CmoCh11G014070 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh11G014070
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
Description(Pentatricopeptide repeat-containing protein) (3.4.24.-) (3.6.4.3)
LocationCmo_Chr11 : 9895617 .. 9896645 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAAAGGGCAGGTTTTGTGGCTGAGAGGGACACTTTCAACACTCTAATAAGCGCTTATAGTAGATGTGGTTTGTTCGACCAAGCCATGGCTATCTATCGAAGAATGTTGGATGCTGCGTTTGCTCCCGATCTGCCGATGTACAATACTGTTTTAGCAGCCTTGGCTCGGGGAGGCCTTTGGGAGCAGTCGGAGATAGTGCTCGCCGAAATGAAGAACGGTCGGTGTAAACCTAACGAGTTAACATATTGTTCTTTACTTCATGCTTATGCCAATGGCAAAGATATCCGGCGGATGTCTGCACTTGCTGAGGAAATCCATGCCAGCATTATTGAACCTCAAGCTGTGCTTTTGAAGACATTGGTTTTGGTTTATAGTAAAAGCGATCTTTTGATGGAGACCGAGCGTGCTTTCTTCGAACTTAGGAAGCACGGTTTTTCGCCTGATTTAAGGACTCTAAATGCCATGGTTTCGATCTATGGTAGGAGAAGGATGGTTTTGAAAACCAACGAAATTTTAAACTTCATGAAGGATAGCGGATATACTCCGAGCTTGACTACTTATAATAGCCTAATGTACATGTACAGTCGCTCGGAGAACTTCGACAAGTCGGAGGAGATTTTGAGGGAAATTATTGGGAAAGGAATAAAGCCTGATATCATTTTGTTTAATACCGTTATTTTCGCCTATTGTCGGAATGGTCAAATGAAAGAGGCGTCGAGGATATTTGGTGAAATGAAGGATTTCTGGCTTGTCCCAGATGTAATTACGTATAATACCTTCAATGCAAGCTATGCTGCTGACTCGATGTTTGTAGAGGCGATCGATGTGGTGAGCTATACGATCAAGAATGGATGTAAGCCTAATCCGAACACATACAACTCTCTAGTAGACTCGTTTTGTAAACTAAATCACTGGGAGGATGCAAATAGTTTCGTCTCAAACCTTTGCAATCTCGACCCACACATAACGAAAGAAGAGAAACGCAGGTTGCTGAAGCATATAAGCAAAAAAAAGAAATGGTCATAG

mRNA sequence

ATGAAAAGGGCAGGTTTTGTGGCTGAGAGGGACACTTTCAACACTCTAATAAGCGCTTATAGTAGATGTGGTTTGTTCGACCAAGCCATGGCTATCTATCGAAGAATGTTGGATGCTGCGTTTGCTCCCGATCTGCCGATGTACAATACTGTTTTAGCAGCCTTGGCTCGGGGAGGCCTTTGGGAGCAGTCGGAGATAGTGCTCGCCGAAATGAAGAACGGTCGGTGTAAACCTAACGAGTTAACATATTGTTCTTTACTTCATGCTTATGCCAATGGCAAAGATATCCGGCGGATGTCTGCACTTGCTGAGGAAATCCATGCCAGCATTATTGAACCTCAAGCTGTGCTTTTGAAGACATTGGTTTTGGTTTATAGTAAAAGCGATCTTTTGATGGAGACCGAGCGTGCTTTCTTCGAACTTAGGAAGCACGGTTTTTCGCCTGATTTAAGGACTCTAAATGCCATGGTTTCGATCTATGGTAGGAGAAGGATGGTTTTGAAAACCAACGAAATTTTAAACTTCATGAAGGATAGCGGATATACTCCGAGCTTGACTACTTATAATAGCCTAATGTACATGTACAGTCGCTCGGAGAACTTCGACAAGTCGGAGGAGATTTTGAGGGAAATTATTGGGAAAGGAATAAAGCCTGATATCATTTTGTTTAATACCGTTATTTTCGCCTATTGTCGGAATGGTCAAATGAAAGAGGCGTCGAGGATATTTGGTGAAATGAAGGATTTCTGGCTTGTCCCAGATGTAATTACGTATAATACCTTCAATGCAAGCTATGCTGCTGACTCGATGTTTGTAGAGGCGATCGATGTGGTGAGCTATACGATCAAGAATGGATGTAAGCCTAATCCGAACACATACAACTCTCTAGTAGACTCGTTTTGTAAACTAAATCACTGGGAGGATGCAAATAGTTTCGTCTCAAACCTTTGCAATCTCGACCCACACATAACGAAAGAAGAGAAACGCAGGTTGCTGAAGCATATAAGCAAAAAAAAGAAATGGTCATAG

Coding sequence (CDS)

ATGAAAAGGGCAGGTTTTGTGGCTGAGAGGGACACTTTCAACACTCTAATAAGCGCTTATAGTAGATGTGGTTTGTTCGACCAAGCCATGGCTATCTATCGAAGAATGTTGGATGCTGCGTTTGCTCCCGATCTGCCGATGTACAATACTGTTTTAGCAGCCTTGGCTCGGGGAGGCCTTTGGGAGCAGTCGGAGATAGTGCTCGCCGAAATGAAGAACGGTCGGTGTAAACCTAACGAGTTAACATATTGTTCTTTACTTCATGCTTATGCCAATGGCAAAGATATCCGGCGGATGTCTGCACTTGCTGAGGAAATCCATGCCAGCATTATTGAACCTCAAGCTGTGCTTTTGAAGACATTGGTTTTGGTTTATAGTAAAAGCGATCTTTTGATGGAGACCGAGCGTGCTTTCTTCGAACTTAGGAAGCACGGTTTTTCGCCTGATTTAAGGACTCTAAATGCCATGGTTTCGATCTATGGTAGGAGAAGGATGGTTTTGAAAACCAACGAAATTTTAAACTTCATGAAGGATAGCGGATATACTCCGAGCTTGACTACTTATAATAGCCTAATGTACATGTACAGTCGCTCGGAGAACTTCGACAAGTCGGAGGAGATTTTGAGGGAAATTATTGGGAAAGGAATAAAGCCTGATATCATTTTGTTTAATACCGTTATTTTCGCCTATTGTCGGAATGGTCAAATGAAAGAGGCGTCGAGGATATTTGGTGAAATGAAGGATTTCTGGCTTGTCCCAGATGTAATTACGTATAATACCTTCAATGCAAGCTATGCTGCTGACTCGATGTTTGTAGAGGCGATCGATGTGGTGAGCTATACGATCAAGAATGGATGTAAGCCTAATCCGAACACATACAACTCTCTAGTAGACTCGTTTTGTAAACTAAATCACTGGGAGGATGCAAATAGTTTCGTCTCAAACCTTTGCAATCTCGACCCACACATAACGAAAGAAGAGAAACGCAGGTTGCTGAAGCATATAAGCAAAAAAAAGAAATGGTCATAG
Homology
[Close]
BLAST of CmoCh11G014070 vs. Swiss-Prot
Match: PP362_ARATH (Pentatricopeptide repeat-containing protein At5g02860 OS=Arabidopsis thaliana GN=At5g02860 PE=2 SV=1)

HSP 1 Score: 488.4 bits (1256), Expect = 6.3e-137
Identity = 241/338 (71.30%), Postives = 284/338 (84.02%), Query Frame = 1 

Query: 1   MKRAGFVAERDTFNTLISAYSRCGLFDQAMAIYRRMLDAAFAPDLPMYNTVLAALARGGL 60
           MKRAGFV ER+TFNTLISAYSRCG F+QAM +YRRMLDA   PDL  YNTVLAALARGG+
Sbjct: 480 MKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGM 539

Query: 61  WEQSEIVLAEMKNGRCKPNELTYCSLLHAYANGKDIRRMSALAEEIHASIIEPQAVLLKT 120
           WEQSE VLAEM++GRCKPNELTYCSLLHAYANGK+I  M +LAEE+++ +IEP+AVLLKT
Sbjct: 540 WEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKT 599

Query: 121 LVLVYSKSDLLMETERAFFELRKHGFSPDLRTLNAMVSIYGRRRMVLKTNEILNFMKDSG 180
           LVLV SK DLL E ERAF EL++ GFSPD+ TLN+MVSIYGRR+MV K N +L++MK+ G
Sbjct: 600 LVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERG 659

