Carg20566 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg20566
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	RING-type E3 ubiquitin transferase
Location	Cucurbita_argyrosperma_scaffold_113 : 363155 .. 364111 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGGTGAAGCGCCGTACGGCTTCCACTTTGGTCTCTCGTCTTAGCTCCGTCTCCGAGCAAATCCGGTGCGAATCCCTGTCGGAGCTCCGATTGATGACGAAGAACGACGCTGAGAGCCGATCGCTTATCGCTGAAACTGGTGCTATTCCTTATTTGGCTGAGACTCTGTATTCCTCCTCTCACGCTGCCCAAGAAGACGCCGCTGCTACGCTTCTGAATCTCTCAATTTCCTCCCGTGAAGCTTTGATGTCCACACATGGCCTCCTCGACGCGATTTCTCATGTGCTTGGCCATCATAATTCCTCTTCTTCTGCCGCCGCCGTCCAGTCCTGTGCTGCGACTCTTCATAGTCTTCTCGTTGTGGATGAGTACCGCCCGATTATTGGTTCAAAGCGTGATATAATATATTCGCTTGTTGATATTCTCAAATTTAGGAAATCTCCTCAGAGATCGATTAAGGATGCTCTGAAAGCGTTGTTTGGGATTGCGCTGTGTCAGCCGAATCGGTCCACTATGGTCGATCTCGGAGTGATTCCTCCGTTATTCTCTTTGGTTGTGGTCGGCAGTCACGCCGGGATTGTCGAGGATGCGTCGGCGGTGGTCGCGCAGGTAGCGGGATGTGAAGATAGCGAATTAGCATTTCGTAAGGTTTCCGGATTGGGAGTTTTGGTGGATTTGTTGGATTCAGGGACTGGTTCAAGTCAGAGGACAAAGGAGAACGCGGTATCGGCGTTGTTGAATTTAGCGAGGTGGGGAGGAGAGAGGGCGGAGGAGGACATCAAGGATTTGGGATCTGGAATCTTGAGTGAAATTGGAGATGTGGCCATGAACGGCAGTGAGAAGGGGAAAGCCAAGGCGGTGGAATTGTTGAAGCTAATTGCAAGCGGCGACATCGACGGTAACGTATTCGAGGATTTGCAGTTGGATCGTTTGATAAATTCATGCTCTGAATAG

mRNA sequence

ATGGAGGTGAAGCGCCGTACGGCTTCCACTTTGGTCTCTCGTCTTAGCTCCGTCTCCGAGCAAATCCGGTGCGAATCCCTGTCGGAGCTCCGATTGATGACGAAGAACGACGCTGAGAGCCGATCGCTTATCGCTGAAACTGGTGCTATTCCTTATTTGGCTGAGACTCTGTATTCCTCCTCTCACGCTGCCCAAGAAGACGCCGCTGCTACGCTTCTGAATCTCTCAATTTCCTCCCGTGAAGCTTTGATGTCCACACATGGCCTCCTCGACGCGATTTCTCATGTGCTTGGCCATCATAATTCCTCTTCTTCTGCCGCCGCCGTCCAGTCCTGTGCTGCGACTCTTCATAGTCTTCTCGTTGTGGATGAGTACCGCCCGATTATTGGTTCAAAGCGTGATATAATATATTCGCTTGTTGATATTCTCAAATTTAGGAAATCTCCTCAGAGATCGATTAAGGATGCTCTGAAAGCGTTGTTTGGGATTGCGCTGTGTCAGCCGAATCGGTCCACTATGGTCGATCTCGGAGTGATTCCTCCGTTATTCTCTTTGGTTGTGGTCGGCAGTCACGCCGGGATTGTCGAGGATGCGTCGGCGGTGGTCGCGCAGGTAGCGGGATGTGAAGATAGCGAATTAGCATTTCGTAAGGTTTCCGGATTGGGAGTTTTGGTGGATTTGTTGGATTCAGGGACTGGTTCAAGTCAGAGGACAAAGGAGAACGCGGTATCGGCGTTGTTGAATTTAGCGAGGTGGGGAGGAGAGAGGGCGGAGGAGGACATCAAGGATTTGGGATCTGGAATCTTGAGTGAAATTGGAGATGTGGCCATGAACGGCAGTGAGAAGGGGAAAGCCAAGGCGGTGGAATTGTTGAAGCTAATTGCAAGCGGCGACATCGACGGTAACGTATTCGAGGATTTGCAGTTGGATCGTTTGATAAATTCATGCTCTGAATAG

Coding sequence (CDS)

ATGGAGGTGAAGCGCCGTACGGCTTCCACTTTGGTCTCTCGTCTTAGCTCCGTCTCCGAGCAAATCCGGTGCGAATCCCTGTCGGAGCTCCGATTGATGACGAAGAACGACGCTGAGAGCCGATCGCTTATCGCTGAAACTGGTGCTATTCCTTATTTGGCTGAGACTCTGTATTCCTCCTCTCACGCTGCCCAAGAAGACGCCGCTGCTACGCTTCTGAATCTCTCAATTTCCTCCCGTGAAGCTTTGATGTCCACACATGGCCTCCTCGACGCGATTTCTCATGTGCTTGGCCATCATAATTCCTCTTCTTCTGCCGCCGCCGTCCAGTCCTGTGCTGCGACTCTTCATAGTCTTCTCGTTGTGGATGAGTACCGCCCGATTATTGGTTCAAAGCGTGATATAATATATTCGCTTGTTGATATTCTCAAATTTAGGAAATCTCCTCAGAGATCGATTAAGGATGCTCTGAAAGCGTTGTTTGGGATTGCGCTGTGTCAGCCGAATCGGTCCACTATGGTCGATCTCGGAGTGATTCCTCCGTTATTCTCTTTGGTTGTGGTCGGCAGTCACGCCGGGATTGTCGAGGATGCGTCGGCGGTGGTCGCGCAGGTAGCGGGATGTGAAGATAGCGAATTAGCATTTCGTAAGGTTTCCGGATTGGGAGTTTTGGTGGATTTGTTGGATTCAGGGACTGGTTCAAGTCAGAGGACAAAGGAGAACGCGGTATCGGCGTTGTTGAATTTAGCGAGGTGGGGAGGAGAGAGGGCGGAGGAGGACATCAAGGATTTGGGATCTGGAATCTTGAGTGAAATTGGAGATGTGGCCATGAACGGCAGTGAGAAGGGGAAAGCCAAGGCGGTGGAATTGTTGAAGCTAATTGCAAGCGGCGACATCGACGGTAACGTATTCGAGGATTTGCAGTTGGATCGTTTGATAAATTCATGCTCTGAATAG

Protein sequence

MEVKRRTASTLVSRLSSVSEQIRCESLSELRLMTKNDAESRSLIAETGAIPYLAETLYSSSHAAQEDAAATLLNLSISSREALMSTHGLLDAISHVLGHHNSSSSAAAVQSCAATLHSLLVVDEYRPIIGSKRDIIYSLVDILKFRKSPQRSIKDALKALFGIALCQPNRSTMVDLGVIPPLFSLVVVGSHAGIVEDASAVVAQVAGCEDSELAFRKVSGLGVLVDLLDSGTGSSQRTKENAVSALLNLARWGGERAEEDIKDLGSGILSEIGDVAMNGSEKGKAKAVELLKLIASGDIDGNVFEDLQLDRLINSCSE

Homology

[Close]

BLAST of Carg20566 vs. NCBI nr
Match: XP_023538067.1 (protein spotted leaf 11 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 560.8 bits (1444), Expect = 2.9e-156
Identity = 317/318 (99.69%), Postives = 318/318 (100.00%), Query Frame = 0


Query: 1   MEVKRRTASTLVSRLSSVSEQIRCESLSELRLMTKNDAESRSLIAETGAIPYLAETLYSS 60
           MEVKRRTASTLVSRLSSVSEQIRCESLSELRLMTKNDAESRSLIAETGAIPYLAETLYSS
Sbjct: 1   MEVKRRTASTLVSRLSSVSEQIRCESLSELRLMTKNDAESRSLIAETGAIPYLAETLYSS 60

