CmoCh05G004680 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TGAGAAATTCCTTTCTTGCATCAAGTTTTCTTTCGCTCGAAAAACAGTTGGATTCAATCAGCCAAGAGCACAGAACTCCACTCGACGCTGAAAGACCTTCCTGATTTGATTCAGTTGTTGAAGCTGAGATTGCGGCATGGATCATAATCAGCCACAGCGGCCACCATACCCGCAGACTCGTCCTCCAGAATTCGGCGGCAGTTTTTCATCCATACTCGCAGTTTTCGCCGCCTTCATCGCCATCTTTTCCATGGTAACTCATTACTTCCTTATCGAGCTGTAAAACGATCTAGGTTTCGTGGTTTTGTTTTCTGAATTTCATTTAGTTACGACTTAGTCTTCGATTATCGATTATTGATACGCTTTATTTTTGTCTAAGCTCGAGGGATTTTGTCCGAACTAAGTGCGTTGATTTTTCGTCTATATTGTCTCCGATGCAATAGGGAGTTAGAATACTAATACGCTCGAGTTATACTTGCCTGTATCGGTAGTTAGTCGGTTTCTTGTACTGAAGAATATGTTTCTTCGATTCATAATAAGTTCATAAATAGTATTGTTTGATTGTGTAATTTGCTGTTTGTTTGTTTTTAATCCATATTCGGTGCCATATGTGAAAGTTACAAAGAGGTTATACAACCGATTAAAATGGATCTGGAGTCCATTGCAAAAGTTTCTGTAACTAGTGCCATCAGTGAAAACATTTAGCGTATTACGAGATTTGCCAAATTCAATGATGTATTATTAAAAAATGAAGAAAGAATATTCTATTTATCTTCGATTACAGAGTAGTCTTATGACTCTGATCTTAGCAGCATAATTCGTTATGGTTATTAAACGTAGGGCCTGAAATAGTTAAGAAATTTTGACCAAATTGTGTCGTGTAAGAAAAAAAAAGGTTCAGAAAATTGAAGCAGACAGCGAACAGTTAATTACATGACAAATTCCACGTTTCACGCATGGCAGGTCTGCTAAGTTTAATAAACAAAGGAGATTTTGGATCAGTATTGAGCAATCAACCCAGAAATTATATCAACTTATTCATGTTTATTTGGTATTCTTATTGTTGAACCTTTAAATGTGGTCAAGGAGCAATTTTAGATCATTGTACTTGATATGGTTGATTTTAGTGGTTGTATAACTGCATTATATACATTCAGGTGCTGATTTCATCTCAATCAGACTTCAAAAGTGATTTTTCTATTTTACACCAAGTACCAGAAGGTCATGTGGGGGTATATTGGAGAGGAGGTGCCCTTCTGAAGACAATAACGGAGCCAGGTTTAAATCTCTCCTTTTTGCCCTAGTTTGTATGGTTTCATACCAATGAAGATAGTATTCCTCACGTATAAACTCATGAACTTCCACTAAATTAACCAATGTGGGACTCACTCCCAATAATCCTCAACAATCCTCTCCTCGAACAAAGTACACTATAAGCCTCCCCCGTGCCCTTCTGAAGACAATAACGGAGCCAGGTTTAAATCTCTCCTTTTTGCCCTAGTTTGTATGGTTTCATACCAATGAAGATAGTATTCCTCACGTATAAACCCATGAACTTCCACTAAATTAACCAATGTGGGACTCACTCCCAATAATCCTCAACAATCCTCTCCTCGCATGAACTTCCACTAAATTAACCAATGTGGGACTCACTCCCAATAATCCTCAACAATCCTCTCCTCGAACAAAGTACACTATAAGCCTCCCCCGTGCCCTTCTGACCCAATAATCCTCAACAATCCTCTCCTCGAACAAAGTACACTATAAGCCTCCCCCGTGCCCTTCTGAAGACAATAACGGAGCCAGGTTTAAATCTCTCCTTTTTGCCCTAGTTTGTATGGTTTCATATCAATAAAGATGGTTTCATACCAGTGAGGAATATATAAACCCATGAACTTCCACTGAATTAACCAATGTGGGACTCACTCCTAATAATCCTCAACAATCCTCTCCTCGAACAAAGTACACTATAAGCCTCCCCCGAGGCTTATGGAGGTCTCGAATAACCTCCCCTTAATCGAGGCTCGACTCATTTCTCTGGAGCCCTCGAACAAAGTACACCCCTTGTTTATTGACATGGTTAAGTTTAGGGCACGACACTCATACCATGTTAGGAATCACGACTCTCCACAATGGTATGATATTGTCCACTTTGAGCATAAGCTCTCATGGCTTTGCTTTGGGCTTCCCCAAAAGGCCTCATACCAATGAAGATAGTATTCCTCTCTTATAAACCCATGAACTTCCACTAAATTAACCAATTTGGGACTCACTCCCAATAATCCTCAACCGTATGTTCTGCTTTTAATCATATTAAAATTTTCAGGTTTCCATCTGAAGTTGCCTCTGTTAACCCAGTTTGTGCCTGTTCAAGTGACCCTCCAGTCTGATCAAGTAAATTAGATTTTTAATGCTGATTTTTTAGGATTTCAACACTTTGTACTAATTGATGCCCGCATGCAGGTAAGGGATATTCCATGTGGTACGAAGGGGGGTGTAATGATCAACTTCGAGAAAATCGAGGTGCGATTACTAGGAAATTCCTTTGCAATAATTGATGTTAGATTTTTTTTGTTCTTCATCTTAGTTGATAAGGATGCTACTTTCAGGTTGTCAATCGCCTCCGCAAAGAATACGTGTATGACACCTTGGTCAACTATGGTGTGAATTATGATAACATATGGATATATGACAAGATTCATCATGAAATCAATCAGTTTTGTAGCTCTCACAGTCTTCAGCAAGTTTATATCGATGTCTTTGATCAGGTACGTAAAAATTATATAAAATGTGTGTTTTGAAAGCCTTGCGATGATTGTTTCTATTTACACAAGCAACTTGCAGAGCTGATAAGAGCAATATGCCAAGCGTGGACTCTAGCTATTAAAGTTTGTCCACTCCAAGTGTTTTGAAAACTTACTACCTCATTTGTAGAGTCATTTACATCAACTATGTTTTCTTTTTTATTCAGCTGTGAATTCTTTCAATGAATCCATTCAAGGCTCTACAAGCTGATGTTTCCATGAAATTTCTCATAGATACTTTCTCCGCTTGCGTTAAGCATTTCTTTAGCATCAATGACCCGTGACTGCTTTTCATGTTCAGATTGACGAGAAGATGAAAGAGGCCCTCCAAGGTGACTGTACGCGTTATGCTCCAGGTATTGAAATAATCAGTGTTCGTGTTACAAAACCTACCATCCCAGATTCCATCAGAAAGAACTTTGAAGACATGGAAGTGGAACGTACAAAGGTGCATCTCTAACATGGAAAAAACAACTTTTTTCTTGTTCTGTTTGAGTTTTCATAGGAGCTACAAGTGACAAAGGCTAGTGTTTGAAATTACGACTTGTGTTAAAGAGCATCGTTGGATTCTCATGGACTCACGTGTCTTTTTAATTCAAAACCGAGTTTACACCGTTAATTCAAAAATATTTAGCTCGAATACCTGTGCAGGTATATTTTAATAAACGTCACACAATTTATTGTGAGATCCCACATTGGTTGGAGAGGAGAACAAAACATTCCTTATAAGGGTGTGGAAACCTCTCCCGGTGGATTTGTGCCGTTACATTTATACATGTCTTAATTCTAATGCTATGCAATCTTGGACATACTTGATAGGTTTTAATTGCCGTAGAAAAACAAATGGTAGTCGAGAAAGAGGCAGAGACCAAGAAGAAAATGGCAATTAGCGAAGCCGAGAAGAATGCTAATGTTAGCATGATCCTCATGGAACAAAAATTGATGGAGAAGGAGAGTGCCAGGAGACAGCAAGAAATTGATAACCACATCTATCTTGCTCGTGAAAAAAGCCTCGCAGATGCCAATTATTACCGGTACTTCTCTCCTCTTGCTTTTCCAATTGGTCACGTCCACTTTTCAAAGTGAGAATCAAAGTGAGAACATGTAATGACATTAACATCGTCCCATCTTTTTATTAGTGTACTAAGAGAAGCTGAAGCCAACCAGTTGAAGCTTACACCCGAGTTTCTGGAGCTTAAATTTATCGAGGCCATTGCTGATAATACAAAGATTTTCTTTGGGGACAAGGCACGTTCTGTCTTCTTGCTCATGATATATGACATACAACATTACTTACGTGTCTATGACTTAACTCGGTAGCTTTGGTTCCGCCAGGTTCCGAACATGGTTTTGGATCAGAGGTTGCTCGGAAACTTCCTGCATCAGGTGTCAGAAGATGTATCAACAAAAGCCTCTGGGGAGACAAGCTTAGAAATGTAGATCCAAGATTCATCCTCTAATGCTCAGCTATTCTGTTCTCTCTCATCTTTCTCAACATTATTTTTGGAAATTGAATAACAATATGAGAGTGGAATATTAGAAACAAATTGTTTTCCTATAAATTTTGTTTA