CmoCh12G001040 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh12G001040
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Mitochondrial transcription termination factor family protein, putative
Location	Cmo_Chr12 : 565766 .. 571719 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexonthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACCAATTTTCTGTTCAAAGTTCCTCTGCGTCTCTTTGCTCAAGATCTCCAGAAGTTTGCAGGGAACGACACCACAATTTCCCGCAAATTCCTCTCTTCTCTGTCTGAAATCTCTCAATCAACCAACAATCGGACGGTCGACTACCTTGTTCATACCCTTGGATTCTCCAAGGACTCAGCTCTCGCCGCTGCGAAGCGAATCCATCTCAAAACTACTGCAAATCCCGACTCTGTCATTGCTCTCTTCAAGGCCTATGGATTCACACTGTCTGATACTGCCAGCATCTTTTGCAGACATCCTAATCTCCTCCTTGCCGATCCGGACACAATACTCAAACCTAAGTTTGAGTTTCTCTCTCGAAATGGTTTCACTGGTCATGTTCTCGTCGACGTAATCTCTAGGGATCCGTCAATTCTTAGAAGGAGTTTGAAGAAGCAGATTGTTCCGTGTATTGATTTTCTCAGAAATTTTTTTGGCTCTACTGATGGTGTAGTCTCGCTCTTTTCTGCTAGACGTGGGACTTGGGTTTTGCGAAAGTTTACAGAATCTGTGGCTCCCAATATCGAACTATTGAGAGCTAATGGCGTGCCTGATTCGAACATCGCGAAGATTTTTTGGATGCGCCCGAGGACACTAGCAAGGAATGCGGAAGAGTTCAGTGACATCGTCGAGAAGACGAAGGAAGCTGGTTTTAATCCTTCGAGCCCGATGTTTACTTATGGGCTGTGTACGTTTTTAGGGATGAAAAAGGACAAATGGTTATCGAAACTGCATATTTTTACAAGTTTTGGGTGGTCAGAGGAGCAGTTTCAATCTCTATTTCTCAAGCAGCCCACGATTATGAATTCGTCTGAAGAGCAAATAAAGAAGGCCTTGGATTTCTTGATGAACAAATTGGACTGGACGCACGAAGAAATTTCCAAGTACCCAAATGTACTTTATCTTAGTTTTGAAAAAAGGGTGGTTCCGAGGTCGTCTATTCTTCAGCACCTGATGTCAAAAGGTTTTATCAAGAAGACAAATTTTGGCAGAGCATTTATGCTTAGCGAGGATAAGTTTTTGGTCAAGTTTGTGATGCAGTATCTTTCTGAGGATCCACATCTACTTGAGATGTACCAGAAGAAGATGGCAGTTTTATAAACTCTTGGAGTGCAATTCAGGTAATTCGTCTCTTCTGTAAAAACTGTGCACTTCACTTGTGAGAAGATTGTAGGTTTGTGTGTAAAACTTATGAAATTTCACAGACCTTAGAACTGTTATTCACTGACAGAAGACCCATGAAGGTTATAACATGTAGATCTTTTAGGAATGTTCCCACTTGCACGAGACTGCCTGCTAAGAATCAAGCAACTATTATGATGCTTAACTTTAAAAATTGATATACTTAAAATTATCCCCATAACATAGATGTCCCTATAAGAATTAACTACAATTTAGTTCATACTGTAATTGATTGACTTTTGGTGGGTCATTGGAGCTTCCGGTAGATTACCCTGGCCTATTCTATTTGCATGTTTACAGTACGAGATCCAATAACCTAACGAAAATCATTTAACTATAAAAAAAAAAAAAAAAAAAAAAAAGTGAAATCCCACATCAATTGGAAGAGGAACAAGTGCCAGCTAGGACGCTGGCTCCGAAGGGGATTGGATTGTGAGATCTAACATCGGTTGGAGATGGAAATGAAACATTCTTTATAAAGGTGTGGAAAACTCTCCCTAGCACACACGTTTTAAAAACCTTGAGGGGAAGCTCGAAAGGGAAAACCCAAAGATGATAATATCTGCTAGCGGTGGGCTTGGGTTGTTACAAAAAACCTCGAGGAAAATTGTAACATCTCGATGCTTTAGTTTAGGAGATGTGCTATCCCCCTGCTCTTTTTGTGGTTGCTGCTCTGATTGATCCAGTAGGCTGCTCATTTATGGTCAACATGCTTGTGATATTTGGAAAAATTCTATATTTGGAAGTGCACATTAAAGGTGAACCATATCTTTAGTATGAAACTATCTGGTTTGTAGAGGTGAAGACTTTGCAGAAGATAGTTTAGATCTTTGAGGCTTAAAAGTTAAAACCAAACTTTCTAAATGGTAAATGTCGGGAGTAAATTGGTGTAGAAGGACTTTTGAGACACAGACTCAAGTCTGGATTTTGTAATGGATCTTTTCCAATCAAATACCTTGGCCATTGAGATGGAACCCCATAGGTTAATCAAAATAAAGTGGAGTATGAAAGGATGGAGATAGAGAGGAAGTGGGATTTGAGCTATGAGAGGATTCTTGAAGGAAAATACTTTCCATATACAACATTTAAAGGTGTCTAGGTACTACACATCTCCCTATCAGCCACAAGTTCTTCCAAGAGTTAGAAGTGAAGGCCTTGTCCTCTAAATAAAATTCTTGAGGAAAAAAGAAGTGGTTTCCTAACCAAAATGGTTAAACTGAATTCAAATAGAAGAATGAATAAGGTCCTGTTCTTTCCTTGATATCTAATTCCTTCCAAATAAGGGCAAGCCAGAAGATGGGGAATCCGCATTTGATTCGGAATAGTAGTCTGTTGGTTAACTTTAATCCAAGATTGAGTTATATTTGTGAAAAGCTTTCTGATGATGACTTCATTGGAAGACAGGACACTTCGTACGTGTAGTCCACTAGACCTTTTGGGTGGGGTTTTCCTCTTCCTCCCTCACTAGGCTGTCTTTTTTTTTCGTTCTTTTTGTTAATAATACAGTGTGAAAAGCAAAATGGAGATCGTAACTTCCTCTTTAATTCTGTCCTCTGTTGTGGAACCGTTGGTCTACACGCTAAAGGATTGAGTTGGTGTCAACTTAGTTTGGCCTTCTTAATCTGCGAACAACCTCCTCCAGTTACTCCCTCTTAAGAGGAGGATAAAGTTCTTTGGAAGATCATTGTAACCGTCCAAGCCCACCGCTAACAGTTCTCTCAAAGTTTTTAAAACGCGTCTACTAGGAAGAGGTTTCCACACCCTTATAAAGAAGGATTCGTTCCTCTCTCCAACCGATGTGGGATCTCACAATCCACTCCCCCTTCGGGGTTCACTGTCCTCGTTGACACTCATTCCTCCAATTGATGTGGGATCTCTCAATCATGGTGAAGACTGATACTATGAGTTAGGGATTATAGGTTTGGAAGGAGTAGGATAACTTTTGTGGGGGTGGTAGGATAGTTTAAAATCATAGGTTTGGAAGGAGTAGGATAACTTTTGTGGGGGTGGTAGGATAGTTTAAAATCAAAGAAATCTCTTGTAACGATAAGGGTTTCAAAATGGAAAAAAAAAAAAAAAAAAAAAAAAACCGCCTTAAATCTCGCTGGAAATAGTATTTCCGGTGAGGCATGTCTTGCCAGCAAGGGCGTATTAATGCCTTAAGTCCCCATATTAAACCCTAGGTACCTTAGTAGCCGTCTTTTCTTTTTGAGTCACTGTTGTACCTGTGAGGGAGGAGCTGAAAGGTTTAGGTGAGGAATCGAAAACGTCGCGAGACTTCGGACTTCTGTGAGTCCTTAGATAGGAGCAAACCAACGCTGAGGTACGTTAGGGCAAGGAAGGACAGACGCACCATCAGGGACGAACGGACGATGACGATTCCACTGGCGACACGGGCGCGGGTCGGTTCGTCGGGTATTTTGCGAGTCGTCTCAGCCGACACCACCACTGGGCCGCGTCCCATTTCGGCCCGAAACCAGTGATGCCTAGACGCATCCAGAAACCCTGCGCCGTTAGTGGTCTTTGCAGCCCATCGGCTTCAGCTTCGTCGGCAGCTCTGTTGCACTCCAGGCTCGGCTCGACTCGGCAGTGTGGCTTAGCGGCTCGACGTACGAATAATATACCAATTCCTAGGTTTCCGACCCTTCTGGAGCCATTCCTACCCTTGTTTCAACCATCTGAGGTCAATAGAACTCCATTTTTTATAAAACAAGTTGTGATAGGGACGTACCTTGGTAGCTAGGCATAAGGGCTAGTTGTGAAATGGCTCTAAGCGTGTCATATGATCTTATAGGGGTAGTTAGGCGTCGGAGTTAGCGGTGCGAGTGACTTCTGCTAAGGTCAAGGAGATAAGTAACCTTACTGTTGGTTTTAGTTATGTATGTATGTTGGTGTGTGCCCTGTGGCCCTTGCATGCACGATGTGTGTTGTTGATGTATGCTAGGTTATATGTTTCTTGCAGTGAAATGCTACGTATGCCATGTATGTGATGTTTATGTCATGACTTGCTACCTTGTATGCATGAGCTTGATTGACGTGTCACGATTGTAATGAGAACTCCGCATGCCATGAATGTGATGACTAGTGTGCTACGATACGCTTACTGTTGTTTAATCCAGTTATGCTATGTAATGCGGCTATGATATGCTTATCCGTTGTTTAACCCAGTTATGCTATGTAATGCGGTGAGGGGATGGAACGTTGTATGTATAATGCCATGGAGGTAAACCTTAGGGACCTCATGCACGCTATGTGCTACGTGCATGGGGTTACTTCCCCGTTATGCTAATGATGGTACGGACGCGTACGTTCGATATTATGTTCGCTATGATATCATGCAGACCCTCCTTTTTCGTGGTGTCCGATATTGTATGTCATACGTACCCGACAAGCCAGGCTCAGGGAGTTTGCATGCGAACTTGCCTGGTGGGTCCACAGTCATGCATGTGGGCCATGTGTGGGAAAGTACCATGTATCCACCCCGCCCGGACAAAGCAAGGGCCTAAGGCCATGGGAAGGAATGGAAGATAGGCCCCCTCTCGTTTTCTTTCTTTAGCACTTGTGCTTATGTATGTGTATTGTATGCGATCGCATGTATCCTAATGTATGTTATATGCTTAATCCCAATAGTGGGGCGACTTACTGGGTATTTCATATAATACTCAAGCTACGTGCTACCTACATTTTCAGGTAAGGGCAAGGCCCCCATGTACGGCTGACGGTGAACGCTGCGAAGGCCATGGAAGTTTTAGGAAGGGCTTGTAGTGTCGTAGGCGTCTTGTTTGGACTCCTTGTTTGGACTCCCTCCGATGATAGTTATTGCAATTATTTCTTCTAGTTATCTATTGATTATTTCTTAGTTAGGCTGTTGTTATTGTTTTTCCCCAGGTATGAACGTATTGTCGTTATTGAGACTGTCTTACATAAACTTTCGTACTTTCGTTATACAAGTACAAGGTAACGACGCTAATTAGGTTAGAGAAAATTAGGGCGTTACATCTCTATTCTTCACACCCCACCATTTTTCTTCAAGATTCTCTTGATGCGACCCAAAACTTCATATTAGCATTTTTCTTCTTCCTCAGTGGTATAAGATGTTATTCATCCAAGAACATGAACTTCCTGTTAGCAACGATATTGTAAATGGGAACATTCTTGGTGATTACATTCAAGTTGCTTCCAAGTTTAGAGCTCATACAGGGGTTGAATATTTCCATACTGCCATGAATGAACGTTGTAAATGTGTAAATGCATTCTCAATCCTTTTCTGTTACTTCTGCTGCAGTTTGATTATCGTTTTGAATCCAACACACCATATATTAGTTTGTTTCGACTTCGTGCATATCGTACTCACATTTGCGTTCTCGGTCATGAATATATTCTTTTTTTCAGGAAGAAAACAGACAAAATTTTGGAAAGTCCAGGTTTCATGGACATCAATTTCTGGCAGGATGGTCTTTGAAGAGAGATTTGAGATTCTGAGCGGTTTTTTGTGGGTATTTTACCGAATTTTGGGATGCAGAAATGAATGTATTGTTCTGGACCTGCTGATGGTTAATTAGCTCAAATTATTCATTATATTTTAGGAATTATAATCTTTGGGGTTGCTCGAAATCTGTCAAAGACTTACTCTTACCCCAGAGTGGATGACTCGAATAGCTCGTAGCATGAGGTCGTATCTCTGGAAACACCGATGCCGGTCACATGCTTCAAAGTACAAAAGGGCGGAG