Query: 61  SHAAQEDAAATLLNLSISSREALMSTHGLLDAISHVLGHXXXXXXXXXXXXXAATLHSLL 120
           SHAAQEDAAATLLNLSISSREALMSTHGLLDAISHVLGHXXXXXXXXXXXXXAATLHSLL
Sbjct: 61  SHAAQEDAAATLLNLSISSREALMSTHGLLDAISHVLGHXXXXXXXXXXXXXAATLHSLL 120

Query: 121 VVDEYRPIIGSKRDIIYSLVDILKFRKSPQRSIKDALKALFGIALCQPNRSTMVDLGVIP 180
           VVDEYRP+IGSKRDIIYSLVDILKFRKSPQRSIKDALKALFGIALCQPNRSTMVDLGVIP
Sbjct: 121 VVDEYRPVIGSKRDIIYSLVDILKFRKSPQRSIKDALKALFGIALCQPNRSTMVDLGVIP 180

Query: 181 PLFSLVVVGSHAGIVEDASAVVAQVAGCEDSELAFRKVSGLGVLVDLLDSGTGSSQRTKE 240
           PLFSLVVVGSHAGIVEDASAVVAQVAGCEDSELAFRKVSGLGVLVDLLDSGTGSSQRTKE
Sbjct: 181 PLFSLVVVGSHAGIVEDASAVVAQVAGCEDSELAFRKVSGLGVLVDLLDSGTGSSQRTKE 240

Query: 241 NAVSALLNLARWGGERAEEDIKDLGSGILSEIGDVAMNGSEKGKAKAVELLKLIASGDID 300
           NAVSALLNLARWGGERAEEDIKDLGSGILSEIGDVAMNGSEKGKAKAVELLKLIASGDID
Sbjct: 241 NAVSALLNLARWGGERAEEDIKDLGSGILSEIGDVAMNGSEKGKAKAVELLKLIASGDID 300

Query: 301 GNVFEDLQLDRLINSCSE 319
           GNVFEDLQLDRLINSCSE
Sbjct: 301 GNVFEDLQLDRLINSCSE 318

[Close]

BLAST of Carg20566 vs. NCBI nr
Match: XP_022951384.1 (protein spotted leaf 11 [Cucurbita moschata])

HSP 1 Score: 560.1 bits (1442), Expect = 4.9e-156
Identity = 317/318 (99.69%), Postives = 318/318 (100.00%), Query Frame = 0


Query: 1   MEVKRRTASTLVSRLSSVSEQIRCESLSELRLMTKNDAESRSLIAETGAIPYLAETLYSS 60
           MEVKRRTASTLVSRLSSVSEQIRC+SLSELRLMTKNDAESRSLIAETGAIPYLAETLYSS
Sbjct: 1   MEVKRRTASTLVSRLSSVSEQIRCDSLSELRLMTKNDAESRSLIAETGAIPYLAETLYSS 60

Query: 61  SHAAQEDAAATLLNLSISSREALMSTHGLLDAISHVLGHXXXXXXXXXXXXXAATLHSLL 120
           SHAAQEDAAATLLNLSISSREALMSTHGLLDAISHVLGHXXXXXXXXXXXXXAATLHSLL
Sbjct: 61  SHAAQEDAAATLLNLSISSREALMSTHGLLDAISHVLGHXXXXXXXXXXXXXAATLHSLL 120

Query: 121 VVDEYRPIIGSKRDIIYSLVDILKFRKSPQRSIKDALKALFGIALCQPNRSTMVDLGVIP 180
           VVDEYRPIIGSKRDIIYSLVDILKFRKSPQRSIKDALKALFGIALCQPNRSTMVDLGVIP
Sbjct: 121 VVDEYRPIIGSKRDIIYSLVDILKFRKSPQRSIKDALKALFGIALCQPNRSTMVDLGVIP 180

Query: 181 PLFSLVVVGSHAGIVEDASAVVAQVAGCEDSELAFRKVSGLGVLVDLLDSGTGSSQRTKE 240
           PLFSLVVVGSHAGIVEDASAVVAQVAGCEDSELAFRKVSGLGVLVDLLDSGTGSSQRTKE
Sbjct: 181 PLFSLVVVGSHAGIVEDASAVVAQVAGCEDSELAFRKVSGLGVLVDLLDSGTGSSQRTKE 240

Query: 241 NAVSALLNLARWGGERAEEDIKDLGSGILSEIGDVAMNGSEKGKAKAVELLKLIASGDID 300
           NAVSALLNLARWGGERAEEDIKDLGSGILSEIGDVAMNGSEKGKAKAVELLKLIASGDID
Sbjct: 241 NAVSALLNLARWGGERAEEDIKDLGSGILSEIGDVAMNGSEKGKAKAVELLKLIASGDID 300

Query: 301 GNVFEDLQLDRLINSCSE 319
           GNVFEDLQLDRLINSCSE
Sbjct: 301 GNVFEDLQLDRLINSCSE 318

[Close]

BLAST of Carg20566 vs. NCBI nr
Match: XP_023002054.1 (protein spotted leaf 11 [Cucurbita maxima])

HSP 1 Score: 544.7 bits (1402), Expect = 2.1e-151
Identity = 310/318 (97.48%), Postives = 313/318 (98.43%), Query Frame = 0


Query: 1   MEVKRRTASTLVSRLSSVSEQIRCESLSELRLMTKNDAESRSLIAETGAIPYLAETLYSS 60
           MEVK RTASTLVSRLSSVSEQIRC+SLSELRLMTKNDAESRSLIAETGAIPYLAETLYSS
Sbjct: 78  MEVKLRTASTLVSRLSSVSEQIRCDSLSELRLMTKNDAESRSLIAETGAIPYLAETLYSS 137

Query: 61  SHAAQEDAAATLLNLSISSREALMSTHGLLDAISHVLGHXXXXXXXXXXXXXAATLHSLL 120
           SHAAQEDAAATLLNLSISSREALMSTHGLLDAISHVLGHXXXXXXXXXXXXX   LHSLL
Sbjct: 138 SHAAQEDAAATLLNLSISSREALMSTHGLLDAISHVLGHXXXXXXXXXXXXXXXXLHSLL 197

Query: 121 VVDEYRPIIGSKRDIIYSLVDILKFRKSPQRSIKDALKALFGIALCQPNRSTMVDLGVIP 180
           VVD+YRPIIGSKRDIIYSLVDILKFRKSPQRSIKDALKALFGIAL QPNRSTMVDLGVIP
Sbjct: 198 VVDDYRPIIGSKRDIIYSLVDILKFRKSPQRSIKDALKALFGIALYQPNRSTMVDLGVIP 257

Query: 181 PLFSLVVVGSHAGIVEDASAVVAQVAGCEDSELAFRKVSGLGVLVDLLDSGTGSSQRTKE 240
           PLFSLVVVGSHAGIVEDASAVVAQVAGCEDSELAFR+VSGLGVLVDLLDSGTGSSQRTKE
Sbjct: 258 PLFSLVVVGSHAGIVEDASAVVAQVAGCEDSELAFRRVSGLGVLVDLLDSGTGSSQRTKE 317

Query: 241 NAVSALLNLARWGGERAEEDIKDLGSGILSEIGDVAMNGSEKGKAKAVELLKLIASGDID 300
           NAVSALLNLARWGGERAEEDIKDLGSGILSEIGDVAMNGSEKGKAKAVELLKLIASGDID
Sbjct: 318 NAVSALLNLARWGGERAEEDIKDLGSGILSEIGDVAMNGSEKGKAKAVELLKLIASGDID 377

Query: 301 GNVFEDLQLDRLINSCSE 319
           GNVFEDLQLDRLINSCSE
Sbjct: 378 GNVFEDLQLDRLINSCSE 395

[Close]

BLAST of Carg20566 vs. NCBI nr
Match: XP_008445408.1 (PREDICTED: protein spotted leaf 11 [Cucumis melo])

HSP 1 Score: 510.4 bits (1313), Expect = 4.5e-141
Identity = 275/318 (86.48%), Postives = 288/318 (90.57%), Query Frame = 0


