CmoCh12G000990 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh12G000990
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Ubiquitin-protein ligase, putative
Location	Cmo_Chr12 : 539606 .. 541552 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGGTGAAGCGCCGTACGGCTTCCACTTTGGTCTCTCGTCTTAGCTCCGTCTCCGAGCAAATCCGGTGCGATTCCCTGTCGGAGCTCCGATTGATGACGAAGAACGACGCTGAGAGCCGATCGCTTATCGCTGAAACTGGTGCTATTCCTTATTTGGCTGAGACTCTGTATTCCTCCTCTCACGCTGCCCAAGAAGACGCCGCTGCTACGCTTCTGAATCTCTCAATTTCCTCCCGTGAAGCTTTGATGTCCACACATGGCCTCCTCGACGCGATTTCTCATGTGCTTGGCCATCATAATTCCTCTTCTTCTGCCGCCGCCGTCCAGTCCTGTGCTGCGACTCTTCATAGTCTTCTCGTTGTGGATGAGTACCGCCCGATTATTGGTTCAAAGCGTGATATAATATATTCGCTTGTTGATATTCTCAAATTTAGGAAATCTCCTCAGAGATCGATTAAGGATGCTCTGAAAGCGTTGTTTGGGATTGCGCTGTGTCAGCCGAATCGGTCCACTATGGTCGATCTCGGAGTGATTCCTCCGTTATTCTCTTTGGTTGTGGTCGGCAGTCACGCCGGGATTGTCGAGGATGCGTCGGCGGTGGTCGCGCAGGTAGCGGGATGTGAAGATAGCGAATTAGCATTTCGTAAGGTTTCCGGATTGGGAGTTTTGGTGGATTTGTTGGATTCAGGAACTGGTTCAAGTCAGAGGACAAAGGAGAACGCGGTATCGGCGTTGTTGAATTTAGCGAGGTGGGGAGGAGAGAGGGCGGAGGAGGACATCAAGGATTTGGGATCTGGAATCTTGAGTGAAATTGGAGATGTGGCCATGAACGGCAGTGAGAAGGGGAAAGCCAAGGCGGTGGAATTGTTGAAGCTAATTGCAAGCGGCGACATCGACGGTAACGTATTCGAGGATTTGCAGTTGGATCGTTTGATAAATTCATGCTCTGAATAGGCTTCTGCTCCATCTTCCTTCTCTCTTTGATTGATTGATTGATTACTCTCCACCATATTCATGTGTGATCGGATTAATTCTTTTTCCCTCGTTCGAACAAATTCCATGTACAAATTCAACATGAATGTATCTGTAGATTATAGTTCAGTATCAAAATTCTACACTTTCCACCTAGAATTCAACAAATTTTCATGTGACTCGCATGATCTTGTGGCTGATCTTTGGTATGTAATCTCTGTTCCACCTAGAATTCAACAAATTTTCATGTGACTCGCATGATCTTGTGGCTGATCTTTGGTATGTAATCTCTGTTCCACCTAGAATTTATGTCTGAAGTCGAGTTGGTATTTAATGGTGAATGTGAATGGATAGAGTTTGAAGCACCATTATGAGGATATGATTCTGTACCTATCTGCTGTTTTGGTTCATTCCATTTCTGGGTTGCTTTCCTTCTTTGTGCTTGTCCTTTTCCTCCTTGTTCTTATCCTATTACCAATCTTTTATCCACTCCATTTTTATAGTGATTTTTATTGCTAACCCAAATCCATGTTCTTCACTTAGCTCACCAAACTCCCACGTCATTCTTCTCCCATTACTTTAGAATGATGAAACCCTTATTGGTATGATGGATGGATGGATGGATGAATAGTAACATTTCATTTGAGTTTTCCTCTTGAATCTGAAAAAGATAGTGAAAAGAGTGTAAAATGTTTTGTATTGCAGATGAACGATGCTAAACAATAGGGCAGAGTTATCGTAGAAAATGTTAGAAACCACGATTGGGATAGTTCAACTTCTTTTTGGCGGTACAAAATGTTAGAAACTCTACTTTGCGCTTAAACTCTCATGGCTTTGCTTTTGGTTTTCCTAAAATGACTCGTACAAACGGAGATGTATTCAACCCCGTAATTACGATGTATTCAACCTTAATTAGTCAATGTGGGACTCCTCTCTCAACAATCCTCCCCTCGAACAAAGCATACCATAGAG

mRNA sequence

ATGGAGGTGAAGCGCCGTACGGCTTCCACTTTGGTCTCTCGTCTTAGCTCCGTCTCCGAGCAAATCCGGTGCGATTCCCTGTCGGAGCTCCGATTGATGACGAAGAACGACGCTGAGAGCCGATCGCTTATCGCTGAAACTGGTGCTATTCCTTATTTGGCTGAGACTCTGTATTCCTCCTCTCACGCTGCCCAAGAAGACGCCGCTGCTACGCTTCTGAATCTCTCAATTTCCTCCCGTGAAGCTTTGATGTCCACACATGGCCTCCTCGACGCGATTTCTCATGTGCTTGGCCATCATAATTCCTCTTCTTCTGCCGCCGCCGTCCAGTCCTGTGCTGCGACTCTTCATAGTCTTCTCGTTGTGGATGAGTACCGCCCGATTATTGGTTCAAAGCGTGATATAATATATTCGCTTGTTGATATTCTCAAATTTAGGAAATCTCCTCAGAGATCGATTAAGGATGCTCTGAAAGCGTTGTTTGGGATTGCGCTGTGTCAGCCGAATCGGTCCACTATGGTCGATCTCGGAGTGATTCCTCCGTTATTCTCTTTGGTTGTGGTCGGCAGTCACGCCGGGATTGTCGAGGATGCGTCGGCGGTGGTCGCGCAGGTAGCGGGATGTGAAGATAGCGAATTAGCATTTCGTAAGGTTTCCGGATTGGGAGTTTTGGTGGATTTGTTGGATTCAGGAACTGGTTCAAGTCAGAGGACAAAGGAGAACGCGGTATCGGCGTTGTTGAATTTAGCGAGGTGGGGAGGAGAGAGGGCGGAGGAGGACATCAAGGATTTGGGATCTGGAATCTTGAGTGAAATTGGAGATGTGGCCATGAACGGCAGTGAGAAGGGGAAAGCCAAGGCGGTGGAATTGTTGAAGCTAATTGCAAGCGGCGACATCGACGGTAACATGAACGATGCTAAACAATAGGGCAGAGTTATCGTAGAAAATGTTAGAAACCACGATTGGGATAGTTCAACTTCTTTTTGGCGGTACAAAATGTTAGAAACTCTACTTTGCGCTTAAACTCTCATGGCTTTGCTTTTGGTTTTCCTAAAATGACTCGTACAAACGGAGATGTATTCAACCCCGTAATTACGATGTATTCAACCTTAATTAGTCAATGTGGGACTCCTCTCTCAACAATCCTCCCCTCGAACAAAGCATACCATAGAG

Coding sequence (CDS)

ATGGAGGTGAAGCGCCGTACGGCTTCCACTTTGGTCTCTCGTCTTAGCTCCGTCTCCGAGCAAATCCGGTGCGATTCCCTGTCGGAGCTCCGATTGATGACGAAGAACGACGCTGAGAGCCGATCGCTTATCGCTGAAACTGGTGCTATTCCTTATTTGGCTGAGACTCTGTATTCCTCCTCTCACGCTGCCCAAGAAGACGCCGCTGCTACGCTTCTGAATCTCTCAATTTCCTCCCGTGAAGCTTTGATGTCCACACATGGCCTCCTCGACGCGATTTCTCATGTGCTTGGCCATCATAATTCCTCTTCTTCTGCCGCCGCCGTCCAGTCCTGTGCTGCGACTCTTCATAGTCTTCTCGTTGTGGATGAGTACCGCCCGATTATTGGTTCAAAGCGTGATATAATATATTCGCTTGTTGATATTCTCAAATTTAGGAAATCTCCTCAGAGATCGATTAAGGATGCTCTGAAAGCGTTGTTTGGGATTGCGCTGTGTCAGCCGAATCGGTCCACTATGGTCGATCTCGGAGTGATTCCTCCGTTATTCTCTTTGGTTGTGGTCGGCAGTCACGCCGGGATTGTCGAGGATGCGTCGGCGGTGGTCGCGCAGGTAGCGGGATGTGAAGATAGCGAATTAGCATTTCGTAAGGTTTCCGGATTGGGAGTTTTGGTGGATTTGTTGGATTCAGGAACTGGTTCAAGTCAGAGGACAAAGGAGAACGCGGTATCGGCGTTGTTGAATTTAGCGAGGTGGGGAGGAGAGAGGGCGGAGGAGGACATCAAGGATTTGGGATCTGGAATCTTGAGTGAAATTGGAGATGTGGCCATGAACGGCAGTGAGAAGGGGAAAGCCAAGGCGGTGGAATTGTTGAAGCTAATTGCAAGCGGCGACATCGACGGTAACATGAACGATGCTAAACAATAG

