CmoCh12G002950 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh12G002950
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Location	Cmo_Chr12 : 1859945 .. 1862493 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexonthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCTCCAAATCCCTCTCTTCACCCATCCTCCTCCTCTCTCTCCTCCTCTGTTTATCCCTCTCCGCCGCCTCTCCCTGCAACCAGCCCAAAATCAAGCCGTCGCCAGCCAAAAAGAAACCGGCAAACCCCAAAATCATCCGCCCGCCGTCGTCATCTCCGGCAGTACAAACAGCTTACTGCCCAAAAGACACCGTGAAATTCAGTGTTTGTACCAACATTCTCGGAATCGGCAGCCTCATCGGAAGCCCTGTTTCGAGCAAATGCTGCGATTTGCTTGCTGGGTTGACGAATCTTGAGGCGGCGGCTTGTCTTTGCACTGCAATTAAAGCCAATGTTCTTGGAATTAACTTGGATGTTCCTGTTTCCTTTAGCTTGCTGGTTAGCTCTTGCAAGAAATCTGTGCCTGCTGGGTACCGGTGTAAATGAAGCAGATAAGAACACTGTGATGGAACCTTCTGGAAAGTTCGTGCTTTGTTTTGTGGATCTTGTTCGTTATTGTTCGTTGTTTTCGTTTATGTTCTTGTTTCATTTGGTCGTGTTTTTTCATGTTTCGTGGGTTTATTAAATGTTCTTTTTCCCCTCTTGATTTCACTCGTCATTACTCTCGTTCAGTGTTAATAAATTTGTGGACTTCTTTCCATCAAATTCGTTCGATTTCTCGTTTTGCACGTGTATATCGTTACTTTAAATGTAGAGTAATATACGTTTAGACACTTAACGTCGATAATGTCGGTTAGGAAGAGCTTTCCCCACTCTTATAAAAACATGTTTGGTTCCTCTTTACTGATGTGGATCTCACCACCCACAATCTTCGTTTCTCTCTCTAACTGGTGTGGATCTCACCATCCACCGTCTTTGCTAGCTCACCCCCCAGTGTCTAGCTCTATTACCATTTGTAACGGCCCAAACTCACCTCTAGCAGACATTTAACGTCGATAATATTTGTAACAGCTCAAACTCACCACTAGTAGAAATTGTTTGTTTTAACTCATTACGTATTATCGTTAGTCTTACAGTATTAAAAATGCGTATCTTAAGAAAAGGTTTCCACCCCTTTTATAAGGAATGCTTCGTTCCCCTCCTTAACCGATGTGGAATCTCATAACCTACCTCCCCTGGGGCCAGTGTTCTTGCTAGCACACCGCCCAGTATCTGGCTCTGATACCATTTGTAACAGCTCAAGCCCATCATTAGCAGATATTGTCTGCTTTTGTTCCTTACGTATCGTCATCAGCCTCACGATTTTAAAACGTATCTGTTAGAGAATTTTCTACACTTTTATAAGAAATTATTCGTTCCCTCTCCAACTAATATAGGATCTCACAATATCTCATAACCTACCTCCCCAACCGATGTGGGATCTCAAAACCTACCTCCCTTGGGGGCACAGTGGTTTGGCACACCGCTCGATGTCTGGCTCTGATACCACTTGTAACAGCTCAAGCTCACTATTAGCAAATATTGTCTGCTTTGGTTTGTTATATATCATCGTCAGCCTCACGATTTTAAAACGTTTCTGTTAGAGAGAAGTTTCCACGCTTTTATAAGAAATGATTCGTTTCTCTCTCCAATTAATATAGGATCTTACAGTACCTCAACGTTAACAGCATACATTCAAACCTATGGTCATTTCGTTGAAAAGCTAGTTGTAAAGGTCCAAAGGCTCAGGCTAGTTGCAAAAGTGTCTTGACTCCACATTGGCGTTGAGATGCCATCCTCTCCGGATTTGAGTCAAATCATCATTTTCTCGACTTAATTGTTCAATTTTAATTTTGATTATCCAAAACGCTTCAATTAACATCAAGTTGATTGATCGTTATTAAATAGGCAAATAAGAACATGAGTAAGGATATTAACATGAAATTAGACACATAAATAGAATGTTTTAGGTGATATCATTAATGTCAACTTCTCCCAGTAACACGTTTTAGTGATTTTGTTTCTATTTTCTACCATGATCAGCTAGATCTCTCTCAATTTGTTCATGATGAACCCTATATAGTAACTTTATTGGATTAAATCATGAACATAGGCTCTTTACAATACGATTCGAACCTGTTACCCGAATATCATACAAAAATCCCATAGAAAAAGCGAATGTTCGCGGCAAATCGGAATCGCGGCTTTATCTCGCCTCCCTGTTTACGATATAGGTCTTCCCCGCCATATCTGCCGTCTGCGATTCTCTTGTGATTCCTCGTTGAATCACCGATTTGATTACCTCGATTAGGGGAAATTAGGGGAGAAATTTCCAGATTGATCGCCTTCGCCGCTGCCGTAGGGAATCGATTGGAGCCCTCCTCCTCGAAAATCGGTATATTCTAAACATCTTGATCTTCGCTAGTGTTTGTTTTAAGATTATTGTACGCTTTTTTGCTTTTTCTGTTTCTGATTTGATATGATATAGCTTTCGTTGGAAGTTTGGTGGATTTTTGTTTTCTGTGTTCATAATGGATGCGGCACTATTTGGCCATAGGATGCTCACATGGAGTGACGTTAGGGTATGACAAGACAATGCCATCTTAGGCTTCTTTCCAAAATCATCG