Query: 1   MEVKRRTASTLVSRLSSVSEQIRCESLSELRLMTKNDAESRSLIAETGAIPYLAETLYSS 60
           MEVKRRT STLVSRLSSVSEQ RCESLSELRLMTKND ESRSLI E GA+PYL+ETLYSS
Sbjct: 1   MEVKRRTVSTLVSRLSSVSEQTRCESLSELRLMTKNDVESRSLIVEAGALPYLSETLYSS 60

Query: 61  SHAAQEDAAATLLNLSISSREALMSTHGLLDAISHVLGHXXXXXXXXXXXXXAATLHSLL 120
           SH AQEDAAATLLNLSISSR+ALMSTHGLLDAISHVL H              ATLHSLL
Sbjct: 61  SHVAQEDAAATLLNLSISSRQALMSTHGLLDAISHVLSHHNSSSSASAVQSCGATLHSLL 120

Query: 121 VVDEYRPIIGSKRDIIYSLVDILKFRKSPQRSIKDALKALFGIALCQPNRSTMVDLGVIP 180
           VVDEYRPIIGSKRDIIYSLVDILK+RKSPQRSIKDALKALFGIAL Q NRSTMVDLGVIP
Sbjct: 121 VVDEYRPIIGSKRDIIYSLVDILKYRKSPQRSIKDALKALFGIALHQSNRSTMVDLGVIP 180

Query: 181 PLFSLVVVGSHAGIVEDASAVVAQVAGCEDSELAFRKVSGLGVLVDLLDSGTGSSQRTKE 240
           PLFSLVVVG HAGIVEDASAVVAQVAGCE+SELAFR+VSGLGVLVDLLDSGTGSS RTKE
Sbjct: 181 PLFSLVVVGGHAGIVEDASAVVAQVAGCEESELAFRRVSGLGVLVDLLDSGTGSSLRTKE 240

Query: 241 NAVSALLNLARWGGERAEEDIKDLGSGILSEIGDVAMNGSEKGKAKAVELLKLIASGDID 300
           NAVSALLNLA+WGG+RA ED+KDLGSGILSEI DVA+NGSEKGK KAVELLK++ASG ID
Sbjct: 241 NAVSALLNLAKWGGDRAAEDVKDLGSGILSEIADVAVNGSEKGKTKAVELLKMVASGGID 300

Query: 301 GNVFEDLQLDRLINSCSE 319
           GNVFEDLQL+RLIN CSE
Sbjct: 301 GNVFEDLQLNRLINPCSE 318

[Close]

BLAST of Carg20566 vs. NCBI nr
Match: XP_004146768.1 (PREDICTED: protein spotted leaf 11 [Cucumis sativus] >KGN47768.1 hypothetical protein Csa_6G401390 [Cucumis sativus])

HSP 1 Score: 503.1 bits (1294), Expect = 7.1e-139
Identity = 285/318 (89.62%), Postives = 299/318 (94.03%), Query Frame = 0


Query: 1   MEVKRRTASTLVSRLSSVSEQIRCESLSELRLMTKNDAESRSLIAETGAIPYLAETLYSS 60
           MEVK R  STLVSRLSSVSEQIRCESLSELRLMTKNDA+SRSLI   GA+PYL+ETLYSS
Sbjct: 1   MEVKGRAVSTLVSRLSSVSEQIRCESLSELRLMTKNDAQSRSLIVHAGALPYLSETLYSS 60

Query: 61  SHAAQEDAAATLLNLSISSREALMSTHGLLDAISHVLGHXXXXXXXXXXXXXAATLHSLL 120
           SH  QEDAAATLLNLSISSREALMSTHGLLDAISHVL HXXXXXXXXXXXXXAATLHSLL
Sbjct: 61  SHLPQEDAAATLLNLSISSREALMSTHGLLDAISHVLSHXXXXXXXXXXXXXAATLHSLL 120

Query: 121 VVDEYRPIIGSKRDIIYSLVDILKFRKSPQRSIKDALKALFGIALCQPNRSTMVDLGVIP 180
           VVDEYRPIIGSKRDIIYSLVDILK+RKSPQRSIKDALKALFGIAL Q NRSTMVDLGVIP
Sbjct: 121 VVDEYRPIIGSKRDIIYSLVDILKYRKSPQRSIKDALKALFGIALHQSNRSTMVDLGVIP 180

Query: 181 PLFSLVVVGSHAGIVEDASAVVAQVAGCEDSELAFRKVSGLGVLVDLLDSGTGSSQRTKE 240
           PLFSLVVVG HAGIVEDASAVVAQVAGCE+SELAFR+VSGLGVLVDLLDSGTGSS RTKE
Sbjct: 181 PLFSLVVVGGHAGIVEDASAVVAQVAGCEESELAFRRVSGLGVLVDLLDSGTGSSLRTKE 240

Query: 241 NAVSALLNLARWGGERAEEDIKDLGSGILSEIGDVAMNGSEKGKAKAVELLKLIASGDID 300
           NAVSALLNLA+WGG+RA ED+KDLGSGILSEI DVA+NGSEKGK KAVELLK++ASG ID
Sbjct: 241 NAVSALLNLAKWGGDRAAEDVKDLGSGILSEIADVAVNGSEKGKTKAVELLKMVASGGID 300

Query: 301 GNVFEDLQLDRLINSCSE 319
           G VF+DLQL+RLIN CSE
Sbjct: 301 GKVFDDLQLNRLINPCSE 318

[Close]

BLAST of Carg20566 vs. TAIR10
Match: AT1G08315.1 (ARM repeat superfamily protein)

HSP 1 Score: 323.6 bits (828), Expect = 1.4e-88
Identity = 191/317 (60.25%), Postives = 229/317 (72.24%), Query Frame = 0


Query: 4   KRRTASTLVSRLSSVSEQIRCESLSELRLMTKNDAESRSLIAETGAIPYLAETLYSSSHA 63
           KRRT ST+VSRLSSVSEQ R  +L+ELRL++K D +SR +IA+ GAIPYLAETLYSSSH+
Sbjct: 5   KRRTMSTIVSRLSSVSEQTRAAALAELRLISKQDPDSRLIIADAGAIPYLAETLYSSSHS 64

Query: 64  AQEDAAATLLNLSISSREALMSTHGLLDAISHVLGHXXXXXXXXXXXXXAATLHSLLVVD 123
           +QE+AAATLLNLSI+SRE LMS+ GLLDA+SH L H             AAT++SLL+ +
Sbjct: 65  SQENAAATLLNLSITSREPLMSSRGLLDALSHALRHHDTTTSPAAVQSSAATIYSLLIAE 124

Query: 124 E-YRPIIGSKRDIIYSLVDILKFRKSPQRSIKDALKALFGIALCQPNRSTMVDLGVIPPL 183
           E YRPIIGSKRDII+SL+ I+++  S  RSIKD+LKALF IAL   NRSTM+ LG IP L
Sbjct: 125 ESYRPIIGSKRDIIFSLIHIIRYPDSHPRSIKDSLKALFAIALYPMNRSTMISLGAIPAL 184

Query: 184 FSLVVVGSHAGIVEDASAVVAQVAGCEDSELAFRKVSGLGVLVDLLDSGTGSSQRTKENA 243
           FSL+V  S  GIVEDA+AV+AQVAGCEDSE   R+VSG  VL DLLD  TGSS R KEN+
Sbjct: 185 FSLIVKDSRCGIVEDATAVMAQVAGCEDSEDGMRRVSGANVLADLLDPCTGSSLRIKENS 244

Query: 244 VSALLNLARWGGERAEEDI-----KDLGSGILSEIGDVAMNGSEKGKAKAVELLKLIASG 303
           V ALLNLAR GG  A  ++          G +  I  VA NGS KG+ KAV+LLKL+ SG
Sbjct: 245 VGALLNLARCGGAAARSEVAAAVASGADEGAMEGIVYVAENGSLKGRKKAVDLLKLVVSG 304

Query: 304 DIDGNVFEDLQLDRLIN 315
           +  G    D + D L N
Sbjct: 305 NGGG----DSRFDYLFN 317

[Close]

BLAST of Carg20566 vs. TAIR10
Match: AT5G01830.1 (ARM repeat superfamily protein)

