CmoCh12G000770 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AGCCTTAAAAAAAGACTACAAATTCGCTGTTGACTGCAAATTGAGCCAAAAAAAAAATTTCATTATTTAATTTGATTTCATCATACAATATGAAAGCTTGGTAGGTTAGAAATTCATATCACAGATTTTGATTTGATTCATTTTTTTCGAGAGTGAGAGCGCGCCATGGATCGTAATCAGCCACTGCGACCACCATCTCCGCAGCCTCGTTCTTCAGAATCCGGCGGCAGTTTCTCCTCCGTACTCACTGTTTTCGCCTCCTTCATCGCCATCTTTTCCATGGTATCATTTCGCTTCCTCATTGAGCTGCAAAACGCGCTAGGTTTCGTGGTTTTGTTTTTTGAATTCCATTTTGTTACGGCTTAGTTTTCGATGAGCGAGTATTGATATACCTTTTGTTTATCTGAGGTCAAAGGCTTTTGTCCAAGCTGAATGCGTTTGTTGTTGTTGTTGTTTTCTGTGTTGTCATCGTTGCGAAATGGAGTTAGAAAGCTAATAAGTTTGAGTTATACTTCGCTTATATCGCACTTCGTTGGTCGGCTTCATGTACTTAAGAACCTGCTTGTTGGATTTGTAATACTTTCATAACTACTACTGTTTGATTGTGTAATTGGCTGTTTACTTGTTTTTAACTCATATTCAGTGTCATATGTGGAAGTTACGAAGAGGTTATCCATCGATTAAGATAGATGTGGAGTCTATTGCACAAGTTTCTGTAATTGTTGCCATCAATCGTATATTATCAATTTTGTTTTAAAGAAAAGGAAGAACATATGATTTATCTTCTGTCACGTAGTGATCTTGTGATTCTGATATTCTAGCAGTATGATTGAAACAGTCGTGGCTATCAAAAGTAGGGGCCTGAAATAGTTGAGAAAATTTGACCAAATTGTAGGATAAGAAAAAAGGTTCAGCAAATTTAAGCAGACAGTGAATAGTTTGTGTAAACATGTAAGATCTCACGTCGGTTGGAGAGGAGAACGAAACATTCCTTATAAGGGTATGGAAACCTCTCCCTAATAGACGTGTTTTAAAACCTTGAGGCTTGGGCTGTTACAAATGGTATCAGAGCCAGATATCGAGCGGTGTATCAGATCCCACATCAGTTGGAGAGGAGAATGTATCATTACTTATAACAGTGTGGAAACCTCTCTCTAATAGACACGTTTTAAAATTGTGAGGCTGACAGCGATGCGTTACGGGCTTTTACGGGCCAAAGCGGACAATATTTGCTAGCAGTAAGCTTGGACTGTTACAAAAACATGACAAATTTCACGTTTCAGACATGGCATGTTTACTATGCTTAGTAAGTAAATGAGAATTTGGATCACTATTGGTGTTGGTTTGGCAATCAGCCAAGTGAAAAATTGAACCTCTTTACTTATTGGGTGTTTTAGCTATGCAAGTCTTGTTACAGGCACAACTTGGTCAAGAAATGGTATCAATTTTGAGATCATTGTGCTTGATCTGGTTGATTTTAGTGGTTGTAGAACTGCATTTTTATGCATGCAGGTGCTGATTCCATCTCAATCAAACTTCAAAAGTAACTTATCTATTTTACACCAAGTACCAGAAGGTCATGTTGGAGTATATTGGAGAGGAGGTGCCCTTCTGAAGACAATAACGGATCCAGGTTTAAGTCTCTCCGTTCCGCCCGATTTTTCATGGTTATACAGATCATATGTCCTACTGCCTTTATTCATGTGAAAATTTCAGGTTTCCATCTAAAGTTGCCTCTGTTAACCCAGTTTGTGCCTGTTCAAGTTACCCTCCAGACTGATCAAGTAAATTAGATTTATTTACAATTACTATGATGATATAAGCATTACAATATTTTTCATTGGGGACACAAAATTCTTAATGCCAATTTTAGGATTTCAATATTTGAAGAGGTCCTAATTGATGTCCTTGATGCAGGTTAGGGATATTCCATGTGGTACTAAGGGGGGCGTAATGATCAACTTCGAGAAAATCGAGGTGAAATTACTAGGAAATTCCTTCCCAATAATTGATGTTAGATTTTCTTATTCTTCATCTTAGTTCATAAGGATGCTGCTTTCAGGTTGTCAATCGCCTCCGCAAAGAATATGTGCATGAAACCCTGGTCCACTATGGTGTGAATTATGATAACATATGGATATATGACAAGATTCATCATGAAATCAATCAGTTTTGTAGTTCTCACAGTCTTCAGCAAGTTTATATTGATGTTTTCGATCAGGTACGTAAAAAAATGAACATAAAATGTGTTCTTTTAAAACCTTGCGTAGTTTTGTGATTGTTTCTATTCACACAAGCATCCTGCAGAGCTGATACGAGCAACATGCTAAGTGTATATTCTAGCTATTAACTTACTGCCTTACTTGTTGAGTCATTTGTGTCAAGTATATTTTTCTGTTCTTCAGCTGTGAATTCTTTCAAGGAATCCTTTCAAGGCTTTAAAAGCAGATGTTTTCATAAATTCGTCGTAGATACTTTTCTCCATTGGCATCGAGCATTACTTTCGCATCAATGATCTGTGACTGTTTTTCGTATTCAGATTGATGAAAAGATGAAAGATGCCCTCCAAGGTGACTGTACACGTTATGCTCCAGGTATTGAAATAATCAGTGTTCGTGTAACAAAGCCCACCATCCCACATTCTATCAGAAAGAACTTTGAAGACATGGAAGTGGAGCGTACAAAGGTGCATCTCTAACATGGGAAAACAACCTTTTTCTTGTTCTGTTTGAGTTTTGAAAGCATATGTTGAACGTATGAAAGAGCATCATTGCATACTCATAATCTTGCATATCTTGGTTCAAAACCATGTTTACACTTTCAATTCCAAAAACGTCTATATGGATTGACATCGATACAGATTACTGCTCGTCTTAATTCTAATGCTATGAAATCTTGGACATACTTGGATAGGTTTTAATTGCTATAGAGAGACAAAGGGTAGTGGAGAAAGAGGCAGAAACCAACAAAAAAATGGCGATCAGTGAAGCTGAGAAGAATGCTAACGTTAGCAGGATCCTCATGGACCAGAAACTAATGGAAAAGGAGAGTTCCAGGAGACAGCAAGAAATTGATAACCACATCTATCTTGCTCGTGAAAAAAGCCTCGCCGACGCCAATTATTACCGGTACTTCTCTCCTTTTGCTTTTCCAACCTCACCTCGATTTGTCGAAGTGAGAAATGAATGCAGTTTTAGAAACCGAATGTGTAGTGAGTGATATTCATGTCTTTTCATCCTTTTATCAGTGTTCTAAGAGAAGCTGAAGCGAACAAGTTGAAGCTTACACCCCAGTTTCTTGAGCTTAAATTCATCGAGGCCATTGCTGATAATACAAAGATTTTCTTTGGGGACAAGGCACGCGCTCGGTCTCTTTTTGCTCTCAATATATACGCGTTACGTGTCTATCACTAACTCGGTAGCTTTGGTTCTGCTAGGTTCCCAACATGGTTTTGGATCAGAGGTTGCTTGGAAACTTCCTGCATCAGGTTTCAGAAGATGCATCAAGAAAAGCATCCGGAGATGAAACCTTAGAAATATAGATCCAAGATTCAGCCTCTAATGATCAGGTATACGGGTCTTCCTCTCTTTCTTTCTCAATATTGGAAAAACTCTCTCATGGTACATGTCAAAAGAATTCTCCACGGAGCACGAACAGGTTCTTTCTTTCGTCCTTCCGAGATCAAACTGTTTACTTTGCAGAGGGCACGTGGAGGGAAACTTTGGTATTCGGATATTATTTGTATCAAATTCATTTCTTTATGAGAACGTTAGGATTCTTCGTGTTCTTTTGCTCGGTGAAGTTTCGGATAAAAACGTTATAGCATTTCAAGTGAATCAATAATAACCCTTGGTTCTTCAATGTTGTTAGGCTAATACACGAACTTCTGCTTGACCAGGGAAGAGTGAAGATGCTTGATTGTGATCTCTTGTTTAGCAAAGAATTCTTCTTCACCAATTTTGAGGACCTTACTAAGCAGTGTGATTTGAGCCTCCTTTTGAATAAAATTAGATAAAAGAACGAATTGATCCG