Query: 181 YTPSLTTYNSLMYMYSRSENFDKSEEILREIIGKGIKPDIILFNTVIFAYCRNGQMKEAS 240
           +TPS+ TYNSLMYM+SRS +F KSEEILREI+ KGIKPDII +NTVI+AYCRN +M++AS
Sbjct: 660 FTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDAS 719

Query: 241 RIFGEMKDFWLVPDVITYNTFNASYAADSMFVEAIDVVSYTIKNGCKPNPNTYNSLVDSF 300
           RIF EM++  +VPDVITYNTF  SYAADSMF EAI VV Y IK+GC+PN NTYNS+VD +
Sbjct: 720 RIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGY 779

Query: 301 CKLNHWEDANSFVSNLCNLDPHITKEEKRRLLKHISKK 339
           CKLN  ++A  FV +L NLDPH  K E  RLL+ I KK
Sbjct: 780 CKLNRKDEAKLFVEDLRNLDPHAPKGEDLRLLERIVKK 817

[Close]
BLAST of CmoCh11G014070 vs. Swiss-Prot
Match: PP163_ARATH (Pentatricopeptide repeat-containing protein At2g18940, chloroplastic OS=Arabidopsis thaliana GN=At2g18940 PE=2 SV=1)

HSP 1 Score: 248.4 bits (633), Expect = 1.1e-64
Identity = 134/331 (40.48%), Postives = 187/331 (56.50%), Query Frame = 1 

Query: 1   MKRAGFVAERDTFNTLISAYSRCGLFDQAMAIYRRMLDAAFAPDLPMYNTVLAALARGGL 60
           MK  GF  +RDTFNTLISAY RCG    A  +Y  M  A F   +  YN +L ALAR G 
Sbjct: 482 MKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGD 541

Query: 61  WEQSEIVLAEMKNGRCKPNELTYCSLLHAYANGKDIRRMSALAEEIHASIIEPQAVLLKT 120
           W   E V+++MK+   KP E +Y  +L  YA G +   +  +   I    I P  +LL+T
Sbjct: 542 WRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIENRIKEGQIFPSWMLLRT 601

Query: 121 LVLVYSKSDLLMETERAFFELRKHGFSPDLRTLNAMVSIYGRRRMVLKTNEILNFMKDSG 180
           L+L   K   L  +ERAF   +KHG+ PD+   N+M+SI+ R  M  +   IL  +++ G
Sbjct: 602 LLLANFKCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDG 661

Query: 181 YTPSLTTYNSLMYMYSRSENFDKSEEILREIIGKGIKPDIILFNTVIFAYCRNGQMKEAS 240
            +P L TYNSLM MY R     K+EEIL+ +    +KPD++ +NTVI  +CR G M+EA 
Sbjct: 662 LSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAV 721

Query: 241 RIFGEMKDFWLVPDVITYNTFNASYAADSMFVEAIDVVSYTIKNGCKPNPNTYNSLVDSF 300
           R+  EM +  + P + TYNTF + Y A  MF E  DV+    KN C+PN  T+  +VD +
Sbjct: 722 RMLSEMTERGIRPCIFTYNTFVSGYTAMGMFAEIEDVIECMAKNDCRPNELTFKMVVDGY 781

Query: 301 CKLNHWEDANSFVSNLCNLDPHITKEEKRRL 332
           C+   + +A  FVS +   DP    +  +RL
Sbjct: 782 CRAGKYSEAMDFVSKIKTFDPCFDDQSIQRL 812

[Close]
BLAST of CmoCh11G014070 vs. Swiss-Prot
Match: RF1_ORYSI (Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica GN=Rf1 PE=2 SV=1)

HSP 1 Score: 146.7 bits (369), Expect = 4.5e-34
Identity = 82/309 (26.54%), Postives = 155/309 (50.16%), Query Frame = 1 

Query: 1   MKRAGFVAERDTFNTLISAYSRCGLFDQAMAIYRRMLDAAFAPDLPMYNTVLAALARGGL 60
           M + G + +  T+N+++  Y   G   +A+   ++M      PD+  Y+ ++  L + G 
Sbjct: 257 MVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGR 316

Query: 61  WEQSEIVLAEMKNGRCKPNELTYCSLLHAYANGKDIRRMSALAEEIHASIIEPQAVLLKT 120
             ++  +   M     KP   TY +LL  YA    +  M  L + +  + I P   +   
Sbjct: 317 CMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSI 376

Query: 121 LVLVYSKSDLLMETERAFFELRKHGFSPDLRTLNAMVSIYGRRRMVLKTNEILNFMKDSG 180
           L+  Y+K   + +    F ++R+ G +P+  T  A++ I  +   V         M D G
Sbjct: 377 LICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEG 436

Query: 181 YTPSLTTYNSLMYMYSRSENFDKSEEILREIIGKGIKPDIILFNTVIFAYCRNGQMKEAS 240
            +P    YNSL++       ++++EE++ E++ +GI  + I FN++I ++C+ G++ E+ 
Sbjct: 437 LSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESE 496

Query: 241 RIFGEMKDFWLVPDVITYNTFNASYAADSMFVEAIDVVSYTIKNGCKPNPNTYNSLVDSF 300
           ++F  M    + P+VITYNT    Y       EA+ ++S  +  G KPN  TY++L++ +
Sbjct: 497 KLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGY 556

Query: 301 CKLNHWEDA 310
           CK++  EDA
Sbjct: 557 CKISRMEDA 565

[Close]
BLAST of CmoCh11G014070 vs. Swiss-Prot
Match: PP178_ARATH (Pentatricopeptide repeat-containing protein At2g31400, chloroplastic OS=Arabidopsis thaliana GN=At2g31400 PE=2 SV=1)

HSP 1 Score: 139.0 bits (349), Expect = 9.4e-32
Identity = 84/301 (27.91%), Postives = 146/301 (48.50%), Query Frame = 1 

Query: 1   MKRAGFVAERDTFNTLISAYSRCGL-FDQAMAIYRRMLDAAFAPDLPMYNTVLAALARGG 60
           MK  G      T+N +I A  + G+ F Q    +  M      PD   +N++LA  +RGG
Sbjct: 294 MKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGG 353

Query: 61  LWEQSEIVLAEMKNGRCKPNELTYCSLLHAYANGKDIRRMSALAEEIHASIIEPQAVLLK 120
           LWE +  +  EM N R + +  +Y +LL A   G  +     +  ++    I P  V   
Sbjct: 354 LWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYS 413

Query: 121 TLVLVYSKSDLLMETERAFFELRKHGFSPDLRTLNAMVSIYGRRRMVLKTNEILNFMKDS 180
           T++  ++K+    E    F E+R  G + D  + N ++SIY +     +  +IL  M   
Sbjct: 414 TVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASV 473

Query: 181 GYTPSLTTYNSLMYMYSRSENFDKSEEILREIIGKGIKPDIILFNTVIFAYCRNGQMKEA 240
           G    + TYN+L+  Y +   +D+ +++  E+  + + P+++ ++T+I  Y + G  KEA
Sbjct: 474 GIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEA 533

Query: 241 SRIFGEMKDFWLVPDVITYNTFNASYAADSMFVEAIDVVSYTIKNGCKPNPNTYNSLVDS 300
             IF E K   L  DV+ Y+    +   + +   A+ ++    K G  PN  TYNS++D+
Sbjct: 534 MEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDA 593

[Close]
BLAST of CmoCh11G014070 vs. Swiss-Prot
Match: PP407_ARATH (Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana GN=EMB2745 PE=2 SV=1)

HSP 1 Score: 138.7 bits (348), Expect = 1.2e-31
Identity = 78/309 (25.24%), Postives = 148/309 (47.90%), Query Frame = 1 

Query: 1   MKRAGFVAERDTFNTLISAYSRCGLFDQAMAIYRRMLDAAFAPDLPMYNTVLAALARGGL 60
           M+  G +    T+NTLI  Y +    D    + R M      P+L  YN V+  L R G 
Sbjct: 231 METKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGR 290

Query: 61  WEQSEIVLAEMKNGRCKPNELTYCSLLHAYANGKDIRRMSALAEEIHASIIEPQAVLLKT 120
            ++   VL EM       +E+TY +L+  Y    +  +   +  E+    + P  +   +
Sbjct: 291 MKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTS 350