Homology

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BLAST of CmoCh12G000990 vs. Swiss-Prot
Match: SL11_ORYSJ (E3 ubiquitin-protein ligase SPL11 OS=Oryza sativa subsp. japonica GN=SPL11 PE=1 SV=2)

HSP 1 Score: 124.0 bits (310), Expect = 2.8e-27
Identity = 99/290 (34.14%), Postives = 160/290 (55.17%), Query Frame = 1


Query: 4   KRRTASTLVSRLSSVSEQIRCDSLSELRLMTKNDAESRSLIAETGAIPYLAETLYSSSHA 63
           +R     L+S+L S   + +  + +ELRL+ K +A +R  IAE GAIP L   L SS   
Sbjct: 365 ERANIDALLSKLCSPDTEEQRSAAAELRLLAKRNANNRICIAEAGAIPLLLSLLSSSDLR 424

Query: 64  AQEDAAATLLNLSI-SSREALMSTHGLLDAISHVLGHHNSSSSAAAVQSCAATLHSLLVV 123
            QE A   LLNLSI    +A + + G + +I HVL     + S  A ++ AATL SL V+
Sbjct: 425 TQEHAVTALLNLSIHEDNKASIISSGAVPSIVHVL----KNGSMEARENAAATLFSLSVI 484

Query: 124 DEYRPIIGSKRDIIYSLVDILKFRKSPQRSIKDALKALFGIALCQPNRSTMVDLGVIPPL 183
           DEY+  IG     I +LV +L   +  QR  KDA  ALF + + Q N+   +  G++P +
Sbjct: 485 DEYKVTIGG-MGAIPALVVLL--GEGSQRGKKDAAAALFNLCIYQGNKGRAIRAGLVPLI 544

Query: 184 FSLVVVGSHAGIVEDASAVVAQVAGCEDSELAFRKVSGLGVLVDLLDSGTGSSQRTKENA 243
             LV   + A ++++A A+++ ++   + + A      + VLV+++ SGT    R +ENA
Sbjct: 545 MGLVTNPTGA-LMDEAMAILSILSSHPEGKAAIGAAEPVPVLVEMIGSGT---PRNRENA 604

Query: 244 VSALLNLARWGGERAEEDIKDLGSGILSEIGDVAMNGSEKGKAKAVELLK 293
            + +L+L   G        +    GI+  + ++A+NG+++GK KAV+LL+
Sbjct: 605 AAVMLHLCS-GEHHLVHLARAQECGIMVPLRELALNGTDRGKRKAVQLLE 642

[Close]

BLAST of CmoCh12G000990 vs. Swiss-Prot
Match: SL11_ORYSI (Protein spotted leaf 11 OS=Oryza sativa subsp. indica GN=SPL11 PE=1 SV=2)

HSP 1 Score: 124.0 bits (310), Expect = 2.8e-27
Identity = 99/290 (34.14%), Postives = 160/290 (55.17%), Query Frame = 1


Query: 4   KRRTASTLVSRLSSVSEQIRCDSLSELRLMTKNDAESRSLIAETGAIPYLAETLYSSSHA 63
           +R     L+S+L S   + +  + +ELRL+ K +A +R  IAE GAIP L   L SS   
Sbjct: 365 ERANIDALLSKLCSPDTEEQRSAAAELRLLAKRNANNRICIAEAGAIPLLLSLLSSSDLR 424

Query: 64  AQEDAAATLLNLSI-SSREALMSTHGLLDAISHVLGHHNSSSSAAAVQSCAATLHSLLVV 123
            QE A   LLNLSI    +A + + G + +I HVL     + S  A ++ AATL SL V+
Sbjct: 425 TQEHAVTALLNLSIHEDNKASIISSGAVPSIVHVL----KNGSMEARENAAATLFSLSVI 484

Query: 124 DEYRPIIGSKRDIIYSLVDILKFRKSPQRSIKDALKALFGIALCQPNRSTMVDLGVIPPL 183
           DEY+  IG     I +LV +L   +  QR  KDA  ALF + + Q N+   +  G++P +
Sbjct: 485 DEYKVTIGG-MGAIPALVVLL--GEGSQRGKKDAAAALFNLCIYQGNKGRAIRAGLVPLI 544

Query: 184 FSLVVVGSHAGIVEDASAVVAQVAGCEDSELAFRKVSGLGVLVDLLDSGTGSSQRTKENA 243
             LV   + A ++++A A+++ ++   + + A      + VLV+++ SGT    R +ENA
Sbjct: 545 MGLVTNPTGA-LMDEAMAILSILSSHPEGKAAIGAAEPVPVLVEMIGSGT---PRNRENA 604

Query: 244 VSALLNLARWGGERAEEDIKDLGSGILSEIGDVAMNGSEKGKAKAVELLK 293
            + +L+L   G        +    GI+  + ++A+NG+++GK KAV+LL+
Sbjct: 605 AAVMLHLCS-GEHHLVHLARAQECGIMVPLRELALNGTDRGKRKAVQLLE 642

[Close]

BLAST of CmoCh12G000990 vs. Swiss-Prot
Match: PUB11_ARATH (U-box domain-containing protein 11 OS=Arabidopsis thaliana GN=PUB11 PE=2 SV=2)

HSP 1 Score: 122.1 bits (305), Expect = 1.1e-26
Identity = 97/286 (33.92%), Postives = 159/286 (55.59%), Query Frame = 1


Query: 11  LVSRLSSVSEQIRCDSLSELRLMTKNDAESRSLIAETGAIPYLAETLYSSSHAAQEDAAA 70
           LV RLSS S + R +++SE+R ++K   ++R LIAE GAIP L   L S   A QE+A  
Sbjct: 336 LVQRLSSRSTEDRRNAVSEIRSLSKRSTDNRILIAEAGAIPVLVNLLTSEDVATQENAIT 395

Query: 71  TLLNLSI-SSREALMSTHGLLDAISHVLGHHNSSSSAAAVQSCAATLHSLLVVDEYRPII 130
            +LNLSI  + + L+   G + +I  VL     + +  A ++ AATL SL + DE + II
Sbjct: 396 CVLNLSIYENNKELIMFAGAVTSIVQVL----RAGTMEARENAAATLFSLSLADENKIII 455

Query: 131 GSKRDIIYSLVDILKFRKSPQRSIKDALKALFGIALCQPNRSTMVDLGVIPPLFSLVVVG 190
           G     I +LVD+L+      R  KDA  ALF + +   N+   V  G++  L  ++   
Sbjct: 456 GGS-GAIPALVDLLE--NGTPRGKKDAATALFNLCIYHGNKGRAVRAGIVTALVKMLSDS 515

Query: 191 SHAGIVEDASAVVAQVAGCEDSELAFRKVSGLGVLVDLLDSGTGSSQRTKENAVSALLNL 250
           +   +V++A  +++ +A  +D++ A  K + L  L+ +L +      R +ENA + LL+L
Sbjct: 516 TRHRMVDEALTILSVLANNQDAKSAIVKANTLPALIGILQT---DQTRNRENAAAILLSL 575

Query: 251 ARWGGERAEEDIKDLGS-GILSEIGDVAMNGSEKGKAKAVELLKLI 295
            +    R  E +  +G  G +  + D++ NG+E+GK KA+ LL+L+
Sbjct: 576 CK----RDTEKLITIGRLGAVVPLMDLSKNGTERGKRKAISLLELL 607

[Close]

BLAST of CmoCh12G000990 vs. Swiss-Prot
Match: PUB12_ARATH (U-box domain-containing protein 12 OS=Arabidopsis thaliana GN=PUB12 PE=2 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 5.0e-24
Identity = 94/284 (33.10%), Postives = 152/284 (53.52%), Query Frame = 1