HSP 1 Score: 81.6 bits (200), Expect = 9.3e-16
Identity = 90/313 (28.75%), Postives = 143/313 (45.69%), Query Frame = 0


Query: 1   MEVKRRTASTLVSRLSSVSEQIRCESLSELRLMTKNDAESRSLIAETGAIPYLAETLYSS 60
           +E  +   S L+ +LS          + ELR + K+D  +R+ IAE GAIP L   L + 
Sbjct: 365 VEFTKMMVSFLIEKLSVADSN---GVVFELRALAKSDTVARACIAEAGAIPKLVRYLATE 424

Query: 61  SHAAQEDAAATLLNLSI--SSREALMSTHGLLDAISHVLGHXXXXXXXXXXXXXAATLHS 120
             + Q +A  T+LNLSI   ++  +M T G L+ +  VL               AATL S
Sbjct: 425 CPSLQINAVTTILNLSILEQNKTRIMETDGALNGVIEVL---RSGATWEAKANAAATLFS 484

Query: 121 LLVVDEYRPIIGSKRDIIYSLVDILKFRKSPQRSIKDALKALFGIALCQPNRSTMVDLGV 180
           L  V  YR  +G K  ++  LVD+ K  + P  S +DAL A+  +   + N    V+ GV
Sbjct: 485 LAGVSAYRRRLGRKARVVSGLVDLAK--QGPTSSKRDALVAILNLVAERENVGRFVEAGV 544

Query: 181 IPPLFSLVVVGSHAGIVEDASAVVAQV---AGCEDSELAFRKVSGLGVLVDLLDSGTGSS 240
           +          +   + E+A AVV  V    G      AF  +  LG   +++  G   +
Sbjct: 545 MG-----AAGDAFQELPEEAVAVVEAVVRRGGLMAVSAAFSLIRLLG---EVMREG---A 604

Query: 241 QRTKENAVSALLNLARWGGERAEEDIKDLGSGILSEIGDVAMNGSEKGKAKAVELLKLI- 300
             T+E+A + L+ + R GG     ++  +  GI   I ++   G+ +G  KA  L++ + 
Sbjct: 605 DTTRESAAATLVTMCRKGGSELVAEMAAI-PGIERVIWEMIGAGTARGGRKAASLMRYLR 657

Query: 301 --ASGDIDGNVFE 306
             A+GD      E
Sbjct: 665 RWAAGDTHNTAAE 657

[Close]

BLAST of Carg20566 vs. TAIR10
Match: AT1G10560.1 (plant U-box 18)

HSP 1 Score: 79.7 bits (195), Expect = 3.5e-15
Identity = 80/313 (25.56%), Postives = 142/313 (45.37%), Query Frame = 0


Query: 8   ASTLVSRLSSVSEQIRCESLSELRLMTKNDAESRSLIAETGAIPYLAETLYSSSHAAQED 67
           A  L S L +  E++   ++ E+R+ TK  + +RS + + GA+  L + L S     QE+
Sbjct: 390 AKFLTSELINGGEEMIYRAVREIRVQTKTSSFNRSCLVKAGAVTPLLKLLSSVDIRIQEN 449

Query: 68  AAATLLNLS--ISSREALMSTHGLLDAISHVLGHXXXXXXXXXXXXXAATLHSLLVVDEY 127
           A A +LNLS  ++ +  +       + +  ++               A+ L  L  V++Y
Sbjct: 450 AMAGILNLSKHVTGKSKIAG-----EGLKILVEILNEGAKTETRLYSASALFYLSSVEDY 509

Query: 128 RPIIGSKRDIIYSLVDILKFRKSPQRSIKDALKALFGIALCQPNRSTMVDLGVIPPLFSL 187
             +IG   D I  L++I+K       + + AL A+ G+ +   N   ++  G +P L  L
Sbjct: 510 SRLIGENPDAIPGLMNIVKGDDYGDSAKRSALLAVMGLLMQSDNHWRVLAAGAVPILLDL 569

Query: 188 VVVGS-HAGIVEDASAVVAQVAGCEDSELAFRKVSGLGVLVDLLDSGTGSSQRTKENAVS 247
           +  G    G+  D  A +A++A   D  +   +  GL + V +L S   S    K++ V 
Sbjct: 570 LRSGEISGGLTADCLATLAKLAEYPDGTIGVIRRGGLKLAVKILSSSEDSPVAVKQHCVG 629

Query: 248 ALLNLARWGGERAEEDIKDLGSGILSEIGDVAMNGSEKGKAKAVELLKLIASGD--IDGN 307
            +LNL   GG R    +    S ++  +  V  NG   G  KA  L+++I        G+
Sbjct: 630 LILNLCLNGG-RDVVGVLVKNSLVMGSLYTVLSNGEYGGSKKASALIRMIHEFQERKTGS 689

Query: 308 VFEDLQLDRLINS 316
           V  +LQ  R +++
Sbjct: 690 VEPNLQRGRFVHA 696

[Close]

BLAST of Carg20566 vs. TAIR10
Match: AT1G29340.1 (plant U-box 17)

HSP 1 Score: 70.1 bits (170), Expect = 2.8e-12
Identity = 83/296 (28.04%), Postives = 133/296 (44.93%), Query Frame = 0


Query: 1   MEVKRRTASTLVSRLSSVSEQIRCESLSELRLMTKNDAESRSLIAETGAIPYLAETLYSS 60
           +E  + T S L+  L+  S+  +  +  E+RL+ K   E+R+ IAE GAIP+L   L S 
Sbjct: 401 VEANKATVSILIKYLADGSQAAQTVAAREIRLLAKTGKENRAYIAEAGAIPHLCRLLTSE 460

Query: 61  SHAAQEDAAATLLNLSI--SSREALMSTHGLLDAISHVLGHXXXXXXXXXXXXXAATLHS 120
           +  AQE++   +LNLSI   ++  +M     L++I  VL         XXXXXX      
Sbjct: 461 NAIAQENSVTAMLNLSIYEKNKSRIMEEGDCLESIVSVL-----VSGLXXXXXXXXXXXX 520

Query: 121 LLVVDEYRPIIGSKRDIIYSLVDILKFRKSPQRSIKDALKALFGIALCQPNRSTMVDLGV 180
                                           R  KDA+ AL+ ++    N S M++ G 
Sbjct: 521 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPRGKKDAVTALYNLSTHPDNCSRMIEGGG 580

Query: 181 IPPLFSLVVVGSHAGIVEDASAVVA-QVAGCEDSELAFRKVSGLGVLVDLLDSGTGSSQR 240
           +    SLV    + G+ E+A+  +A  V     +E   ++ S +  L+ ++  GT    R
Sbjct: 581 VS---SLVGALKNEGVAEEAAGALALLVRQSLGAEAIGKEDSAVAGLMGMMRCGT---PR 640

Query: 241 TKENAVSALLNLARWGGERAEEDIKDLGSGILSEIGDVAMNGSEKGKAKAVELLKL 294
            KENAV+ALL L R GG    E +      I   +  +   G+++ + KA  L ++
Sbjct: 641 GKENAVAALLELCRSGGAAVAEKVL-RAPAIAGLLQTLLFTGTKRARRKAASLARV 684

[Close]

BLAST of Carg20566 vs. TAIR10
Match: AT4G21350.1 (plant U-box 8)

HSP 1 Score: 67.8 bits (164), Expect = 1.4e-11
Identity = 69/225 (30.67%), Postives = 112/225 (49.78%), Query Frame = 0


Query: 9   STLVSRLSSVSEQIRCESLSELRLMTKNDAESRSLIAETGAIPYLAETLYSSSHAAQEDA 68
           STLVS+ SS + ++  ESL+ L  +TK D+  R  + E+GA+    + + S +   QE +
Sbjct: 99  STLVSQSSSNASKL--ESLTRLVRLTKRDSSIRRKVTESGAVRAALDCVDSCNQVLQEKS 158

Query: 69  AATLLNLSISSREAL-MSTHGLLDAISHVLGHXXXXXXXXXXXXXAATLHSLLVVDEYRP 128
            + LLNLS+     + +   G++  I  VL               A  L SL VV+  + 
Sbjct: 159 LSLLLNLSLEDDNKVGLVADGVIRRIVTVL----RVGSPDCKAIAATLLTSLAVVEVNKA 218