mRNA sequence

ATGGCCTCCAAATCCCTCTCTTCACCCATCCTCCTCCTCTCTCTCCTCCTCTGTTTATCCCTCTCCGCCGCCTCTCCCTGCAACCAGCCCAAAATCAAGCCGTCGCCAGCCAAAAAGAAACCGGCAAACCCCAAAATCATCCGCCCGCCGTCGTCATCTCCGGCAGTACAAACAGCTTACTGCCCAAAAGACACCGTGAAATTCAGTGTTTGTACCAACATTCTCGGAATCGGCAGCCTCATCGGAAGCCCTGTTTCGAGCAAATGCTGCGATTTGCTTGCTGGGTTGACGAATCTTGAGGCGGCGGCTTGTCTTTGCACTGCAATTAAAGCCAATGTTCTTGGAATTAACTTGGATGTTCCTGTTTCCTTTAGCTTGCTGGTTAGCTCTTGCAAGAAATCTGTGCCTGCTGGTTCGTGCTTTGTTTTGTGGATCTTGTTCGTTATTGTTCGTTGTTTTCGTTTATGTTCTTGTTTCATTTGGTCGTGTTTTTTCATGTTTCGTGGGTTTATTAAATGTTCTTTTTCCCCTCTTGATTTCACTCGTCATTACTCTCGTTCAGTGTTAATAAATTTGTGGACTTCTTTCCATCAAATTCGTTCGATTTCTCGTTTTGCACGTGCTCTTTACAATACGATTCGAACCTGTTACCCGAATATCATACAAAAATCCCATAGAAAAAGCGAATGTTCGCGGCAAATCGGAATCGCGGCTTTATCTCGCCTCCCTGTTTACGATATAGGGGAAATTAGGGGAGAAATTTCCAGATTGATCGCCTTCGCCGCTGCCGTAGGGAATCGATTGGAGCCCTCCTCCTCGAAAATCGGATGCTCACATGGAGTGACGTTAGGGTATGACAAGACAATGCCATCTTAGGCTTCTTTCCAAAATCATCG

Coding sequence (CDS)

ATGGCCTCCAAATCCCTCTCTTCACCCATCCTCCTCCTCTCTCTCCTCCTCTGTTTATCCCTCTCCGCCGCCTCTCCCTGCAACCAGCCCAAAATCAAGCCGTCGCCAGCCAAAAAGAAACCGGCAAACCCCAAAATCATCCGCCCGCCGTCGTCATCTCCGGCAGTACAAACAGCTTACTGCCCAAAAGACACCGTGAAATTCAGTGTTTGTACCAACATTCTCGGAATCGGCAGCCTCATCGGAAGCCCTGTTTCGAGCAAATGCTGCGATTTGCTTGCTGGGTTGACGAATCTTGAGGCGGCGGCTTGTCTTTGCACTGCAATTAAAGCCAATGTTCTTGGAATTAACTTGGATGTTCCTGTTTCCTTTAGCTTGCTGGTTAGCTCTTGCAAGAAATCTGTGCCTGCTGGTTCGTGCTTTGTTTTGTGGATCTTGTTCGTTATTGTTCGTTGTTTTCGTTTATGTTCTTGTTTCATTTGGTCGTGTTTTTTCATGTTTCGTGGGTTTATTAAATGTTCTTTTTCCCCTCTTGATTTCACTCGTCATTACTCTCGTTCAGTGTTAATAAATTTGTGGACTTCTTTCCATCAAATTCGTTCGATTTCTCGTTTTGCACGTGCTCTTTACAATACGATTCGAACCTGTTACCCGAATATCATACAAAAATCCCATAGAAAAAGCGAATGTTCGCGGCAAATCGGAATCGCGGCTTTATCTCGCCTCCCTGTTTACGATATAGGGGAAATTAGGGGAGAAATTTCCAGATTGATCGCCTTCGCCGCTGCCGTAGGGAATCGATTGGAGCCCTCCTCCTCGAAAATCGGATGCTCACATGGAGTGACGTTAGGGTATGACAAGACAATGCCATCTTAG

Homology

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BLAST of CmoCh12G002950 vs. Swiss-Prot
Match: ERLL1_ARATH (pEARLI1-like lipid transfer protein 1 OS=Arabidopsis thaliana GN=AZI1 PE=1 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 3.5e-19
Identity = 64/158 (40.51%), Postives = 94/158 (59.49%), Query Frame = 1


Query: 1   MASKSLSSPILLLSL-LLCLSLSAASPCN---QPKIKPSPAKK-KPA------------- 60
           MASK+ +S  L  +L +L  +L+ A+ CN    PK KP P+ K KP              
Sbjct: 1   MASKNSASLALFFALNILFFTLTVATNCNCKPSPKPKPVPSPKPKPVQCPPPPRPSVPSP 60

Query: 61  NPKIIRPPSSSPAVQTAYCPKDTVKFSVCTNILG--IGSLIGSPVSSKCCDLLAGLTNLE 120
           NP+ + PP + P      CP D +K  VC N+L   +   +G P S +CC L+ GL +++
Sbjct: 61  NPRPVTPPRT-PGSSGNSCPIDALKLGVCANVLSSLLNIQLGQPSSQQCCSLIQGLVDVD 120

Query: 121 AAACLCTAIKANVLGINLDVPVSFSLLVSSCKKSVPAG 139
           AA CLCTA++ANVLGINL+VP+S S+L++ C + +P+G
Sbjct: 121 AAICLCTALRANVLGINLNVPISLSVLLNVCNRKLPSG 157

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BLAST of CmoCh12G002950 vs. Swiss-Prot
Match: 14KD_DAUCA (14 kDa proline-rich protein DC2.15 OS=Daucus carota PE=2 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 7.8e-19
Identity = 60/143 (41.96%), Postives = 84/143 (58.74%), Query Frame = 1