TGAGAAATTCCTTTCTTGCATCAAGTTTTCTTTCGCTCGAAAAACAGTTGGATTCAATCAGCCAAGAGCACAGAACTCCACTCGACGCTGAAAGACCTTCCTGATTTGATTCAGTTGTTGAAGCTGAGATTGCGGCATGGATCATAATCAGCCACAGCGGCCACCATACCCGCAGACTCGTCCTCCAGAATTCGGCGGCAGTTTTTCATCCATACTCGCAGTTTTCGCCGCCTTCATCGCCATCTTTTCCATGGTGCTGATTTCATCTCAATCAGACTTCAAAAGTGATTTTTCTATTTTACACCAAGTACCAGAAGGTCATGTGGGGGTATATTGGAGAGGAGGTGCCCTTCTGAAGACAATAACGGAGCCAGGTTTCCATCTGAAGTTGCCTCTGTTAACCCAGTTTGTGCCTGTTCAAGTGACCCTCCAGTCTGATCAAGTAAGGGATATTCCATGTGGTACGAAGGGGGGTGTAATGATCAACTTCGAGAAAATCGAGGTTGTCAATCGCCTCCGCAAAGAATACGTGTATGACACCTTGGTCAACTATGGTGTGAATTATGATAACATATGGATATATGACAAGATTCATCATGAAATCAATCAGTTTTGTAGCTCTCACAGTCTTCAGCAAGTTTATATCGATGTCTTTGATCAGATTGACGAGAAGATGAAAGAGGCCCTCCAAGGTGACTGTACGCGTTATGCTCCAGGTATTGAAATAATCAGTGTTCGTGTTACAAAACCTACCATCCCAGATTCCATCAGAAAGAACTTTGAAGACATGGAAGTGGAACGTACAAAGGTTTTAATTGCCGTAGAAAAACAAATGGTAGTCGAGAAAGAGGCAGAGACCAAGAAGAAAATGGCAATTAGCGAAGCCGAGAAGAATGCTAATGTTAGCATGATCCTCATGGAACAAAAATTGATGGAGAAGGAGAGTGCCAGGAGACAGCAAGAAATTGATAACCACATCTATCTTGCTCGTGAAAAAAGCCTCGCAGATGCCAATTATTACCGTGTACTAAGAGAAGCTGAAGCCAACCAGTTGAAGCTTACACCCGAGTTTCTGGAGCTTAAATTTATCGAGGCCATTGCTGATAATACAAAGATTTTCTTTGGGGACAAGGTTCCGAACATGGTTTTGGATCAGAGGTTGCTCGGAAACTTCCTGCATCAGGTGTCAGAAGATGTATCAACAAAAGCCTCTGGGGAGACAAGCTTAGAAATGTAGATCCAAGATTCATCCTCTAATGCTCAGCTATTCTGTTCTCTCTCATCTTTCTCAACATTATTTTTGGAAATTGAATAACAATATGAGAGTGGAATATTAGAAACAAATTGTTTTCCTATAAATTTTGTTTA ATGGATCATAATCAGCCACAGCGGCCACCATACCCGCAGACTCGTCCTCCAGAATTCGGCGGCAGTTTTTCATCCATACTCGCAGTTTTCGCCGCCTTCATCGCCATCTTTTCCATGGTGCTGATTTCATCTCAATCAGACTTCAAAAGTGATTTTTCTATTTTACACCAAGTACCAGAAGGTCATGTGGGGGTATATTGGAGAGGAGGTGCCCTTCTGAAGACAATAACGGAGCCAGGTTTCCATCTGAAGTTGCCTCTGTTAACCCAGTTTGTGCCTGTTCAAGTGACCCTCCAGTCTGATCAAGTAAGGGATATTCCATGTGGTACGAAGGGGGGTGTAATGATCAACTTCGAGAAAATCGAGGTTGTCAATCGCCTCCGCAAAGAATACGTGTATGACACCTTGGTCAACTATGGTGTGAATTATGATAACATATGGATATATGACAAGATTCATCATGAAATCAATCAGTTTTGTAGCTCTCACAGTCTTCAGCAAGTTTATATCGATGTCTTTGATCAGATTGACGAGAAGATGAAAGAGGCCCTCCAAGGTGACTGTACGCGTTATGCTCCAGGTATTGAAATAATCAGTGTTCGTGTTACAAAACCTACCATCCCAGATTCCATCAGAAAGAACTTTGAAGACATGGAAGTGGAACGTACAAAGGTTTTAATTGCCGTAGAAAAACAAATGGTAGTCGAGAAAGAGGCAGAGACCAAGAAGAAAATGGCAATTAGCGAAGCCGAGAAGAATGCTAATGTTAGCATGATCCTCATGGAACAAAAATTGATGGAGAAGGAGAGTGCCAGGAGACAGCAAGAAATTGATAACCACATCTATCTTGCTCGTGAAAAAAGCCTCGCAGATGCCAATTATTACCGTGTACTAAGAGAAGCTGAAGCCAACCAGTTGAAGCTTACACCCGAGTTTCTGGAGCTTAAATTTATCGAGGCCATTGCTGATAATACAAAGATTTTCTTTGGGGACAAGGTTCCGAACATGGTTTTGGATCAGAGGTTGCTCGGAAACTTCCTGCATCAGGTGTCAGAAGATGTATCAACAAAAGCCTCTGGGGAGACAAGCTTAGAAATGTAG
BLAST of CmoCh05G004680 vs. Swiss-Prot
Match: ERL2B_XENLA (Erlin-2-B OS=Xenopus laevis GN=erlin2-b PE=2 SV=1) HSP 1 Score: 336.7 bits (862), Expect = 3.3e-91 Identity = 177/314 (56.37%), Postives = 231/314 (73.57%), Query Frame = 1
BLAST of CmoCh05G004680 vs. Swiss-Prot
Match: ERLN2_MOUSE (Erlin-2 OS=Mus musculus GN=Erlin2 PE=1 SV=1) HSP 1 Score: 335.1 bits (858), Expect = 9.6e-91 Identity = 174/317 (54.89%), Postives = 236/317 (74.45%), Query Frame = 1
BLAST of CmoCh05G004680 vs. Swiss-Prot
Match: ERLN2_RAT (Erlin-2 OS=Rattus norvegicus GN=Erlin2 PE=1 SV=1) HSP 1 Score: 334.7 bits (857), Expect = 1.2e-90 Identity = 175/320 (54.69%), Postives = 237/320 (74.06%), Query Frame = 1
BLAST of CmoCh05G004680 vs. Swiss-Prot
Match: ERLN2_BOVIN (Erlin-2 OS=Bos taurus GN=ERLIN2 PE=2 SV=1) HSP 1 Score: 333.6 bits (854), Expect = 2.8e-90 Identity = 169/302 (55.96%), Postives = 230/302 (76.16%), Query Frame = 1
BLAST of CmoCh05G004680 vs. Swiss-Prot
Match: ERLN2_PONAB (Erlin-2 OS=Pongo abelii GN=ERLIN2 PE=2 SV=1) HSP 1 Score: 333.2 bits (853), Expect = 3.6e-90 Identity = 169/302 (55.96%), Postives = 230/302 (76.16%), Query Frame = 1
BLAST of CmoCh05G004680 vs. TrEMBL
Match: A0A0A0KIQ3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G366440 PE=4 SV=1) HSP 1 Score: 617.1 bits (1590), Expect = 1.4e-173 Identity = 312/348 (89.66%), Postives = 329/348 (94.54%), Query Frame = 1
BLAST of CmoCh05G004680 vs. TrEMBL
Match: B9REE7_RICCO (SPFH domain-containing protein 2, putative OS=Ricinus communis GN=RCOM_1620900 PE=4 SV=1) HSP 1 Score: 563.9 bits (1452), Expect = 1.4e-157 Identity = 285/347 (82.13%), Postives = 314/347 (90.49%), Query Frame = 1
BLAST of CmoCh05G004680 vs. TrEMBL