Query: 11  LVSRLSSVSEQIRCDSLSELRLMTKNDAESRSLIAETGAIPYLAETL-YSSSHAAQEDAA 70
           L+ +L+S   + R  +  E+RL+ K +  +R  IA +GAIP L   L  S+    QE A 
Sbjct: 360 LLLKLTSQQPEDRRSAAGEIRLLAKQNNHNRVAIAASGAIPLLVNLLTISNDSRTQEHAV 419

Query: 71  ATLLNLSI--SSREALMSTHGLLDAISHVLGHHNSSSSAAAVQSCAATLHSLLVVDEYRP 130
            ++LNLSI   ++  ++ + G +  I HVL       S  A ++ AATL SL V+DE + 
Sbjct: 420 TSILNLSICQENKGKIVYSSGAVPGIVHVL----QKGSMEARENAAATLFSLSVIDENKV 479

Query: 131 IIGSKRDIIYSLVDILKFRKSPQRSIKDALKALFGIALCQPNRSTMVDLGVIPPLFSLVV 190
            IG+    I  LV +L   +  QR  KDA  ALF + + Q N+   V  G++P L  L +
Sbjct: 480 TIGA-AGAIPPLVTLLS--EGSQRGKKDAATALFNLCIFQGNKGKAVRAGLVPVLMRL-L 539

Query: 191 VGSHAGIVEDASAVVAQVAGCEDSELAFRKVSGLGVLVDLLDSGTGSSQRTKENAVSALL 250
               +G+V+++ +++A ++   D +        + VLVD + SG   S R KEN+ + L+
Sbjct: 540 TEPESGMVDESLSILAILSSHPDGKSEVGAADAVPVLVDFIRSG---SPRNKENSAAVLV 599

Query: 251 NLARWGGERAEEDIKDLGSGILSEIGDVAMNGSEKGKAKAVELL 292
           +L  W  +   E  K    GI+  + ++A NG+++GK KA +LL
Sbjct: 600 HLCSWNQQHLIEAQK---LGIMDLLIEMAENGTDRGKRKAAQLL 629

[Close]

BLAST of CmoCh12G000990 vs. Swiss-Prot
Match: PUB4_ARATH (U-box domain-containing protein 4 OS=Arabidopsis thaliana GN=PUB4 PE=1 SV=3)

HSP 1 Score: 111.7 bits (278), Expect = 1.4e-23
Identity = 94/282 (33.33%), Postives = 156/282 (55.32%), Query Frame = 1


Query: 11  LVSRLSSVSEQIRCDSLSELRLMTKNDAESRSLIAETGAIPYLAETLYSSSHAAQEDAAA 70
           LV  L S S   +  + +ELRL+ K++ ++R +I  +GAI  L E LYS+  A QE+A  
Sbjct: 546 LVEELKSSSLDTQRQATAELRLLAKHNMDNRIVIGNSGAIVLLVELLYSTDSATQENAVT 605

Query: 71  TLLNLSIS-SREALMSTHGLLDAISHVLGHHNSSSSAAAVQSCAATLHSLLVVDEYRPII 130
            LLNLSI+ + +  ++  G ++ + HVL     + S+ A ++ AATL SL V++E +  I
Sbjct: 606 ALLNLSINDNNKKAIADAGAIEPLIHVL----ENGSSEAKENSAATLFSLSVIEENKIKI 665

Query: 131 GSKRDIIYSLVDILKFRKSPQRSIKDALKALFGIALCQPNRSTMVDLGVIPPLFSLVVVG 190
           G +   I  LVD+L       R  KDA  ALF +++ Q N++ +V  G +  L  L  + 
Sbjct: 666 G-QSGAIGPLVDLL--GNGTPRGKKDAATALFNLSIHQENKAMIVQSGAVRYLIDL--MD 725

Query: 191 SHAGIVEDASAVVAQVAGCEDSELAFRKVSGLGVLVDLLDSGTGSSQRTKENAVSALLNL 250
             AG+V+ A AV+A +A   +   A  +  G+ +LV++++ G   S R KENA +ALL L
Sbjct: 726 PAAGMVDKAVAVLANLATIPEGRNAIGQEGGIPLLVEVVELG---SARGKENAAAALLQL 785

Query: 251 ARWGGERAEEDIKDLGSGILSEIGDVAMNGSEKGKAKAVELL 292
           +   G      +++   G +  +  ++ +G+ + + KA  LL
Sbjct: 786 STNSGRFCNMVLQE---GAVPPLVALSQSGTPRAREKAQALL 812

[Close]

BLAST of CmoCh12G000990 vs. TrEMBL
Match: A0A0A0KDY4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G401390 PE=4 SV=1)

HSP 1 Score: 502.3 bits (1292), Expect = 4.2e-139
Identity = 271/308 (87.99%), Postives = 287/308 (93.18%), Query Frame = 1


Query: 1   MEVKRRTASTLVSRLSSVSEQIRCDSLSELRLMTKNDAESRSLIAETGAIPYLAETLYSS 60
           MEVK R  STLVSRLSSVSEQIRC+SLSELRLMTKNDA+SRSLI   GA+PYL+ETLYSS
Sbjct: 1   MEVKGRAVSTLVSRLSSVSEQIRCESLSELRLMTKNDAQSRSLIVHAGALPYLSETLYSS 60

Query: 61  SHAAQEDAAATLLNLSISSREALMSTHGLLDAISHVLGHHNSSSSAAAVQSCAATLHSLL 120
           SH  QEDAAATLLNLSISSREALMSTHGLLDAISHVL HHNSSSS++AVQSCAATLHSLL
Sbjct: 61  SHLPQEDAAATLLNLSISSREALMSTHGLLDAISHVLSHHNSSSSSSAVQSCAATLHSLL 120

Query: 121 VVDEYRPIIGSKRDIIYSLVDILKFRKSPQRSIKDALKALFGIALCQPNRSTMVDLGVIP 180
           VVDEYRPIIGSKRDIIYSLVDILK+RKSPQRSIKDALKALFGIAL Q NRSTMVDLGVIP
Sbjct: 121 VVDEYRPIIGSKRDIIYSLVDILKYRKSPQRSIKDALKALFGIALHQSNRSTMVDLGVIP 180

Query: 181 PLFSLVVVGSHAGIVEDASAVVAQVAGCEDSELAFRKVSGLGVLVDLLDSGTGSSQRTKE 240
           PLFSLVVVG HAGIVEDASAVVAQVAGCE+SELAFR+VSGLGVLVDLLDSGTGSS RTKE
Sbjct: 181 PLFSLVVVGGHAGIVEDASAVVAQVAGCEESELAFRRVSGLGVLVDLLDSGTGSSLRTKE 240

Query: 241 NAVSALLNLARWGGERAEEDIKDLGSGILSEIGDVAMNGSEKGKAKAVELLKLIASGDID 300
           NAVSALLNLA+WGG+RA ED+KDLGSGILSEI DVA+NGSEKGK KAVELLK++ASG ID
Sbjct: 241 NAVSALLNLAKWGGDRAAEDVKDLGSGILSEIADVAVNGSEKGKTKAVELLKMVASGGID 300

Query: 301 GNMNDAKQ 309
           G + D  Q
Sbjct: 301 GKVFDDLQ 308

[Close]

BLAST of CmoCh12G000990 vs. TrEMBL
Match: A0A067HHC1_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g021242mg PE=4 SV=1)

HSP 1 Score: 377.1 bits (967), Expect = 2.1e-101
Identity = 206/304 (67.76%), Postives = 248/304 (81.58%), Query Frame = 1


Query: 1   MEVKRRTASTLVSRLSSVSEQIRCDSLSELRLMTKNDAESRSLIAETGAIPYLAETLYSS 60
           MEVKRRT  +LV++L SVSEQ R ++L+ELRL++K+DAE R +I+E G+IPYLAE LYSS
Sbjct: 1   MEVKRRTVRSLVTKLGSVSEQTRAEALAELRLLSKHDAEIRPMISEAGSIPYLAEILYSS 60

Query: 61  SHAAQEDAAATLLNLSISSREALMSTHGLLDAISHVLGHHNSSSSAAAVQSCAATLHSLL 120
           SHA QE+AAATLLNLSI+SR++LMST GLLDAISHVL HH++S+S+AAVQS AATLHSLL
Sbjct: 61  SHAFQENAAATLLNLSITSRDSLMSTRGLLDAISHVLRHHSTSTSSAAVQSSAATLHSLL 120