Query: 1   MASKSLSSPILL--LSLLLCLSLSAASPCNQP-KIKPSPAKKKPANPKIIRPPSSSPAVQ 60
           M SK+ +S  L   L++L    +S+   C  P K KP P  K          P+ +P   
Sbjct: 1   MGSKNSASVALFFTLNILFFALVSSTEKCPDPYKPKPKPTPK----------PTPTPYPS 60

Query: 61  TAYCPKDTVKFSVCTNILGI--GSLIGSPVSSKCCDLLAGLTNLEAAACLCTAIKANVLG 120
              CP+D +K  VC ++L +    +IGSP +  CC LL GL NLEAA CLCTAIKAN+LG
Sbjct: 61  AGKCPRDALKLGVCADVLNLVHNVVIGSPPTLPCCSLLEGLVNLEAAVCLCTAIKANILG 120

Query: 121 INLDVPVSFSLLVSSCKKSVPAG 139
            NL++P++ SL++++C K VP G
Sbjct: 121 KNLNLPIALSLVLNNCGKQVPNG 133

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BLAST of CmoCh12G002950 vs. Swiss-Prot
Match: ERLI1_ARATH (Lipid transfer protein EARLI 1 OS=Arabidopsis thaliana GN=EARLI1 PE=1 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 1.5e-17
Identity = 65/164 (39.63%), Postives = 95/164 (57.93%), Query Frame = 1


Query: 1   MASKSLSSPILLLSL-LLCLSLSAASPCN---QPKIKPSPAKK-KPA---NPKIIRPPS- 60
           MASK+ +S  L  +L ++  +L+AA+ C     PK KP P+ K KP     PK +  PS 
Sbjct: 1   MASKNSASIALFFALNIIFFTLTAATDCGCNPSPKHKPVPSPKPKPVPSPKPKPVPSPSV 60

Query: 61  SSPAV---------------QTAYCPKDTVKFSVCTNILG--IGSLIGSPVSSKCCDLLA 120
            SP+V                +  CP D ++  VC N+L   +   +G P +  CC L+ 
Sbjct: 61  PSPSVPSPNPRPVTPPRTPGSSGNCPIDALRLGVCANVLSSLLNIQLGQPSAQPCCSLIQ 120

Query: 121 GLTNLEAAACLCTAIKANVLGINLDVPVSFSLLVSSCKKSVPAG 139
           GL +L+AA CLCTA++ANVLGINL+VP+S S+L++ C + VP+G
Sbjct: 121 GLVDLDAAICLCTALRANVLGINLNVPISLSVLLNVCNRKVPSG 164

[Close]

BLAST of CmoCh12G002950 vs. Swiss-Prot
Match: ERLL2_ARATH (pEARLI1-like lipid transfer protein 2 OS=Arabidopsis thaliana GN=At4g12490 PE=2 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 1.8e-15
Identity = 48/118 (40.68%), Postives = 71/118 (60.17%), Query Frame = 1


Query: 22  SAASPCNQPKIKPSPAKKKPANPKIIRPPSSSPAVQTAYCPKDTVKFSVCTNILG--IGS 81
           S  SP       PSP+   P NP  + PP +  +  +  CP D ++  VC N+L   +  
Sbjct: 63  SVPSPSVPTPSVPSPSVPSP-NPTPVIPPRTPGS--SGNCPIDALRLGVCANVLSGLLNV 122

Query: 82  LIGSPVSSKCCDLLAGLTNLEAAACLCTAIKANVLGINLDVPVSFSLLVSSCKKSVPA 138
            +G P    CC L+ GL +L+AA CLCTA++ANVLGINL+VP+S S+L++ C + +P+
Sbjct: 123 QLGQPSPQPCCSLIQGLVDLDAAVCLCTALRANVLGINLNVPISLSVLLNVCNRRLPS 177

[Close]

BLAST of CmoCh12G002950 vs. Swiss-Prot
Match: LBP65_ARATH (Putative lipid-binding protein At4g00165 OS=Arabidopsis thaliana GN=At4g00165 PE=2 SV=1)

HSP 1 Score: 84.3 bits (207), Expect = 2.3e-15
Identity = 56/138 (40.58%), Postives = 83/138 (60.14%), Query Frame = 1


Query: 3   SKSLSSPILLLSLLLCLSLSAASPCNQPKIKPSPAKKKPANPKIIRPPSSSPAVQTAYCP 62
           SK+L S ++LL L +       +P     +KP P            PP +  A  T  CP
Sbjct: 4   SKALRSLLILLLLNITFFFGHVTP--GATVKPCP------------PPPAKQA--TTKCP 63

Query: 63  KDTVKFSVCTNILGIGS-LIGSPVSSKCCDLLAGLTNLEAAACLCTAIKANVLGI-NLDV 122
           +DT+KF VC + LG+ S +IG+P S +CC L+ GL + EAA CLCTA+K ++LG+  + +
Sbjct: 64  RDTLKFGVCGSWLGLVSEVIGTPPSQECCSLIKGLADFEAAVCLCTALKTSILGVAPVKI 123

Query: 123 PVSFSLLVSSCKKSVPAG 139
           PV+ +LL++SC K+VP G
Sbjct: 124 PVALTLLLNSCGKNVPQG 125

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BLAST of CmoCh12G002950 vs. TrEMBL
Match: A0A0A0LPN2_CUCSA (Proline-rich protein DC2.15 OS=Cucumis sativus GN=Csa_2G381890 PE=4 SV=1)

HSP 1 Score: 181.4 bits (459), Expect = 1.6e-42
Identity = 104/143 (72.73%), Postives = 125/143 (87.41%), Query Frame = 1