Query: 129 IIGSKRDIIYSLVDILKFRKSPQRSIKDALKALFGIALCQPNRSTMVDLGVIPPLFSLVV 188
            IGS  D I +LV +L+     +R  K++  AL+ +     NR  +VD G +P    ++V
Sbjct: 219 TIGSYPDAISALVSLLRVGNDRER--KESATALYALCSFPDNRKRVVDCGSVP----ILV 278

Query: 189 VGSHAGIVEDASAVVAQVAGCEDSELAFRKVSG-LGVLVDLLDSG 232
             + +G+ E A  V+  +  C        KVSG + VLV++L +G
Sbjct: 279 EAADSGL-ERAVEVLGLLVKCRGGREEMSKVSGFVEVLVNVLRNG 310

[Close]

BLAST of Carg20566 vs. Swiss-Prot
Match: sp|Q9LZW3|PUB16_ARATH (U-box domain-containing protein 16 OS=Arabidopsis thaliana OX=3702 GN=PUB16 PE=2 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 1.7e-14
Identity = 90/313 (28.75%), Postives = 143/313 (45.69%), Query Frame = 0


Query: 1   MEVKRRTASTLVSRLSSVSEQIRCESLSELRLMTKNDAESRSLIAETGAIPYLAETLYSS 60
           +E  +   S L+ +LS          + ELR + K+D  +R+ IAE GAIP L   L + 
Sbjct: 365 VEFTKMMVSFLIEKLSVADSN---GVVFELRALAKSDTVARACIAEAGAIPKLVRYLATE 424

Query: 61  SHAAQEDAAATLLNLSI--SSREALMSTHGLLDAISHVLGHXXXXXXXXXXXXXAATLHS 120
             + Q +A  T+LNLSI   ++  +M T G L+ +  VL               AATL S
Sbjct: 425 CPSLQINAVTTILNLSILEQNKTRIMETDGALNGVIEVL---RSGATWEAKANAAATLFS 484

Query: 121 LLVVDEYRPIIGSKRDIIYSLVDILKFRKSPQRSIKDALKALFGIALCQPNRSTMVDLGV 180
           L  V  YR  +G K  ++  LVD+ K  + P  S +DAL A+  +   + N    V+ GV
Sbjct: 485 LAGVSAYRRRLGRKARVVSGLVDLAK--QGPTSSKRDALVAILNLVAERENVGRFVEAGV 544

Query: 181 IPPLFSLVVVGSHAGIVEDASAVVAQV---AGCEDSELAFRKVSGLGVLVDLLDSGTGSS 240
           +          +   + E+A AVV  V    G      AF  +  LG   +++  G   +
Sbjct: 545 MG-----AAGDAFQELPEEAVAVVEAVVRRGGLMAVSAAFSLIRLLG---EVMREG---A 604

Query: 241 QRTKENAVSALLNLARWGGERAEEDIKDLGSGILSEIGDVAMNGSEKGKAKAVELLKLI- 300
             T+E+A + L+ + R GG     ++  +  GI   I ++   G+ +G  KA  L++ + 
Sbjct: 605 DTTRESAAATLVTMCRKGGSELVAEMAAI-PGIERVIWEMIGAGTARGGRKAASLMRYLR 657

Query: 301 --ASGDIDGNVFE 306
             A+GD      E
Sbjct: 665 RWAAGDTHNTAAE 657

[Close]

BLAST of Carg20566 vs. Swiss-Prot
Match: sp|Q9XIJ5|PUB18_ARATH (U-box domain-containing protein 18 OS=Arabidopsis thaliana OX=3702 GN=PUB18 PE=1 SV=1)

HSP 1 Score: 79.7 bits (195), Expect = 6.4e-14
Identity = 80/313 (25.56%), Postives = 142/313 (45.37%), Query Frame = 0


Query: 8   ASTLVSRLSSVSEQIRCESLSELRLMTKNDAESRSLIAETGAIPYLAETLYSSSHAAQED 67
           A  L S L +  E++   ++ E+R+ TK  + +RS + + GA+  L + L S     QE+
Sbjct: 390 AKFLTSELINGGEEMIYRAVREIRVQTKTSSFNRSCLVKAGAVTPLLKLLSSVDIRIQEN 449

Query: 68  AAATLLNLS--ISSREALMSTHGLLDAISHVLGHXXXXXXXXXXXXXAATLHSLLVVDEY 127
           A A +LNLS  ++ +  +       + +  ++               A+ L  L  V++Y
Sbjct: 450 AMAGILNLSKHVTGKSKIAG-----EGLKILVEILNEGAKTETRLYSASALFYLSSVEDY 509

Query: 128 RPIIGSKRDIIYSLVDILKFRKSPQRSIKDALKALFGIALCQPNRSTMVDLGVIPPLFSL 187
             +IG   D I  L++I+K       + + AL A+ G+ +   N   ++  G +P L  L
Sbjct: 510 SRLIGENPDAIPGLMNIVKGDDYGDSAKRSALLAVMGLLMQSDNHWRVLAAGAVPILLDL 569

Query: 188 VVVGS-HAGIVEDASAVVAQVAGCEDSELAFRKVSGLGVLVDLLDSGTGSSQRTKENAVS 247
           +  G    G+  D  A +A++A   D  +   +  GL + V +L S   S    K++ V 
Sbjct: 570 LRSGEISGGLTADCLATLAKLAEYPDGTIGVIRRGGLKLAVKILSSSEDSPVAVKQHCVG 629

Query: 248 ALLNLARWGGERAEEDIKDLGSGILSEIGDVAMNGSEKGKAKAVELLKLIASGD--IDGN 307
            +LNL   GG R    +    S ++  +  V  NG   G  KA  L+++I        G+
Sbjct: 630 LILNLCLNGG-RDVVGVLVKNSLVMGSLYTVLSNGEYGGSKKASALIRMIHEFQERKTGS 689

Query: 308 VFEDLQLDRLINS 316
           V  +LQ  R +++
Sbjct: 690 VEPNLQRGRFVHA 696

[Close]

BLAST of Carg20566 vs. Swiss-Prot
Match: sp|Q9C7R6|PUB17_ARATH (U-box domain-containing protein 17 OS=Arabidopsis thaliana OX=3702 GN=PUB17 PE=2 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 5.1e-11
Identity = 83/296 (28.04%), Postives = 133/296 (44.93%), Query Frame = 0


Query: 1   MEVKRRTASTLVSRLSSVSEQIRCESLSELRLMTKNDAESRSLIAETGAIPYLAETLYSS 60
           +E  + T S L+  L+  S+  +  +  E+RL+ K   E+R+ IAE GAIP+L   L S 
Sbjct: 401 VEANKATVSILIKYLADGSQAAQTVAAREIRLLAKTGKENRAYIAEAGAIPHLCRLLTSE 460

Query: 61  SHAAQEDAAATLLNLSI--SSREALMSTHGLLDAISHVLGHXXXXXXXXXXXXXAATLHS 120
           +  AQE++   +LNLSI   ++  +M     L++I  VL         XXXXXX      
Sbjct: 461 NAIAQENSVTAMLNLSIYEKNKSRIMEEGDCLESIVSVL-----VSGLXXXXXXXXXXXX 520

Query: 121 LLVVDEYRPIIGSKRDIIYSLVDILKFRKSPQRSIKDALKALFGIALCQPNRSTMVDLGV 180
                                           R  KDA+ AL+ ++    N S M++ G 
Sbjct: 521 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPRGKKDAVTALYNLSTHPDNCSRMIEGGG 580

Query: 181 IPPLFSLVVVGSHAGIVEDASAVVA-QVAGCEDSELAFRKVSGLGVLVDLLDSGTGSSQR 240
           +    SLV    + G+ E+A+  +A  V     +E   ++ S +  L+ ++  GT    R
Sbjct: 581 VS---SLVGALKNEGVAEEAAGALALLVRQSLGAEAIGKEDSAVAGLMGMMRCGT---PR 640