Query: 121 LVLVYSKSDLLMETERAFFELRKHGFSPDLRTLNAMVSIYGRRRMVLKTNEILNFMKDSG 180
           L+    K+  +        ++R  G  P+ RT   +V  + ++  + +   +L  M D+G
Sbjct: 351 LIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNG 410

Query: 181 YTPSLTTYNSLMYMYSRSENFDKSEEILREIIGKGIKPDIILFNTVIFAYCRNGQMKEAS 240
           ++PS+ TYN+L+  +  +   + +  +L ++  KG+ PD++ ++TV+  +CR+  + EA 
Sbjct: 411 FSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEAL 470

Query: 241 RIFGEMKDFWLVPDVITYNTFNASYAADSMFVEAIDVVSYTIKNGCKPNPNTYNSLVDSF 300
           R+  EM +  + PD ITY++    +       EA D+    ++ G  P+  TY +L++++
Sbjct: 471 RVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAY 530

Query: 301 CKLNHWEDA 310
           C     E A
Sbjct: 531 CMEGDLEKA 539

[Close]
BLAST of CmoCh11G014070 vs. TrEMBL
Match: A0A0A0K4H7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G071530 PE=4 SV=1)

HSP 1 Score: 565.1 bits (1455), Expect = 5.9e-158
Identity = 281/342 (82.16%), Postives = 309/342 (90.35%), Query Frame = 1 

Query: 1   MKRAGFVAERDTFNTLISAYSRCGLFDQAMAIYRRMLDAAFAPDLPMYNTVLAALARGGL 60
           MKRAGFV ERDTFNTLISAYSRCG FDQAMAIYRRMLDA   PDL  YN VLAALARGGL
Sbjct: 492 MKRAGFVPERDTFNTLISAYSRCGFFDQAMAIYRRMLDAGVTPDLSTYNAVLAALARGGL 551

Query: 61  WEQSEIVLAEMKNGRCKPNELTYCSLLHAYANGKDIRRMSALAEEIHASIIEPQAVLLKT 120
           WEQSE VLAEMK+GRCKPNELTYCSLLHAYANGK++ RMSALAEEI++ IIEPQAVLLKT
Sbjct: 552 WEQSEKVLAEMKDGRCKPNELTYCSLLHAYANGKEVERMSALAEEIYSGIIEPQAVLLKT 611

Query: 121 LVLVYSKSDLLMETERAFFELRKHGFSPDLRTLNAMVSIYGRRRMVLKTNEILNFMKDSG 180
           LVLVYSKSDLL ETERAF ELR+ GFSPD+ TLNAMVSIYGRRRMV KTNEILNF+KDSG
Sbjct: 612 LVLVYSKSDLLTETERAFLELREQGFSPDITTLNAMVSIYGRRRMVSKTNEILNFIKDSG 671

Query: 181 YTPSLTTYNSLMYMYSRSENFDKSEEILREIIGKGIKPDIILFNTVIFAYCRNGQMKEAS 240
           +TPSLTTYNSLMYMYSR+E+F+KSE+ILREII KG+KPDII FNTVIFAYCRNG+MKEAS
Sbjct: 672 FTPSLTTYNSLMYMYSRTEHFEKSEDILREIIAKGMKPDIISFNTVIFAYCRNGRMKEAS 731

Query: 241 RIFGEMKDFWLVPDVITYNTFNASYAADSMFVEAIDVVSYTIKNGCKPNPNTYNSLVDSF 300
           RIF EMKDF L PDVITYNTF ASYA+DSMF+EAIDVV Y IKNGCKPN NTYNSL+D F
Sbjct: 732 RIFAEMKDFGLAPDVITYNTFIASYASDSMFIEAIDVVKYMIKNGCKPNQNTYNSLIDWF 791

Query: 301 CKLNHWEDANSFVSNLCNLDPHITKEEKRRLLKHISKKKKWS 343
           CKLN  ++A+SF+SNL NLDP +TK+E+RRLL+ ++  KKWS
Sbjct: 792 CKLNRRDEASSFISNLRNLDPSVTKDEERRLLERLN--KKWS 831

[Close]
BLAST of CmoCh11G014070 vs. TrEMBL
Match: A0A061E043_THECC (Pentatricopeptide repeat-containing protein, putative isoform 1 OS=Theobroma cacao GN=TCM_007183 PE=4 SV=1)

HSP 1 Score: 522.3 bits (1344), Expect = 4.4e-145
Identity = 259/342 (75.73%), Postives = 298/342 (87.13%), Query Frame = 1 

Query: 1   MKRAGFVAERDTFNTLISAYSRCGLFDQAMAIYRRMLDAAFAPDLPMYNTVLAALARGGL 60
           MKRAGFV ERDTFNTLISAYSRCG FDQAM++Y+RML+A   PDL  YN VLAALARGGL
Sbjct: 479 MKRAGFVPERDTFNTLISAYSRCGSFDQAMSVYKRMLEAGVTPDLSTYNAVLAALARGGL 538

Query: 61  WEQSEIVLAEMKNGRCKPNELTYCSLLHAYANGKDIRRMSALAEEIHASIIEPQAVLLKT 120
           W+QSE +LAEMK+GRCKPNELTYCSLLH YANGK + RM ALAEEI++ IIEP AVLLKT
Sbjct: 539 WKQSEKILAEMKDGRCKPNELTYCSLLHVYANGKQVDRMHALAEEIYSGIIEPHAVLLKT 598

Query: 121 LVLVYSKSDLLMETERAFFELRKHGFSPDLRTLNAMVSIYGRRRMVLKTNEILNFMKDSG 180
           LVLV SK DLL+ETERAF ELRK GFSPD+ TLNAMVSIYGRR+MV KTNEIL FM +SG
Sbjct: 599 LVLVNSKCDLLVETERAFSELRKKGFSPDITTLNAMVSIYGRRQMVSKTNEILTFMNESG 658

Query: 181 YTPSLTTYNSLMYMYSRSENFDKSEEILREIIGKGIKPDIILFNTVIFAYCRNGQMKEAS 240
           +TPSLTTYNSLMYMYSRSENF++SE++LRE++ KGIKPDII +NTVI+AYCRNG+MKEAS
Sbjct: 659 FTPSLTTYNSLMYMYSRSENFEESEKVLREVLAKGIKPDIISYNTVIYAYCRNGRMKEAS 718

Query: 241 RIFGEMKDFWLVPDVITYNTFNASYAADSMFVEAIDVVSYTIKNGCKPNPNTYNSLVDSF 300
           RIF EM +  L+PDVITYNTF ASYAAD+MF EAIDVV Y IK+GCKPN NTYNS+VD +
Sbjct: 719 RIFSEMGNSGLMPDVITYNTFVASYAADTMFEEAIDVVRYMIKHGCKPNQNTYNSIVDGY 778

Query: 301 CKLNHWEDANSFVSNLCNLDPHITKEEKRRLLKHISKKKKWS 343
           CKLNH ++A++FV+NL  LDPHI+KEE+ RL + I   +KWS
Sbjct: 779 CKLNHQDEASTFVNNLQKLDPHISKEEEIRLSERI--VEKWS 818

[Close]
BLAST of CmoCh11G014070 vs. TrEMBL
Match: V4RNZ1_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10030402mg PE=4 SV=1)

HSP 1 Score: 519.2 bits (1336), Expect = 3.7e-144
Identity = 254/338 (75.15%), Postives = 294/338 (86.98%), Query Frame = 1 

Query: 1   MKRAGFVAERDTFNTLISAYSRCGLFDQAMAIYRRMLDAAFAPDLPMYNTVLAALARGGL 60
           MKRAGF+ ERDTFNTLISAYSRCG FDQAM+IY+RML+A   PDL  YN VLAALARGG+
Sbjct: 480 MKRAGFIPERDTFNTLISAYSRCGSFDQAMSIYKRMLEAGVTPDLSTYNAVLAALARGGM 539

Query: 61  WEQSEIVLAEMKNGRCKPNELTYCSLLHAYANGKDIRRMSALAEEIHASIIEPQAVLLKT 120
           WEQSE + AEMK GRCKPNELTY SLLHAYANG++I +M AL+EEI++ IIEP AVLLKT
Sbjct: 540 WEQSEKIFAEMKGGRCKPNELTYSSLLHAYANGREIDQMLALSEEIYSGIIEPHAVLLKT 599

Query: 121 LVLVYSKSDLLMETERAFFELRKHGFSPDLRTLNAMVSIYGRRRMVLKTNEILNFMKDSG 180
           L+LVYSKSDLLM+TERAF EL+K GFSPD+ TLNAM+SIYGRR+MV KTNEIL+FM DSG
Sbjct: 600 LILVYSKSDLLMDTERAFLELKKKGFSPDIPTLNAMISIYGRRQMVAKTNEILHFMNDSG 659

Query: 181 YTPSLTTYNSLMYMYSRSENFDKSEEILREIIGKGIKPDIILFNTVIFAYCRNGQMKEAS 240
           +TPSLTTYN+LMYMYSRSENF ++E++LREI+ KGIKPDII +NTVIFAYCRNG+MKEAS
Sbjct: 660 FTPSLTTYNTLMYMYSRSENFARAEDVLREILAKGIKPDIISYNTVIFAYCRNGRMKEAS 719

Query: 241 RIFGEMKDFWLVPDVITYNTFNASYAADSMFVEAIDVVSYTIKNGCKPNPNTYNSLVDSF 300
           RIF EM+D  LVPDVITYNTF ASYAADS+FVEA+DVV Y IK GCKPN NTYNS+VD +
Sbjct: 720 RIFSEMRDSGLVPDVITYNTFVASYAADSLFVEALDVVRYMIKQGCKPNQNTYNSIVDGY 779

Query: 301 CKLNHWEDANSFVSNLCNLDPHITKEEKRRLLKHISKK 339
           CKLN   +A +FV+NL  LDPH+TKE + +L   I+KK
Sbjct: 780 CKLNQRYEAITFVNNLSKLDPHVTKELECKLSDRIAKK 817

[Close]
BLAST of CmoCh11G014070 vs. TrEMBL
Match: A0A067EVB9_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g003451mg PE=4 SV=1)

HSP 1 Score: 519.2 bits (1336), Expect = 3.7e-144
Identity = 254/338 (75.15%), Postives = 294/338 (86.98%), Query Frame = 1 

Query: 1   MKRAGFVAERDTFNTLISAYSRCGLFDQAMAIYRRMLDAAFAPDLPMYNTVLAALARGGL 60
           MKRAGF+ ERDTFNTLISAYSRCG FDQAM+IY+RML+A   PDL  YN VLAALARGG+
Sbjct: 480 MKRAGFIPERDTFNTLISAYSRCGSFDQAMSIYKRMLEAGVTPDLSTYNAVLAALARGGM 539

Query: 61  WEQSEIVLAEMKNGRCKPNELTYCSLLHAYANGKDIRRMSALAEEIHASIIEPQAVLLKT 120
           WEQSE + AEMK GRCKPNELTY SLLHAYANG++I +M AL+EEI++ IIEP AVLLKT
Sbjct: 540 WEQSEKIFAEMKGGRCKPNELTYSSLLHAYANGREIDQMLALSEEIYSGIIEPHAVLLKT 599

Query: 121 LVLVYSKSDLLMETERAFFELRKHGFSPDLRTLNAMVSIYGRRRMVLKTNEILNFMKDSG 180
           L+LVYSKSDLLM+TERAF EL+K GFSPD+ TLNAM+SIYGRR+MV KTNEIL+FM DSG
Sbjct: 600 LILVYSKSDLLMDTERAFLELKKKGFSPDIPTLNAMISIYGRRQMVAKTNEILHFMNDSG 659

Query: 181 YTPSLTTYNSLMYMYSRSENFDKSEEILREIIGKGIKPDIILFNTVIFAYCRNGQMKEAS 240
           +TPSLTTYN+LMYMYSRSENF ++E++LREI+ KGIKPDII +NTVIFAYCRNG+MKEAS
Sbjct: 660 FTPSLTTYNTLMYMYSRSENFARAEDVLREILAKGIKPDIISYNTVIFAYCRNGRMKEAS 719

Query: 241 RIFGEMKDFWLVPDVITYNTFNASYAADSMFVEAIDVVSYTIKNGCKPNPNTYNSLVDSF 300
           RIF EM+D  LVPDVITYNTF ASYAADS+FVEA+DVV Y IK GCKPN NTYNS+VD +
Sbjct: 720 RIFSEMRDSGLVPDVITYNTFVASYAADSLFVEALDVVRYMIKQGCKPNQNTYNSIVDGY 779

Query: 301 CKLNHWEDANSFVSNLCNLDPHITKEEKRRLLKHISKK 339
           CKLN   +A +FV+NL  LDPH+TKE + +L   I+KK
Sbjct: 780 CKLNQRYEAITFVNNLSKLDPHVTKELECKLSDRIAKK 817

[Close]
BLAST of CmoCh11G014070 vs. TrEMBL
Match: A0A059AN63_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_I01083 PE=4 SV=1)

HSP 1 Score: 514.2 bits (1323), Expect = 1.2e-142
Identity = 251/338 (74.26%), Postives = 294/338 (86.98%), Query Frame = 1 

Query: 1   MKRAGFVAERDTFNTLISAYSRCGLFDQAMAIYRRMLDAAFAPDLPMYNTVLAALARGGL 60
           MKRAGFV ERDTFNTLIS+YSRCG FDQAMA+Y+RML+A   PDL  YN VLAALARGGL
Sbjct: 487 MKRAGFVPERDTFNTLISSYSRCGSFDQAMAVYKRMLEAGVNPDLSTYNAVLAALARGGL 546

Query: 61  WEQSEIVLAEMKNGRCKPNELTYCSLLHAYANGKDIRRMSALAEEIHASIIEPQAVLLKT 120
           WEQSE V  EMK+G CKPNELTYCSLLHAYANGK I +M  LAEEI +  IEP+AVLLKT
Sbjct: 547 WEQSERVFEEMKSGCCKPNELTYCSLLHAYANGKQIEQMGILAEEIFSGAIEPRAVLLKT 606

Query: 121 LVLVYSKSDLLMETERAFFELRKHGFSPDLRTLNAMVSIYGRRRMVLKTNEILNFMKDSG 180
           L+LV SK DL++ETERA  EL+K GFSPD+ TLNAMVSIYGRR+MV KTNEILN+M++SG
Sbjct: 607 LILVNSKCDLIVETERALLELKKRGFSPDIPTLNAMVSIYGRRQMVAKTNEILNYMEESG 666

Query: 181 YTPSLTTYNSLMYMYSRSENFDKSEEILREIIGKGIKPDIILFNTVIFAYCRNGQMKEAS 240
           +TPSLTTYNSLMYMYSRS+NF+KSEE+LREI+ KGIKPDII FNTVIFAYCRNG+M+EAS
Sbjct: 667 FTPSLTTYNSLMYMYSRSQNFEKSEELLREILAKGIKPDIISFNTVIFAYCRNGRMREAS 726

Query: 241 RIFGEMKDFWLVPDVITYNTFNASYAADSMFVEAIDVVSYTIKNGCKPNPNTYNSLVDSF 300
           RIF E+KDF L PDVITYNTF +SYAADSMFVEAIDVV Y IK+GC+PN NTYNS++D +
Sbjct: 727 RIFSELKDFGLDPDVITYNTFISSYAADSMFVEAIDVVRYMIKHGCRPNQNTYNSIIDGY 786

Query: 301 CKLNHWEDANSFVSNLCNLDPHITKEEKRRLLKHISKK 339
           CKL+  E+A+ F++NL  LDPHI+K+ ++RL + I++K
Sbjct: 787 CKLHRREEASMFITNLRTLDPHISKDVEQRLSERITRK 824

[Close]
BLAST of CmoCh11G014070 vs. TAIR10
Match: AT5G02860.1 (AT5G02860.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 488.4 bits (1256), Expect = 3.6e-138
Identity = 241/338 (71.30%), Postives = 284/338 (84.02%), Query Frame = 1 

Query: 1   MKRAGFVAERDTFNTLISAYSRCGLFDQAMAIYRRMLDAAFAPDLPMYNTVLAALARGGL 60
           MKRAGFV ER+TFNTLISAYSRCG F+QAM +YRRMLDA   PDL  YNTVLAALARGG+
Sbjct: 480 MKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGM 539