AGCCTTAAAAAAAGACTACAAATTCGCTGTTGACTGCAAATTGAGCCAAAAAAAAAATTTCATTATTTAATTTGATTTCATCATACAATATGAAAGCTTGGTAGGTTAGAAATTCATATCACAGATTTTGATTTGATTCATTTTTTTCGAGAGTGAGAGCGCGCCATGGATCGTAATCAGCCACTGCGACCACCATCTCCGCAGCCTCGTTCTTCAGAATCCGGCGGCAGTTTCTCCTCCGTACTCACTGTTTTCGCCTCCTTCATCGCCATCTTTTCCATGGTGCTGATTCCATCTCAATCAAACTTCAAAAGTAACTTATCTATTTTACACCAAGTACCAGAAGGTCATGTTGGAGTATATTGGAGAGGAGGTGCCCTTCTGAAGACAATAACGGATCCAGGTTTCCATCTAAAGTTGCCTCTGTTAACCCAGTTTGTGCCTGTTCAAGTTACCCTCCAGACTGATCAAGTTAGGGATATTCCATGTGGTACTAAGGGGGGCGTAATGATCAACTTCGAGAAAATCGAGGTTGTCAATCGCCTCCGCAAAGAATATGTGCATGAAACCCTGGTCCACTATGGTGTGAATTATGATAACATATGGATATATGACAAGATTCATCATGAAATCAATCAGTTTTGTAGTTCTCACAGTCTTCAGCAAGTTTATATTGATGTTTTCGATCAGATTGATGAAAAGATGAAAGATGCCCTCCAAGGTGACTGTACACGTTATGCTCCAGGTATTGAAATAATCAGTGTTCGTGTAACAAAGCCCACCATCCCACATTCTATCAGAAAGAACTTTGAAGACATGGAAGTGGAGCGTACAAAGGTTTTAATTGCTATAGAGAGACAAAGGGTAGTGGAGAAAGAGGCAGAAACCAACAAAAAAATGGCGATCAGTGAAGCTGAGAAGAATGCTAACGTTAGCAGGATCCTCATGGACCAGAAACTAATGGAAAAGGAGAGTTCCAGGAGACAGCAAGAAATTGATAACCACATCTATCTTGCTCGTGAAAAAAGCCTCGCCGACGCCAATTATTACCGTGTTCTAAGAGAAGCTGAAGCGAACAAGTTGAAGCTTACACCCCAGTTTCTTGAGCTTAAATTCATCGAGGCCATTGCTGATAATACAAAGATTTTCTTTGGGGACAAGGTTCCCAACATGGTTTTGGATCAGAGGTTGCTTGGAAACTTCCTGCATCAGGTTTCAGAAGATGCATCAAGAAAAGCATCCGGAGATGAAACCTTAGAAATATAGATCCAAGATTCAGCCTCTAATGATCAGGTATACGGGTCTTCCTCTCTTTCTTTCTCAATATTGGAAAAACTCTCTCATGGTACATGTCAAAAGAATTCTCCACGGAGCACGAACAGGTTCTTTCTTTCGTCCTTCCGAGATCAAACTGTTTACTTTGCAGAGGGCACGTGGAGGGAAACTTTGGTATTCGGATATTATTTGTATCAAATTCATTTCTTTATGAGAACGTTAGGATTCTTCGTGTTCTTTTGCTCGGTGAAGTTTCGGATAAAAACGTTATAGCATTTCAAGTGAATCAATAATAACCCTTGGTTCTTCAATGTTGTTAGGCTAATACACGAACTTCTGCTTGACCAGGGAAGAGTGAAGATGCTTGATTGTGATCTCTTGTTTAGCAAAGAATTCTTCTTCACCAATTTTGAGGACCTTACTAAGCAGTGTGATTTGAGCCTCCTTTTGAATAAAATTAGATAAAAGAACGAATTGATCCG ATGGATCGTAATCAGCCACTGCGACCACCATCTCCGCAGCCTCGTTCTTCAGAATCCGGCGGCAGTTTCTCCTCCGTACTCACTGTTTTCGCCTCCTTCATCGCCATCTTTTCCATGGTGCTGATTCCATCTCAATCAAACTTCAAAAGTAACTTATCTATTTTACACCAAGTACCAGAAGGTCATGTTGGAGTATATTGGAGAGGAGGTGCCCTTCTGAAGACAATAACGGATCCAGGTTTCCATCTAAAGTTGCCTCTGTTAACCCAGTTTGTGCCTGTTCAAGTTACCCTCCAGACTGATCAAGTTAGGGATATTCCATGTGGTACTAAGGGGGGCGTAATGATCAACTTCGAGAAAATCGAGGTTGTCAATCGCCTCCGCAAAGAATATGTGCATGAAACCCTGGTCCACTATGGTGTGAATTATGATAACATATGGATATATGACAAGATTCATCATGAAATCAATCAGTTTTGTAGTTCTCACAGTCTTCAGCAAGTTTATATTGATGTTTTCGATCAGATTGATGAAAAGATGAAAGATGCCCTCCAAGGTGACTGTACACGTTATGCTCCAGGTATTGAAATAATCAGTGTTCGTGTAACAAAGCCCACCATCCCACATTCTATCAGAAAGAACTTTGAAGACATGGAAGTGGAGCGTACAAAGGTTTTAATTGCTATAGAGAGACAAAGGGTAGTGGAGAAAGAGGCAGAAACCAACAAAAAAATGGCGATCAGTGAAGCTGAGAAGAATGCTAACGTTAGCAGGATCCTCATGGACCAGAAACTAATGGAAAAGGAGAGTTCCAGGAGACAGCAAGAAATTGATAACCACATCTATCTTGCTCGTGAAAAAAGCCTCGCCGACGCCAATTATTACCGTGTTCTAAGAGAAGCTGAAGCGAACAAGTTGAAGCTTACACCCCAGTTTCTTGAGCTTAAATTCATCGAGGCCATTGCTGATAATACAAAGATTTTCTTTGGGGACAAGGTTCCCAACATGGTTTTGGATCAGAGGTTGCTTGGAAACTTCCTGCATCAGGTTTCAGAAGATGCATCAAGAAAAGCATCCGGAGATGAAACCTTAGAAATATAG
BLAST of CmoCh12G000770 vs. Swiss-Prot
Match: ERLN2_MOUSE (Erlin-2 OS=Mus musculus GN=Erlin2 PE=1 SV=1) HSP 1 Score: 333.2 bits (853), Expect = 3.6e-90 Identity = 174/329 (52.89%), Postives = 237/329 (72.04%), Query Frame = 1
BLAST of CmoCh12G000770 vs. Swiss-Prot
Match: ERL2B_XENLA (Erlin-2-B OS=Xenopus laevis GN=erlin2-b PE=2 SV=1) HSP 1 Score: 333.2 bits (853), Expect = 3.6e-90 Identity = 168/292 (57.53%), Postives = 222/292 (76.03%), Query Frame = 1
BLAST of CmoCh12G000770 vs. Swiss-Prot
Match: ERLN2_PONAB (Erlin-2 OS=Pongo abelii GN=ERLIN2 PE=2 SV=1) HSP 1 Score: 329.7 bits (844), Expect = 4.0e-89 Identity = 173/330 (52.42%), Postives = 238/330 (72.12%), Query Frame = 1
BLAST of CmoCh12G000770 vs. Swiss-Prot
Match: ERLN2_HUMAN (Erlin-2 OS=Homo sapiens GN=ERLIN2 PE=1 SV=1) HSP 1 Score: 329.7 bits (844), Expect = 4.0e-89 Identity = 173/330 (52.42%), Postives = 238/330 (72.12%), Query Frame = 1
BLAST of CmoCh12G000770 vs. Swiss-Prot
Match: ERLN2_RAT (Erlin-2 OS=Rattus norvegicus GN=Erlin2 PE=1 SV=1) HSP 1 Score: 329.3 bits (843), Expect = 5.2e-89 Identity = 166/302 (54.97%), Postives = 227/302 (75.17%), Query Frame = 1
BLAST of CmoCh12G000770 vs. TrEMBL
Match: A0A0A0KIQ3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G366440 PE=4 SV=1) HSP 1 Score: 636.7 bits (1641), Expect = 1.7e-179 Identity = 321/348 (92.24%), Postives = 335/348 (96.26%), Query Frame = 1
BLAST of CmoCh12G000770 vs. TrEMBL
Match: U5G1X9_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0010s16620g PE=4 SV=1) HSP 1 Score: 573.5 bits (1477), Expect = 1.8e-160 Identity = 291/357 (81.51%), Postives = 322/357 (90.20%), Query Frame = 1
BLAST of CmoCh12G000770 vs. TrEMBL