Query: 241 TKENAVSALLNLARWGGERAEEDIKDLGSGILSEIGDVAMNGSEKGKAKAVELLKL 294
            KENAV+ALL L R GG    E +      I   +  +   G+++ + KA  L ++
Sbjct: 641 GKENAVAALLELCRSGGAAVAEKVL-RAPAIAGLLQTLLFTGTKRARRKAASLARV 684

[Close]

BLAST of Carg20566 vs. Swiss-Prot
Match: sp|O81902|PUB8_ARATH (U-box domain-containing protein 8 OS=Arabidopsis thaliana OX=3702 GN=PUB8 PE=2 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 2.5e-10
Identity = 69/225 (30.67%), Postives = 112/225 (49.78%), Query Frame = 0


Query: 9   STLVSRLSSVSEQIRCESLSELRLMTKNDAESRSLIAETGAIPYLAETLYSSSHAAQEDA 68
           STLVS+ SS + ++  ESL+ L  +TK D+  R  + E+GA+    + + S +   QE +
Sbjct: 99  STLVSQSSSNASKL--ESLTRLVRLTKRDSSIRRKVTESGAVRAALDCVDSCNQVLQEKS 158

Query: 69  AATLLNLSISSREAL-MSTHGLLDAISHVLGHXXXXXXXXXXXXXAATLHSLLVVDEYRP 128
            + LLNLS+     + +   G++  I  VL               A  L SL VV+  + 
Sbjct: 159 LSLLLNLSLEDDNKVGLVADGVIRRIVTVL----RVGSPDCKAIAATLLTSLAVVEVNKA 218

Query: 129 IIGSKRDIIYSLVDILKFRKSPQRSIKDALKALFGIALCQPNRSTMVDLGVIPPLFSLVV 188
            IGS  D I +LV +L+     +R  K++  AL+ +     NR  +VD G +P    ++V
Sbjct: 219 TIGSYPDAISALVSLLRVGNDRER--KESATALYALCSFPDNRKRVVDCGSVP----ILV 278

Query: 189 VGSHAGIVEDASAVVAQVAGCEDSELAFRKVSG-LGVLVDLLDSG 232
             + +G+ E A  V+  +  C        KVSG + VLV++L +G
Sbjct: 279 EAADSGL-ERAVEVLGLLVKCRGGREEMSKVSGFVEVLVNVLRNG 310

[Close]

BLAST of Carg20566 vs. Swiss-Prot
Match: sp|Q9C7G1|PUB45_ARATH (U-box domain-containing protein 45 OS=Arabidopsis thaliana OX=3702 GN=PUB45 PE=1 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 3.6e-09
Identity = 66/277 (23.83%), Postives = 130/277 (46.93%), Query Frame = 0


Query: 23  RCESLSELRLMTKNDAESRSLIAETGAI----PYLAETLYSSSHAAQEDAAATLLNLSIS 82
           +C  + ++R++ K+D E+R L+ E G +     +L   L  ++ +AQ+  A  L NL++ 
Sbjct: 439 KCRVVEQIRVLLKDDEEARILMGENGCVEALLQFLGSALNENNASAQKVGAMALFNLAVD 498

Query: 83  S--REALMSTHGLLDAISHVLGHXXXXXXXXXXXXXAATLHSLLVVDEYRPIIGSKRDII 142
           +   + LM   G++  +  +L                A   +L  ++E +P+IGS   + 
Sbjct: 499 NNRNKELMLASGIIPLLEEML------CNPHSHGSVTAIYLNLSCLEEAKPVIGSSLAVP 558

Query: 143 YSLVDILKFRKSPQRSIKDALKALFGIALCQPNRSTMVDLGVIPPLFSLVVVGSHAGIVE 202
           + +V++L      Q  + DAL +LF ++   PN   ++   ++  L SL +        +
Sbjct: 559 F-MVNLLWTETEVQCKV-DALHSLFHLSTYPPNIPCLLSADLVNALQSLTISDEQRWTEK 618

Query: 203 DASAVVAQVAGCEDSELAFRKVSGLGVLVDLLDSGTGSSQRTKENAVSALLNLARWGGER 262
             + ++  V      +      S +  L  +LD+G  + Q   E AVS LL L     E 
Sbjct: 619 SLAVLLNLVLNEAGKDEMVSAPSLVSNLCTILDTGEPNEQ---EQAVSLLLILCN-HSEI 678

Query: 263 AEEDIKDLGSGILSEIGDVAMNGSEKGKAKAVELLKL 294
             E +  L  G++  +  +++NG+++G+ +A +LL L
Sbjct: 679 CSEMV--LQEGVIPSLVSISVNGTQRGRERAQKLLTL 701

[Close]

BLAST of Carg20566 vs. TrEMBL
Match: tr|A0A1S3BCM9|A0A1S3BCM9_CUCME (protein spotted leaf 11 OS=Cucumis melo OX=3656 GN=LOC103488443 PE=4 SV=1)

HSP 1 Score: 510.4 bits (1313), Expect = 3.0e-141
Identity = 275/318 (86.48%), Postives = 288/318 (90.57%), Query Frame = 0


Query: 1   MEVKRRTASTLVSRLSSVSEQIRCESLSELRLMTKNDAESRSLIAETGAIPYLAETLYSS 60
           MEVKRRT STLVSRLSSVSEQ RCESLSELRLMTKND ESRSLI E GA+PYL+ETLYSS
Sbjct: 1   MEVKRRTVSTLVSRLSSVSEQTRCESLSELRLMTKNDVESRSLIVEAGALPYLSETLYSS 60

Query: 61  SHAAQEDAAATLLNLSISSREALMSTHGLLDAISHVLGHXXXXXXXXXXXXXAATLHSLL 120
           SH AQEDAAATLLNLSISSR+ALMSTHGLLDAISHVL H              ATLHSLL
Sbjct: 61  SHVAQEDAAATLLNLSISSRQALMSTHGLLDAISHVLSHHNSSSSASAVQSCGATLHSLL 120

Query: 121 VVDEYRPIIGSKRDIIYSLVDILKFRKSPQRSIKDALKALFGIALCQPNRSTMVDLGVIP 180
           VVDEYRPIIGSKRDIIYSLVDILK+RKSPQRSIKDALKALFGIAL Q NRSTMVDLGVIP
Sbjct: 121 VVDEYRPIIGSKRDIIYSLVDILKYRKSPQRSIKDALKALFGIALHQSNRSTMVDLGVIP 180

Query: 181 PLFSLVVVGSHAGIVEDASAVVAQVAGCEDSELAFRKVSGLGVLVDLLDSGTGSSQRTKE 240
           PLFSLVVVG HAGIVEDASAVVAQVAGCE+SELAFR+VSGLGVLVDLLDSGTGSS RTKE
Sbjct: 181 PLFSLVVVGGHAGIVEDASAVVAQVAGCEESELAFRRVSGLGVLVDLLDSGTGSSLRTKE 240

Query: 241 NAVSALLNLARWGGERAEEDIKDLGSGILSEIGDVAMNGSEKGKAKAVELLKLIASGDID 300
           NAVSALLNLA+WGG+RA ED+KDLGSGILSEI DVA+NGSEKGK KAVELLK++ASG ID
Sbjct: 241 NAVSALLNLAKWGGDRAAEDVKDLGSGILSEIADVAVNGSEKGKTKAVELLKMVASGGID 300

Query: 301 GNVFEDLQLDRLINSCSE 319
           GNVFEDLQL+RLIN CSE
Sbjct: 301 GNVFEDLQLNRLINPCSE 318

[Close]

BLAST of Carg20566 vs. TrEMBL
Match: tr|A0A0A0KDY4|A0A0A0KDY4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G401390 PE=4 SV=1)

HSP 1 Score: 503.1 bits (1294), Expect = 4.7e-139
Identity = 285/318 (89.62%), Postives = 299/318 (94.03%), Query Frame = 0


Query: 1   MEVKRRTASTLVSRLSSVSEQIRCESLSELRLMTKNDAESRSLIAETGAIPYLAETLYSS 60
           MEVK R  STLVSRLSSVSEQIRCESLSELRLMTKNDA+SRSLI   GA+PYL+ETLYSS
Sbjct: 1   MEVKGRAVSTLVSRLSSVSEQIRCESLSELRLMTKNDAQSRSLIVHAGALPYLSETLYSS 60