Query: 121 VVDEYRPIIGSKRDIIYSLVDILKFRKSPQRSIKDALKALFGIALCQPNRSTMVDLGVIP 180
           VVD YRPIIG+KRDII+SL++I+K R SP RS+KDALKALFGIAL   NR  ++ LG + 
Sbjct: 121 VVDSYRPIIGAKRDIIHSLIEIIKTRNSPLRSVKDALKALFGIALYPLNRYQVIALGGVQ 180

Query: 181 PLFSLVVVGSHAGIVEDASAVVAQVAGCEDSELAFRKVSGLGVLVDLLDSGTGSSQRTKE 240
           PLFSLVV G  AGIVEDASAV+AQ+AGCE+S   F+K  G+GVLVDLLD GTGS  R KE
Sbjct: 181 PLFSLVVNGGRAGIVEDASAVIAQIAGCEESVDEFKKCCGIGVLVDLLDLGTGSGHRVKE 240

Query: 241 NAVSALLNLARWGGERAEEDIKDLGSGILSEIGDVAMNGSEKGKAKAVELLKLIASGDID 300
           NAVSALLNL  +GGERA E++K++   +   I DVA NGS KGK KAV LLK++     D
Sbjct: 241 NAVSALLNLVNFGGERAAEEVKEMAMQVADGIADVAQNGSAKGKTKAVALLKILVD---D 300

Query: 301 GNMN 305
           GNMN
Sbjct: 301 GNMN 301

[Close]

BLAST of CmoCh12G000990 vs. TrEMBL
Match: V4TV70_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10021235mg PE=4 SV=1)

HSP 1 Score: 377.1 bits (967), Expect = 2.1e-101
Identity = 206/304 (67.76%), Postives = 248/304 (81.58%), Query Frame = 1


Query: 1   MEVKRRTASTLVSRLSSVSEQIRCDSLSELRLMTKNDAESRSLIAETGAIPYLAETLYSS 60
           MEVKRRT  +LV++L SVSEQ R ++L+ELRL++K+DAE R +I+E G+IPYLAE LYSS
Sbjct: 1   MEVKRRTVRSLVTKLGSVSEQTRAEALAELRLLSKHDAEIRPMISEAGSIPYLAEILYSS 60

Query: 61  SHAAQEDAAATLLNLSISSREALMSTHGLLDAISHVLGHHNSSSSAAAVQSCAATLHSLL 120
           SHA QE+AAATLLNLSI+SR++LMST GLLDAISHVL HH++S+S+AAVQS AATLHSLL
Sbjct: 61  SHAFQENAAATLLNLSITSRDSLMSTRGLLDAISHVLRHHSTSTSSAAVQSSAATLHSLL 120

Query: 121 VVDEYRPIIGSKRDIIYSLVDILKFRKSPQRSIKDALKALFGIALCQPNRSTMVDLGVIP 180
           VVD YRPIIG+KRDII+SL++I+K R SP RS+KDALKALFGIAL   NR  ++ LG + 
Sbjct: 121 VVDSYRPIIGAKRDIIHSLIEIIKTRNSPLRSVKDALKALFGIALYPLNRYQVIALGGVQ 180

Query: 181 PLFSLVVVGSHAGIVEDASAVVAQVAGCEDSELAFRKVSGLGVLVDLLDSGTGSSQRTKE 240
           PLFSLVV G  AGIVEDASAV+AQ+AGCE+S   F+K  G+GVLVDLLD GTGS  R KE
Sbjct: 181 PLFSLVVNGGRAGIVEDASAVIAQIAGCEESVDEFKKCCGIGVLVDLLDLGTGSGHRVKE 240

Query: 241 NAVSALLNLARWGGERAEEDIKDLGSGILSEIGDVAMNGSEKGKAKAVELLKLIASGDID 300
           NAVSALLNL  +GGERA E++K++   +   I DVA NGS KGK KAV LLK++     D
Sbjct: 241 NAVSALLNLVNFGGERAAEEVKEMAMQVADGIADVAQNGSAKGKTKAVALLKILVD---D 300

Query: 301 GNMN 305
           GNMN
Sbjct: 301 GNMN 301

[Close]

BLAST of CmoCh12G000990 vs. TrEMBL
Match: V4U5E9_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10021235mg PE=4 SV=1)

HSP 1 Score: 374.8 bits (961), Expect = 1.0e-100
Identity = 205/303 (67.66%), Postives = 247/303 (81.52%), Query Frame = 1


Query: 1   MEVKRRTASTLVSRLSSVSEQIRCDSLSELRLMTKNDAESRSLIAETGAIPYLAETLYSS 60
           MEVKRRT  +LV++L SVSEQ R ++L+ELRL++K+DAE R +I+E G+IPYLAE LYSS
Sbjct: 1   MEVKRRTVRSLVTKLGSVSEQTRAEALAELRLLSKHDAEIRPMISEAGSIPYLAEILYSS 60

Query: 61  SHAAQEDAAATLLNLSISSREALMSTHGLLDAISHVLGHHNSSSSAAAVQSCAATLHSLL 120
           SHA QE+AAATLLNLSI+SR++LMST GLLDAISHVL HH++S+S+AAVQS AATLHSLL
Sbjct: 61  SHAFQENAAATLLNLSITSRDSLMSTRGLLDAISHVLRHHSTSTSSAAVQSSAATLHSLL 120

Query: 121 VVDEYRPIIGSKRDIIYSLVDILKFRKSPQRSIKDALKALFGIALCQPNRSTMVDLGVIP 180
           VVD YRPIIG+KRDII+SL++I+K R SP RS+KDALKALFGIAL   NR  ++ LG + 
Sbjct: 121 VVDSYRPIIGAKRDIIHSLIEIIKTRNSPLRSVKDALKALFGIALYPLNRYQVIALGGVQ 180

Query: 181 PLFSLVVVGSHAGIVEDASAVVAQVAGCEDSELAFRKVSGLGVLVDLLDSGTGSSQRTKE 240
           PLFSLVV G  AGIVEDASAV+AQ+AGCE+S   F+K  G+GVLVDLLD GTGS  R KE
Sbjct: 181 PLFSLVVNGGRAGIVEDASAVIAQIAGCEESVDEFKKCCGIGVLVDLLDLGTGSGHRVKE 240

Query: 241 NAVSALLNLARWGGERAEEDIKDLGSGILSEIGDVAMNGSEKGKAKAVELLKLIASGDID 300
           NAVSALLNL  +GGERA E++K++   +   I DVA NGS KGK KAV LLK++     D
Sbjct: 241 NAVSALLNLVNFGGERAAEEVKEMAMQVADGIADVAQNGSAKGKTKAVALLKILVD---D 300

Query: 301 GNM 304
           GNM
Sbjct: 301 GNM 300

[Close]

BLAST of CmoCh12G000990 vs. TrEMBL
Match: B9RG87_RICCO (Ubiquitin-protein ligase, putative OS=Ricinus communis GN=RCOM_1452200 PE=4 SV=1)

HSP 1 Score: 374.4 bits (960), Expect = 1.3e-100
Identity = 200/297 (67.34%), Postives = 244/297 (82.15%), Query Frame = 1


Query: 1   MEVKRRTASTLVSRLSSVSEQIRCDSLSELRLMTKNDAESRSLIAETGAIPYLAETLYSS 60
           MEVKRRTA +LVS+LSSVSEQ R ++LSELRL+TK+D +SR +IAE GAIPYLAETLYSS
Sbjct: 1   MEVKRRTARSLVSKLSSVSEQTRSEALSELRLITKHDPDSRPIIAECGAIPYLAETLYSS 60

Query: 61  SHAAQEDAAATLLNLSISSREALMSTHGLLDAISHVLGHHNSSSSAAAVQSCAATLHSLL 120
           SH AQE+AAATLLNLSIS+R++LMST GLLDA+ H L HH++++S  AVQS AATLHSLL
Sbjct: 61  SHTAQENAAATLLNLSISTRDSLMSTRGLLDALGHALSHHSTTTSPLAVQSSAATLHSLL 120

