACMVDILSRAGKLQ 634
+ TF + + A S +++GK ++ + G E ++ + ++ G +
Sbjct: 689 EGIDNNNFTFGSAVKAASETANMKQGKQVHAVI-TKTGYDSETEVCNALISMYAKCGSIS 748
Query: 635 EA-KEFIESVTIDHGMYLWRILLGACRNYRNYELGAYA 671
+A K+F+E T + W ++ A Y + G+ A
Sbjct: 749 DAEKQFLEVSTKNE--VSWNAIINA---YSKHGFGSEA 777
HSP 4 Score: 109.4 bits (272), Expect = 1.0e-23
Identity = 79/255 (30.98%), Postives = 119/255 (46.67%), Query Frame = 1
Query: 348 AMITGYAQAGDSHEALKLFSYMHFNGNKPSEFTFVGVINACSDI-GALKEGKQMHGYSLK 407
A I+ Y +S + ++ S + G +P+ T ++ C G+L EG+++H LK
Sbjct: 55 AAISVYISEDESFQEKRIDSVEN-RGIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILK 114
Query: 408 MGYESQIYIMTALVDMYAKCGSLVDARNGFDYLKEPDIVLWTSMIGGYAQNGENETALTL 467
+G +S + L D Y G L A FD + E I W MI A L
Sbjct: 115 LGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGL 174
Query: 468 YCRMQMEGILPNELTMASVLRAC-SSLAALEQGKQIHARTIKYGFNLEVPIGSALSTMYA 527
+ RM E + PNE T + VL AC A + +QIHAR + G + + L +Y+
Sbjct: 175 FVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYS 234
Query: 528 KCGSLEDGNLVFRRMPTRDILSWNAMISGLSQNGEGFKALELFEEMRQGTTKPDYVTFVN 587
+ G ++ VF + +D SW AMISGLS+N +A+ LF +M P F +
Sbjct: 235 RNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSS 294
Query: 588 ILSACSHMGLVERGK 601
+LSAC + +E G+
Sbjct: 295 VLSACKKIESLEIGE 308
BLAST of ClCG08G013940 vs. TAIR10
Match:
AT2G27610.1 (AT2G27610.1 Tetratricopeptide repeat (TPR)-like superfamily protein)
HSP 1 Score: 456.1 bits (1172), Expect = 4.4e-128
Identity = 251/675 (37.19%), Postives = 390/675 (57.78%), Query Frame = 1
Query: 92 GKAIHAQLLRTGSFSSVYLTNSLVNLYAKCGSLVKAKLVFESITNKDVVSWNCLINAYSQ 151
G+ +H Q ++ G V + SLV+ Y K + + VF+ + ++VV+W LI+ Y++
Sbjct: 112 GRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYAR 171
Query: 152 QGPVGCSFVMELFQRMRAENTLPNAHTFAGVFTAASSSLETFGGLQAHALAIKTSSFYDV 211
V+ LF RM+ E T PN+ TFA + GLQ H + +K +
Sbjct: 172 NSMN--DEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTI 231
Query: 212 FVGSSLLNMYCKIGCLLDARKVFDRIPERNSVSWSTMISGYAMERMASEAWELFLLLRRE 271
V +SL+N+Y K G + AR +FD+ ++ V+W++MISGYA + EA +F +R
Sbjct: 232 PVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLN 291
Query: 272 EGIHNEFIYTGVLSALTVPELVHYGKQIHCLAFKNGLLSIVSVGNALVTMYGKCGCLDDA 331
+E + V+ + + + +Q+HC K G L ++ AL+ Y KC + DA
Sbjct: 292 YVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDA 351
Query: 332 LKTFEFSGDK-NSITWSAMITGYAQAGDSHEALKLFSYMHFNGNKPSEFTFVGVINACSD 391
L+ F+ G N ++W+AMI+G+ Q EA+ LFS M G +P+EFT+ ++ A
Sbjct: 352 LRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPV 411
Query: 392 IGALKEGKQMHGYSLKMGYESQIYIMTALVDMYAKCGSLVDARNGFDYLKEPDIVLWTSM 451
I ++H +K YE + TAL+D Y K G + +A F + + DIV W++M
Sbjct: 412 ISP----SEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAM 471
Query: 452 IGGYAQNGENETALTLYCRMQMEGILPNELTMASVLRACSSL-AALEQGKQIHARTIKYG 511
+ GYAQ GE E A+ ++ + GI PNE T +S+L C++ A++ QGKQ H IK
Sbjct: 472 LAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSR 531
Query: 512 FNLEVPIGSALSTMYAKCGSLEDGNLVFRRMPTRDILSWNAMISGLSQNGEGFKALELFE 571
+ + + SAL TMYAK G++E VF+R +D++SWN+MISG +Q+G+ KAL++F+
Sbjct: 532 LDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFK 591
Query: 572 EMRQGTTKPDYVTFVNILSACSHMGLVERGKVYFKMMRDEFGIVPRVEHYACMVDILSRA 631
EM++ K D VTF+ + +AC+H GLVE G+ YF +M + I P EH +CMVD+ SRA
Sbjct: 592 EMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRA 651
Query: 632 GKLQEAKEFIESVTIDHGMYLWRILLGACRNYRNYELGAYAGEKLMELGSEESSAYVLLS 691
G+L++A + IE++ G +WR +L ACR ++ ELG A EK++ + E+S+AYVLLS
Sbjct: 652 GQLEKAMKVIENMPNPAGSTIWRTILAACRVHKKTELGRLAAEKIIAMKPEDSAAYVLLS 711