Query: 61  SHAAQEDAAATLLNLSISSREALMSTHGLLDAISHVLGHXXXXXXXXXXXXXAATLHSLL 120
           SH  QEDAAATLLNLSISSREALMSTHGLLDAISHVL HXXXXXXXXXXXXXAATLHSLL
Sbjct: 61  SHLPQEDAAATLLNLSISSREALMSTHGLLDAISHVLSHXXXXXXXXXXXXXAATLHSLL 120

Query: 121 VVDEYRPIIGSKRDIIYSLVDILKFRKSPQRSIKDALKALFGIALCQPNRSTMVDLGVIP 180
           VVDEYRPIIGSKRDIIYSLVDILK+RKSPQRSIKDALKALFGIAL Q NRSTMVDLGVIP
Sbjct: 121 VVDEYRPIIGSKRDIIYSLVDILKYRKSPQRSIKDALKALFGIALHQSNRSTMVDLGVIP 180

Query: 181 PLFSLVVVGSHAGIVEDASAVVAQVAGCEDSELAFRKVSGLGVLVDLLDSGTGSSQRTKE 240
           PLFSLVVVG HAGIVEDASAVVAQVAGCE+SELAFR+VSGLGVLVDLLDSGTGSS RTKE
Sbjct: 181 PLFSLVVVGGHAGIVEDASAVVAQVAGCEESELAFRRVSGLGVLVDLLDSGTGSSLRTKE 240

Query: 241 NAVSALLNLARWGGERAEEDIKDLGSGILSEIGDVAMNGSEKGKAKAVELLKLIASGDID 300
           NAVSALLNLA+WGG+RA ED+KDLGSGILSEI DVA+NGSEKGK KAVELLK++ASG ID
Sbjct: 241 NAVSALLNLAKWGGDRAAEDVKDLGSGILSEIADVAVNGSEKGKTKAVELLKMVASGGID 300

Query: 301 GNVFEDLQLDRLINSCSE 319
           G VF+DLQL+RLIN CSE
Sbjct: 301 GKVFDDLQLNRLINPCSE 318

[Close]

BLAST of Carg20566 vs. TrEMBL
Match: tr|A0A1Q3BND6|A0A1Q3BND6_CEPFO (Arm domain-containing protein (Fragment) OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_12910 PE=4 SV=1)

HSP 1 Score: 369.4 bits (947), Expect = 8.2e-99
Identity = 199/294 (67.69%), Postives = 237/294 (80.61%), Query Frame = 0


Query: 1   MEVKRRTASTLVSRLSSVSEQIRCESLSELRLMTKNDAESRSLIAETGAIPYLAETLYSS 60
           MEVKRRT  TLV++LSSVSEQ R E+L ELRL+TK+DA+SRSL+AETGAIPYLAE LYSS
Sbjct: 1   MEVKRRTTRTLVAKLSSVSEQTRAEALCELRLLTKHDADSRSLLAETGAIPYLAEILYSS 60

Query: 61  SHAAQEDAAATLLNLSISSREALMSTHGLLDAISHVLGHXXXXXXXXXXXXXAATLHSLL 120
           SH +QE+A ATLLNLSISSREALMST GLLDA+SH L H             AATLHSLL
Sbjct: 61  SHDSQENATATLLNLSISSREALMSTRGLLDALSHALRHHSSTTSPLAVQSSAATLHSLL 120

Query: 121 VVDEYRPIIGSKRDIIYSLVDILKFRKSPQRSIKDALKALFGIALCQPNRSTMVDLGVIP 180
           + + YRPIIGSKRDIIYSL++I K   SP RSIKD+LKALFGI+L   NR+TM++LG + 
Sbjct: 121 IDESYRPIIGSKRDIIYSLIEITKCPNSPPRSIKDSLKALFGISLYPLNRNTMIELGAVA 180

Query: 181 PLFSLVVVGSHAGIVEDASAVVAQVAGCEDSELAFRKVSGLGVLVDLLDSGTGSSQRTKE 240
           PLFSLVV     GIVEDA+AV+AQVAGCE+SE AF +VSG+GVLVDLLD GTGSS+R KE
Sbjct: 181 PLFSLVVKDGRVGIVEDATAVIAQVAGCEESEEAFMRVSGIGVLVDLLDMGTGSSERVKE 240

Query: 241 NAVSALLNLARWGGERAEEDIKDLGSGILSEIGDVAMNGSEKGKAKAVELLKLI 295
           NAV+ALLNL R G ER   +++D+G+G++  I DVA NGS KGK+KA+ LLK++
Sbjct: 241 NAVAALLNLVRTGSERVAREVRDMGAGVVDGIADVAENGSAKGKSKALALLKVV 294

[Close]

BLAST of Carg20566 vs. TrEMBL
Match: tr|A0A2I4GZS8|A0A2I4GZS8_9ROSI (U-box domain-containing protein 11-like OS=Juglans regia OX=51240 GN=LOC109012309 PE=4 SV=1)

HSP 1 Score: 364.0 bits (933), Expect = 3.4e-97
Identity = 201/314 (64.01%), Postives = 243/314 (77.39%), Query Frame = 0


Query: 1   MEVKRRTASTLVSRLSSVSEQIRCESLSELRLMTKNDAESRSLIAETGAIPYLAETLYSS 60
           MEVKRRT  +L+++L SVSEQ R E+LSELRLMTK DA++R LIA+ GA+PYLAETLYSS
Sbjct: 1   MEVKRRTVRSLITKLGSVSEQTRAEALSELRLMTKLDADTRPLIADAGAVPYLAETLYSS 60

Query: 61  SHAAQEDAAATLLNLSISSREALMSTHGLLDAISHVLGHXXXXXXXXXXXXXAATLHSLL 120
           +HAAQ+DAAATLLNLSISSR  LMST GLLDA+SHVL H             AATLHSLL
Sbjct: 61  AHAAQDDAAATLLNLSISSRAVLMSTRGLLDALSHVLRHHASSSYAYAVQSSAATLHSLL 120

Query: 121 VVDEYRPIIGSKRDIIYSLVDILKFRKSPQRSIKDALKALFGIALCQPNRSTMVDLGVIP 180
           + DEYRPIIGSKRDIIYSL+DI+K   S  RS+KDALKALFGI+L   NR T++DLG + 
Sbjct: 121 IDDEYRPIIGSKRDIIYSLIDIIKHSGSSVRSVKDALKALFGISLYPLNRKTVIDLGGVG 180

Query: 181 PLFSLVVVGSHAGIVEDASAVVAQVAGCEDSELAFRKVSGLGVLVDLLDSGTGSSQRTKE 240
           PLFSL++ G   G+VEDA+AV+AQVAGCE+SE AFRKVSG+GVLVDLLD  TGSS R KE
Sbjct: 181 PLFSLILKGFATGVVEDATAVIAQVAGCEESEEAFRKVSGIGVLVDLLDGATGSSMRVKE 240

Query: 241 NAVSALLNLARWGGERAEEDIKDLGSGILSEIGDVAMNGSEKGKAKAVELLKLIASGDID 300
           NAV+ALLNL R G ER   ++++ G  ++  I DV+ NGS KGK+KAV LLK++  G+ +
Sbjct: 241 NAVAALLNLVRCGRERIGREVREKGMLVVDGITDVSENGSSKGKSKAVALLKVLYGGN-N 300

Query: 301 GNVFEDLQLDRLIN 315
           G +  D + D L N
Sbjct: 301 GCLVRDERFDSLFN 313

[Close]

BLAST of Carg20566 vs. TrEMBL
Match: tr|A0A067KWK2|A0A067KWK2_JATCU (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_24541 PE=4 SV=1)

HSP 1 Score: 362.5 bits (929), Expect = 1.0e-96
Identity = 198/309 (64.08%), Postives = 244/309 (78.96%), Query Frame = 0