mRNA sequence

ATGACCAATTTTCTGTTCAAAGTTCCTCTGCGTCTCTTTGCTCAAGATCTCCAGAAGTTTGCAGGGAACGACACCACAATTTCCCGCAAATTCCTCTCTTCTCTGTCTGAAATCTCTCAATCAACCAACAATCGGACGGTCGACTACCTTGTTCATACCCTTGGATTCTCCAAGGACTCAGCTCTCGCCGCTGCGAAGCGAATCCATCTCAAAACTACTGCAAATCCCGACTCTGTCATTGCTCTCTTCAAGGCCTATGGATTCACACTGTCTGATACTGCCAGCATCTTTTGCAGACATCCTAATCTCCTCCTTGCCGATCCGGACACAATACTCAAACCTAAGTTTGAGTTTCTCTCTCGAAATGGTTTCACTGGTCATGTTCTCGTCGACGTAATCTCTAGGGATCCGTCAATTCTTAGAAGGAGTTTGAAGAAGCAGATTGTTCCGTGTATTGATTTTCTCAGAAATTTTTTTGGCTCTACTGATGGTGTAGTCTCGCTCTTTTCTGCTAGACGTGGGACTTGGGTTTTGCGAAAGTTTACAGAATCTGTGGCTCCCAATATCGAACTATTGAGAGCTAATGGCGTGCCTGATTCGAACATCGCGAAGATTTTTTGGATGCGCCCGAGGACACTAGCAAGGAATGCGGAAGAGTTCAGTGACATCGTCGAGAAGACGAAGGAAGCTGAGGAGCAGTTTCAATCTCTATTTCTCAAGCAGCCCACGATTATGAATTCGTCTGAAGAGCAAATAAAGAAGGCCTTGGATTTCTTGATGAACAAATTGGACTGGACGCACGAAGAAATTTCCAAGTACCCAAATGGTGGTTCCGAGGTCGTCTATTCTTCAGCACCTGATGTCAAAAGGAAGAAAACAGACAAAATTTTGGAAAGTCCAGGTTTCATGGACATCAATTTCTGGCAGGATGGTCTTTGAAGAGAGATTTGAGATTCTGAGCGGTTTTTTGTGGGTATTTTACCGAATTTTGGGATGCAGAAATGAATGTATTGTTCTGGACCTGCTGATGGTTAATTAGCTCAAATTATTCATTATATTTTAGGAATTATAATCTTTGGGGTTGCTCGAAATCTGTCAAAGACTTACTCTTACCCCAGAGTGGATGACTCGAATAGCTCGTAGCATGAGGTCGTATCTCTGGAAACACCGATGCCGGTCACATGCTTCAAAGTACAAAAGGGCGGAG

Coding sequence (CDS)

ATGACCAATTTTCTGTTCAAAGTTCCTCTGCGTCTCTTTGCTCAAGATCTCCAGAAGTTTGCAGGGAACGACACCACAATTTCCCGCAAATTCCTCTCTTCTCTGTCTGAAATCTCTCAATCAACCAACAATCGGACGGTCGACTACCTTGTTCATACCCTTGGATTCTCCAAGGACTCAGCTCTCGCCGCTGCGAAGCGAATCCATCTCAAAACTACTGCAAATCCCGACTCTGTCATTGCTCTCTTCAAGGCCTATGGATTCACACTGTCTGATACTGCCAGCATCTTTTGCAGACATCCTAATCTCCTCCTTGCCGATCCGGACACAATACTCAAACCTAAGTTTGAGTTTCTCTCTCGAAATGGTTTCACTGGTCATGTTCTCGTCGACGTAATCTCTAGGGATCCGTCAATTCTTAGAAGGAGTTTGAAGAAGCAGATTGTTCCGTGTATTGATTTTCTCAGAAATTTTTTTGGCTCTACTGATGGTGTAGTCTCGCTCTTTTCTGCTAGACGTGGGACTTGGGTTTTGCGAAAGTTTACAGAATCTGTGGCTCCCAATATCGAACTATTGAGAGCTAATGGCGTGCCTGATTCGAACATCGCGAAGATTTTTTGGATGCGCCCGAGGACACTAGCAAGGAATGCGGAAGAGTTCAGTGACATCGTCGAGAAGACGAAGGAAGCTGAGGAGCAGTTTCAATCTCTATTTCTCAAGCAGCCCACGATTATGAATTCGTCTGAAGAGCAAATAAAGAAGGCCTTGGATTTCTTGATGAACAAATTGGACTGGACGCACGAAGAAATTTCCAAGTACCCAAATGGTGGTTCCGAGGTCGTCTATTCTTCAGCACCTGATGTCAAAAGGAAGAAAACAGACAAAATTTTGGAAAGTCCAGGTTTCATGGACATCAATTTCTGGCAGGATGGTCTTTGA

Homology

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BLAST of CmoCh12G001040 vs. TrEMBL
Match: A0A0A0LK19_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G346010 PE=4 SV=1)

HSP 1 Score: 309.3 bits (791), Expect = 5.3e-81
Identity = 175/292 (59.93%), Postives = 205/292 (70.21%), Query Frame = 1


Query: 1   MTNFLFKVPL-RLFAQDLQKFAGNDTTISRKFLSSLSEISQSTNNRTVDYLVHTLGFSKD 60
           MTNFL K  L RLFAQDL+ F  N+TTI  KFLSSLS+  QSTN+ TVDYL+HT+G SK 
Sbjct: 1   MTNFLLKPSLLRLFAQDLRDFTHNNTTIGLKFLSSLSQTPQSTNDPTVDYLIHTIGLSKA 60

Query: 61  SALAAAKRIHLKTTANPDSVIALFKAYGFTLSDTASIFCRHPNLLLADPDTILKPKFEFL 120
           SALAAAK+I LK TA+PDSV+ALF AYGFT S  ASIF R P+LLLA+PDT LKPKFEFL
Sbjct: 61  SALAAAKQIRLKPTAHPDSVLALFNAYGFTPSHIASIFSRRPSLLLANPDTTLKPKFEFL 120

Query: 121 SRNGFTGHVLVDVISRDPSILRRSLKKQIVPCIDFLRNFFGSTDGVVSLFSARRGTWVLR 180
           SRNG +G+ L DVI RDP IL RSL KQIVPCIDFL NFFGSTD +VSLFS    T VL 
Sbjct: 121 SRNGISGNFLADVIDRDPLILCRSLDKQIVPCIDFLINFFGSTDCIVSLFSTAHRTRVLH 180

Query: 181 KFTESVAPNIELLRANGVPDSNIAKIFWMRPRTLARNAEEFSDIVEKTKEAEEQFQSL-F 240
            F+E VAPNIE+LRANGV DSNIAK+ WMRP  L+R+ E F+DIVEKT+E      SL F
Sbjct: 181 TFSEFVAPNIEVLRANGVLDSNIAKLLWMRPIALSRDVEWFTDIVEKTRERGFNPSSLMF 240

Query: 241 LKQPTIMNSSEEQIKKALDFLMNKLDWTHEEISKYPNGGSEVVYSSAPDVKR 291
           +     ++S  +    +   L     W+ E+          V+ SS   +KR
Sbjct: 241 IHGLCTLSSMSKDKWLSKLHLFRSFGWSDEQFQSMFLKKPFVMNSSEEHLKR 292

[Close]

BLAST of CmoCh12G001040 vs. TrEMBL
Match: A0A0A0LQN0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G402010 PE=4 SV=1)

HSP 1 Score: 308.9 bits (790), Expect = 7.0e-81
Identity = 164/271 (60.52%), Postives = 201/271 (74.17%), Query Frame = 1