Query: 692 SIYAALGRSDDVERVRRVMKLRGVNKDPGCSWIELKSQVHVFVVGDQIHPQIVNIRSELR 751
++YA G + +VR++M R V K+PG SWIE+K++ + F+ GD+ HP I +L
Sbjct: 712 NMYAESGDWQERAKVRKLMNERNVKKEPGYSWIEVKNKTYSFLAGDRSHPLKDQIYMKLE 771
Query: 752 RLRKHMKDECYESPD 765
L +KD YE PD
Sbjct: 772 DLSTRLKDLGYE-PD 779
HSP 2 Score: 263.1 bits (671), Expect = 5.5e-70
Identity = 164/520 (31.54%), Postives = 270/520 (51.92%), Query Frame = 1
Query: 124 LVKAKLVFESITNKDVVSWNCLINAYSQQGPVGCSFVMELFQRMRAENTLPNAHTFAGVF 183
L A +F+ +D S+ L+ +S+ G LF + + F+ V
Sbjct: 43 LYNAHNLFDKSPGRDRESYISLLFGFSRDGRT--QEAKRLFLNIHRLGMEMDCSIFSSVL 102
Query: 184 TAASSSLETFGGLQAHALAIKTSSFYDVFVGSSLLNMYCKIGCLLDARKVFDRIPERNSV 243
+++ + G Q H IK DV VG+SL++ Y K D RKVFD + ERN V
Sbjct: 103 KVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVV 162
Query: 244 SWSTMISGYAMERMASEAWELFLLLRREEGIHNEFIYTGVLSALTVPELVHYGKQIHCLA 303
+W+T+ISGYA M E LF+ ++ E N F + L L + G Q+H +
Sbjct: 163 TWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVV 222
Query: 304 FKNGLLSIVSVGNALVTMYGKCGCLDDALKTFEFSGDKNSITWSAMITGYAQAGDSHEAL 363
KNGL + V N+L+ +Y KCG + A F+ + K+ +TW++MI+GYA G EAL
Sbjct: 223 VKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEAL 282
Query: 364 KLFSYMHFNGNKPSEFTFVGVINACSDIGALKEGKQMHGYSLKMGYESQIYIMTALVDMY 423
+F M N + SE +F VI C+++ L+ +Q+H +K G+ I TAL+ Y
Sbjct: 283 GMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAY 342
Query: 424 AKCGSLVDARNGFDYLK-EPDIVLWTSMIGGYAQNGENETALTLYCRMQMEGILPNELTM 483
+KC +++DA F + ++V WT+MI G+ QN E A+ L+ M+ +G+ PNE T
Sbjct: 343 SKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTY 402
Query: 484 ASVLRACSSLAALEQGKQIHARTIKYGFNLEVPIGSALSTMYAKCGSLEDGNLVFRRMPT 543
+ +L A ++ E +HA+ +K + +G+AL Y K G +E+ VF +
Sbjct: 403 SVILTALPVISPSE----VHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDD 462
Query: 544 RDILSWNAMISGLSQNGEGFKALELFEEMRQGTTKPDYVTFVNILSACSHMGL-VERGKV 603
+DI++W+AM++G +Q GE A+++F E+ +G KP+ TF +IL+ C+ + +GK
Sbjct: 463 KDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQ 522
Query: 604 YFKMMRDEFGIVPRVEHYAC----MVDILSRAGKLQEAKE 638
+ F I R++ C ++ + ++ G ++ A+E
Sbjct: 523 F-----HGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEE 551
HSP 3 Score: 92.8 bits (229), Expect = 9.8e-19
Identity = 64/257 (24.90%), Postives = 128/257 (49.81%), Query Frame = 1
Query: 429 LVDARNGFDYLKEPDIVLWTSMIGGYAQNGENETALTLYCRMQMEGILPNELTMASVLRA 488
L +A N FD D + S++ G++++G + A L+ + G+ + +SVL+
Sbjct: 43 LYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKV 102
Query: 489 CSSLAALEQGKQIHARTIKYGFNLEVPIGSALSTMYAKCGSLEDGNLVFRRMPTRDILSW 548
++L G+Q+H + IK+GF +V +G++L Y K + +DG VF M R++++W
Sbjct: 103 SATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTW 162
Query: 549 NAMISGLSQNGEGFKALELFEEMRQGTTKPDYVTFVNILSACSHMGLVERG-KVYFKMMR 608
+ISG ++N + L LF M+ T+P+ TF L + G+ RG +V+ +++
Sbjct: 163 TTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVK 222
Query: 609 DEFGIVPRVEHYACMVDILSRAGKLQEAKEFIESVTIDHGMYLWRILLGACRNYRNYE-L 668
+ G+ + ++++ + G +++A+ + + + ++ G N + E L
Sbjct: 223 N--GLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEAL 282
Query: 669 GAYAGEKLMELGSEESS 684
G + +L + ESS
Sbjct: 283 GMFYSMRLNYVRLSESS 297
BLAST of ClCG08G013940 vs. TAIR10
Match:
AT2G13600.1 (AT2G13600.1 Pentatricopeptide repeat (PPR) superfamily protein)
HSP 1 Score: 450.7 bits (1158), Expect = 1.9e-126
Identity = 234/587 (39.86%), Postives = 347/587 (59.11%), Query Frame = 1
Query: 210 DVFVGSSLLNMYCKIGCLLDARKVFDRIPERNSVSWSTMISGYAMERMASEAWELFLLLR 269
+++ +S++ K+G L +A +F +PER+ +W++M+SG+A EA F ++
Sbjct: 85 NIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMH 144