Query: 1   MASKSLSSP-ILLLSLLLCLSLSAASPCNQPKIKPSPA--KKKPANPKIIRPPS-SSPAV 60
           MASKSLS P ILLLSLLLC +L  A+PC+QPK KP+P+  KKKPA PKIIRPP+ SSPAV
Sbjct: 1   MASKSLSLPTILLLSLLLCSAL--ATPCDQPKTKPAPSVPKKKPAIPKIIRPPAASSPAV 60

Query: 61  QTAYCPKDTVKFSVCTNILGIGS-LIGSPVSSKCCDLLAGLTNLEAAACLCTAIKANVLG 120
           Q++YCPKDT+K  VC +ILGIGS +IGSPVS+ CC LL+GLT++EAAACLCTAIKANVLG
Sbjct: 61  QSSYCPKDTLKLGVCADILGIGSTVIGSPVSNNCCALLSGLTDVEAAACLCTAIKANVLG 120

Query: 121 INLDVPVSFSLLVSSCKKSVPAG 139
           INL++PVS SLL+SSC+K++P G
Sbjct: 121 INLNIPVSISLLISSCQKTLPDG 141

[Close]

BLAST of CmoCh12G002950 vs. TrEMBL
Match: A0A061GJ47_THECC (Bimodular protein OS=Theobroma cacao GN=TCM_036975 PE=4 SV=1)

HSP 1 Score: 126.3 bits (316), Expect = 6.0e-26
Identity = 74/139 (53.24%), Postives = 99/139 (71.22%), Query Frame = 1


Query: 1   MASKSLSSPILLLSLLLCLSLSAASPCNQPKIKPSPAKKKPANPKIIRPPSSSPAVQTAY 60
           MASK + +  L+ SLLL  + ++A  CN  K KP+P    P +P    PPSS        
Sbjct: 1   MASKQICALFLVFSLLLHSTFTSA--CNSCKPKPTPTPPPPPSPACPPPPSS-------- 60

Query: 61  CPKDTVKFSVCTNILGIGSLI-GSPVSSKCCDLLAGLTNLEAAACLCTAIKANVLGINLD 120
           CPKDT+K  VC ++LG+ +++ GSP SSKCC LL+GL +LEAA CLCTAIKA+VLGINL+
Sbjct: 61  CPKDTLKLGVCADLLGLVNIVVGSPPSSKCCALLSGLADLEAALCLCTAIKASVLGINLN 120

Query: 121 VPVSFSLLVSSCKKSVPAG 139
           +PVS SL++S+C+K+VPAG
Sbjct: 121 IPVSLSLILSACQKNVPAG 129

[Close]

BLAST of CmoCh12G002950 vs. TrEMBL
Match: F6H3H9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_04s0008g05640 PE=4 SV=1)

HSP 1 Score: 124.4 bits (311), Expect = 2.3e-25
Identity = 78/141 (55.32%), Postives = 98/141 (69.50%), Query Frame = 1


Query: 1   MASKSLSSPILLLSLLLCLSLSAA-SPCNQPKIKPSPAKKKPANPKIIRPPSSSPAVQTA 60
           MAS +LS+ IL+LSLLL  + S+A  PC QPK  P PAK  PANP               
Sbjct: 1   MASNNLSAAILVLSLLLFSTFSSACGPC-QPKPTP-PAKAPPANP--------------- 60

Query: 61  YCPKDTVKFSVCTNILG--IGSLIGSPVSSKCCDLLAGLTNLEAAACLCTAIKANVLGIN 120
           +CP+DT+KF VC ++LG  +  + GSP SSKCC +L GL +LEAAACLCTAIKA+VLGIN
Sbjct: 61  FCPRDTLKFGVCADLLGGLVSLVAGSPPSSKCCAVLEGLADLEAAACLCTAIKASVLGIN 120

Query: 121 LDVPVSFSLLVSSCKKSVPAG 139
           + VPV+ SLL+S+C KS+P G
Sbjct: 121 VKVPVAISLLISACGKSIPPG 124

[Close]

BLAST of CmoCh12G002950 vs. TrEMBL
Match: G7I725_MEDTR (Protease inhibitor/seed storage/LTP family protein OS=Medicago truncatula GN=MTR_1g012710 PE=2 SV=1)

HSP 1 Score: 122.5 bits (306), Expect = 8.6e-25
Identity = 73/147 (49.66%), Postives = 99/147 (67.35%), Query Frame = 1


Query: 1   MASKSLSSPILLLSLLLCLSLSAA------SPCNQPKIKPSPAKKKPANPKIIRPPSSSP 60
           MAS  LS+ I+L SLL   + S A      +P  +PK KP P+   P++      PS++P
Sbjct: 1   MASNKLSALIILFSLLAYSTFSHACGSCKPTPSPKPKPKPKPSPPPPSSTPCPPTPSTTP 60

Query: 61  AVQTAY--CPKDTVKFSVCTNILG-IGSLIGSPVSSKCCDLLAGLTNLEAAACLCTAIKA 120
              +    CP DT+K  VC ++LG +  ++GSP SSKCC LL GL +L+AA CLCTAIKA
Sbjct: 61  PTPSTSQKCPSDTLKLGVCADVLGLVNVIVGSPASSKCCALLQGLVDLDAAICLCTAIKA 120

Query: 121 NVLGINLDVPVSFSLLVSSCKKSVPAG 139
           NVLGINL+VP++ SLL+S+C+KSVP+G
Sbjct: 121 NVLGINLNVPITLSLLLSACEKSVPSG 147

[Close]

BLAST of CmoCh12G002950 vs. TrEMBL
Match: P93512_BRANA (Proline-rich SAC51 protein OS=Brassica napus GN=proline-rich SAC51 PE=2 SV=1)