Query: 1   MTNFLFKVPL-RLFAQDLQKFAGNDTTISRKFLSSLSEISQSTNNRTVDYLVHTLGFSKD 60
           M NFL K  L RL+AQDL+ FA N TTI   FLSSLS+  QSTN+RT+DYL+HT+G SKD
Sbjct: 1   MANFLRKPSLLRLYAQDLRNFAHNKTTIGLNFLSSLSQSPQSTNHRTLDYLIHTIGLSKD 60

Query: 61  SALAAAKRIHLKTTANPDSVIALFKAYGFTLSDTASIFCRHPNLLLADPDTILKPKFEFL 120
           SALAAAK+IHLK +++PDSV+ALF AYGFT S TA+IFCR P LLLADPD  LKPKFEFL
Sbjct: 61  SALAAAKKIHLKPSSDPDSVLALFNAYGFTPSQTANIFCRQPRLLLADPDKTLKPKFEFL 120

Query: 121 SRNGFTGHVLVDVISRDPSILRRSLKKQIVPCIDFLRNFFGSTDGVVSLFSARRGTWVLR 180
           S+NG +G+ LVD+I R+P ILRRSL K+IVPC DFL NFFGSTD +VSLF     T VL 
Sbjct: 121 SKNGISGNFLVDLICREPHILRRSLDKKIVPCFDFLINFFGSTDCIVSLFCTTHRTRVLH 180

Query: 181 KFTESVAPNIELLRANGVPDSNIAKIFWMRPRTLARNAEEFSDIVEKTKEAEEQFQSL-F 240
            F+E +APNIE+LRANGVPDS+IAK+FW RP  L+R+ + F+DIVEKTKE      SL F
Sbjct: 181 TFSEFMAPNIEVLRANGVPDSSIAKLFWKRPVALSRDVKWFTDIVEKTKERGFNPSSLMF 240

Query: 241 LKQPTIMNSSEEQIKKALDFLMNKLDWTHEE 270
           +    I++S  +    +   +     W+ E+
Sbjct: 241 INGLCIVSSMSKDRWLSKLHIFRSYGWSDEQ 271

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BLAST of CmoCh12G001040 vs. TrEMBL
Match: A0A059AAC3_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_J00315 PE=4 SV=1)

HSP 1 Score: 173.3 bits (438), Expect = 4.6e-40
Identity = 98/238 (41.18%), Postives = 134/238 (56.30%), Query Frame = 1


Query: 34  SLSEISQSTNNRTVDYLVHTLGFSKDSALAAAKRIHLKTTANPDSVIALFKAYGFTLSDT 93
           S +  + S+ +   D LV   GF  +SA A A  +  K     DS +ALF+  GF  SD 
Sbjct: 33  STTAAAASSPSSIADALVRAHGFPPESARAVAGAVAPKLARYLDSFVALFRGRGFAPSDI 92

Query: 94  ASIFCRHPNLLLADPDTILKPKFEFLSRNGFTGHVLVDVISRDPSILRRSLKKQIVPCID 153
           ASI  R P+ L++    +L+PK EF   NG  G  LV V+  DP +L RSLK Q+ PC D
Sbjct: 93  ASILTRCPDTLVSKASNLLEPKLEFFEENGVAGEALVHVLVNDPYVLGRSLKSQLAPCFD 152

Query: 154 FLRNFFGSTDGVVSLFSARRGTWVLRKFTESVAPNIELLRANGVPDSNIAKIFWMRPRTL 213
            L  FFGS + V +    +RGTWVLR F+ES+  NI  LR +GVPDS+IAK+  +RPRTL
Sbjct: 153 CLVRFFGSREDVAAHLVVKRGTWVLRAFSESMEANIATLRRHGVPDSSIAKMMTLRPRTL 212

Query: 214 ARNAEEFSDIVEKTKEAEEQFQSLFLKQPTIMNSSEEQIKKALDF-LMNKLDWTHEEI 271
           +R+  +FSDIV++ K       SL      I  +  ++ K A    +  K  WT E++
Sbjct: 213 SRDKGQFSDIVDEIKGMGFDPSSLLFVHGVISMAGMKRPKWAAKMAVFKKFGWTDEQV 270

[Close]

BLAST of CmoCh12G001040 vs. TrEMBL
Match: A0A059A9T0_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_J00314 PE=4 SV=1)

HSP 1 Score: 170.2 bits (430), Expect = 3.9e-39
Identity = 91/223 (40.81%), Postives = 132/223 (59.19%), Query Frame = 1


Query: 48  DYLVHTLGFSKDSALAAAKRIHLKTTANPDSVIALFKAYGFTLSDTASIFCRHPNLLLAD 107
           D L    GF  +SA A A  +  K     DS +A+F  +GF+ S+ A++  R+P  L ++
Sbjct: 62  DRLARAHGFPPESARAVAAAVDPKLAHKLDSFVAVFTGHGFSPSEVATVLLRYPRCLRSN 121

Query: 108 PDTILKPKFEFLSRNGFTGHVLVDVISRDPSILRRSLKKQIVPCIDFLRNFFGSTDGVVS 167
           P   LKPK +FL+ NG  G  LV V++ DP +LRRSL+ Q+ PC D L  FFG+    +S
Sbjct: 122 PVKNLKPKLDFLAGNGVAGETLVHVLTNDPYLLRRSLESQLAPCFDCLVKFFGNRRDAIS 181

Query: 168 LFSARRGTWVLRKFTESVAPNIELLRANGVPDSNIAKIFWMRPRTLARNAEEFSDIVEKT 227
           L   +RGTWVL KFT+S+  NI+ LR  GVPDS+I K+  +RPRTL+R+A EFS+IV++ 
Sbjct: 182 LLMVKRGTWVLHKFTDSMELNIDKLRQVGVPDSSITKLMTVRPRTLSRDATEFSEIVDEV 241

Query: 228 KEAEEQFQSLFLKQPTIMNSSEEQIK-KALDFLMNKLDWTHEE 270
           +       SL      I  +  ++ K +A   +  K  W+ E+
Sbjct: 242 RRMGLHPSSLMFVYGVITLAGMKRPKWEAKIAVFKKFGWSDEQ 284

[Close]

BLAST of CmoCh12G001040 vs. TrEMBL
Match: A0A059AB47_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_J00314 PE=4 SV=1)

HSP 1 Score: 170.2 bits (430), Expect = 3.9e-39
Identity = 91/223 (40.81%), Postives = 132/223 (59.19%), Query Frame = 1


Query: 48  DYLVHTLGFSKDSALAAAKRIHLKTTANPDSVIALFKAYGFTLSDTASIFCRHPNLLLAD 107
           D L    GF  +SA A A  +  K     DS +A+F  +GF+ S+ A++  R+P  L ++
Sbjct: 62  DRLARAHGFPPESARAVAAAVDPKLAHKLDSFVAVFTGHGFSPSEVATVLLRYPRCLRSN 121

Query: 108 PDTILKPKFEFLSRNGFTGHVLVDVISRDPSILRRSLKKQIVPCIDFLRNFFGSTDGVVS 167
           P   LKPK +FL+ NG  G  LV V++ DP +LRRSL+ Q+ PC D L  FFG+    +S
Sbjct: 122 PVKNLKPKLDFLAGNGVAGETLVHVLTNDPYLLRRSLESQLAPCFDCLVKFFGNRRDAIS 181