Query: 270 REEGIHNEFIYTGVLSALTVPELVHYGKQIHCLAFKNGLLSIVSVGNALVTMYGKCGCLD 329
+E + NE+ + VLSA + ++ G Q+H L K+ LS V +G+ALV MY KCG ++
Sbjct: 145 KEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVN 204
Query: 330 DALKTFEFSGDKNSITWSAMITGYAQAGDSHEALKLFSYMHFNGNKPSEFTFVGVINACS 389
DA + F+ GD+N ++W+++IT + Q G + EAL +F M + +P E T VI+AC+
Sbjct: 205 DAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACA 264
Query: 390 DIGALKEGKQMHGYSLKMG-YESQIYIMTALVDMYAKCGSLVDARNGFD----------- 449
+ A+K G+++HG +K + I + A VDMYAKC + +AR FD
Sbjct: 265 SLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAET 324
Query: 450 --------------------YLKEPDIVLWTSMIGGYAQNGENETALTLYCRMQMEGILP 509
+ E ++V W ++I GY QNGENE AL+L+C ++ E + P
Sbjct: 325 SMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCP 384
Query: 510 NELTMASVLRACSSLAALEQGKQIHARTIKYGFNL------EVPIGSALSTMYAKCGSLE 569
+ A++L+AC+ LA L G Q H +K+GF ++ +G++L MY KCG +E
Sbjct: 385 THYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVE 444
Query: 570 DGNLVFRRMPTRDILSWNAMISGLSQNGEGFKALELFEEMRQGTTKPDYVTFVNILSACS 629
+G LVFR+M RD +SWNAMI G +QNG G +ALELF EM + KPD++T + +LSAC
Sbjct: 445 EGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACG 504
Query: 630 HMGLVERGKVYFKMMRDEFGIVPRVEHYACMVDILSRAGKLQEAKEFIESVTIDHGMYLW 689
H G VE G+ YF M +FG+ P +HY CMVD+L RAG L+EAK IE + + +W
Sbjct: 505 HAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIW 564
Query: 690 RILLGACRNYRNYELGAYAGEKLMELGSEESSAYVLLSSIYAALGRSDDVERVRRVMKLR 749
LL AC+ +RN LG Y EKL+E+ S YVLLS++YA LG+ +DV VR+ M+
Sbjct: 565 GSLLAACKVHRNITLGKYVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDVMNVRKSMRKE 624
Query: 750 GVNKDPGCSWIELKSQVHVFVVGDQIHPQIVNIRSELRRLRKHMKDE 759
GV K PGCSWI+++ HVF+V D+ HP+ I S L L M+ E
Sbjct: 625 GVTKQPGCSWIKIQGHDHVFMVKDKSHPRKKQIHSLLDILIAEMRPE 671
HSP 2 Score: 228.4 bits (581), Expect = 1.5e-59
Identity = 142/487 (29.16%), Postives = 240/487 (49.28%), Query Frame = 1
Query: 107 SVYLTNSLVNLYAKCGSLVKAKLVFESITNKDVVSWNCLINAYSQQGPVGCSFVMELFQR 166
++Y NS+V K G L +A +F S+ +D +WN +++ ++Q C + F
Sbjct: 85 NIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDR--CEEALCYFAM 144
Query: 167 MRAENTLPNAHTFAGVFTAASSSLETFGGLQAHALAIKTSSFYDVFVGSSLLNMYCKIGC 226
M E + N ++FA V +A S + G+Q H+L K+ DV++GS+L++MY K G
Sbjct: 145 MHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGN 204
Query: 227 LLDARKVFDRIPERNSVSWSTMISGYAMERMASEAWELFLLLRREEGIHNEFIYTGVLSA 286
+ DA++VFD + +RN VSW+++I+ + A EA ++F ++ +E V+SA
Sbjct: 205 VNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISA 264
Query: 287 LTVPELVHYGKQIHCLAFKNGLL-SIVSVGNALVTMYGKCGCLDDA-------------L 346
+ G+++H KN L + + + NA V MY KC + +A
Sbjct: 265 CASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIA 324
Query: 347 KTFEFSG------------------DKNSITWSAMITGYAQAGDSHEALKLFSYMHFNGN 406
+T SG ++N ++W+A+I GY Q G++ EAL LF +
Sbjct: 325 ETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESV 384
Query: 407 KPSEFTFVGVINACSDIGALKEGKQMHGYSLKMGY------ESQIYIMTALVDMYAKCGS 466
P+ ++F ++ AC+D+ L G Q H + LK G+ E I++ +L+DMY KCG
Sbjct: 385 CPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGC 444
Query: 467 LVDARNGFDYLKEPDIVLWTSMIGGYAQNGENETALTLYCRMQMEGILPNELTMASVLRA 526
+ + F + E D V W +MI G+AQNG AL L+ M G P+ +TM VL A
Sbjct: 445 VEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSA 504
Query: 527 CSSLAALEQGKQ-IHARTIKYGFNLEVPIGSALSTMYAKCGSLEDGNLVFRRMPTR-DIL 554
C +E+G+ + T +G + + + + G LE+ + MP + D +
Sbjct: 505 CGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSV 564
HSP 3 Score: 177.6 bits (449), Expect = 3.0e-44