HSP 1 Score: 119.4 bits (298), Expect = 7.3e-24
Identity = 65/140 (46.43%), Postives = 90/140 (64.29%), Query Frame = 1


Query: 3   SKSLSSPILLLSLLLCLSLSAASPCN--QPKIKPSPAKKKPANPKIIRPPSSSPAVQTAY 62
           +KS  +  L+L++L C ++SA   C    PK KP P+ K   NPK    P+ +P+  TA 
Sbjct: 5   TKSFLAIFLILNILFCTTISAYGNCGCPSPKPKPDPSHKPKPNPKPKPTPTPTPSPVTAK 64

Query: 63  CPKDTVKFSVCTNILG--IGSLIGSPVSSKCCDLLAGLTNLEAAACLCTAIKANVLGINL 122
           CP+D +K  VC N+L   +   +G P    CC L+ GL +LEAAACLCTA+KAN+LGINL
Sbjct: 65  CPRDALKLGVCANVLSGLLNITLGKPPVKPCCTLIKGLADLEAAACLCTALKANILGINL 124

Query: 123 DVPVSFSLLVSSCKKSVPAG 139
           ++P+S SLL++ C K VP G
Sbjct: 125 NIPISLSLLLNVCSKKVPPG 144

[Close]

BLAST of CmoCh12G002950 vs. TAIR10
Match: AT1G62510.1 (AT1G62510.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 112.5 bits (280), Expect = 4.5e-25
Identity = 67/146 (45.89%), Postives = 90/146 (61.64%), Query Frame = 1


Query: 1   MASKSLSSP--ILLLSLLLCLSLSAASPCN----QPKIKPSPAKKKPANPKIIRPPSSSP 60
           MAS++  S    L+L+ L   ++SA   C     +PK KPSP+ K   NPK    P  SP
Sbjct: 1   MASRTTKSLALFLILNFLFFTTISACGNCGCPSPKPKHKPSPSPKPKPNPKPKPTPHPSP 60

Query: 61  AVQTAYCPKDTVKFSVCTNILG--IGSLIGSPVSSKCCDLLAGLTNLEAAACLCTAIKAN 120
           +   A CP+D +K  VC N+L   +   +G P    CC L+ GL +LEAAACLCTA+KAN
Sbjct: 61  SPAIAKCPRDALKLGVCANVLNGLLNVTLGKPPVEPCCTLIQGLADLEAAACLCTALKAN 120

Query: 121 VLGINLDVPVSFSLLVSSCKKSVPAG 139
           +LGINL++P+S SLL++ C K VP G
Sbjct: 121 ILGINLNIPLSLSLLLNVCSKKVPRG 146

[Close]

BLAST of CmoCh12G002950 vs. TAIR10
Match: AT2G45180.1 (AT2G45180.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 105.1 bits (261), Expect = 7.2e-23
Identity = 66/140 (47.14%), Postives = 89/140 (63.57%), Query Frame = 1


Query: 1   MASKSLSSPILLLSL-LLCLSLSAASPCNQPKIKPSPAKKKPANPKIIRPPSSSPAVQTA 60
           MASK+L+   LL++L LL  +   ++ C  P   P P       PK  + P  +PAV+  
Sbjct: 1   MASKALAVTALLITLNLLFFTFVTSTKC--PPTTPKP-------PKTPKSPKKAPAVKPT 60

Query: 61  YCPKDTVKFSVCTNILG-IGSLIGSPVSSKCCDLLAGLTNLEAAACLCTAIKANVLGINL 120
            CP DT+K  VC ++LG +  ++GSP  + CC LL GL NLEAA CLCTA+KANVLGINL
Sbjct: 61  -CPTDTLKLGVCADLLGLVNVVVGSPPKTPCCTLLQGLANLEAAVCLCTALKANVLGINL 120

Query: 121 DVPVSFSLLVSSCKKSVPAG 139
           +VP+  +LL++ C K VP G
Sbjct: 121 NVPIDLTLLLNYCGKKVPHG 130

[Close]

BLAST of CmoCh12G002950 vs. TAIR10
Match: AT1G12090.1 (AT1G12090.1 extensin-like protein)

HSP 1 Score: 100.1 bits (248), Expect = 2.3e-21
Identity = 61/145 (42.07%), Postives = 85/145 (58.62%), Query Frame = 1


Query: 1   MASKSLSSPILLLSLLLCLSLSAASPCNQ-----PKIKPSPAKKKPANPKIIRPPSSSPA 60
           MAS S++   L L+LL   ++SA   C       P  KP P  K          P+ SP+
Sbjct: 1   MASSSIAL-FLALNLLFFTTISACGSCTPCGGGCPSPKPKPTPK----------PTPSPS 60

Query: 61  VQTAYCPKDTVKFSVCTNILG--IGSLIGSPVSSKCCDLLAGLTNLEAAACLCTAIKANV 120
             ++ CPKDT+K  VC N+L   +   +G P    CC L+ GL ++EAA CLCTA+KAN+
Sbjct: 61  SGSSKCPKDTLKLGVCANVLNGLLDLTLGKPPVEPCCSLIQGLADVEAAVCLCTALKANI 120

Query: 121 LGINLDVPVSFSLLVSSCKKSVPAG 139
           LGINL++P+S SLL++ C K +P G
Sbjct: 121 LGINLNLPISLSLLLNVCSKQLPPG 134

[Close]

BLAST of CmoCh12G002950 vs. TAIR10
Match: AT4G12470.1 (AT4G12470.1 azelaic acid induced 1)

HSP 1 Score: 97.1 bits (240), Expect = 2.0e-20
Identity = 64/158 (40.51%), Postives = 94/158 (59.49%), Query Frame = 1