Query: 168 LFSARRGTWVLRKFTESVAPNIELLRANGVPDSNIAKIFWMRPRTLARNAEEFSDIVEKT 227
           L   +RGTWVL KFT+S+  NI+ LR  GVPDS+I K+  +RPRTL+R+A EFS+IV++ 
Sbjct: 182 LLMVKRGTWVLHKFTDSMELNIDKLRQVGVPDSSITKLMTVRPRTLSRDATEFSEIVDEV 241

Query: 228 KEAEEQFQSLFLKQPTIMNSSEEQIK-KALDFLMNKLDWTHEE 270
           +       SL      I  +  ++ K +A   +  K  W+ E+
Sbjct: 242 RRMGLHPSSLMFVYGVITLAGMKRPKWEAKIAVFKKFGWSDEQ 284

[Close]

BLAST of CmoCh12G001040 vs. TAIR10
Match: AT5G07900.1 (AT5G07900.1 Mitochondrial transcription termination factor family protein)

HSP 1 Score: 117.9 bits (294), Expect = 1.2e-26
Identity = 68/222 (30.63%), Postives = 124/222 (55.86%), Query Frame = 1


Query: 9   PLRLFAQDLQKFAGNDTTISRKFLSSLSEISQSTNNRTVDYLVHTLGFSKDSALAAAKRI 68
           P+ +F+   Q F+   TT++ K  +   +  Q   + T++YL+ + G S DSA  A++++
Sbjct: 37  PIFVFSLQTQ-FSSPVTTLTSK--NPKDDEQQQKLSFTLNYLIDSCGLSPDSATVASRKL 96

Query: 69  HLKTTANPDSVIALFKAYGFTLSDTASIFCRHPNLLLADPDTILKPKFEFLSRNGFTGHV 128
            L +   P++V+ L + +GFT +  +S+  + P LLLA+ +++L PK  F    G +  +
Sbjct: 97  LLDSPERPNTVLNLLRDHGFTTAQISSLVKKRPVLLLANAESVLLPKLSFFLSIGVSKSL 156

Query: 129 LVDVISRDPSILRRSLKKQIVPCIDFLRNFFGSTDGVVSLFSARRGTWV-LRKFTESVAP 188
           L   ++ DP+IL RSL  Q++P  +FL++   S + +V+  + RR TWV L   T+++ P
Sbjct: 157 LARTLASDPTILTRSLVNQLIPSYNFLKSVLDSDEKIVA--ALRRTTWVFLEDHTKNLVP 216

Query: 189 NIELLRANGVPDSNIAKIFWMRPRTLARNAEEFSDIVEKTKE 230
           NI  +   GVP+  I  +    P  + +   EF  I ++ +E
Sbjct: 217 NINYMAETGVPEKCIKLLLTHFPEAVMQKNHEFQAIAKQAQE 253

[Close]

BLAST of CmoCh12G001040 vs. TAIR10
Match: AT1G21150.1 (AT1G21150.1 Mitochondrial transcription termination factor family protein)

HSP 1 Score: 102.8 bits (255), Expect = 3.8e-22
Identity = 66/236 (27.97%), Postives = 112/236 (47.46%), Query Frame = 1


Query: 46  TVDYLVHTLGFSKDSALAAAKRIHLKTTANPDSVIALFKAYGFTLSDTASIFCRHPNLLL 105
           TV YLV + G S +SA + ++ + L ++  PDSV+ALFK +GFT     S+    P +L 
Sbjct: 58  TVSYLVDSCGLSLESAKSNSRFVKLVSSKKPDSVLALFKDHGFTNDQITSVIKSFPRVLS 117

Query: 106 ADPDTILKPKFEFLSRNGFTGHVLVDVISRDPSILRRSLKKQIVPCIDFLRNFFGSTDGV 165
             P+ ++ PK  F S  GF+      +IS  P +L  SL K+++PC D L++     + V
Sbjct: 118 LSPEDVISPKLMFFSSIGFSTSDTAKMISSSPKMLSYSLHKRLIPCYDSLKSILVEEESV 177

Query: 166 VSLFSARRGTWVLR-KFTESVAPNIELLRANGVPDSNIAKIFWMRPRTLARNAEEFSDIV 225
           V     +RG      K T  V+  + + R  GVPD +I  +    P T       F++++
Sbjct: 178 VKCL--KRGIRCFSLKITHCVSLRVSICRELGVPDKSIKWLVQASPFTFFSRERRFNEVL 237

Query: 226 EKT-KEAEEQFQSLFLKQPTIMNSSEEQIKKALDFLMNKLDWTHEE----ISKYPN 276
            +      +  ++ F+      + + E   +    L     W+ E+    I ++PN
Sbjct: 238 NRVCSYGFDPKKAGFVHAMVAFDCTSESAMERKFKLFQCFGWSKEDFVAAIMRFPN 291

[Close]

BLAST of CmoCh12G001040 vs. TAIR10
Match: AT5G64950.1 (AT5G64950.1 Mitochondrial transcription termination factor family protein)

HSP 1 Score: 83.6 bits (205), Expect = 2.4e-16
Identity = 63/228 (27.63%), Postives = 106/228 (46.49%), Query Frame = 1


Query: 24  DTTISRKFLSSLSEISQSTNNRTVDYLVHTLGFSKDSALAAAKRI-HLKTTANPDSVIAL 83
           D  +S    SS +  +  +N   V++L    GF K  A+A A R  +LK+   P SVI +
Sbjct: 19  DRALSLHHFSSNATPASISNPAFVEFLRDN-GFQKPLAIAIAMRYPNLKSLEQPRSVIQM 78

Query: 84  FKAYGFTLSDTASIFCRHPNLLLADPDTILKPKFEFLSRNGFTGHVLVDVISRDPSILRR 143
            K+Y F+ +        HP ++  + + IL+PK  F    GFTG  L   +S++ S++  
Sbjct: 79  LKSYSFSDTQIQKSIRVHPRMMFYNVEKILEPKLRFFKDIGFTGSGLGKFVSQNSSVVGV 138

Query: 144 SLKKQIVPCIDFLRNFFGSTDGVVSLFSARRGTWVL--RKFTESVAPNIELLRANGVPDS 203
           SL K+++P ++ L++        + +  +R G W+L  R     + PNI  L   G+  S
Sbjct: 139 SLVKKLIPTVEILKSIVAPKHEDLPVILSRCG-WLLLSRDPNLFLLPNISYLETCGIVGS 198

Query: 204 NIAKIFWMRPRTLARNAEEFSDIVEKTKEAEEQFQSLFLKQPTIMNSS 249
            +A +   +PR    + E+    V +  +      S  L    I  SS
Sbjct: 199 QLASLLRRQPRIFNLSEEKLRGYVSRALDLGFTLNSRMLVHAVISLSS 244

[Close]