Query: 61  WEQSEIVLAEMKNGRCKPNELTYCSLLHAYANGKDIRRMSALAEEIHASIIEPQAVLLKT 120
           WEQSE VLAEM++GRCKPNELTYCSLLHAYANGK+I  M +LAEE+++ +IEP+AVLLKT
Sbjct: 540 WEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKT 599

Query: 121 LVLVYSKSDLLMETERAFFELRKHGFSPDLRTLNAMVSIYGRRRMVLKTNEILNFMKDSG 180
           LVLV SK DLL E ERAF EL++ GFSPD+ TLN+MVSIYGRR+MV K N +L++MK+ G
Sbjct: 600 LVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERG 659

Query: 181 YTPSLTTYNSLMYMYSRSENFDKSEEILREIIGKGIKPDIILFNTVIFAYCRNGQMKEAS 240
           +TPS+ TYNSLMYM+SRS +F KSEEILREI+ KGIKPDII +NTVI+AYCRN +M++AS
Sbjct: 660 FTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDAS 719

Query: 241 RIFGEMKDFWLVPDVITYNTFNASYAADSMFVEAIDVVSYTIKNGCKPNPNTYNSLVDSF 300
           RIF EM++  +VPDVITYNTF  SYAADSMF EAI VV Y IK+GC+PN NTYNS+VD +
Sbjct: 720 RIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGY 779

Query: 301 CKLNHWEDANSFVSNLCNLDPHITKEEKRRLLKHISKK 339
           CKLN  ++A  FV +L NLDPH  K E  RLL+ I KK
Sbjct: 780 CKLNRKDEAKLFVEDLRNLDPHAPKGEDLRLLERIVKK 817

[Close]
BLAST of CmoCh11G014070 vs. TAIR10
Match: AT2G18940.1 (AT2G18940.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 248.4 bits (633), Expect = 6.2e-66
Identity = 134/331 (40.48%), Postives = 187/331 (56.50%), Query Frame = 1 

Query: 1   MKRAGFVAERDTFNTLISAYSRCGLFDQAMAIYRRMLDAAFAPDLPMYNTVLAALARGGL 60
           MK  GF  +RDTFNTLISAY RCG    A  +Y  M  A F   +  YN +L ALAR G 
Sbjct: 482 MKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGD 541

Query: 61  WEQSEIVLAEMKNGRCKPNELTYCSLLHAYANGKDIRRMSALAEEIHASIIEPQAVLLKT 120
           W   E V+++MK+   KP E +Y  +L  YA G +   +  +   I    I P  +LL+T
Sbjct: 542 WRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIENRIKEGQIFPSWMLLRT 601

Query: 121 LVLVYSKSDLLMETERAFFELRKHGFSPDLRTLNAMVSIYGRRRMVLKTNEILNFMKDSG 180
           L+L   K   L  +ERAF   +KHG+ PD+   N+M+SI+ R  M  +   IL  +++ G
Sbjct: 602 LLLANFKCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDG 661

Query: 181 YTPSLTTYNSLMYMYSRSENFDKSEEILREIIGKGIKPDIILFNTVIFAYCRNGQMKEAS 240
            +P L TYNSLM MY R     K+EEIL+ +    +KPD++ +NTVI  +CR G M+EA 
Sbjct: 662 LSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAV 721

Query: 241 RIFGEMKDFWLVPDVITYNTFNASYAADSMFVEAIDVVSYTIKNGCKPNPNTYNSLVDSF 300
           R+  EM +  + P + TYNTF + Y A  MF E  DV+    KN C+PN  T+  +VD +
Sbjct: 722 RMLSEMTERGIRPCIFTYNTFVSGYTAMGMFAEIEDVIECMAKNDCRPNELTFKMVVDGY 781

Query: 301 CKLNHWEDANSFVSNLCNLDPHITKEEKRRL 332
           C+   + +A  FVS +   DP    +  +RL
Sbjct: 782 CRAGKYSEAMDFVSKIKTFDPCFDDQSIQRL 812

[Close]
BLAST of CmoCh11G014070 vs. TAIR10
Match: AT2G31400.1 (AT2G31400.1 genomes uncoupled 1)

HSP 1 Score: 139.0 bits (349), Expect = 5.3e-33
Identity = 84/301 (27.91%), Postives = 146/301 (48.50%), Query Frame = 1 

Query: 1   MKRAGFVAERDTFNTLISAYSRCGL-FDQAMAIYRRMLDAAFAPDLPMYNTVLAALARGG 60
           MK  G      T+N +I A  + G+ F Q    +  M      PD   +N++LA  +RGG
Sbjct: 294 MKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGG 353

Query: 61  LWEQSEIVLAEMKNGRCKPNELTYCSLLHAYANGKDIRRMSALAEEIHASIIEPQAVLLK 120
           LWE +  +  EM N R + +  +Y +LL A   G  +     +  ++    I P  V   
Sbjct: 354 LWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYS 413

Query: 121 TLVLVYSKSDLLMETERAFFELRKHGFSPDLRTLNAMVSIYGRRRMVLKTNEILNFMKDS 180
           T++  ++K+    E    F E+R  G + D  + N ++SIY +     +  +IL  M   
Sbjct: 414 TVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASV 473

Query: 181 GYTPSLTTYNSLMYMYSRSENFDKSEEILREIIGKGIKPDIILFNTVIFAYCRNGQMKEA 240
           G    + TYN+L+  Y +   +D+ +++  E+  + + P+++ ++T+I  Y + G  KEA
Sbjct: 474 GIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEA 533

Query: 241 SRIFGEMKDFWLVPDVITYNTFNASYAADSMFVEAIDVVSYTIKNGCKPNPNTYNSLVDS 300
             IF E K   L  DV+ Y+    +   + +   A+ ++    K G  PN  TYNS++D+
Sbjct: 534 MEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDA 593

[Close]
BLAST of CmoCh11G014070 vs. TAIR10
Match: AT5G39710.1 (AT5G39710.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 138.7 bits (348), Expect = 6.9e-33
Identity = 78/309 (25.24%), Postives = 148/309 (47.90%), Query Frame = 1 

Query: 1   MKRAGFVAERDTFNTLISAYSRCGLFDQAMAIYRRMLDAAFAPDLPMYNTVLAALARGGL 60
           M+  G +    T+NTLI  Y +    D    + R M      P+L  YN V+  L R G 
Sbjct: 231 METKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGR 290

Query: 61  WEQSEIVLAEMKNGRCKPNELTYCSLLHAYANGKDIRRMSALAEEIHASIIEPQAVLLKT 120
            ++   VL EM       +E+TY +L+  Y    +  +   +  E+    + P  +   +
Sbjct: 291 MKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTS 350

Query: 121 LVLVYSKSDLLMETERAFFELRKHGFSPDLRTLNAMVSIYGRRRMVLKTNEILNFMKDSG 180
           L+    K+  +        ++R  G  P+ RT   +V  + ++  + +   +L  M D+G
Sbjct: 351 LIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNG 410

Query: 181 YTPSLTTYNSLMYMYSRSENFDKSEEILREIIGKGIKPDIILFNTVIFAYCRNGQMKEAS 240
           ++PS+ TYN+L+  +  +   + +  +L ++  KG+ PD++ ++TV+  +CR+  + EA 
Sbjct: 411 FSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEAL 470

Query: 241 RIFGEMKDFWLVPDVITYNTFNASYAADSMFVEAIDVVSYTIKNGCKPNPNTYNSLVDSF 300
           R+  EM +  + PD ITY++    +       EA D+    ++ G  P+  TY +L++++
Sbjct: 471 RVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAY 530

Query: 301 CKLNHWEDA 310
           C     E A
Sbjct: 531 CMEGDLEKA 539

[Close]
BLAST of CmoCh11G014070 vs. TAIR10
Match: AT4G31850.1 (AT4G31850.1 proton gradient regulation 3)

HSP 1 Score: 136.0 bits (341), Expect = 4.5e-32
Identity = 86/309 (27.83%), Postives = 146/309 (47.25%), Query Frame = 1 

Query: 1   MKRAGFVAERDTFNTLISAYSRCGLFDQAMAIYRRMLDAAFAPDLPMYNTVLAALARGGL 60
           M+  G      TF   I    R G  ++A  I +RM D    PD+  Y  ++ AL     
Sbjct: 249 METLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARK 308

Query: 61  WEQSEIVLAEMKNGRCKPNELTYCSLLHAYANGKDIRRMSALAEEIHASIIEPQAVLLKT 120
            + ++ V  +MK GR KP+ +TY +LL  +++ +D+  +     E+      P  V    
Sbjct: 309 LDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTI 368