Match: B9REE7_RICCO (SPFH domain-containing protein 2, putative OS=Ricinus communis GN=RCOM_1620900 PE=4 SV=1) HSP 1 Score: 573.5 bits (1477), Expect = 1.8e-160 Identity = 289/355 (81.41%), Postives = 321/355 (90.42%), Query Frame = 1
BLAST of CmoCh12G000770 vs. TrEMBL
Match: A0A067L268_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_15705 PE=4 SV=1) HSP 1 Score: 572.8 bits (1475), Expect = 3.0e-160 Identity = 293/363 (80.72%), Postives = 324/363 (89.26%), Query Frame = 1
BLAST of CmoCh12G000770 vs. TrEMBL
Match: M5XEJ8_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa007348mg PE=4 SV=1) HSP 1 Score: 557.0 bits (1434), Expect = 1.7e-155 Identity = 285/350 (81.43%), Postives = 316/350 (90.29%), Query Frame = 1
BLAST of CmoCh12G000770 vs. TAIR10
Match: AT2G03510.1 (AT2G03510.1 SPFH/Band 7/PHB domain-containing membrane-associated protein family) HSP 1 Score: 517.3 bits (1331), Expect = 7.6e-147 Identity = 263/353 (74.50%), Postives = 298/353 (84.42%), Query Frame = 1
BLAST of CmoCh12G000770 vs. NCBI nr
Match: gi|659089346|ref|XP_008445457.1| (PREDICTED: erlin-2-B [Cucumis melo]) HSP 1 Score: 669.1 bits (1725), Expect = 4.5e-189 Identity = 337/366 (92.08%), Postives = 355/366 (96.99%), Query Frame = 1
BLAST of CmoCh12G000770 vs. NCBI nr
Match: gi|778715434|ref|XP_011657401.1| (PREDICTED: erlin-2-B [Cucumis sativus]) HSP 1 Score: 636.7 bits (1641), Expect = 2.5e-179 Identity = 321/348 (92.24%), Postives = 335/348 (96.26%), Query Frame = 1
BLAST of CmoCh12G000770 vs. NCBI nr
Match: gi|255542044|ref|XP_002512086.1| (PREDICTED: erlin-2-B [Ricinus communis]) HSP 1 Score: 573.5 bits (1477), Expect = 2.5e-160 Identity = 289/355 (81.41%), Postives = 321/355 (90.42%), Query Frame = 1
BLAST of CmoCh12G000770 vs. NCBI nr
Match: gi|566191182|ref|XP_006378572.1| (hypothetical protein POPTR_0010s16620g [Populus trichocarpa]) HSP 1 Score: 573.5 bits (1477), Expect = 2.5e-160 Identity = 291/357 (81.51%), Postives = 322/357 (90.20%), Query Frame = 1
BLAST of CmoCh12G000770 vs. NCBI nr
Match: gi|802568076|ref|XP_012067769.1| (PREDICTED: erlin-2-B [Jatropha curcas]) HSP 1 Score: 572.8 bits (1475), Expect = 4.3e-160 Identity = 293/363 (80.72%), Postives = 324/363 (89.26%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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