BLAST of CmoCh12G001040 vs. TAIR10
Match: AT1G61970.1 (AT1G61970.1 Mitochondrial transcription termination factor family protein)

HSP 1 Score: 83.6 bits (205), Expect = 2.4e-16
Identity = 59/220 (26.82%), Postives = 105/220 (47.73%), Query Frame = 1


Query: 13  FAQDLQKFAGNDTTISRKFLSSLS-EISQSTNNRTVDYLVHTLGFSKDSALAAAKRIHLK 72
           F+  +QK +      S    + LS  + +  NN TV YLV +LG +   A + ++++  +
Sbjct: 20  FSLSVQKASPTSNFFSSASAACLSPRVGRKGNNFTVSYLVDSLGLTTKLAESISRKVSFE 79

Query: 73  TTANPDSVIALFKAYGFTLSDTASIFCRHPNLLLADPDTILKPKFEFLSRNGFTGHVLVD 132
              NPDSV+ L  ++GFT S  ++I   +P LL+AD +  L PK +FL   G +   + +
Sbjct: 80  DKNNPDSVLNLLTSHGFTGSQISTIIRDYPQLLIADAEKSLGPKLQFLQSRGASSSEITE 139

Query: 133 VISRDPSILRRSLKKQIVPCIDFLRNFF--GSTDGVVSLFSARRGTWVLRKFTESVAPNI 192
           ++S  P IL +   K I    DF+++     S+       S  +G        E+   N+
Sbjct: 140 IVSSVPEILGKKGHKTISVYYDFIKDTLLEKSSKNEKLCHSLPQGN------LENKIRNV 199

Query: 193 ELLRANGVPDSNIAKIFWMRPRTLARNAEEFSDIVEKTKE 230
            +LR  G+P   +  +     + +    E+F + ++K  E
Sbjct: 200 SVLRELGMPHKLLFSLLISDSQPVC-GKEKFEETLKKVVE 232

[Close]

BLAST of CmoCh12G001040 vs. TAIR10
Match: AT3G46950.1 (AT3G46950.1 Mitochondrial transcription termination factor family protein)

HSP 1 Score: 83.2 bits (204), Expect = 3.1e-16
Identity = 60/222 (27.03%), Postives = 107/222 (48.20%), Query Frame = 1


Query: 16  DLQKFAGNDTTIS----------RKFLSSLSEISQSTNNR-TVDYLVHTLGFSKDSALAA 75
           +LQK+     T+S          + F S++++ S    +  TV YLV +LG +K  A   
Sbjct: 13  ELQKWRNLRVTVSIVQNAFPFTTKSFSSTIAKDSSPKGSTFTVSYLVESLGLTKKLAETI 72

Query: 76  AKRIHLKTTANPDSVIALFKAYGFTLSDTASIFCRHPNLLLADPDTILKPKFEFLSRNGF 135
           +K++  +   NPDSV+ L ++ GF  S  + I   +P LL+ D +  L+PK +FL   G 
Sbjct: 73  SKKVTFEDKVNPDSVLNLLRSNGFKDSQISRIIRAYPRLLVTDAEKSLRPKLQFLKSRGA 132

Query: 136 TGHVLVDVISRDPSILRRSLKKQIVPCIDFLRNFFGSTDGVVSLFSARRGTWVLRKFTES 195
           +   +++++S  P+IL +  ++ +    DF+++     DG     S   G    R     
Sbjct: 133 SSSEVIEIVSNVPTILDKKGEESVSLYYDFVKDIM--QDGKSLCISCPEGKKGNR----- 192

Query: 196 VAPNIELLRANGVPDSNIAKIFWMRPRTLARNAEEFSDIVEK 227
              NI +LR  GVP   +  +   R + +    E+F + ++K
Sbjct: 193 -IRNISVLRELGVPQKLLFSLLISRYQPVC-GKEKFEESLKK 225

[Close]

BLAST of CmoCh12G001040 vs. NCBI nr
Match: gi|778670382|ref|XP_004143080.2| (PREDICTED: uncharacterized protein LOC101214641 [Cucumis sativus])

HSP 1 Score: 309.3 bits (791), Expect = 7.6e-81
Identity = 175/292 (59.93%), Postives = 205/292 (70.21%), Query Frame = 1


Query: 1   MTNFLFKVPL-RLFAQDLQKFAGNDTTISRKFLSSLSEISQSTNNRTVDYLVHTLGFSKD 60
           MTNFL K  L RLFAQDL+ F  N+TTI  KFLSSLS+  QSTN+ TVDYL+HT+G SK 
Sbjct: 1   MTNFLLKPSLLRLFAQDLRDFTHNNTTIGLKFLSSLSQTPQSTNDPTVDYLIHTIGLSKA 60

Query: 61  SALAAAKRIHLKTTANPDSVIALFKAYGFTLSDTASIFCRHPNLLLADPDTILKPKFEFL 120
           SALAAAK+I LK TA+PDSV+ALF AYGFT S  ASIF R P+LLLA+PDT LKPKFEFL
Sbjct: 61  SALAAAKQIRLKPTAHPDSVLALFNAYGFTPSHIASIFSRRPSLLLANPDTTLKPKFEFL 120

Query: 121 SRNGFTGHVLVDVISRDPSILRRSLKKQIVPCIDFLRNFFGSTDGVVSLFSARRGTWVLR 180
           SRNG +G+ L DVI RDP IL RSL KQIVPCIDFL NFFGSTD +VSLFS    T VL 
Sbjct: 121 SRNGISGNFLADVIDRDPLILCRSLDKQIVPCIDFLINFFGSTDCIVSLFSTAHRTRVLH 180

Query: 181 KFTESVAPNIELLRANGVPDSNIAKIFWMRPRTLARNAEEFSDIVEKTKEAEEQFQSL-F 240
            F+E VAPNIE+LRANGV DSNIAK+ WMRP  L+R+ E F+DIVEKT+E      SL F
Sbjct: 181 TFSEFVAPNIEVLRANGVLDSNIAKLLWMRPIALSRDVEWFTDIVEKTRERGFNPSSLMF 240

Query: 241 LKQPTIMNSSEEQIKKALDFLMNKLDWTHEEISKYPNGGSEVVYSSAPDVKR 291
           +     ++S  +    +   L     W+ E+          V+ SS   +KR
Sbjct: 241 IHGLCTLSSMSKDKWLSKLHLFRSFGWSDEQFQSMFLKKPFVMNSSEEHLKR 292

[Close]

BLAST of CmoCh12G001040 vs. NCBI nr
Match: gi|449442098|ref|XP_004138819.1| (PREDICTED: uncharacterized protein LOC101219073 [Cucumis sativus])

HSP 1 Score: 308.9 bits (790), Expect = 1.0e-80
Identity = 164/271 (60.52%), Postives = 201/271 (74.17%), Query Frame = 1