Query: 121 LVLVYSKSDLLMETERAFFELRKHGFSPDLRTLNAMVSIYGRRRMVLKTNEILNFMKDSG 180
           LV    K+    E       +R  G  P+L T N ++    R   +    E+   M+  G
Sbjct: 369 LVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLG 428

Query: 181 YTPSLTTYNSLMYMYSRSENFDKSEEILREIIGKGIKPDIILFNTVIFAYCRNGQMKEAS 240
             P+  TY   +  Y +S +   + E   ++  KGI P+I+  N  +++  + G+ +EA 
Sbjct: 429 VKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAK 488

Query: 241 RIFGEMKDFWLVPDVITYNTFNASYAADSMFVEAIDVVSYTIKNGCKPNPNTYNSLVDSF 300
           +IF  +KD  LVPD +TYN     Y+      EAI ++S  ++NGC+P+    NSL+++ 
Sbjct: 489 QIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTL 548

Query: 301 CKLNHWEDA 310
            K +  ++A
Sbjct: 549 YKADRVDEA 557

[Close]
BLAST of CmoCh11G014070 vs. NCBI nr
Match: gi|449438627|ref|XP_004137089.1| (PREDICTED: pentatricopeptide repeat-containing protein At5g02860 [Cucumis sativus])

HSP 1 Score: 565.1 bits (1455), Expect = 8.5e-158
Identity = 281/342 (82.16%), Postives = 309/342 (90.35%), Query Frame = 1 

Query: 1   MKRAGFVAERDTFNTLISAYSRCGLFDQAMAIYRRMLDAAFAPDLPMYNTVLAALARGGL 60
           MKRAGFV ERDTFNTLISAYSRCG FDQAMAIYRRMLDA   PDL  YN VLAALARGGL
Sbjct: 492 MKRAGFVPERDTFNTLISAYSRCGFFDQAMAIYRRMLDAGVTPDLSTYNAVLAALARGGL 551

Query: 61  WEQSEIVLAEMKNGRCKPNELTYCSLLHAYANGKDIRRMSALAEEIHASIIEPQAVLLKT 120
           WEQSE VLAEMK+GRCKPNELTYCSLLHAYANGK++ RMSALAEEI++ IIEPQAVLLKT
Sbjct: 552 WEQSEKVLAEMKDGRCKPNELTYCSLLHAYANGKEVERMSALAEEIYSGIIEPQAVLLKT 611

Query: 121 LVLVYSKSDLLMETERAFFELRKHGFSPDLRTLNAMVSIYGRRRMVLKTNEILNFMKDSG 180
           LVLVYSKSDLL ETERAF ELR+ GFSPD+ TLNAMVSIYGRRRMV KTNEILNF+KDSG
Sbjct: 612 LVLVYSKSDLLTETERAFLELREQGFSPDITTLNAMVSIYGRRRMVSKTNEILNFIKDSG 671

Query: 181 YTPSLTTYNSLMYMYSRSENFDKSEEILREIIGKGIKPDIILFNTVIFAYCRNGQMKEAS 240
           +TPSLTTYNSLMYMYSR+E+F+KSE+ILREII KG+KPDII FNTVIFAYCRNG+MKEAS
Sbjct: 672 FTPSLTTYNSLMYMYSRTEHFEKSEDILREIIAKGMKPDIISFNTVIFAYCRNGRMKEAS 731

Query: 241 RIFGEMKDFWLVPDVITYNTFNASYAADSMFVEAIDVVSYTIKNGCKPNPNTYNSLVDSF 300
           RIF EMKDF L PDVITYNTF ASYA+DSMF+EAIDVV Y IKNGCKPN NTYNSL+D F
Sbjct: 732 RIFAEMKDFGLAPDVITYNTFIASYASDSMFIEAIDVVKYMIKNGCKPNQNTYNSLIDWF 791

Query: 301 CKLNHWEDANSFVSNLCNLDPHITKEEKRRLLKHISKKKKWS 343
           CKLN  ++A+SF+SNL NLDP +TK+E+RRLL+ ++  KKWS
Sbjct: 792 CKLNRRDEASSFISNLRNLDPSVTKDEERRLLERLN--KKWS 831

[Close]
BLAST of CmoCh11G014070 vs. NCBI nr
Match: gi|700188631|gb|KGN43864.1| (hypothetical protein Csa_7G071530 [Cucumis sativus])

HSP 1 Score: 565.1 bits (1455), Expect = 8.5e-158
Identity = 281/342 (82.16%), Postives = 309/342 (90.35%), Query Frame = 1 

Query: 1   MKRAGFVAERDTFNTLISAYSRCGLFDQAMAIYRRMLDAAFAPDLPMYNTVLAALARGGL 60
           MKRAGFV ERDTFNTLISAYSRCG FDQAMAIYRRMLDA   PDL  YN VLAALARGGL
Sbjct: 492 MKRAGFVPERDTFNTLISAYSRCGFFDQAMAIYRRMLDAGVTPDLSTYNAVLAALARGGL 551

Query: 61  WEQSEIVLAEMKNGRCKPNELTYCSLLHAYANGKDIRRMSALAEEIHASIIEPQAVLLKT 120
           WEQSE VLAEMK+GRCKPNELTYCSLLHAYANGK++ RMSALAEEI++ IIEPQAVLLKT
Sbjct: 552 WEQSEKVLAEMKDGRCKPNELTYCSLLHAYANGKEVERMSALAEEIYSGIIEPQAVLLKT 611

Query: 121 LVLVYSKSDLLMETERAFFELRKHGFSPDLRTLNAMVSIYGRRRMVLKTNEILNFMKDSG 180
           LVLVYSKSDLL ETERAF ELR+ GFSPD+ TLNAMVSIYGRRRMV KTNEILNF+KDSG
Sbjct: 612 LVLVYSKSDLLTETERAFLELREQGFSPDITTLNAMVSIYGRRRMVSKTNEILNFIKDSG 671

Query: 181 YTPSLTTYNSLMYMYSRSENFDKSEEILREIIGKGIKPDIILFNTVIFAYCRNGQMKEAS 240
           +TPSLTTYNSLMYMYSR+E+F+KSE+ILREII KG+KPDII FNTVIFAYCRNG+MKEAS
Sbjct: 672 FTPSLTTYNSLMYMYSRTEHFEKSEDILREIIAKGMKPDIISFNTVIFAYCRNGRMKEAS 731

Query: 241 RIFGEMKDFWLVPDVITYNTFNASYAADSMFVEAIDVVSYTIKNGCKPNPNTYNSLVDSF 300
           RIF EMKDF L PDVITYNTF ASYA+DSMF+EAIDVV Y IKNGCKPN NTYNSL+D F
Sbjct: 732 RIFAEMKDFGLAPDVITYNTFIASYASDSMFIEAIDVVKYMIKNGCKPNQNTYNSLIDWF 791

Query: 301 CKLNHWEDANSFVSNLCNLDPHITKEEKRRLLKHISKKKKWS 343
           CKLN  ++A+SF+SNL NLDP +TK+E+RRLL+ ++  KKWS
Sbjct: 792 CKLNRRDEASSFISNLRNLDPSVTKDEERRLLERLN--KKWS 831

[Close]
BLAST of CmoCh11G014070 vs. NCBI nr
Match: gi|659110047|ref|XP_008455020.1| (PREDICTED: pentatricopeptide repeat-containing protein At5g02860 [Cucumis melo])

HSP 1 Score: 563.9 bits (1452), Expect = 1.9e-157
Identity = 281/338 (83.14%), Postives = 308/338 (91.12%), Query Frame = 1 

Query: 1   MKRAGFVAERDTFNTLISAYSRCGLFDQAMAIYRRMLDAAFAPDLPMYNTVLAALARGGL 60
           MKRAGFV ERDTFNTLISAYSRCG FDQAMAIYRRMLDA   PDL  YN VLAALARGGL
Sbjct: 510 MKRAGFVPERDTFNTLISAYSRCGFFDQAMAIYRRMLDAGVTPDLSTYNAVLAALARGGL 569