Identity = 99/305 (32.46%), Postives = 171/305 (56.07%), Query Frame = 1
Query: 271 EEGIHNE-FIYTGVLSALTVPELVHYGKQIHCLAFKNGLLSIVSVGNALVTMYGKCGCLD 330
+ G NE FI ++ A + + G+Q+ F + N++VT K G LD
Sbjct: 48 KSGFSNEIFIQNRLIDAYSKCGSLEDGRQV----FDKMPQRNIYTWNSVVTGLTKLGFLD 107
Query: 331 DALKTFEFSGDKNSITWSAMITGYAQAGDSHEALKLFSYMHFNGNKPSEFTFVGVINACS 390
+A F +++ TW++M++G+AQ EAL F+ MH G +E++F V++ACS
Sbjct: 108 EADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSACS 167
Query: 391 DIGALKEGKQMHGYSLKMGYESQIYIMTALVDMYAKCGSLVDARNGFDYLKEPDIVLWTS 450
+ + +G Q+H K + S +YI +ALVDMY+KCG++ DA+ FD + + ++V W S
Sbjct: 168 GLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNS 227
Query: 451 MIGGYAQNGENETALTLYCRMQMEGILPNELTMASVLRACSSLAALEQGKQIHARTIKYG 510
+I + QNG AL ++ M + P+E+T+ASV+ AC+SL+A++ G+++H R +K
Sbjct: 228 LITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKND 287
Query: 511 -FNLEVPIGSALSTMYAKCGSLEDGNLVFRRMPTRDILSWNAMISGLSQNGEGFKALELF 570
++ + +A MYAKC +++ +F MP R++++ +MISG + A +F
Sbjct: 288 KLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMF 347
Query: 571 EEMRQ 574
+M +
Sbjct: 348 TKMAE 348
HSP 4 Score: 75.9 bits (185), Expect = 1.2e-13
Identity = 48/129 (37.21%), Postives = 72/129 (55.81%), Query Frame = 1
Query: 483 ASVLRAC--SSLAALEQGKQIHARTIKYGFNLEVPIGSALSTMYAKCGSLEDGNLVFRRM 542
A +L +C S L+A+ + +HA IK GF+ E+ I + L Y+KCGSLEDG VF +M
Sbjct: 23 AKLLDSCIKSKLSAIYV-RYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKM 82
Query: 543 PTRDILSWNAMISGLSQNGEGFKALELFEEMRQGTTKPDYVTFVNILSACSHMGLVERGK 602
P R+I +WN++++GL++ G +A LF M + D T+ +++S + E
Sbjct: 83 PQRNIYTWNSVVTGLTKLGFLDEADSLFRSM----PERDQCTWNSMVSGFAQHDRCEEAL 142
Query: 603 VYFKMMRDE 610
YF MM E
Sbjct: 143 CYFAMMHKE 146
BLAST of ClCG08G013940 vs. NCBI nr
Match:
gi|700207161|gb|KGN62280.1| (hypothetical protein Csa_2G348180 [Cucumis sativus])
HSP 1 Score: 1315.8 bits (3404), Expect = 0.0e+00
Identity = 658/758 (86.81%), Postives = 699/758 (92.22%), Query Frame = 1
Query: 23 KAGPIIELGLKVVDERW----PSPITNGKFPNWLRC---ASFGIEAELMNLPLVLPQHRS 82
+AGPII GLK + W P+PITNGK + L+ ASFGI+AELMNL L+ PQHRS
Sbjct: 41 QAGPIIVFGLK---DEWTKVGPNPITNGKILSSLQVRLRASFGIQAELMNLYLLPPQHRS 100
Query: 83 FFNLLLRYTHQKDLQKGKAIHAQLLRTGSFSSVYLTNSLVNLYAKCGSLVKAKLVFESIT 142
F +LLLR T QKDLQKGKAIHAQLLRTGSFSSVYLTNSLVNLYAKCGS+VKAKLVFESIT
Sbjct: 101 FVDLLLRCTRQKDLQKGKAIHAQLLRTGSFSSVYLTNSLVNLYAKCGSIVKAKLVFESIT 160
Query: 143 NKDVVSWNCLINAYSQQGPVGCSFVMELFQRMRAENTLPNAHTFAGVFTAASSSLETFGG 202
NKDVVSWNCLIN YSQ+G VG SFVMELFQRMRAENTLPN HTF+GVFTAASSS ETFGG
Sbjct: 161 NKDVVSWNCLINGYSQKGTVGYSFVMELFQRMRAENTLPNGHTFSGVFTAASSSPETFGG 220
Query: 203 LQAHALAIKTSSFYDVFVGSSLLNMYCKIGCLLDARKVFDRIPERNSVSWSTMISGYAME 262
LQAHALAIKTS+FYDVFVGSSL+NMYCKIGC+LDARKVFD IPERN+VSW+T+ISGYAME
Sbjct: 221 LQAHALAIKTSNFYDVFVGSSLINMYCKIGCMLDARKVFDTIPERNTVSWATIISGYAME 280
Query: 263 RMASEAWELFLLLRREEGIHNEFIYTGVLSALTVPELVHYGKQIHCLAFKNGLLSIVSVG 322
RMA EAWELFLL+RREEG H++FIYT VLSALTVP+LVHYGKQIHCLA KNGLLSI SVG
Sbjct: 281 RMAFEAWELFLLMRREEGAHDKFIYTSVLSALTVPDLVHYGKQIHCLALKNGLLSIASVG 340
Query: 323 NALVTMYGKCGCLDDALKTFEFSGDKNSITWSAMITGYAQAGDSHEALKLFSYMHFNGNK 382
NALVTMYGKCGCLDDA KTFE SGDK+ ITWSAMITGYAQAGDSHEAL LF MH NGNK
Sbjct: 341 NALVTMYGKCGCLDDAFKTFELSGDKDDITWSAMITGYAQAGDSHEALNLFYNMHLNGNK 400
Query: 383 PSEFTFVGVINACSDIGALKEGKQMHGYSLKMGYESQIYIMTALVDMYAKCGSLVDARNG 442
PSEFTFVGVINACSDIGAL+EGKQ+HGYSLK GYE QIY MTALVDMYAKCGSLVDAR G
Sbjct: 401 PSEFTFVGVINACSDIGALEEGKQIHGYSLKAGYECQIYFMTALVDMYAKCGSLVDARKG 460
Query: 443 FDYLKEPDIVLWTSMIGGYAQNGENETALTLYCRMQMEGILPNELTMASVLRACSSLAAL 502