Query: 1   MASKSLSSPILLLSL-LLCLSLSAASPCN---QPKIKPSPAKK-KPA------------- 60
           MASK+ +S  L  +L +L  +L+ A+ CN    PK KP P+ K KP              
Sbjct: 1   MASKNSASLALFFALNILFFTLTVATNCNCKPSPKPKPVPSPKPKPVQCPPPPRPSVPSP 60

Query: 61  NPKIIRPPSSSPAVQTAYCPKDTVKFSVCTNILG--IGSLIGSPVSSKCCDLLAGLTNLE 120
           NP+ + PP + P      CP D +K  VC N+L   +   +G P S +CC L+ GL +++
Sbjct: 61  NPRPVTPPRT-PGSSGNSCPIDALKLGVCANVLSSLLNIQLGQPSSQQCCSLIQGLVDVD 120

Query: 121 AAACLCTAIKANVLGINLDVPVSFSLLVSSCKKSVPAG 139
           AA CLCTA++ANVLGINL+VP+S S+L++ C + +P+G
Sbjct: 121 AAICLCTALRANVLGINLNVPISLSVLLNVCNRKLPSG 157

[Close]

BLAST of CmoCh12G002950 vs. TAIR10
Match: AT4G12510.1 (AT4G12510.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 94.4 bits (233), Expect = 1.3e-19
Identity = 63/144 (43.75%), Postives = 81/144 (56.25%), Query Frame = 1


Query: 1   MASKSLSSPILLLS---LLLCLSLSAASPCNQ-PKIKPSPAKKKPANPKIIRPPSSSPAV 60
           MASK  +S ++ L+   L   L+ +    C+  PK KP P                    
Sbjct: 1   MASKISASLVIFLTFNILFFTLTTACGGGCSSTPKPKPKPKS------------------ 60

Query: 61  QTAYCPKDTVKFSVCTNILG--IGSLIGSPVSSKCCDLLAGLTNLEAAACLCTAIKANVL 120
            T  CPKDT+K  VC N+L   +   +G+P    CC LL GL +LEAAACLCTA+KA VL
Sbjct: 61  -TGSCPKDTLKLGVCANVLKDLLKIQLGTPPVKPCCSLLNGLVDLEAAACLCTALKAKVL 120

Query: 121 GINLDVPVSFSLLVSSCKKSVPAG 139
           GINL+VPVS SLL++ C K VP+G
Sbjct: 121 GINLNVPVSLSLLLNVCGKKVPSG 125

[Close]

BLAST of CmoCh12G002950 vs. NCBI nr
Match: gi|659088926|ref|XP_008445235.1| (PREDICTED: pEARLI1-like lipid transfer protein 1 [Cucumis melo])

HSP 1 Score: 186.0 bits (471), Expect = 9.1e-44
Identity = 106/143 (74.13%), Postives = 127/143 (88.81%), Query Frame = 1


Query: 1   MASKSLSSP-ILLLSLLLCLSLSAASPCNQPKIKPSPA--KKKPANPKIIRPPS-SSPAV 60
           MASKSLS P ILLLSLLLC +L  A+PC+QPK KP+P+  KKKPA PKIIRPP+ SSPAV
Sbjct: 1   MASKSLSLPTILLLSLLLCSAL--ATPCDQPKTKPAPSVPKKKPAIPKIIRPPAASSPAV 60

Query: 61  QTAYCPKDTVKFSVCTNILGIGSL-IGSPVSSKCCDLLAGLTNLEAAACLCTAIKANVLG 120
           Q++YCPKDT+K  VC +ILGIGS+ IGSPVS++CC LL+GLT++EAAACLCTAIKANVLG
Sbjct: 61  QSSYCPKDTLKLGVCADILGIGSVVIGSPVSNECCALLSGLTDVEAAACLCTAIKANVLG 120

Query: 121 INLDVPVSFSLLVSSCKKSVPAG 139
           INLD+PVS SLL+SSC+K++PAG
Sbjct: 121 INLDIPVSLSLLISSCQKTLPAG 141

[Close]

BLAST of CmoCh12G002950 vs. NCBI nr
Match: gi|449441902|ref|XP_004138721.1| (PREDICTED: pEARLI1-like lipid transfer protein 1 [Cucumis sativus])

HSP 1 Score: 181.4 bits (459), Expect = 2.2e-42
Identity = 104/143 (72.73%), Postives = 125/143 (87.41%), Query Frame = 1


Query: 1   MASKSLSSP-ILLLSLLLCLSLSAASPCNQPKIKPSPA--KKKPANPKIIRPPS-SSPAV 60
           MASKSLS P ILLLSLLLC +L  A+PC+QPK KP+P+  KKKPA PKIIRPP+ SSPAV
Sbjct: 1   MASKSLSLPTILLLSLLLCSAL--ATPCDQPKTKPAPSVPKKKPAIPKIIRPPAASSPAV 60

Query: 61  QTAYCPKDTVKFSVCTNILGIGS-LIGSPVSSKCCDLLAGLTNLEAAACLCTAIKANVLG 120
           Q++YCPKDT+K  VC +ILGIGS +IGSPVS+ CC LL+GLT++EAAACLCTAIKANVLG
Sbjct: 61  QSSYCPKDTLKLGVCADILGIGSTVIGSPVSNNCCALLSGLTDVEAAACLCTAIKANVLG 120

Query: 121 INLDVPVSFSLLVSSCKKSVPAG 139
           INL++PVS SLL+SSC+K++P G
Sbjct: 121 INLNIPVSISLLISSCQKTLPDG 141

[Close]

BLAST of CmoCh12G002950 vs. NCBI nr
Match: gi|590572334|ref|XP_007011824.1| (Bimodular protein [Theobroma cacao])