Query: 61  WEQSEIVLAEMKNGRCKPNELTYCSLLHAYANGKDIRRMSALAEEIHASIIEPQAVLLKT 120
           WEQSE VLAEMK+GRCKPNELTYCSLLHAYANGK++ RMSALAEEI++  IEPQAVLLKT
Sbjct: 570 WEQSEKVLAEMKDGRCKPNELTYCSLLHAYANGKEVERMSALAEEIYSGNIEPQAVLLKT 629

Query: 121 LVLVYSKSDLLMETERAFFELRKHGFSPDLRTLNAMVSIYGRRRMVLKTNEILNFMKDSG 180
           LVLVYSKSDLL ETERAF ELRK GFSPD+ TLNAMVSIYGRRRMV KTN+ILNF+KDSG
Sbjct: 630 LVLVYSKSDLLTETERAFLELRKQGFSPDITTLNAMVSIYGRRRMVSKTNDILNFIKDSG 689

Query: 181 YTPSLTTYNSLMYMYSRSENFDKSEEILREIIGKGIKPDIILFNTVIFAYCRNGQMKEAS 240
           +TPSLTTYNSLMYMYSR+E+F+KSE+ILREIIGKG+KPDII FNTVIFAYCRNG+MKEAS
Sbjct: 690 FTPSLTTYNSLMYMYSRTEHFEKSEDILREIIGKGMKPDIISFNTVIFAYCRNGRMKEAS 749

Query: 241 RIFGEMKDFWLVPDVITYNTFNASYAADSMFVEAIDVVSYTIKNGCKPNPNTYNSLVDSF 300
           RIF EMKDF LVPDVITYNTF ASYA+DSMF+EAIDVV Y IKNGCKPN NTYNSLVD F
Sbjct: 750 RIFAEMKDFGLVPDVITYNTFIASYASDSMFIEAIDVVRYMIKNGCKPNQNTYNSLVDWF 809

Query: 301 CKLNHWEDANSFVSNLCNLDPHITKEEKRRLLKHISKK 339
           CKLN  ++A+SFVSNL NLDP++TK+E+ RLL+ ++KK
Sbjct: 810 CKLNRRDEASSFVSNLRNLDPYVTKDEECRLLERLNKK 847

[Close]
BLAST of CmoCh11G014070 vs. NCBI nr
Match: gi|590687150|ref|XP_007042582.1| (Pentatricopeptide repeat-containing protein, putative isoform 1 [Theobroma cacao])

HSP 1 Score: 522.3 bits (1344), Expect = 6.3e-145
Identity = 259/342 (75.73%), Postives = 298/342 (87.13%), Query Frame = 1 

Query: 1   MKRAGFVAERDTFNTLISAYSRCGLFDQAMAIYRRMLDAAFAPDLPMYNTVLAALARGGL 60
           MKRAGFV ERDTFNTLISAYSRCG FDQAM++Y+RML+A   PDL  YN VLAALARGGL
Sbjct: 479 MKRAGFVPERDTFNTLISAYSRCGSFDQAMSVYKRMLEAGVTPDLSTYNAVLAALARGGL 538

Query: 61  WEQSEIVLAEMKNGRCKPNELTYCSLLHAYANGKDIRRMSALAEEIHASIIEPQAVLLKT 120
           W+QSE +LAEMK+GRCKPNELTYCSLLH YANGK + RM ALAEEI++ IIEP AVLLKT
Sbjct: 539 WKQSEKILAEMKDGRCKPNELTYCSLLHVYANGKQVDRMHALAEEIYSGIIEPHAVLLKT 598

Query: 121 LVLVYSKSDLLMETERAFFELRKHGFSPDLRTLNAMVSIYGRRRMVLKTNEILNFMKDSG 180
           LVLV SK DLL+ETERAF ELRK GFSPD+ TLNAMVSIYGRR+MV KTNEIL FM +SG
Sbjct: 599 LVLVNSKCDLLVETERAFSELRKKGFSPDITTLNAMVSIYGRRQMVSKTNEILTFMNESG 658

Query: 181 YTPSLTTYNSLMYMYSRSENFDKSEEILREIIGKGIKPDIILFNTVIFAYCRNGQMKEAS 240
           +TPSLTTYNSLMYMYSRSENF++SE++LRE++ KGIKPDII +NTVI+AYCRNG+MKEAS
Sbjct: 659 FTPSLTTYNSLMYMYSRSENFEESEKVLREVLAKGIKPDIISYNTVIYAYCRNGRMKEAS 718

Query: 241 RIFGEMKDFWLVPDVITYNTFNASYAADSMFVEAIDVVSYTIKNGCKPNPNTYNSLVDSF 300
           RIF EM +  L+PDVITYNTF ASYAAD+MF EAIDVV Y IK+GCKPN NTYNS+VD +
Sbjct: 719 RIFSEMGNSGLMPDVITYNTFVASYAADTMFEEAIDVVRYMIKHGCKPNQNTYNSIVDGY 778

Query: 301 CKLNHWEDANSFVSNLCNLDPHITKEEKRRLLKHISKKKKWS 343
           CKLNH ++A++FV+NL  LDPHI+KEE+ RL + I   +KWS
Sbjct: 779 CKLNHQDEASTFVNNLQKLDPHISKEEEIRLSERI--VEKWS 818

[Close]
BLAST of CmoCh11G014070 vs. NCBI nr
Match: gi|567860418|ref|XP_006422863.1| (hypothetical protein CICLE_v10030402mg [Citrus clementina])

HSP 1 Score: 519.2 bits (1336), Expect = 5.3e-144
Identity = 254/338 (75.15%), Postives = 294/338 (86.98%), Query Frame = 1 

Query: 1   MKRAGFVAERDTFNTLISAYSRCGLFDQAMAIYRRMLDAAFAPDLPMYNTVLAALARGGL 60
           MKRAGF+ ERDTFNTLISAYSRCG FDQAM+IY+RML+A   PDL  YN VLAALARGG+
Sbjct: 480 MKRAGFIPERDTFNTLISAYSRCGSFDQAMSIYKRMLEAGVTPDLSTYNAVLAALARGGM 539

Query: 61  WEQSEIVLAEMKNGRCKPNELTYCSLLHAYANGKDIRRMSALAEEIHASIIEPQAVLLKT 120
           WEQSE + AEMK GRCKPNELTY SLLHAYANG++I +M AL+EEI++ IIEP AVLLKT
Sbjct: 540 WEQSEKIFAEMKGGRCKPNELTYSSLLHAYANGREIDQMLALSEEIYSGIIEPHAVLLKT 599

Query: 121 LVLVYSKSDLLMETERAFFELRKHGFSPDLRTLNAMVSIYGRRRMVLKTNEILNFMKDSG 180
           L+LVYSKSDLLM+TERAF EL+K GFSPD+ TLNAM+SIYGRR+MV KTNEIL+FM DSG
Sbjct: 600 LILVYSKSDLLMDTERAFLELKKKGFSPDIPTLNAMISIYGRRQMVAKTNEILHFMNDSG 659

Query: 181 YTPSLTTYNSLMYMYSRSENFDKSEEILREIIGKGIKPDIILFNTVIFAYCRNGQMKEAS 240
           +TPSLTTYN+LMYMYSRSENF ++E++LREI+ KGIKPDII +NTVIFAYCRNG+MKEAS
Sbjct: 660 FTPSLTTYNTLMYMYSRSENFARAEDVLREILAKGIKPDIISYNTVIFAYCRNGRMKEAS 719

Query: 241 RIFGEMKDFWLVPDVITYNTFNASYAADSMFVEAIDVVSYTIKNGCKPNPNTYNSLVDSF 300
           RIF EM+D  LVPDVITYNTF ASYAADS+FVEA+DVV Y IK GCKPN NTYNS+VD +
Sbjct: 720 RIFSEMRDSGLVPDVITYNTFVASYAADSLFVEALDVVRYMIKQGCKPNQNTYNSIVDGY 779

Query: 301 CKLNHWEDANSFVSNLCNLDPHITKEEKRRLLKHISKK 339
           CKLN   +A +FV+NL  LDPH+TKE + +L   I+KK
Sbjct: 780 CKLNQRYEAITFVNNLSKLDPHVTKELECKLSDRIAKK 817