Query: 121 VVDEYRPIIGSKRDIIYSLVDILKFRKSPQRSIKDALKALFGIALCQPNRSTMVDLGVIP 180
           +VD YRPIIGSKRDI+YSL+DI+K   SP RS+KDALKA+FGIAL   NR T++DLG + 
Sbjct: 121 IVDSYRPIIGSKRDIVYSLIDIVKSPNSPPRSVKDALKAMFGIALYPLNRCTLIDLGAVA 180

Query: 181 PLFSLVVVGSHAGIVEDASAVVAQVAGCEDSELAFRKVSGLGVLVDLLDSGTGSSQRTKE 240
           PLFSLV+     GIVEDA+AVVAQ+AGCE+SE  F + SG+G+L+DLLD  TGSS R KE
Sbjct: 181 PLFSLVLKDGRVGIVEDATAVVAQIAGCEESEGEFARYSGVGILIDLLDLATGSSLRIKE 240

Query: 241 NAVSALLNLARWGGERAEEDIKDLGSGILSEIGDVAMNGSEKGKAKAVELLKLIASG 298
           NAVSALLNL R GGER   D++D+ + ++  I +VA NG+ KGKAKAV L+K+I  G
Sbjct: 241 NAVSALLNLVRCGGERVAADVRDMAAIVVEGIKEVAENGTSKGKAKAVALVKVIEGG 297

[Close]

BLAST of CmoCh12G000990 vs. TAIR10
Match: AT1G08315.1 (AT1G08315.1 ARM repeat superfamily protein)

HSP 1 Score: 337.8 bits (865), Expect = 7.0e-93
Identity = 194/305 (63.61%), Postives = 236/305 (77.38%), Query Frame = 1


Query: 4   KRRTASTLVSRLSSVSEQIRCDSLSELRLMTKNDAESRSLIAETGAIPYLAETLYSSSHA 63
           KRRT ST+VSRLSSVSEQ R  +L+ELRL++K D +SR +IA+ GAIPYLAETLYSSSH+
Sbjct: 5   KRRTMSTIVSRLSSVSEQTRAAALAELRLISKQDPDSRLIIADAGAIPYLAETLYSSSHS 64

Query: 64  AQEDAAATLLNLSISSREALMSTHGLLDAISHVLGHHNSSSSAAAVQSCAATLHSLLVVD 123
           +QE+AAATLLNLSI+SRE LMS+ GLLDA+SH L HH++++S AAVQS AAT++SLL+ +
Sbjct: 65  SQENAAATLLNLSITSREPLMSSRGLLDALSHALRHHDTTTSPAAVQSSAATIYSLLIAE 124

Query: 124 E-YRPIIGSKRDIIYSLVDILKFRKSPQRSIKDALKALFGIALCQPNRSTMVDLGVIPPL 183
           E YRPIIGSKRDII+SL+ I+++  S  RSIKD+LKALF IAL   NRSTM+ LG IP L
Sbjct: 125 ESYRPIIGSKRDIIFSLIHIIRYPDSHPRSIKDSLKALFAIALYPMNRSTMISLGAIPAL 184

Query: 184 FSLVVVGSHAGIVEDASAVVAQVAGCEDSELAFRKVSGLGVLVDLLDSGTGSSQRTKENA 243
           FSL+V  S  GIVEDA+AV+AQVAGCEDSE   R+VSG  VL DLLD  TGSS R KEN+
Sbjct: 185 FSLIVKDSRCGIVEDATAVMAQVAGCEDSEDGMRRVSGANVLADLLDPCTGSSLRIKENS 244

Query: 244 VSALLNLARWGGERAEEDI-----KDLGSGILSEIGDVAMNGSEKGKAKAVELLKLIASG 303
           V ALLNLAR GG  A  ++          G +  I  VA NGS KG+ KAV+LLKL+ SG
Sbjct: 245 VGALLNLARCGGAAARSEVAAAVASGADEGAMEGIVYVAENGSLKGRKKAVDLLKLVVSG 304

[Close]

BLAST of CmoCh12G000990 vs. TAIR10
Match: AT1G23030.1 (AT1G23030.1 ARM repeat superfamily protein)

HSP 1 Score: 122.1 bits (305), Expect = 6.0e-28
Identity = 97/286 (33.92%), Postives = 159/286 (55.59%), Query Frame = 1


Query: 11  LVSRLSSVSEQIRCDSLSELRLMTKNDAESRSLIAETGAIPYLAETLYSSSHAAQEDAAA 70
           LV RLSS S + R +++SE+R ++K   ++R LIAE GAIP L   L S   A QE+A  
Sbjct: 336 LVQRLSSRSTEDRRNAVSEIRSLSKRSTDNRILIAEAGAIPVLVNLLTSEDVATQENAIT 395

Query: 71  TLLNLSI-SSREALMSTHGLLDAISHVLGHHNSSSSAAAVQSCAATLHSLLVVDEYRPII 130
            +LNLSI  + + L+   G + +I  VL     + +  A ++ AATL SL + DE + II
Sbjct: 396 CVLNLSIYENNKELIMFAGAVTSIVQVL----RAGTMEARENAAATLFSLSLADENKIII 455

Query: 131 GSKRDIIYSLVDILKFRKSPQRSIKDALKALFGIALCQPNRSTMVDLGVIPPLFSLVVVG 190
           G     I +LVD+L+      R  KDA  ALF + +   N+   V  G++  L  ++   
Sbjct: 456 GGS-GAIPALVDLLE--NGTPRGKKDAATALFNLCIYHGNKGRAVRAGIVTALVKMLSDS 515

Query: 191 SHAGIVEDASAVVAQVAGCEDSELAFRKVSGLGVLVDLLDSGTGSSQRTKENAVSALLNL 250
           +   +V++A  +++ +A  +D++ A  K + L  L+ +L +      R +ENA + LL+L
Sbjct: 516 TRHRMVDEALTILSVLANNQDAKSAIVKANTLPALIGILQT---DQTRNRENAAAILLSL 575

Query: 251 ARWGGERAEEDIKDLGS-GILSEIGDVAMNGSEKGKAKAVELLKLI 295
            +    R  E +  +G  G +  + D++ NG+E+GK KA+ LL+L+
Sbjct: 576 CK----RDTEKLITIGRLGAVVPLMDLSKNGTERGKRKAISLLELL 607

[Close]

BLAST of CmoCh12G000990 vs. TAIR10
Match: AT2G28830.1 (AT2G28830.1 PLANT U-BOX 12)

HSP 1 Score: 113.2 bits (282), Expect = 2.8e-25
Identity = 94/284 (33.10%), Postives = 152/284 (53.52%), Query Frame = 1


Query: 11  LVSRLSSVSEQIRCDSLSELRLMTKNDAESRSLIAETGAIPYLAETL-YSSSHAAQEDAA 70
           L+ +L+S   + R  +  E+RL+ K +  +R  IA +GAIP L   L  S+    QE A 
Sbjct: 360 LLLKLTSQQPEDRRSAAGEIRLLAKQNNHNRVAIAASGAIPLLVNLLTISNDSRTQEHAV 419

Query: 71  ATLLNLSI--SSREALMSTHGLLDAISHVLGHHNSSSSAAAVQSCAATLHSLLVVDEYRP 130
            ++LNLSI   ++  ++ + G +  I HVL       S  A ++ AATL SL V+DE + 
Sbjct: 420 TSILNLSICQENKGKIVYSSGAVPGIVHVL----QKGSMEARENAAATLFSLSVIDENKV 479

Query: 131 IIGSKRDIIYSLVDILKFRKSPQRSIKDALKALFGIALCQPNRSTMVDLGVIPPLFSLVV 190
            IG+    I  LV +L   +  QR  KDA  ALF + + Q N+   V  G++P L  L +
Sbjct: 480 TIGA-AGAIPPLVTLLS--EGSQRGKKDAATALFNLCIFQGNKGKAVRAGLVPVLMRL-L 539

Query: 191 VGSHAGIVEDASAVVAQVAGCEDSELAFRKVSGLGVLVDLLDSGTGSSQRTKENAVSALL 250
               +G+V+++ +++A ++   D +        + VLVD + SG   S R KEN+ + L+
Sbjct: 540 TEPESGMVDESLSILAILSSHPDGKSEVGAADAVPVLVDFIRSG---SPRNKENSAAVLV 599