Query: 1   MTNFLFKVPL-RLFAQDLQKFAGNDTTISRKFLSSLSEISQSTNNRTVDYLVHTLGFSKD 60
           M NFL K  L RL+AQDL+ FA N TTI   FLSSLS+  QSTN+RT+DYL+HT+G SKD
Sbjct: 1   MANFLRKPSLLRLYAQDLRNFAHNKTTIGLNFLSSLSQSPQSTNHRTLDYLIHTIGLSKD 60

Query: 61  SALAAAKRIHLKTTANPDSVIALFKAYGFTLSDTASIFCRHPNLLLADPDTILKPKFEFL 120
           SALAAAK+IHLK +++PDSV+ALF AYGFT S TA+IFCR P LLLADPD  LKPKFEFL
Sbjct: 61  SALAAAKKIHLKPSSDPDSVLALFNAYGFTPSQTANIFCRQPRLLLADPDKTLKPKFEFL 120

Query: 121 SRNGFTGHVLVDVISRDPSILRRSLKKQIVPCIDFLRNFFGSTDGVVSLFSARRGTWVLR 180
           S+NG +G+ LVD+I R+P ILRRSL K+IVPC DFL NFFGSTD +VSLF     T VL 
Sbjct: 121 SKNGISGNFLVDLICREPHILRRSLDKKIVPCFDFLINFFGSTDCIVSLFCTTHRTRVLH 180

Query: 181 KFTESVAPNIELLRANGVPDSNIAKIFWMRPRTLARNAEEFSDIVEKTKEAEEQFQSL-F 240
            F+E +APNIE+LRANGVPDS+IAK+FW RP  L+R+ + F+DIVEKTKE      SL F
Sbjct: 181 TFSEFMAPNIEVLRANGVPDSSIAKLFWKRPVALSRDVKWFTDIVEKTKERGFNPSSLMF 240

Query: 241 LKQPTIMNSSEEQIKKALDFLMNKLDWTHEE 270
           +    I++S  +    +   +     W+ E+
Sbjct: 241 INGLCIVSSMSKDRWLSKLHIFRSYGWSDEQ 271

[Close]

BLAST of CmoCh12G001040 vs. NCBI nr
Match: gi|659089103|ref|XP_008445328.1| (PREDICTED: uncharacterized protein LOC103488393 [Cucumis melo])

HSP 1 Score: 300.1 bits (767), Expect = 4.6e-78
Identity = 167/271 (61.62%), Postives = 194/271 (71.59%), Query Frame = 1


Query: 1   MTNFLFKVPL-RLFAQDLQKFAGNDTTISRKFLSSLSEISQSTNNRTVDYLVHTLGFSKD 60
           M N L K  L R FAQDL+ F  N+TTI  KFLSSLS+  QSTN+RT DYLVHT+G  KD
Sbjct: 1   MANSLLKPSLLRPFAQDLRNFTHNNTTIGLKFLSSLSQTPQSTNDRTQDYLVHTIGLPKD 60

Query: 61  SALAAAKRIHLKTTANPDSVIALFKAYGFTLSDTASIFCRHPNLLLADPDTILKPKFEFL 120
           SALAAAK+I LK TA+PDSV+ALF AYGFT S  ASIF +   LLLADPDT LKPK EFL
Sbjct: 61  SALAAAKKIRLKPTADPDSVLALFNAYGFTPSHIASIFSKQSCLLLADPDTTLKPKIEFL 120

Query: 121 SRNGFTGHVLVDVISRDPSILRRSLKKQIVPCIDFLRNFFGSTDGVVSLFSARRGTWVLR 180
           S+NG +G++L DVI RDP IL RSL KQIVPCIDFL NFFGSTDGVV LFSA  GT VL 
Sbjct: 121 SKNGISGNLLADVICRDPHILHRSLDKQIVPCIDFLINFFGSTDGVVLLFSAGGGTRVLE 180

Query: 181 KFTESVAPNIELLRANGVPDSNIAKIFWMRPRTLARNAEEFSDIVEKTKEAEEQFQSLFL 240
            F+ES+APN+E+LRANGVPDSNIAK+  +RP  L+++ E F DIVEKTKE      SL  
Sbjct: 181 TFSESMAPNVEVLRANGVPDSNIAKMLSLRPIALSKDVEHFIDIVEKTKEMGLNPSSLMF 240

Query: 241 KQPTIMNSSEEQIK-KALDFLMNKLDWTHEE 270
                M +S  + K  +   L     W+ E+
Sbjct: 241 IHGMCMIASMSKDKWLSKVHLFKSFGWSDEQ 271

[Close]

BLAST of CmoCh12G001040 vs. NCBI nr
Match: gi|659068543|ref|XP_008444984.1| (PREDICTED: uncharacterized protein LOC103488160 [Cucumis melo])

HSP 1 Score: 299.3 bits (765), Expect = 7.9e-78
Identity = 168/271 (61.99%), Postives = 194/271 (71.59%), Query Frame = 1


Query: 1   MTNFLFKVPL-RLFAQDLQKFAGNDTTISRKFLSSLSEISQSTNNRTVDYLVHTLGFSKD 60
           M N L K  L RLFAQDLQ F  N+TTI  K LSSLS+  QSTN+RT+DYLVHT+G  KD
Sbjct: 1   MANSLLKPSLLRLFAQDLQNFTHNNTTIGLKLLSSLSQTPQSTNDRTLDYLVHTIGLPKD 60

Query: 61  SALAAAKRIHLKTTANPDSVIALFKAYGFTLSDTASIFCRHPNLLLADPDTILKPKFEFL 120
           SALAAAK+  LK TA+PDSV+ALF AYGFT S  ASIF +   LLLA+PDT LKPK EFL
Sbjct: 61  SALAAAKKTRLKPTADPDSVLALFNAYGFTPSHIASIFSKQSRLLLANPDTTLKPKLEFL 120

Query: 121 SRNGFTGHVLVDVISRDPSILRRSLKKQIVPCIDFLRNFFGSTDGVVSLFSARRGTWVLR 180
           S+NG +G++LV+VI RDP IL RSL KQIVPCIDFLRNFFGSTDGVV LFSA  GT VL 
Sbjct: 121 SKNGISGNLLVNVICRDPYILSRSLDKQIVPCIDFLRNFFGSTDGVVLLFSAGGGTRVLE 180

Query: 181 KFTESVAPNIELLRANGVPDSNIAKIFWMRPRTLARNAEEFSDIVEKTKEAEEQFQSLFL 240
            F+ES+APNIE+LRANGV DSNIAK+  +RP  L+R+ E F DIVEK KE      SL  
Sbjct: 181 TFSESMAPNIEVLRANGVLDSNIAKMLSLRPIALSRDVENFIDIVEKAKEIGLNPSSLMF 240

Query: 241 KQPTIMNSSEEQIK-KALDFLMNKLDWTHEE 270
                M SS  + K  +   L     W+ E+
Sbjct: 241 IHGLCMISSMSKDKWLSKVHLFKSFGWSDEQ 271

[Close]

BLAST of CmoCh12G001040 vs. NCBI nr
Match: gi|1009119129|ref|XP_015876211.1| (PREDICTED: uncharacterized protein LOC107412900 [Ziziphus jujuba])