FDYLKEPDIVLWTSMI GYAQNGENETALTLYCRMQME I+P+ELTMASVLRACSSLAAL
Sbjct: 461 FDYLKEPDIVLWTSMISGYAQNGENETALTLYCRMQMERIMPHELTMASVLRACSSLAAL 520
Query: 503 EQGKQIHARTIKYGFNLEVPIGSALSTMYAKCGSLEDGNLVFRRMPTRDILSWNAMISGL 562
EQGKQIHA+TIKYGF+LEVPIGSALSTMYAKCGSLEDGNLVFRRMP+RDI++WNAMISGL
Sbjct: 521 EQGKQIHAQTIKYGFSLEVPIGSALSTMYAKCGSLEDGNLVFRRMPSRDIMTWNAMISGL 580
Query: 563 SQNGEGFKALELFEEMRQGTTKPDYVTFVNILSACSHMGLVERGKVYFKMMRDEFGIVPR 622
SQNGEG KALELFEE+R GTTKPDYVTFVN+LSACSHMGLVERGKVYF+MM DEFGI+PR
Sbjct: 581 SQNGEGLKALELFEELRHGTTKPDYVTFVNVLSACSHMGLVERGKVYFRMMLDEFGIIPR 640
Query: 623 VEHYACMVDILSRAGKLQEAKEFIESVTIDHGMYLWRILLGACRNYRNYELGAYAGEKLM 682
VEHYACMVDILSRAGKL E KEFIES TIDHGM LWRILLGACRNYRNYELGAYAGEKLM
Sbjct: 641 VEHYACMVDILSRAGKLHETKEFIESATIDHGMCLWRILLGACRNYRNYELGAYAGEKLM 700
Query: 683 ELGSEESSAYVLLSSIYAALGRSDDVERVRRVMKLRGVNKDPGCSWIELKSQVHVFVVGD 742
ELGS+ESSAY+LLSSIY ALGRSDDVERVRR+MKLRGVNK+PGCSWIELKSQVHVFVVGD
Sbjct: 701 ELGSQESSAYILLSSIYTALGRSDDVERVRRLMKLRGVNKEPGCSWIELKSQVHVFVVGD 760
Query: 743 QIHPQIVNIRSELRRLRKHMKDECYESPDDTNTMPLYI 774
QIHPQIV I SELRRLR HMKDECYES +DTN+M LYI
Sbjct: 761 QIHPQIVKICSELRRLRDHMKDECYESFNDTNSMTLYI 795
BLAST of ClCG08G013940 vs. NCBI nr
Match:
gi|659089060|ref|XP_008445307.1| (PREDICTED: pentatricopeptide repeat-containing protein At2g33680 [Cucumis melo])
HSP 1 Score: 1289.2 bits (3335), Expect = 0.0e+00
Identity = 639/710 (90.00%), Postives = 670/710 (94.37%), Query Frame = 1
Query: 64 MNLPLVLPQHRSFFNLLLRYTHQKDLQKGKAIHAQLLRTGSFSSVYLTNSLVNLYAKCGS 123
M+L L+ PQHRSFF+LLLRYT QKDLQKGKAIHAQLLRTGS SVYLTNSLVNLYAKCGS
Sbjct: 1 MSLYLLPPQHRSFFDLLLRYTRQKDLQKGKAIHAQLLRTGSCCSVYLTNSLVNLYAKCGS 60
Query: 124 LVKAKLVFESITNKDVVSWNCLINAYSQQGPVGCSFVMELFQRMRAENTLPNAHTFAGVF 183
L+KAKLVFESI+NKDVVSWNCLIN YSQ+G VG SFVMELFQRMRAENTLPNAHTF+GVF
Sbjct: 61 LLKAKLVFESISNKDVVSWNCLINGYSQKGTVGSSFVMELFQRMRAENTLPNAHTFSGVF 120
Query: 184 TAASSSLETFGGLQAHALAIKTSSFYDVFVGSSLLNMYCKIGCLLDARKVFDRIPERNSV 243
TAASSS ETFGGLQAHALAIKTS+FYDVFVGSSL+NMYCKIGCLLDARKVFD IPERN V
Sbjct: 121 TAASSSPETFGGLQAHALAIKTSNFYDVFVGSSLINMYCKIGCLLDARKVFDTIPERNIV 180
Query: 244 SWSTMISGYAMERMASEAWELFLLLRREEGIHNEFIYTGVLSALTVPELVHYGKQIHCLA 303
SW+TMISGYAMERMA EAWELFLL+RREEG H++FIYTGVLSALTVP+LV YGKQIHCLA
Sbjct: 181 SWATMISGYAMERMALEAWELFLLMRREEGAHDKFIYTGVLSALTVPDLVRYGKQIHCLA 240
Query: 304 FKNGLLSIVSVGNALVTMYGKCGCLDDALKTFEFSGDKNSITWSAMITGYAQAGDSHEAL 363
KNGLLSI SVGNALVTMYGKCGCLDDALKTFE SGDK+ ITWSAMITGYAQAGDS EAL
Sbjct: 241 LKNGLLSIASVGNALVTMYGKCGCLDDALKTFELSGDKDDITWSAMITGYAQAGDSDEAL 300
Query: 364 KLFSYMHFNGNKPSEFTFVGVINACSDIGALKEGKQMHGYSLKMGYESQIYIMTALVDMY 423
KLF MH NGNKPSEFTFVGVINACSDIGAL+EGKQ+HGYSLK GYE QIY MTALVDMY
Sbjct: 301 KLFYNMHLNGNKPSEFTFVGVINACSDIGALEEGKQIHGYSLKAGYERQIYFMTALVDMY 360
Query: 424 AKCGSLVDARNGFDYLKEPDIVLWTSMIGGYAQNGENETALTLYCRMQMEGILPNELTMA 483
AKCGSLVDAR GFDYLKEPDIVLWTSMI GYAQNGENETALTLYCRMQMEGILP+ELTMA
Sbjct: 361 AKCGSLVDARKGFDYLKEPDIVLWTSMISGYAQNGENETALTLYCRMQMEGILPHELTMA 420
Query: 484 SVLRACSSLAALEQGKQIHARTIKYGFNLEVPIGSALSTMYAKCGSLEDGNLVFRRMPTR 543
SVLRACSSLAALEQGKQIHA+TIKYGF+LEVPIGSALSTMYAKCGS+EDGNLVFRRMPTR
Sbjct: 421 SVLRACSSLAALEQGKQIHAQTIKYGFSLEVPIGSALSTMYAKCGSVEDGNLVFRRMPTR 480
Query: 544 DILSWNAMISGLSQNGEGFKALELFEEMRQGTTKPDYVTFVNILSACSHMGLVERGKVYF 603
DI++WNAMISGLSQNGEG KALELFEEMR GTTKPDYVTFVN+LSACSHMGLVERGKVYF
Sbjct: 481 DIMTWNAMISGLSQNGEGLKALELFEEMRHGTTKPDYVTFVNVLSACSHMGLVERGKVYF 540
Query: 604 KMMRDEFGIVPRVEHYACMVDILSRAGKLQEAKEFIESVTIDHGMYLWRILLGACRNYRN 663
+MM D+FGIVPRVEHYACMVDILSRAGKL E KEFIES TIDHGM LWRILLGACRNYRN
Sbjct: 541 RMMLDDFGIVPRVEHYACMVDILSRAGKLHETKEFIESATIDHGMCLWRILLGACRNYRN 600