Query: 251 NLARWGGERAEEDIKDLGSGILSEIGDVAMNGSEKGKAKAVELL 292
           +L  W  +   E  K    GI+  + ++A NG+++GK KA +LL
Sbjct: 600 HLCSWNQQHLIEAQK---LGIMDLLIEMAENGTDRGKRKAAQLL 629

[Close]

BLAST of CmoCh12G000990 vs. TAIR10
Match: AT2G23140.1 (AT2G23140.1 RING/U-box superfamily protein with ARM repeat domain)

HSP 1 Score: 111.7 bits (278), Expect = 8.1e-25
Identity = 94/282 (33.33%), Postives = 156/282 (55.32%), Query Frame = 1


Query: 11  LVSRLSSVSEQIRCDSLSELRLMTKNDAESRSLIAETGAIPYLAETLYSSSHAAQEDAAA 70
           LV  L S S   +  + +ELRL+ K++ ++R +I  +GAI  L E LYS+  A QE+A  
Sbjct: 549 LVEELKSSSLDTQRQATAELRLLAKHNMDNRIVIGNSGAIVLLVELLYSTDSATQENAVT 608

Query: 71  TLLNLSIS-SREALMSTHGLLDAISHVLGHHNSSSSAAAVQSCAATLHSLLVVDEYRPII 130
            LLNLSI+ + +  ++  G ++ + HVL     + S+ A ++ AATL SL V++E +  I
Sbjct: 609 ALLNLSINDNNKKAIADAGAIEPLIHVL----ENGSSEAKENSAATLFSLSVIEENKIKI 668

Query: 131 GSKRDIIYSLVDILKFRKSPQRSIKDALKALFGIALCQPNRSTMVDLGVIPPLFSLVVVG 190
           G +   I  LVD+L       R  KDA  ALF +++ Q N++ +V  G +  L  L  + 
Sbjct: 669 G-QSGAIGPLVDLL--GNGTPRGKKDAATALFNLSIHQENKAMIVQSGAVRYLIDL--MD 728

Query: 191 SHAGIVEDASAVVAQVAGCEDSELAFRKVSGLGVLVDLLDSGTGSSQRTKENAVSALLNL 250
             AG+V+ A AV+A +A   +   A  +  G+ +LV++++ G   S R KENA +ALL L
Sbjct: 729 PAAGMVDKAVAVLANLATIPEGRNAIGQEGGIPLLVEVVELG---SARGKENAAAALLQL 788

Query: 251 ARWGGERAEEDIKDLGSGILSEIGDVAMNGSEKGKAKAVELL 292
           +   G      +++   G +  +  ++ +G+ + + KA  LL
Sbjct: 789 STNSGRFCNMVLQE---GAVPPLVALSQSGTPRAREKAQALL 815

[Close]

BLAST of CmoCh12G000990 vs. TAIR10
Match: AT5G42340.1 (AT5G42340.1 Plant U-Box 15)

HSP 1 Score: 109.4 bits (272), Expect = 4.0e-24
Identity = 91/291 (31.27%), Postives = 152/291 (52.23%), Query Frame = 1


Query: 9   STLVSRLSSVSEQIRCDSLSELRLMTKNDAESRSLIAETGAIPYLAETLYSSSHAAQEDA 68
           S LV  LSS   + +  S+ ++RL+ + + E+R LIA  GAIP L + L       QE+A
Sbjct: 382 SLLVEALSSSQLEEQRRSVKQMRLLARENPENRVLIANAGAIPLLVQLLSYPDSGIQENA 441

Query: 69  AATLLNLSISS-REALMSTHGLLDAISHVLGHHNSSSSAAAVQSCAATLHSLLVVDEYRP 128
             TLLNLSI    + L+S  G +  I  +L + N      A ++ AA L SL ++DE + 
Sbjct: 442 VTTLLNLSIDEVNKKLISNEGAIPNIIEILENGNRE----ARENSAAALFSLSMLDENKV 501

Query: 129 IIGSKRDIIYSLVDILKFRKSPQRSIKDALKALFGIALCQPNRSTMVDLGVIPPLFSLVV 188
            IG     I  LVD+L  +    R  KDAL ALF ++L   N+   +D G++ PL +L +
Sbjct: 502 TIGLSNG-IPPLVDLL--QHGTLRGKKDALTALFNLSLNSANKGRAIDAGIVQPLLNL-L 561

Query: 189 VGSHAGIVEDASAVVAQVAGCEDSELAFRKVSGLGVLVDLLDSGTGSSQRTKENAVSALL 248
              + G++++A +++  +A   +   A  ++S +  LV+ +  GT    + KE A S LL
Sbjct: 562 KDKNLGMIDEALSILLLLASHPEGRQAIGQLSFIETLVEFIRQGT---PKNKECATSVLL 621

Query: 249 NLARWGGERAEEDIKDLGSGILSEIGDVAMNGSEKGKAKAVELLKLIASGD 299
            L   G   +   +  L  G+   + ++  +G+ + + KA  L++LI+  +
Sbjct: 622 EL---GSNNSSFILAALQFGVYEYLVEITTSGTNRAQRKANALIQLISKSE 658

[Close]

BLAST of CmoCh12G000990 vs. NCBI nr
Match: gi|659089251|ref|XP_008445408.1| (PREDICTED: protein spotted leaf 11 [Cucumis melo])

HSP 1 Score: 508.1 bits (1307), Expect = 1.1e-140
Identity = 272/303 (89.77%), Postives = 287/303 (94.72%), Query Frame = 1


Query: 1   MEVKRRTASTLVSRLSSVSEQIRCDSLSELRLMTKNDAESRSLIAETGAIPYLAETLYSS 60
           MEVKRRT STLVSRLSSVSEQ RC+SLSELRLMTKND ESRSLI E GA+PYL+ETLYSS
Sbjct: 1   MEVKRRTVSTLVSRLSSVSEQTRCESLSELRLMTKNDVESRSLIVEAGALPYLSETLYSS 60

Query: 61  SHAAQEDAAATLLNLSISSREALMSTHGLLDAISHVLGHHNSSSSAAAVQSCAATLHSLL 120
           SH AQEDAAATLLNLSISSR+ALMSTHGLLDAISHVL HHNSSSSA+AVQSC ATLHSLL
Sbjct: 61  SHVAQEDAAATLLNLSISSRQALMSTHGLLDAISHVLSHHNSSSSASAVQSCGATLHSLL 120

Query: 121 VVDEYRPIIGSKRDIIYSLVDILKFRKSPQRSIKDALKALFGIALCQPNRSTMVDLGVIP 180
           VVDEYRPIIGSKRDIIYSLVDILK+RKSPQRSIKDALKALFGIAL Q NRSTMVDLGVIP
Sbjct: 121 VVDEYRPIIGSKRDIIYSLVDILKYRKSPQRSIKDALKALFGIALHQSNRSTMVDLGVIP 180

Query: 181 PLFSLVVVGSHAGIVEDASAVVAQVAGCEDSELAFRKVSGLGVLVDLLDSGTGSSQRTKE 240
           PLFSLVVVG HAGIVEDASAVVAQVAGCE+SELAFR+VSGLGVLVDLLDSGTGSS RTKE
Sbjct: 181 PLFSLVVVGGHAGIVEDASAVVAQVAGCEESELAFRRVSGLGVLVDLLDSGTGSSLRTKE 240

Query: 241 NAVSALLNLARWGGERAEEDIKDLGSGILSEIGDVAMNGSEKGKAKAVELLKLIASGDID 300
           NAVSALLNLA+WGG+RA ED+KDLGSGILSEI DVA+NGSEKGK KAVELLK++ASG ID
Sbjct: 241 NAVSALLNLAKWGGDRAAEDVKDLGSGILSEIADVAVNGSEKGKTKAVELLKMVASGGID 300

Query: 301 GNM 304
           GN+
Sbjct: 301 GNV 303

[Close]

BLAST of CmoCh12G000990 vs. NCBI nr
Match: gi|449458065|ref|XP_004146768.1| (PREDICTED: protein spotted leaf 11 [Cucumis sativus])

HSP 1 Score: 502.3 bits (1292), Expect = 6.1e-139
Identity = 271/308 (87.99%), Postives = 287/308 (93.18%), Query Frame = 1


Query: 1   MEVKRRTASTLVSRLSSVSEQIRCDSLSELRLMTKNDAESRSLIAETGAIPYLAETLYSS 60
           MEVK R  STLVSRLSSVSEQIRC+SLSELRLMTKNDA+SRSLI   GA+PYL+ETLYSS
Sbjct: 1   MEVKGRAVSTLVSRLSSVSEQIRCESLSELRLMTKNDAQSRSLIVHAGALPYLSETLYSS 60