HSP 1 Score: 211.8 bits (538), Expect = 1.7e-51
Identity = 125/294 (42.52%), Postives = 175/294 (59.52%), Query Frame = 1


Query: 1   MTNFLFKVPLRLFAQDL---QKFAGNDTTISR----KFLSSLSEISQSTNNRTVDYLVHT 60
           M  FL K+PLRL    +        N   I +    K LS+LS  S S+++ TVDY +++
Sbjct: 1   MFRFLSKIPLRLPQVAIFIIPTSNANSNAIGQQLFLKSLSTLSPPSSSSSDSTVDYFINS 60

Query: 61  LGFSKDSALAAAKRIHLKTTANPDSVIALFKAYGFTLSDTASIFCRHPNLLLADPDTILK 120
           LG S DSAL AAK I  + TA  DSV+ LF+ YGF+ +  A IF R P+LLL+DP   LK
Sbjct: 61  LGLSPDSALTAAKLIRRQPTAKSDSVLELFRHYGFSSAQIADIFSRFPSLLLSDPQKNLK 120

Query: 121 PKFEFLSRNGFTGHVLVDVISRDPSILRRSLKKQIVPCIDFLRNFFGSTDG-VVSLFSAR 180
           PK EFLS+NG +G  L+ ++S DP+IL RSL KQI PCI FL+ FF +    +VSL S +
Sbjct: 121 PKLEFLSKNGISGQALLSIVSTDPTILLRSLNKQIEPCIGFLKTFFKNNKAEIVSLLSVK 180

Query: 181 RGTWVLRKFTESVAPNIELLRANGVPDSNIAKIFWMRPRTLARNAEEFSDIVEKTKEAEE 240
           RGTWV+ KF+E++APNIE LR++GV D+ I K+  +RP  L+R A++FS+ V   KE   
Sbjct: 181 RGTWVIHKFSETMAPNIETLRSHGVSDACIKKMIIVRPAALSRFADDFSEFVRVVKEMGF 240

Query: 241 QFQSLFLKQPTIMNSSEEQIKKALDF-LMNKLDWTHEEISKYPNGGSEVVYSSA 286
              S+         S  ++ K      +  +  W+ EE+        +V+ SS+
Sbjct: 241 DPSSVMFIHGVCTFSGMKKDKWVSKMEVFKRFGWSEEEVRSLVVKQPKVMNSSS 294

The following BLAST results are available for this feature:

BLAST of CmoCh12G001040 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmoCh12G001040 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LK19_CUCSA	5.3e-81	59.93	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G346010 PE=4 SV=1	[more]
A0A0A0LQN0_CUCSA	7.0e-81	60.52	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G402010 PE=4 SV=1	[more]
A0A059AAC3_EUCGR	4.6e-40	41.18	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_J00315 PE=4 SV=1	[more]
A0A059A9T0_EUCGR	3.9e-39	40.81	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_J00314 PE=4 SV=1	[more]
A0A059AB47_EUCGR	3.9e-39	40.81	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_J00314 PE=4 SV=1	[more]

BLAST of CmoCh12G001040 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G07900.1	1.2e-26	30.63	Mitochondrial transcription termination factor family protein	[more]
AT1G21150.1	3.8e-22	27.97	Mitochondrial transcription termination factor family protein	[more]
AT5G64950.1	2.4e-16	27.63	Mitochondrial transcription termination factor family protein	[more]
AT1G61970.1	2.4e-16	26.82	Mitochondrial transcription termination factor family protein	[more]
AT3G46950.1	3.1e-16	27.03	Mitochondrial transcription termination factor family protein	[more]

BLAST of CmoCh12G001040 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778670382\|ref\|XP_004143080.2\|	7.6e-81	59.93	PREDICTED: uncharacterized protein LOC101214641 [Cucumis sativus]	[more]
gi\|449442098\|ref\|XP_004138819.1\|	1.0e-80	60.52	PREDICTED: uncharacterized protein LOC101219073 [Cucumis sativus]	[more]
gi\|659089103\|ref\|XP_008445328.1\|	4.6e-78	61.62	PREDICTED: uncharacterized protein LOC103488393 [Cucumis melo]	[more]
gi\|659068543\|ref\|XP_008444984.1\|	7.9e-78	61.99	PREDICTED: uncharacterized protein LOC103488160 [Cucumis melo]	[more]
gi\|1009119129\|ref\|XP_015876211.1\|	1.7e-51	42.52	PREDICTED: uncharacterized protein LOC107412900 [Ziziphus jujuba]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR003690	MTERF

Vocabulary: **Biological Process**
Term	Definition
GO:0006355	regulation of transcription, DNA-templated

Vocabulary: **Molecular Function**
Term	Definition
GO:0003690	double-stranded DNA binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003690	double-stranded DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh12G001040.1	CmoCh12G001040.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	PFAM	PF02536	mTERF	coord: 81..304 score: 1.1
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	SMART	SM00733	mt_12	coord: 130..162 score: 0.15coord: 94..125 score: 0.0028coord: 235..266 score:
None	No IPR available	PANTHER	PTHR13068	CGI-12 PROTEIN-RELATED	coord: 11..275 score: 4.2
None	No IPR available	PANTHER	PTHR13068:SF28	MITOCHONDRIAL TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN-RELATED	coord: 11..275 score: 4.2

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh12G001040	Cucumber (Chinese Long) v3	cmocucB0214
CmoCh12G001040	Watermelon (97103) v2	cmowmbB179
CmoCh12G001040	Wax gourd	cmowgoB0194
CmoCh12G001040	Wax gourd	cmowgoB0211
CmoCh12G001040	Cucurbita moschata (Rifu)	cmocmoB150
CmoCh12G001040	Cucumber (Gy14) v1	cgycmoB0089
CmoCh12G001040	Cucurbita maxima (Rimu)	cmacmoB176
CmoCh12G001040	Cucurbita maxima (Rimu)	cmacmoB765
CmoCh12G001040	Wild cucumber (PI 183967)	cmocpiB184
CmoCh12G001040	Cucumber (Chinese Long) v2	cmocuB180
CmoCh12G001040	Melon (DHL92) v3.5.1	cmomeB147
CmoCh12G001040	Watermelon (Charleston Gray)	cmowcgB162
CmoCh12G001040	Watermelon (97103) v1	cmowmB135
CmoCh12G001040	Cucurbita pepo (Zucchini)	cmocpeB148
CmoCh12G001040	Cucurbita pepo (Zucchini)	cmocpeB174
CmoCh12G001040	Bottle gourd (USVL1VR-Ls)	cmolsiB176
CmoCh12G001040	Cucumber (Gy14) v2	cgybcmoB176
CmoCh12G001040	Cucumber (Gy14) v2	cgybcmoB704
CmoCh12G001040	Melon (DHL92) v3.6.1	cmomedB162
CmoCh12G001040	Silver-seed gourd	carcmoB0194
CmoCh12G001040	Silver-seed gourd	carcmoB0893