Match: U5G1X9_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0010s16620g PE=4 SV=1) HSP 1 Score: 562.0 bits (1447), Expect = 5.3e-157 Identity = 284/357 (79.55%), Postives = 318/357 (89.08%), Query Frame = 1
BLAST of CmoCh05G004680 vs. TrEMBL
Match: A0A067L268_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_15705 PE=4 SV=1) HSP 1 Score: 562.0 bits (1447), Expect = 5.3e-157 Identity = 286/349 (81.95%), Postives = 314/349 (89.97%), Query Frame = 1
BLAST of CmoCh05G004680 vs. TrEMBL
Match: A0A059D8H1_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_B03154 PE=4 SV=1) HSP 1 Score: 552.0 bits (1421), Expect = 5.5e-154 Identity = 282/343 (82.22%), Postives = 306/343 (89.21%), Query Frame = 1
BLAST of CmoCh05G004680 vs. TAIR10
Match: AT2G03510.1 (AT2G03510.1 SPFH/Band 7/PHB domain-containing membrane-associated protein family) HSP 1 Score: 516.2 bits (1328), Expect = 1.7e-146 Identity = 264/350 (75.43%), Postives = 300/350 (85.71%), Query Frame = 1
BLAST of CmoCh05G004680 vs. NCBI nr
Match: gi|659089346|ref|XP_008445457.1| (PREDICTED: erlin-2-B [Cucumis melo]) HSP 1 Score: 644.0 bits (1660), Expect = 1.5e-181 Identity = 326/366 (89.07%), Postives = 346/366 (94.54%), Query Frame = 1
BLAST of CmoCh05G004680 vs. NCBI nr
Match: gi|778715434|ref|XP_011657401.1| (PREDICTED: erlin-2-B [Cucumis sativus]) HSP 1 Score: 617.1 bits (1590), Expect = 2.0e-173 Identity = 312/348 (89.66%), Postives = 329/348 (94.54%), Query Frame = 1
BLAST of CmoCh05G004680 vs. NCBI nr
Match: gi|255542044|ref|XP_002512086.1| (PREDICTED: erlin-2-B [Ricinus communis]) HSP 1 Score: 563.9 bits (1452), Expect = 2.0e-157 Identity = 285/347 (82.13%), Postives = 314/347 (90.49%), Query Frame = 1
BLAST of CmoCh05G004680 vs. NCBI nr
Match: gi|802568076|ref|XP_012067769.1| (PREDICTED: erlin-2-B [Jatropha curcas]) HSP 1 Score: 562.0 bits (1447), Expect = 7.7e-157 Identity = 286/349 (81.95%), Postives = 314/349 (89.97%), Query Frame = 1
BLAST of CmoCh05G004680 vs. NCBI nr
Match: gi|566191182|ref|XP_006378572.1| (hypothetical protein POPTR_0010s16620g [Populus trichocarpa]) HSP 1 Score: 562.0 bits (1447), Expect = 7.7e-157 Identity = 284/357 (79.55%), Postives = 318/357 (89.08%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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