The following BLAST results are available for this feature:
BLAST of CmoCh11G014070 vs. Swiss-Prot
Match NameE-valueIdentityDescription
PP362_ARATH6.3e-13771.30Pentatricopeptide repeat-containing protein At5g02860 OS=Arabidopsis thaliana GN... [more]
PP163_ARATH1.1e-6440.48Pentatricopeptide repeat-containing protein At2g18940, chloroplastic OS=Arabidop... [more]
RF1_ORYSI4.5e-3426.54Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica GN=Rf1 PE=2 SV=1[more]
PP178_ARATH9.4e-3227.91Pentatricopeptide repeat-containing protein At2g31400, chloroplastic OS=Arabidop... [more]
PP407_ARATH1.2e-3125.24Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana GN... [more]
BLAST of CmoCh11G014070 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K4H7_CUCSA5.9e-15882.16Uncharacterized protein OS=Cucumis sativus GN=Csa_7G071530 PE=4 SV=1[more]
A0A061E043_THECC4.4e-14575.73Pentatricopeptide repeat-containing protein, putative isoform 1 OS=Theobroma cac... [more]
V4RNZ1_9ROSI3.7e-14475.15Uncharacterized protein OS=Citrus clementina GN=CICLE_v10030402mg PE=4 SV=1[more]
A0A067EVB9_CITSI3.7e-14475.15Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g003451mg PE=4 SV=1[more]
A0A059AN63_EUCGR1.2e-14274.26Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_I01083 PE=4 SV=1[more]
BLAST of CmoCh11G014070 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G02860.13.6e-13871.30 Pentatricopeptide repeat (PPR) superfamily protein[more]
AT2G18940.16.2e-6640.48 Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT2G31400.15.3e-3327.91 genomes uncoupled 1[more]
AT5G39710.16.9e-3325.24 Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT4G31850.14.5e-3227.83 proton gradient regulation 3[more]
BLAST of CmoCh11G014070 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449438627|ref|XP_004137089.1|8.5e-15882.16PREDICTED: pentatricopeptide repeat-containing protein At5g02860 [Cucumis sativu... [more]
gi|700188631|gb|KGN43864.1|8.5e-15882.16hypothetical protein Csa_7G071530 [Cucumis sativus][more]
gi|659110047|ref|XP_008455020.1|1.9e-15783.14PREDICTED: pentatricopeptide repeat-containing protein At5g02860 [Cucumis melo][more]
gi|590687150|ref|XP_007042582.1|6.3e-14575.73Pentatricopeptide repeat-containing protein, putative isoform 1 [Theobroma cacao... [more]
gi|567860418|ref|XP_006422863.1|5.3e-14475.15hypothetical protein CICLE_v10030402mg [Citrus clementina][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR002885Pentatricopeptide_repeat
IPR011990TPR-like_helical_dom_sf
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008152 metabolic process
cellular_component GO:0005575 cellular_component
molecular_function GO:0008568 microtubule-severing ATPase activity
molecular_function GO:0005515 protein binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh11G014070.1CmoCh11G014070.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 12..38
score: 5.
IPR002885Pentatricopeptide repeatPFAMPF12854PPR_1coord: 214..247
score: 2.7
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 253..302
score: 3.6E-10coord: 43..91
score: 4.
IPR002885Pentatricopeptide repeatPFAMPF13812PPR_3coord: 140..195
score: 2.
IPR002885Pentatricopeptide repeatTIGRFAMsTIGR00756TIGR00756coord: 222..255
score: 1.7E-8coord: 292..312
score: 8.0E-4coord: 187..220
score: 4.2E-7coord: 12..44
score: 1.7E-7coord: 47..80
score: 3.5E-4coord: 152..184
score: 0.
IPR002885Pentatricopeptide repeatPROFILEPS51375PPRcoord: 149..183
score: 9.504coord: 254..288
score: 8.868coord: 219..253
score: 11.838coord: 9..43
score: 11.904coord: 79..113
score: 7.826coord: 44..78
score: 10.391coord: 289..323
score: 8.353coord: 184..218
score: 11.542coord: 114..148
score: 7
IPR011990Tetratricopeptide-like helical domainGENE3DG3DSA:1.25.40.10coord: 187..322
score: 2.1E-7coord: 12..61
score: 2.
NoneNo IPR availableunknownCoilCoilcoord: 338..342
scor
NoneNo IPR availablePANTHERPTHR24015FAMILY NOT NAMEDcoord: 144..330
score: 3.7E-132coord: 1..108
score: 3.7E
NoneNo IPR availablePANTHERPTHR24015:SF308SUBFAMILY NOT NAMEDcoord: 1..108
score: 3.7E-132coord: 144..330
score: 3.7E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmoCh11G014070Cp4.1LG04g07730Cucurbita pepo (Zucchini)cmocpeB126
CmoCh11G014070Bhi05G001004Wax gourdcmowgoB0110
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh11G014070Cucumber (Chinese Long) v3cmocucB0160
CmoCh11G014070Watermelon (97103) v2cmowmbB088
CmoCh11G014070Watermelon (97103) v2cmowmbB112
CmoCh11G014070Watermelon (97103) v2cmowmbB128
CmoCh11G014070Wax gourdcmowgoB0112
CmoCh11G014070Wax gourdcmowgoB0124
CmoCh11G014070Wax gourdcmowgoB0142
CmoCh11G014070Cucurbita moschata (Rifu)cmocmoB002
CmoCh11G014070Cucurbita moschata (Rifu)cmocmoB096
CmoCh11G014070Cucurbita moschata (Rifu)cmocmoB105
CmoCh11G014070Cucurbita moschata (Rifu)cmocmoB110
CmoCh11G014070Cucurbita moschata (Rifu)cmocmoB125
CmoCh11G014070Cucurbita moschata (Rifu)cmocmoB129
CmoCh11G014070Cucumber (Gy14) v1cgycmoB0624
CmoCh11G014070Cucumber (Gy14) v1cgycmoB1084
CmoCh11G014070Cucurbita maxima (Rimu)cmacmoB117
CmoCh11G014070Cucurbita maxima (Rimu)cmacmoB318
CmoCh11G014070Cucurbita maxima (Rimu)cmacmoB494
CmoCh11G014070Cucurbita maxima (Rimu)cmacmoB678
CmoCh11G014070Cucurbita maxima (Rimu)cmacmoB761
CmoCh11G014070Wild cucumber (PI 183967)cmocpiB136
CmoCh11G014070Cucumber (Chinese Long) v2cmocuB107
CmoCh11G014070Cucumber (Chinese Long) v2cmocuB137
CmoCh11G014070Melon (DHL92) v3.5.1cmomeB085
CmoCh11G014070Melon (DHL92) v3.5.1cmomeB114
CmoCh11G014070Watermelon (Charleston Gray)cmowcgB088
CmoCh11G014070Watermelon (Charleston Gray)cmowcgB123
CmoCh11G014070Watermelon (97103) v1cmowmB081
CmoCh11G014070Watermelon (97103) v1cmowmB109
CmoCh11G014070Cucurbita pepo (Zucchini)cmocpeB087
CmoCh11G014070Cucurbita pepo (Zucchini)cmocpeB092
CmoCh11G014070Cucurbita pepo (Zucchini)cmocpeB095
CmoCh11G014070Cucurbita pepo (Zucchini)cmocpeB114
CmoCh11G014070Bottle gourd (USVL1VR-Ls)cmolsiB103
CmoCh11G014070Bottle gourd (USVL1VR-Ls)cmolsiB108
CmoCh11G014070Bottle gourd (USVL1VR-Ls)cmolsiB113
CmoCh11G014070Bottle gourd (USVL1VR-Ls)cmolsiB140
CmoCh11G014070Cucumber (Gy14) v2cgybcmoB156
CmoCh11G014070Cucumber (Gy14) v2cgybcmoB446
CmoCh11G014070Cucumber (Gy14) v2cgybcmoB881
CmoCh11G014070Melon (DHL92) v3.6.1cmomedB091
CmoCh11G014070Melon (DHL92) v3.6.1cmomedB123
CmoCh11G014070Melon (DHL92) v3.6.1cmomedB143
CmoCh11G014070Silver-seed gourdcarcmoB0256
CmoCh11G014070Silver-seed gourdcarcmoB0267
CmoCh11G014070Silver-seed gourdcarcmoB0401
CmoCh11G014070Silver-seed gourdcarcmoB0508
CmoCh11G014070Silver-seed gourdcarcmoB0612
CmoCh11G014070Cucumber (Chinese Long) v3cmocucB0121
CmoCh11G014070Cucumber (Chinese Long) v3cmocucB0136