Query: 1   MEVKRRTASTLVSRLSSVSEQIRCESLSELRLMTKNDAESRSLIAETGAIPYLAETLYSS 60
           MEVKRRTA  LVS+LSSVSE+ R E+L+ELRL+TK+DA+SR +IAE GAIPYLAETLYSS
Sbjct: 1   MEVKRRTARLLVSKLSSVSEKTRAEALAELRLITKHDADSRQIIAEAGAIPYLAETLYSS 60

Query: 61  SHAAQEDAAATLLNLSISSREALMSTHGLLDAISHVLGHXXXXXXXXXXXXXAATLHSLL 120
           SH +QE+AAATLLN+SISSRE+LMST GLLDA++H L H             AATLHSLL
Sbjct: 61  SHDSQENAAATLLNISISSRESLMSTRGLLDALAHALSHHATTTAPTAIQSSAATLHSLL 120

Query: 121 VVDEYRPIIGSKRDIIYSLVDILKFRKSPQRSIKDALKALFGIALCQPNRSTMVDLGVIP 180
           VVD YRPIIGSKRDI+YSL+DILK  KSP RSIKDALKALFGIAL   NRST++DLG +P
Sbjct: 121 VVDSYRPIIGSKRDIVYSLIDILKTPKSPPRSIKDALKALFGIALYPLNRSTLIDLGAVP 180

Query: 181 PLFSLVVVGSHAGIVEDASAVVAQVAGCEDSELAFRKVSGLGVLVDLLDSGTGSSQRTKE 240
            LFSLV+     GIVEDA+AV+AQ+AGCE+SE  F K SG+G+LVDLLD GTGSS+R KE
Sbjct: 181 ALFSLVLKDGRVGIVEDATAVIAQIAGCEESEEEFAKFSGVGILVDLLDLGTGSSERIKE 240

Query: 241 NAVSALLNLARWGGERAEEDIKDLGSGILSEIGDVAMNGSEKGKAKAVELLKLIASGDID 300
           NAV+ALLNL R G E    +++++ +G++  I +V  +GS KGK+KA+ LL++I  G  +
Sbjct: 241 NAVAALLNLVRSGREGVVGNVREMAAGVVEGIKEVVEHGSAKGKSKAIALLEVIEDGSSN 300

Query: 301 GNV-FEDLQ 309
            ++ F+ LQ
Sbjct: 301 TSLRFDSLQ 309

The following BLAST results are available for this feature:

BLAST of Carg20566 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023538067.1	2.9e-156	99.69	protein spotted leaf 11 [Cucurbita pepo subsp. pepo]	[more]
XP_022951384.1	4.9e-156	99.69	protein spotted leaf 11 [Cucurbita moschata]	[more]
XP_023002054.1	2.1e-151	97.48	protein spotted leaf 11 [Cucurbita maxima]	[more]
XP_008445408.1	4.5e-141	86.48	PREDICTED: protein spotted leaf 11 [Cucumis melo]	[more]
XP_004146768.1	7.1e-139	89.62	PREDICTED: protein spotted leaf 11 [Cucumis sativus] >KGN47768.1 hypothetical pr...	[more]

BLAST of Carg20566 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G08315.1	1.4e-88	60.25	ARM repeat superfamily protein	[more]
AT5G01830.1	9.3e-16	28.75	ARM repeat superfamily protein	[more]
AT1G10560.1	3.5e-15	25.56	plant U-box 18	[more]
AT1G29340.1	2.8e-12	28.04	plant U-box 17	[more]
AT4G21350.1	1.4e-11	30.67	plant U-box 8	[more]

BLAST of Carg20566 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9LZW3\|PUB16_ARATH	1.7e-14	28.75	U-box domain-containing protein 16 OS=Arabidopsis thaliana OX=3702 GN=PUB16 PE=2...	[more]
sp\|Q9XIJ5\|PUB18_ARATH	6.4e-14	25.56	U-box domain-containing protein 18 OS=Arabidopsis thaliana OX=3702 GN=PUB18 PE=1...	[more]
sp\|Q9C7R6\|PUB17_ARATH	5.1e-11	28.04	U-box domain-containing protein 17 OS=Arabidopsis thaliana OX=3702 GN=PUB17 PE=2...	[more]
sp\|O81902\|PUB8_ARATH	2.5e-10	30.67	U-box domain-containing protein 8 OS=Arabidopsis thaliana OX=3702 GN=PUB8 PE=2 S...	[more]
sp\|Q9C7G1\|PUB45_ARATH	3.6e-09	23.83	U-box domain-containing protein 45 OS=Arabidopsis thaliana OX=3702 GN=PUB45 PE=1...	[more]

BLAST of Carg20566 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3BCM9\|A0A1S3BCM9_CUCME	3.0e-141	86.48	protein spotted leaf 11 OS=Cucumis melo OX=3656 GN=LOC103488443 PE=4 SV=1	[more]
tr\|A0A0A0KDY4\|A0A0A0KDY4_CUCSA	4.7e-139	89.62	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G401390 PE=4 SV=1	[more]
tr\|A0A1Q3BND6\|A0A1Q3BND6_CEPFO	8.2e-99	67.69	Arm domain-containing protein (Fragment) OS=Cephalotus follicularis OX=3775 GN=C...	[more]
tr\|A0A2I4GZS8\|A0A2I4GZS8_9ROSI	3.4e-97	64.01	U-box domain-containing protein 11-like OS=Juglans regia OX=51240 GN=LOC10901230...	[more]
tr\|A0A067KWK2\|A0A067KWK2_JATCU	1.0e-96	64.08	Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_24541 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005488	binding
GO:0005515	protein binding

Vocabulary: **INTERPRO**
Term	Definition
IPR016024	ARM-type_fold
IPR011989	ARM-like
IPR000225	Armadillo

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005515	protein binding
molecular_function	GO:0005488	binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg20566-RA	Carg20566-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000225	Armadillo	SMART	SM00185	arm_5	coord: 208..251 e-value: 0.033 score: 23.3 coord: 37..77 e-value: 1.5 score: 17.9 coord: 166..207 e-value: 0.39 score: 19.8
IPR011989	Armadillo-like helical	GENE3D	G3DSA:1.25.10.10		coord: 2..294 e-value: 1.3E-29 score: 104.9
None	No IPR available	PANTHER	PTHR23315	BETA CATENIN-RELATED ARMADILLO REPEAT-CONTAINING	coord: 1..297
None	No IPR available	PANTHER	PTHR23315:SF132	SUBFAMILY NOT NAMED	coord: 1..297
IPR016024	Armadillo-type fold	SUPERFAMILY	SSF48371	ARM repeat	coord: 8..299

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg20566	Cla022050	Watermelon (97103) v1	carwmB0649
Carg20566	Csa6G401390	Cucumber (Chinese Long) v2	carcuB0671
Carg20566	MELO3C011394	Melon (DHL92) v3.5.1	carmeB0649
Carg20566	ClCG08G010670	Watermelon (Charleston Gray)	carwcgB0633
Carg20566	CSPI06G20830	Wild cucumber (PI 183967)	carcpiB0681
Carg20566	Cucsa.005180	Cucumber (Gy14) v1	carcgyB0724
Carg20566	CmaCh12G001220	Cucurbita maxima (Rimu)	carcmaB0920
Carg20566	CmoCh12G000990	Cucurbita moschata (Rifu)	carcmoB0893
Carg20566	Lsi08G009220	Bottle gourd (USVL1VR-Ls)	carlsiB593
Carg20566	Cp4.1LG07g00960	Cucurbita pepo (Zucchini)	carcpeB0925
Carg20566	CsGy6G020170	Cucumber (Gy14) v2	carcgybB0647
Carg20566	MELO3C011394.2	Melon (DHL92) v3.6.1	carmedB0659
Carg20566	CsaV3_6G035860	Cucumber (Chinese Long) v3	carcucB0683
Carg20566	Cla97C08G153550	Watermelon (97103) v2	carwmbB0679
Carg20566	Bhi04G000945	Wax gourd	carwgoB0766

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg20566	Silver-seed gourd	carcarB164
Carg20566	Cucurbita maxima (Rimu)	carcmaB0921
Carg20566	Cucurbita moschata (Rifu)	carcmoB0894
Carg20566	Cucurbita pepo (Zucchini)	carcpeB0924
Carg20566	Wax gourd	carwgoB0764