Query: 664 YELGAYAGEKLMELGSEESSAYVLLSSIYAALGRSDDVERVRRVMKLRGVNKDPGCSWIE 723
YELGAYAGEKLMELGS+ESSAY+LLSSIY ALGRSDDVERVRR+MKLRGVNK+PGCSWIE
Sbjct: 601 YELGAYAGEKLMELGSQESSAYILLSSIYTALGRSDDVERVRRLMKLRGVNKEPGCSWIE 660
Query: 724 LKSQVHVFVVGDQIHPQIVNIRSELRRLRKHMKDECYESPDDTNTMPLYI 774
LKSQVHVFVVGDQIHPQI IRSELRRLR HMKDECYES DDTN+M LYI
Sbjct: 661 LKSQVHVFVVGDQIHPQIFKIRSELRRLRDHMKDECYESFDDTNSMTLYI 710
BLAST of ClCG08G013940 vs. NCBI nr
Match:
gi|778670421|ref|XP_004142988.2| (PREDICTED: pentatricopeptide repeat-containing protein At2g33680 [Cucumis sativus])
HSP 1 Score: 1281.9 bits (3316), Expect = 0.0e+00
Identity = 633/710 (89.15%), Postives = 668/710 (94.08%), Query Frame = 1
Query: 64 MNLPLVLPQHRSFFNLLLRYTHQKDLQKGKAIHAQLLRTGSFSSVYLTNSLVNLYAKCGS 123
MNL L+ PQHRSF +LLLR T QKDLQKGKAIHAQLLRTGSFSSVYLTNSLVNLYAKCGS
Sbjct: 1 MNLYLLPPQHRSFVDLLLRCTRQKDLQKGKAIHAQLLRTGSFSSVYLTNSLVNLYAKCGS 60
Query: 124 LVKAKLVFESITNKDVVSWNCLINAYSQQGPVGCSFVMELFQRMRAENTLPNAHTFAGVF 183
+VKAKLVFESITNKDVVSWNCLIN YSQ+G VG SFVMELFQRMRAENTLPN HTF+GVF
Sbjct: 61 IVKAKLVFESITNKDVVSWNCLINGYSQKGTVGYSFVMELFQRMRAENTLPNGHTFSGVF 120
Query: 184 TAASSSLETFGGLQAHALAIKTSSFYDVFVGSSLLNMYCKIGCLLDARKVFDRIPERNSV 243
TAASSS ETFGGLQAHALAIKTS+FYDVFVGSSL+NMYCKIGC+LDARKVFD IPERN+V
Sbjct: 121 TAASSSPETFGGLQAHALAIKTSNFYDVFVGSSLINMYCKIGCMLDARKVFDTIPERNTV 180
Query: 244 SWSTMISGYAMERMASEAWELFLLLRREEGIHNEFIYTGVLSALTVPELVHYGKQIHCLA 303
SW+T+ISGYAMERMA EAWELFLL+RREEG H++FIYT VLSALTVP+LVHYGKQIHCLA
Sbjct: 181 SWATIISGYAMERMAFEAWELFLLMRREEGAHDKFIYTSVLSALTVPDLVHYGKQIHCLA 240
Query: 304 FKNGLLSIVSVGNALVTMYGKCGCLDDALKTFEFSGDKNSITWSAMITGYAQAGDSHEAL 363
KNGLLSI SVGNALVTMYGKCGCLDDA KTFE SGDK+ ITWSAMITGYAQAGDSHEAL
Sbjct: 241 LKNGLLSIASVGNALVTMYGKCGCLDDAFKTFELSGDKDDITWSAMITGYAQAGDSHEAL 300
Query: 364 KLFSYMHFNGNKPSEFTFVGVINACSDIGALKEGKQMHGYSLKMGYESQIYIMTALVDMY 423
LF MH NGNKPSEFTFVGVINACSDIGAL+EGKQ+HGYSLK GYE QIY MTALVDMY
Sbjct: 301 NLFYNMHLNGNKPSEFTFVGVINACSDIGALEEGKQIHGYSLKAGYECQIYFMTALVDMY 360
Query: 424 AKCGSLVDARNGFDYLKEPDIVLWTSMIGGYAQNGENETALTLYCRMQMEGILPNELTMA 483
AKCGSLVDAR GFDYLKEPDIVLWTSMI GYAQNGENETALTLYCRMQME I+P+ELTMA
Sbjct: 361 AKCGSLVDARKGFDYLKEPDIVLWTSMISGYAQNGENETALTLYCRMQMERIMPHELTMA 420
Query: 484 SVLRACSSLAALEQGKQIHARTIKYGFNLEVPIGSALSTMYAKCGSLEDGNLVFRRMPTR 543
SVLRACSSLAALEQGKQIHA+TIKYGF+LEVPIGSALSTMYAKCGSLEDGNLVFRRMP+R
Sbjct: 421 SVLRACSSLAALEQGKQIHAQTIKYGFSLEVPIGSALSTMYAKCGSLEDGNLVFRRMPSR 480
Query: 544 DILSWNAMISGLSQNGEGFKALELFEEMRQGTTKPDYVTFVNILSACSHMGLVERGKVYF 603
DI++WNAMISGLSQNGEG KALELFEE+R GTTKPDYVTFVN+LSACSHMGLVERGKVYF
Sbjct: 481 DIMTWNAMISGLSQNGEGLKALELFEELRHGTTKPDYVTFVNVLSACSHMGLVERGKVYF 540
Query: 604 KMMRDEFGIVPRVEHYACMVDILSRAGKLQEAKEFIESVTIDHGMYLWRILLGACRNYRN 663
+MM DEFGI+PRVEHYACMVDILSRAGKL E KEFIES TIDHGM LWRILLGACRNYRN
Sbjct: 541 RMMLDEFGIIPRVEHYACMVDILSRAGKLHETKEFIESATIDHGMCLWRILLGACRNYRN 600
Query: 664 YELGAYAGEKLMELGSEESSAYVLLSSIYAALGRSDDVERVRRVMKLRGVNKDPGCSWIE 723
YELGAYAGEKLMELGS+ESSAY+LLSSIY ALGRSDDVERVRR+MKLRGVNK+PGCSWIE
Sbjct: 601 YELGAYAGEKLMELGSQESSAYILLSSIYTALGRSDDVERVRRLMKLRGVNKEPGCSWIE 660
Query: 724 LKSQVHVFVVGDQIHPQIVNIRSELRRLRKHMKDECYESPDDTNTMPLYI 774
LKSQVHVFVVGDQIHPQIV I SELRRLR HMKDECYES +DTN+M LYI
Sbjct: 661 LKSQVHVFVVGDQIHPQIVKICSELRRLRDHMKDECYESFNDTNSMTLYI 710
BLAST of ClCG08G013940 vs. NCBI nr
Match:
gi|645251363|ref|XP_008231644.1| (PREDICTED: pentatricopeptide repeat-containing protein At2g33680 [Prunus mume])
HSP 1 Score: 1087.4 bits (2811), Expect = 0.0e+00
Identity = 543/702 (77.35%), Postives = 608/702 (86.61%), Query Frame = 1