Query: 61  SHAAQEDAAATLLNLSISSREALMSTHGLLDAISHVLGHHNSSSSAAAVQSCAATLHSLL 120
           SH  QEDAAATLLNLSISSREALMSTHGLLDAISHVL HHNSSSS++AVQSCAATLHSLL
Sbjct: 61  SHLPQEDAAATLLNLSISSREALMSTHGLLDAISHVLSHHNSSSSSSAVQSCAATLHSLL 120

Query: 121 VVDEYRPIIGSKRDIIYSLVDILKFRKSPQRSIKDALKALFGIALCQPNRSTMVDLGVIP 180
           VVDEYRPIIGSKRDIIYSLVDILK+RKSPQRSIKDALKALFGIAL Q NRSTMVDLGVIP
Sbjct: 121 VVDEYRPIIGSKRDIIYSLVDILKYRKSPQRSIKDALKALFGIALHQSNRSTMVDLGVIP 180

Query: 181 PLFSLVVVGSHAGIVEDASAVVAQVAGCEDSELAFRKVSGLGVLVDLLDSGTGSSQRTKE 240
           PLFSLVVVG HAGIVEDASAVVAQVAGCE+SELAFR+VSGLGVLVDLLDSGTGSS RTKE
Sbjct: 181 PLFSLVVVGGHAGIVEDASAVVAQVAGCEESELAFRRVSGLGVLVDLLDSGTGSSLRTKE 240

Query: 241 NAVSALLNLARWGGERAEEDIKDLGSGILSEIGDVAMNGSEKGKAKAVELLKLIASGDID 300
           NAVSALLNLA+WGG+RA ED+KDLGSGILSEI DVA+NGSEKGK KAVELLK++ASG ID
Sbjct: 241 NAVSALLNLAKWGGDRAAEDVKDLGSGILSEIADVAVNGSEKGKTKAVELLKMVASGGID 300

Query: 301 GNMNDAKQ 309
           G + D  Q
Sbjct: 301 GKVFDDLQ 308

[Close]

BLAST of CmoCh12G000990 vs. NCBI nr
Match: gi|567903358|ref|XP_006444167.1| (hypothetical protein CICLE_v10021235mg [Citrus clementina])

HSP 1 Score: 377.1 bits (967), Expect = 2.9e-101
Identity = 206/304 (67.76%), Postives = 248/304 (81.58%), Query Frame = 1


Query: 1   MEVKRRTASTLVSRLSSVSEQIRCDSLSELRLMTKNDAESRSLIAETGAIPYLAETLYSS 60
           MEVKRRT  +LV++L SVSEQ R ++L+ELRL++K+DAE R +I+E G+IPYLAE LYSS
Sbjct: 1   MEVKRRTVRSLVTKLGSVSEQTRAEALAELRLLSKHDAEIRPMISEAGSIPYLAEILYSS 60

Query: 61  SHAAQEDAAATLLNLSISSREALMSTHGLLDAISHVLGHHNSSSSAAAVQSCAATLHSLL 120
           SHA QE+AAATLLNLSI+SR++LMST GLLDAISHVL HH++S+S+AAVQS AATLHSLL
Sbjct: 61  SHAFQENAAATLLNLSITSRDSLMSTRGLLDAISHVLRHHSTSTSSAAVQSSAATLHSLL 120

Query: 121 VVDEYRPIIGSKRDIIYSLVDILKFRKSPQRSIKDALKALFGIALCQPNRSTMVDLGVIP 180
           VVD YRPIIG+KRDII+SL++I+K R SP RS+KDALKALFGIAL   NR  ++ LG + 
Sbjct: 121 VVDSYRPIIGAKRDIIHSLIEIIKTRNSPLRSVKDALKALFGIALYPLNRYQVIALGGVQ 180

Query: 181 PLFSLVVVGSHAGIVEDASAVVAQVAGCEDSELAFRKVSGLGVLVDLLDSGTGSSQRTKE 240
           PLFSLVV G  AGIVEDASAV+AQ+AGCE+S   F+K  G+GVLVDLLD GTGS  R KE
Sbjct: 181 PLFSLVVNGGRAGIVEDASAVIAQIAGCEESVDEFKKCCGIGVLVDLLDLGTGSGHRVKE 240

Query: 241 NAVSALLNLARWGGERAEEDIKDLGSGILSEIGDVAMNGSEKGKAKAVELLKLIASGDID 300
           NAVSALLNL  +GGERA E++K++   +   I DVA NGS KGK KAV LLK++     D
Sbjct: 241 NAVSALLNLVNFGGERAAEEVKEMAMQVADGIADVAQNGSAKGKTKAVALLKILVD---D 300

Query: 301 GNMN 305
           GNMN
Sbjct: 301 GNMN 301

[Close]

BLAST of CmoCh12G000990 vs. NCBI nr
Match: gi|567903356|ref|XP_006444166.1| (hypothetical protein CICLE_v10021235mg [Citrus clementina])

HSP 1 Score: 374.8 bits (961), Expect = 1.5e-100
Identity = 205/303 (67.66%), Postives = 247/303 (81.52%), Query Frame = 1


Query: 1   MEVKRRTASTLVSRLSSVSEQIRCDSLSELRLMTKNDAESRSLIAETGAIPYLAETLYSS 60
           MEVKRRT  +LV++L SVSEQ R ++L+ELRL++K+DAE R +I+E G+IPYLAE LYSS
Sbjct: 1   MEVKRRTVRSLVTKLGSVSEQTRAEALAELRLLSKHDAEIRPMISEAGSIPYLAEILYSS 60

Query: 61  SHAAQEDAAATLLNLSISSREALMSTHGLLDAISHVLGHHNSSSSAAAVQSCAATLHSLL 120
           SHA QE+AAATLLNLSI+SR++LMST GLLDAISHVL HH++S+S+AAVQS AATLHSLL
Sbjct: 61  SHAFQENAAATLLNLSITSRDSLMSTRGLLDAISHVLRHHSTSTSSAAVQSSAATLHSLL 120

Query: 121 VVDEYRPIIGSKRDIIYSLVDILKFRKSPQRSIKDALKALFGIALCQPNRSTMVDLGVIP 180
           VVD YRPIIG+KRDII+SL++I+K R SP RS+KDALKALFGIAL   NR  ++ LG + 
Sbjct: 121 VVDSYRPIIGAKRDIIHSLIEIIKTRNSPLRSVKDALKALFGIALYPLNRYQVIALGGVQ 180

Query: 181 PLFSLVVVGSHAGIVEDASAVVAQVAGCEDSELAFRKVSGLGVLVDLLDSGTGSSQRTKE 240
           PLFSLVV G  AGIVEDASAV+AQ+AGCE+S   F+K  G+GVLVDLLD GTGS  R KE
Sbjct: 181 PLFSLVVNGGRAGIVEDASAVIAQIAGCEESVDEFKKCCGIGVLVDLLDLGTGSGHRVKE 240

Query: 241 NAVSALLNLARWGGERAEEDIKDLGSGILSEIGDVAMNGSEKGKAKAVELLKLIASGDID 300
           NAVSALLNL  +GGERA E++K++   +   I DVA NGS KGK KAV LLK++     D
Sbjct: 241 NAVSALLNLVNFGGERAAEEVKEMAMQVADGIADVAQNGSAKGKTKAVALLKILVD---D 300

Query: 301 GNM 304
           GNM
Sbjct: 301 GNM 300

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BLAST of CmoCh12G000990 vs. NCBI nr
Match: gi|568852280|ref|XP_006479806.1| (PREDICTED: U-box domain-containing protein 4 isoform X3 [Citrus sinensis])

HSP 1 Score: 374.8 bits (961), Expect = 1.5e-100
Identity = 205/303 (67.66%), Postives = 247/303 (81.52%), Query Frame = 1


Query: 1   MEVKRRTASTLVSRLSSVSEQIRCDSLSELRLMTKNDAESRSLIAETGAIPYLAETLYSS 60
           MEVKRRT  +LV++L SVSEQ R ++L+ELRL++K+DAE R +I+E G+IPYLAE LYSS
Sbjct: 1   MEVKRRTVRSLVTKLGSVSEQTRAEALAELRLLSKHDAEIRPMISEAGSIPYLAEILYSS 60