HSP 1 Score: 126.3 bits (316), Expect = 8.6e-26
Identity = 74/139 (53.24%), Postives = 99/139 (71.22%), Query Frame = 1


Query: 1   MASKSLSSPILLLSLLLCLSLSAASPCNQPKIKPSPAKKKPANPKIIRPPSSSPAVQTAY 60
           MASK + +  L+ SLLL  + ++A  CN  K KP+P    P +P    PPSS        
Sbjct: 1   MASKQICALFLVFSLLLHSTFTSA--CNSCKPKPTPTPPPPPSPACPPPPSS-------- 60

Query: 61  CPKDTVKFSVCTNILGIGSLI-GSPVSSKCCDLLAGLTNLEAAACLCTAIKANVLGINLD 120
           CPKDT+K  VC ++LG+ +++ GSP SSKCC LL+GL +LEAA CLCTAIKA+VLGINL+
Sbjct: 61  CPKDTLKLGVCADLLGLVNIVVGSPPSSKCCALLSGLADLEAALCLCTAIKASVLGINLN 120

Query: 121 VPVSFSLLVSSCKKSVPAG 139
           +PVS SL++S+C+K+VPAG
Sbjct: 121 IPVSLSLILSACQKNVPAG 129

[Close]

BLAST of CmoCh12G002950 vs. NCBI nr
Match: gi|225430322|ref|XP_002285197.1| (PREDICTED: putative lipid-binding protein At4g00165 [Vitis vinifera])

HSP 1 Score: 124.4 bits (311), Expect = 3.3e-25
Identity = 78/141 (55.32%), Postives = 98/141 (69.50%), Query Frame = 1


Query: 1   MASKSLSSPILLLSLLLCLSLSAA-SPCNQPKIKPSPAKKKPANPKIIRPPSSSPAVQTA 60
           MAS +LS+ IL+LSLLL  + S+A  PC QPK  P PAK  PANP               
Sbjct: 1   MASNNLSAAILVLSLLLFSTFSSACGPC-QPKPTP-PAKAPPANP--------------- 60

Query: 61  YCPKDTVKFSVCTNILG--IGSLIGSPVSSKCCDLLAGLTNLEAAACLCTAIKANVLGIN 120
           +CP+DT+KF VC ++LG  +  + GSP SSKCC +L GL +LEAAACLCTAIKA+VLGIN
Sbjct: 61  FCPRDTLKFGVCADLLGGLVSLVAGSPPSSKCCAVLEGLADLEAAACLCTAIKASVLGIN 120

Query: 121 LDVPVSFSLLVSSCKKSVPAG 139
           + VPV+ SLL+S+C KS+P G
Sbjct: 121 VKVPVAISLLISACGKSIPPG 124

[Close]

BLAST of CmoCh12G002950 vs. NCBI nr
Match: gi|357437019|ref|XP_003588785.1| (protease inhibitor/seed storage/LTP family protein [Medicago truncatula])

HSP 1 Score: 122.5 bits (306), Expect = 1.2e-24
Identity = 73/147 (49.66%), Postives = 99/147 (67.35%), Query Frame = 1


Query: 1   MASKSLSSPILLLSLLLCLSLSAA------SPCNQPKIKPSPAKKKPANPKIIRPPSSSP 60
           MAS  LS+ I+L SLL   + S A      +P  +PK KP P+   P++      PS++P
Sbjct: 1   MASNKLSALIILFSLLAYSTFSHACGSCKPTPSPKPKPKPKPSPPPPSSTPCPPTPSTTP 60

Query: 61  AVQTAY--CPKDTVKFSVCTNILG-IGSLIGSPVSSKCCDLLAGLTNLEAAACLCTAIKA 120
              +    CP DT+K  VC ++LG +  ++GSP SSKCC LL GL +L+AA CLCTAIKA
Sbjct: 61  PTPSTSQKCPSDTLKLGVCADVLGLVNVIVGSPASSKCCALLQGLVDLDAAICLCTAIKA 120

Query: 121 NVLGINLDVPVSFSLLVSSCKKSVPAG 139
           NVLGINL+VP++ SLL+S+C+KSVP+G
Sbjct: 121 NVLGINLNVPITLSLLLSACEKSVPSG 147

The following BLAST results are available for this feature:

BLAST of CmoCh12G002950 vs. Swiss-Prot


Match Name	E-value	Identity	Description
ERLL1_ARATH	3.5e-19	40.51	pEARLI1-like lipid transfer protein 1 OS=Arabidopsis thaliana GN=AZI1 PE=1 SV=1	[more]
14KD_DAUCA	7.8e-19	41.96	14 kDa proline-rich protein DC2.15 OS=Daucus carota PE=2 SV=1	[more]
ERLI1_ARATH	1.5e-17	39.63	Lipid transfer protein EARLI 1 OS=Arabidopsis thaliana GN=EARLI1 PE=1 SV=1	[more]
ERLL2_ARATH	1.8e-15	40.68	pEARLI1-like lipid transfer protein 2 OS=Arabidopsis thaliana GN=At4g12490 PE=2 ...	[more]
LBP65_ARATH	2.3e-15	40.58	Putative lipid-binding protein At4g00165 OS=Arabidopsis thaliana GN=At4g00165 PE...	[more]

BLAST of CmoCh12G002950 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LPN2_CUCSA	1.6e-42	72.73	Proline-rich protein DC2.15 OS=Cucumis sativus GN=Csa_2G381890 PE=4 SV=1	[more]
A0A061GJ47_THECC	6.0e-26	53.24	Bimodular protein OS=Theobroma cacao GN=TCM_036975 PE=4 SV=1	[more]
F6H3H9_VITVI	2.3e-25	55.32	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_04s0008g05640 PE=4 SV=...	[more]
G7I725_MEDTR	8.6e-25	49.66	Protease inhibitor/seed storage/LTP family protein OS=Medicago truncatula GN=MTR...	[more]
P93512_BRANA	7.3e-24	46.43	Proline-rich SAC51 protein OS=Brassica napus GN=proline-rich SAC51 PE=2 SV=1	[more]