Query: 64 MNLPLVLPQHRSFFNLLLRYTHQKDLQKGKAIHAQLLRTGSFSSVYLTNSLVNLYAKCGS 123
M+L + Q+RS F L++Y+ QKDLQKGKA+HAQ+++TG S VY+ NSLVNLYAKCG
Sbjct: 1 MSLSSLPSQYRSLFTTLIQYSRQKDLQKGKALHAQIIKTGPNSCVYIANSLVNLYAKCGD 60
Query: 124 LVKAKLVFESITNKDVVSWNCLINAYSQQGPVGCSFVMELFQRMRAENTLPNAHTFAGVF 183
L KAKLVFE+I +KDVVSWN LIN YSQQG G S VMELFQRMRAEN PNAHTFAGVF
Sbjct: 61 LPKAKLVFEAIPDKDVVSWNSLINGYSQQGQNGSSHVMELFQRMRAENAFPNAHTFAGVF 120
Query: 184 TAAS-SSLETFGGLQAHALAIKTSSFYDVFVGSSLLNMYCKIGCLLDARKVFDRIPERNS 243
TAAS +S + FGG QAHALAIK SFYDVFVGSSLLNMYCK G +LDARKVFDR+ ERNS
Sbjct: 121 TAASYASPDVFGGRQAHALAIKADSFYDVFVGSSLLNMYCKAGLVLDARKVFDRMLERNS 180
Query: 244 VSWSTMISGYAMERMASEAWELFLLLRREEGIH---NEFIYTGVLSALTVPELVHYGKQI 303
VSW+TMISGYA++R+A +A LF L+RR + NEF+ TGVLSAL +PE V GKQI
Sbjct: 181 VSWATMISGYAVQRLAGDALALFGLMRRRNEVKEEVNEFVLTGVLSALALPEFVGTGKQI 240
Query: 304 HCLAFKNGLLSIVSVGNALVTMYGKCGCLDDALKTFEFSGDKNSITWSAMITGYAQAGDS 363
H LA K GL+S VSV NALVTMY KCG LDDAL+TF+ SGDKNSITWSAMITG+AQ+GDS
Sbjct: 241 HSLAVKIGLISFVSVENALVTMYAKCGSLDDALRTFKTSGDKNSITWSAMITGFAQSGDS 300
Query: 364 HEALKLFSYMHFNGNKPSEFTFVGVINACSDIGALKEGKQMHGYSLKMGYESQIYIMTAL 423
+AL LFS+MHF+G PSEFTFVGVINACSDIGAL+EGKQMH YSLK+G+E QIYIMTAL
Sbjct: 301 QKALDLFSHMHFSGVMPSEFTFVGVINACSDIGALEEGKQMHSYSLKLGFEFQIYIMTAL 360
Query: 424 VDMYAKCGSLVDARNGFDYLKEPDIVLWTSMIGGYAQNGENETALTLYCRMQMEGILPNE 483
VDMYAKCG++ DAR GFDYL+EPDIVLWTSMIGGY QNGENE +LTLYCRMQ EG++PNE
Sbjct: 361 VDMYAKCGNVSDARKGFDYLREPDIVLWTSMIGGYVQNGENEASLTLYCRMQREGMMPNE 420
Query: 484 LTMASVLRACSSLAALEQGKQIHARTIKYGFNLEVPIGSALSTMYAKCGSLEDGNLVFRR 543
LTMASVL+ACSSL+A EQG+QIHARTIKYGF+LEVPIGSALSTMYAKCG+LEDGNLVFRR
Sbjct: 421 LTMASVLKACSSLSAFEQGRQIHARTIKYGFSLEVPIGSALSTMYAKCGNLEDGNLVFRR 480
Query: 544 MPTRDILSWNAMISGLSQNGEGFKALELFEEMRQGTTKPDYVTFVNILSACSHMGLVERG 603
MP RD +SWNAMISGLSQNG G +ALELFEEMR KPDY+TFVNILSACSHMGLVERG
Sbjct: 481 MPMRDTVSWNAMISGLSQNGRGTEALELFEEMRLEGAKPDYITFVNILSACSHMGLVERG 540
Query: 604 KVYFKMMRDEFGIVPRVEHYACMVDILSRAGKLQEAKEFIESVTIDHGMYLWRILLGACR 663
+YF MM +EFGI PRV+HYACMVD+LSRAGKL EAKEFIES TIDHGM LWRILL ACR
Sbjct: 541 WIYFNMMSNEFGIGPRVDHYACMVDVLSRAGKLDEAKEFIESATIDHGMCLWRILLSACR 600
Query: 664 NYRNYELGAYAGEKLMELGSEESSAYVLLSSIYAALGRSDDVERVRRVMKLRGVNKDPGC 723
NY NYELGAY GEKLMELGS+ESSAYVLLSSIY ALG S DVERVR +MKLRGV+K+PGC
Sbjct: 601 NYHNYELGAYVGEKLMELGSQESSAYVLLSSIYTALGSSKDVERVRSLMKLRGVSKEPGC 660
Query: 724 SWIELKSQVHVFVVGDQIHPQIVNIRSELRRLRKHMKDECYE 762
SWIELKSQVHVFVVGD++HPQI N+R E+RRL KHMKD+ Y+
Sbjct: 661 SWIELKSQVHVFVVGDEMHPQIENVRHEIRRLMKHMKDKDYQ 702
BLAST of ClCG08G013940 vs. NCBI nr
Match:
gi|225459793|ref|XP_002284799.1| (PREDICTED: pentatricopeptide repeat-containing protein At2g33680 [Vitis vinifera])
HSP 1 Score: 1081.2 bits (2795), Expect = 0.0e+00
Identity = 542/699 (77.54%), Postives = 607/699 (86.84%), Query Frame = 1
Query: 68 LVLPQHRSFFNLLLRYTHQKDLQKGKAIHAQLLRTGSFSSVYLTNSLVNLYAKCGSLVKA 127
+ LP +RSFF LL+YTH + LQKGKA+HAQ++++ S S VY+ NSLVNLYAKC L +A
Sbjct: 1 MTLPSNRSFFTALLQYTHNRSLQKGKALHAQIIKSSS-SCVYIANSLVNLYAKCQRLREA 60
Query: 128 KLVFESITNKDVVSWNCLINAYSQQGPVGCSFVMELFQRMRAENTLPNAHTFAGVFTAAS 187
K VFE I NKDVVSWNC+IN YSQ GP G S VMELFQRMRAENT PNAHTFAGVFTAAS
Sbjct: 61 KFVFERIQNKDVVSWNCIINGYSQHGPSGSSHVMELFQRMRAENTAPNAHTFAGVFTAAS 120
Query: 188 SSLETFGGLQAHALAIKTSSFYDVFVGSSLLNMYCKIGCLLDARKVFDRIPERNSVSWST 247
+ ++ GG AHA+AIK S DVFVGSSL+NMYCK G +ARKVFD +PERNSVSW+T
Sbjct: 121 TLVDAAGGRLAHAVAIKMDSCRDVFVGSSLMNMYCKAGLTPEARKVFDTMPERNSVSWAT 180
Query: 248 MISGYAMERMASEAWELFLLLRREEGIHNEFIYTGVLSALTVPELVHYGKQIHCLAFKNG 307
MISGYA +++A+EA LF L+RREE NEF++T VLSALT+PELV+ GKQIHC+A KNG