Query: 61  SHAAQEDAAATLLNLSISSREALMSTHGLLDAISHVLGHHNSSSSAAAVQSCAATLHSLL 120
           SHA QE+AAATLLNLSI+SR++LMST GLLDAISHVL HH++S+S+AAVQS AATLHSLL
Sbjct: 61  SHAFQENAAATLLNLSITSRDSLMSTRGLLDAISHVLRHHSTSTSSAAVQSSAATLHSLL 120

Query: 121 VVDEYRPIIGSKRDIIYSLVDILKFRKSPQRSIKDALKALFGIALCQPNRSTMVDLGVIP 180
           VVD YRPIIG+KRDII+SL++I+K R SP RS+KDALKALFGIAL   NR  ++ LG + 
Sbjct: 121 VVDSYRPIIGAKRDIIHSLIEIIKTRNSPLRSVKDALKALFGIALYPLNRYQVIALGGVQ 180

Query: 181 PLFSLVVVGSHAGIVEDASAVVAQVAGCEDSELAFRKVSGLGVLVDLLDSGTGSSQRTKE 240
           PLFSLVV G  AGIVEDASAV+AQ+AGCE+S   F+K  G+GVLVDLLD GTGS  R KE
Sbjct: 181 PLFSLVVNGGRAGIVEDASAVIAQIAGCEESVDEFKKCCGIGVLVDLLDLGTGSGHRVKE 240

Query: 241 NAVSALLNLARWGGERAEEDIKDLGSGILSEIGDVAMNGSEKGKAKAVELLKLIASGDID 300
           NAVSALLNL  +GGERA E++K++   +   I DVA NGS KGK KAV LLK++     D
Sbjct: 241 NAVSALLNLVNFGGERAAEEVKEMAMQVADGIADVAQNGSAKGKTKAVALLKILVD---D 300

Query: 301 GNM 304
           GNM
Sbjct: 301 GNM 300

The following BLAST results are available for this feature:

BLAST of CmoCh12G000990 vs. Swiss-Prot


Match Name	E-value	Identity	Description
SL11_ORYSJ	2.8e-27	34.14	E3 ubiquitin-protein ligase SPL11 OS=Oryza sativa subsp. japonica GN=SPL11 PE=1 ...	[more]
SL11_ORYSI	2.8e-27	34.14	Protein spotted leaf 11 OS=Oryza sativa subsp. indica GN=SPL11 PE=1 SV=2	[more]
PUB11_ARATH	1.1e-26	33.92	U-box domain-containing protein 11 OS=Arabidopsis thaliana GN=PUB11 PE=2 SV=2	[more]
PUB12_ARATH	5.0e-24	33.10	U-box domain-containing protein 12 OS=Arabidopsis thaliana GN=PUB12 PE=2 SV=1	[more]
PUB4_ARATH	1.4e-23	33.33	U-box domain-containing protein 4 OS=Arabidopsis thaliana GN=PUB4 PE=1 SV=3	[more]

BLAST of CmoCh12G000990 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KDY4_CUCSA	4.2e-139	87.99	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G401390 PE=4 SV=1	[more]
A0A067HHC1_CITSI	2.1e-101	67.76	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g021242mg PE=4 SV=1	[more]
V4TV70_9ROSI	2.1e-101	67.76	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10021235mg PE=4 SV=1	[more]
V4U5E9_9ROSI	1.0e-100	67.66	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10021235mg PE=4 SV=1	[more]
B9RG87_RICCO	1.3e-100	67.34	Ubiquitin-protein ligase, putative OS=Ricinus communis GN=RCOM_1452200 PE=4 SV=1	[more]

BLAST of CmoCh12G000990 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G08315.1	7.0e-93	63.61	ARM repeat superfamily protein	[more]
AT1G23030.1	6.0e-28	33.92	ARM repeat superfamily protein	[more]
AT2G28830.1	2.8e-25	33.10	PLANT U-BOX 12	[more]
AT2G23140.1	8.1e-25	33.33	RING/U-box superfamily protein with ARM repeat domain	[more]
AT5G42340.1	4.0e-24	31.27	Plant U-Box 15	[more]

BLAST of CmoCh12G000990 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659089251\|ref\|XP_008445408.1\|	1.1e-140	89.77	PREDICTED: protein spotted leaf 11 [Cucumis melo]	[more]
gi\|449458065\|ref\|XP_004146768.1\|	6.1e-139	87.99	PREDICTED: protein spotted leaf 11 [Cucumis sativus]	[more]
gi\|567903358\|ref\|XP_006444167.1\|	2.9e-101	67.76	hypothetical protein CICLE_v10021235mg [Citrus clementina]	[more]
gi\|567903356\|ref\|XP_006444166.1\|	1.5e-100	67.66	hypothetical protein CICLE_v10021235mg [Citrus clementina]	[more]
gi\|568852280\|ref\|XP_006479806.1\|	1.5e-100	67.66	PREDICTED: U-box domain-containing protein 4 isoform X3 [Citrus sinensis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR000225	Armadillo
IPR011989	ARM-like
IPR016024	ARM-type_fold

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding
GO:0005488	binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015991	ATP hydrolysis coupled proton transport
biological_process	GO:0006119	oxidative phosphorylation
biological_process	GO:0008150	biological_process
cellular_component	GO:0000221	vacuolar proton-transporting V-type ATPase, V1 domain
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0016874	ligase activity
molecular_function	GO:0005515	protein binding
molecular_function	GO:0046961	proton-transporting ATPase activity, rotational mechanism
molecular_function	GO:0005488	binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh12G000990.1	CmoCh12G000990.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000225	Armadillo	SMART	SM00185	arm_5	coord: 166..207 score: 0.39coord: 208..251 score: 0.033coord: 37..77 score:
IPR011989	Armadillo-like helical	GENE3D	G3DSA:1.25.10.10		coord: 8..297 score: 9.5
IPR016024	Armadillo-type fold	unknown	SSF48371	ARM repeat	coord: 8..297 score: 6.84
None	No IPR available	PANTHER	PTHR23315	BETA CATENIN-RELATED ARMADILLO REPEAT-CONTAINING	coord: 1..305 score: 2.9E
None	No IPR available	PANTHER	PTHR23315:SF57	ARMADILLO/BETA-CATENIN-LIKE REPEAT-CONTAINING PROTEIN	coord: 1..305 score: 2.9E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh12G000990	Cucsa.005180	Cucumber (Gy14) v1	cgycmoB0089
CmoCh12G000990	CmaCh12G001220	Cucurbita maxima (Rimu)	cmacmoB176
CmoCh12G000990	Cla022050	Watermelon (97103) v1	cmowmB135
CmoCh12G000990	Csa6G401390	Cucumber (Chinese Long) v2	cmocuB180
CmoCh12G000990	MELO3C011394	Melon (DHL92) v3.5.1	cmomeB147
CmoCh12G000990	ClCG08G010670	Watermelon (Charleston Gray)	cmowcgB162
CmoCh12G000990	CSPI06G20830	Wild cucumber (PI 183967)	cmocpiB184
CmoCh12G000990	Lsi08G009220	Bottle gourd (USVL1VR-Ls)	cmolsiB176
CmoCh12G000990	Cp4.1LG07g00960	Cucurbita pepo (Zucchini)	cmocpeB174
CmoCh12G000990	MELO3C011394.2	Melon (DHL92) v3.6.1	cmomedB162
CmoCh12G000990	CsaV3_6G035860	Cucumber (Chinese Long) v3	cmocucB0214
CmoCh12G000990	Cla97C08G153550	Watermelon (97103) v2	cmowmbB179
CmoCh12G000990	Bhi04G000945	Wax gourd	cmowgoB0194
CmoCh12G000990	CsGy6G020170	Cucumber (Gy14) v2	cgybcmoB704
CmoCh12G000990	Carg20566	Silver-seed gourd	carcmoB0893

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh12G000990	Silver-seed gourd	carcmoB0194
CmoCh12G000990	Wax gourd	cmowgoB0211
CmoCh12G000990	Cucurbita moschata (Rifu)	cmocmoB150
CmoCh12G000990	Cucurbita maxima (Rimu)	cmacmoB765
CmoCh12G000990	Cucurbita pepo (Zucchini)	cmocpeB148