BLAST of CmoCh12G002950 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G62510.1	4.5e-25	45.89	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumi...	[more]
AT2G45180.1	7.2e-23	47.14	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumi...	[more]
AT1G12090.1	2.3e-21	42.07	extensin-like protein	[more]
AT4G12470.1	2.0e-20	40.51	azelaic acid induced 1	[more]
AT4G12510.1	1.3e-19	43.75	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumi...	[more]

BLAST of CmoCh12G002950 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659088926\|ref\|XP_008445235.1\|	9.1e-44	74.13	PREDICTED: pEARLI1-like lipid transfer protein 1 [Cucumis melo]	[more]
gi\|449441902\|ref\|XP_004138721.1\|	2.2e-42	72.73	PREDICTED: pEARLI1-like lipid transfer protein 1 [Cucumis sativus]	[more]
gi\|590572334\|ref\|XP_007011824.1\|	8.6e-26	53.24	Bimodular protein [Theobroma cacao]	[more]
gi\|225430322\|ref\|XP_002285197.1\|	3.3e-25	55.32	PREDICTED: putative lipid-binding protein At4g00165 [Vitis vinifera]	[more]
gi\|357437019\|ref\|XP_003588785.1\|	1.2e-24	49.66	protease inhibitor/seed storage/LTP family protein [Medicago truncatula]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR016140	Bifunc_inhib/LTP/seed_store
IPR027923	Hydrophob_seed

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006508	proteolysis
biological_process	GO:0006144	purine nucleobase metabolic process
biological_process	GO:0006206	pyrimidine nucleobase metabolic process
biological_process	GO:0006351	transcription, DNA-templated
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0005730	nucleolus
molecular_function	GO:0008233	peptidase activity
molecular_function	GO:0003899	DNA-directed RNA polymerase activity
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh12G002950.1	CmoCh12G002950.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	SMART	SM00499	aai_6	coord: 61..140 score: 4.
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	unknown	SSF47699	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin	coord: 64..138 score: 1.55
IPR027923	Hydrophobic seed protein	PFAM	PF14547	Hydrophob_seed	coord: 61..139 score: 1.7
None	No IPR available	GENE3D	G3DSA:1.10.110.10		coord: 60..138 score: 4.5
None	No IPR available	PANTHER	PTHR31731	FAMILY NOT NAMED	coord: 1..138 score: 1.1

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh12G002950	Cucsa.162540	Cucumber (Gy14) v1	cgycmoB0448
CmoCh12G002950	CmaCh12G003450	Cucurbita maxima (Rimu)	cmacmoB176
CmoCh12G002950	Cla022335	Watermelon (97103) v1	cmowmB134
CmoCh12G002950	Csa2G381890	Cucumber (Chinese Long) v2	cmocuB149
CmoCh12G002950	MELO3C011271	Melon (DHL92) v3.5.1	cmomeB151
CmoCh12G002950	CSPI02G23640	Wild cucumber (PI 183967)	cmocpiB150
CmoCh12G002950	Lsi08G012150	Bottle gourd (USVL1VR-Ls)	cmolsiB175
CmoCh12G002950	MELO3C011271.2	Melon (DHL92) v3.6.1	cmomedB167
CmoCh12G002950	CsaV3_2G032190	Cucumber (Chinese Long) v3	cmocucB0176
CmoCh12G002950	Cla97C08G156820	Watermelon (97103) v2	cmowmbB178
CmoCh12G002950	Bhi04G000007	Wax gourd	cmowgoB0191
CmoCh12G002950	CsGy2G023420	Cucumber (Gy14) v2	cgybcmoB160

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh12G002950	Cucumber (Chinese Long) v3	cmocucB0201
CmoCh12G002950	Watermelon (97103) v2	cmowmbB177
CmoCh12G002950	Cucurbita moschata (Rifu)	cmocmoB006
CmoCh12G002950	Cucurbita moschata (Rifu)	cmocmoB139
CmoCh12G002950	Cucurbita moschata (Rifu)	cmocmoB142
CmoCh12G002950	Cucurbita moschata (Rifu)	cmocmoB156
CmoCh12G002950	Cucurbita maxima (Rimu)	cmacmoB035
CmoCh12G002950	Cucurbita maxima (Rimu)	cmacmoB455
CmoCh12G002950	Cucurbita maxima (Rimu)	cmacmoB770
CmoCh12G002950	Watermelon (Charleston Gray)	cmowcgB153
CmoCh12G002950	Watermelon (Charleston Gray)	cmowcgB161
CmoCh12G002950	Cucurbita pepo (Zucchini)	cmocpeB154
CmoCh12G002950	Cucurbita pepo (Zucchini)	cmocpeB167
CmoCh12G002950	Cucurbita pepo (Zucchini)	cmocpeB173
CmoCh12G002950	Cucurbita pepo (Zucchini)	cmocpeB174
CmoCh12G002950	Bottle gourd (USVL1VR-Ls)	cmolsiB164
CmoCh12G002950	Cucumber (Gy14) v2	cgybcmoB889
CmoCh12G002950	Silver-seed gourd	carcmoB0192
CmoCh12G002950	Silver-seed gourd	carcmoB0280
CmoCh12G002950	Silver-seed gourd	carcmoB0869
CmoCh12G002950	Silver-seed gourd	carcmoB0912
CmoCh12G002950	Silver-seed gourd	carcmoB1310