Sbjct: 181 MISGYASQKLAAEALGLFRLMRREEEGENEFVFTSVLSALTLPELVNNGKQIHCIAVKNG 240
Query: 308 LLSIVSVGNALVTMYGKCGCLDDALKTFEFSGDKNSITWSAMITGYAQAGDSHEALKLFS 367
LLSIVSVGNALVTMY KCG LDDAL+TFE S DKNSITWSAMITGYAQ+GDS +ALKLFS
Sbjct: 241 LLSIVSVGNALVTMYAKCGSLDDALQTFETSSDKNSITWSAMITGYAQSGDSDKALKLFS 300
Query: 368 YMHFNGNKPSEFTFVGVINACSDIGALKEGKQMHGYSLKMGYESQIYIMTALVDMYAKCG 427
MH +G +PSEFTFVGVINACSD+GA EGKQ+H Y LK+G+ESQIY+MTALVDMYAKC
Sbjct: 301 SMHLSGIRPSEFTFVGVINACSDLGAAWEGKQVHDYLLKLGFESQIYVMTALVDMYAKCS 360
Query: 428 SLVDARNGFDYLKEPDIVLWTSMIGGYAQNGENETALTLYCRMQMEGILPNELTMASVLR 487
S+VDAR GFDYL+EPDIVLWTSMIGGY QNGENE AL+LY RM+MEGILPNELTMASVL+
Sbjct: 361 SIVDARKGFDYLQEPDIVLWTSMIGGYVQNGENEDALSLYGRMEMEGILPNELTMASVLK 420
Query: 488 ACSSLAALEQGKQIHARTIKYGFNLEVPIGSALSTMYAKCGSLEDGNLVFRRMPTRDILS 547
ACSSLAALEQGKQIHART+KYGF LEVPIGSALSTMYAKCG L+DG LVFRRMP RD++S
Sbjct: 421 ACSSLAALEQGKQIHARTVKYGFGLEVPIGSALSTMYAKCGCLKDGTLVFRRMPARDVIS 480
Query: 548 WNAMISGLSQNGEGFKALELFEEMRQGTTKPDYVTFVNILSACSHMGLVERGKVYFKMMR 607
WNAMISGLSQNG G +ALELFEEM+ TKPDYVTFVNILSACSHMGLVERG YF+MM
Sbjct: 481 WNAMISGLSQNGCGKEALELFEEMQLEGTKPDYVTFVNILSACSHMGLVERGWGYFRMMF 540
Query: 608 DEFGIVPRVEHYACMVDILSRAGKLQEAKEFIESVTIDHGMYLWRILLGACRNYRNYELG 667
DEFG+ PRVEHYACMVDILSRAGKL+EA EF ES TIDHGM LWRI+LGACRNYRNYELG
Sbjct: 541 DEFGMDPRVEHYACMVDILSRAGKLKEAIEFTESATIDHGMCLWRIILGACRNYRNYELG 600
Query: 668 AYAGEKLMELGSEESSAYVLLSSIYAALGRSDDVERVRRVMKLRGVNKDPGCSWIELKSQ 727
AYAGEKLMELGS+ESSAYVLLSSIY+ALGR +DVERVRR+MKLRGV+K+PGCSWIELKS
Sbjct: 601 AYAGEKLMELGSQESSAYVLLSSIYSALGRWEDVERVRRMMKLRGVSKEPGCSWIELKSG 660
Query: 728 VHVFVVGDQIHPQIVNIRSELRRLRKHMKDECYESPDDT 767
VHVFVV DQ+HPQI +I ELR+L K MKDE YE D+
Sbjct: 661 VHVFVVKDQMHPQIGDIHVELRQLSKQMKDEGYEPATDS 698
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| PP181_ARATH | 1.8e-235 | 58.57 | Pentatricopeptide repeat-containing protein At2g33680 OS=Arabidopsis thaliana GN... | [more] |
| PP220_ARATH | 5.6e-133 | 38.38 | Pentatricopeptide repeat-containing protein At3g09040, mitochondrial OS=Arabidop... | [more] |
| PP307_ARATH | 3.2e-128 | 35.40 | Pentatricopeptide repeat-containing protein At4g13650 OS=Arabidopsis thaliana GN... | [more] |
| PP172_ARATH | 7.8e-127 | 37.19 | Pentatricopeptide repeat-containing protein At2g27610 OS=Arabidopsis thaliana GN... | [more] |
| PP151_ARATH | 3.3e-125 | 39.86 | Pentatricopeptide repeat-containing protein At2g13600 OS=Arabidopsis thaliana GN... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| A0A0A0LK41_CUCSA | 0.0e+00 | 86.81 | Uncharacterized protein OS=Cucumis sativus GN=Csa_2G348180 PE=4 SV=1 | [more] |
| E0CQU2_VITVI | 0.0e+00 | 77.54 | Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0001g00570 PE=4 SV=... | [more] |
| A0A067KKT6_JATCU | 1.9e-305 | 73.75 | Uncharacterized protein OS=Jatropha curcas GN=JCGZ_08147 PE=4 SV=1 | [more] |
| A0A061EFJ3_THECC | 1.9e-305 | 73.94 | Tetratricopeptide repeat-like superfamily protein OS=Theobroma cacao GN=TCM_0110... | [more] |
| B9R8H7_RICCO | 1.6e-304 | 74.25 | Pentatricopeptide repeat-containing protein, putative OS=Ricinus communis GN=RCO... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| AT2G33680.1 | 9.9e-237 | 58.57 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
| AT3G09040.1 | 3.2e-134 | 38.38 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
| AT4G13650.1 | 1.8e-129 | 35.40 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
| AT2G27610.1 | 4.4e-128 | 37.19 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
| AT2G13600.1 | 1.9e-126 | 39.86 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
