CmoCh11G014020 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: CDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGACTGTGATAATAGGGCTGAAGCAATCCATGACACAGACAAATGGGCAACTGGCACAACTGATCCCGACCTTAGCGCAAAGTGCCAGGCAGACGACCCATCACAACCAGGGAGACGTTGATGCATTAGAAGAAAGTAAGTATTTTTGGGCTTTCAAACGTCGAGACCCCAAAGTATTCGAGGAAAAATCCAAGGACCCTGACGTAGCTGAATTATGGTTGTCGGCTATTGATGAAATTTTTCGACGCATGAAGTGTCTGGAGGAACATAGACTGAGTTGCGTGACCTATTTGTTACGCGAAGATGCTAAACTGTGGTGGCAATCAGCCTCTCGGGCGATTACTGCAGACAAGGATGACATCACCTGGATGCAGTTTAGAAAAGCGTTTCTCCGAAAATACTTCAAACCATTGGTGCGATATAAGAAGCAACGCGAATTCCTAAGCATAGAGCAGGAAAACAGGTCAGTAGAGGAGTATGAACGAGAGTTCACCCGTTTGTCTCGTTTCGCCCCAATAATGGTCTCAACAGAAGTGCTGAAAGTAGAATGTTTTGTTATGGGTTTGCGGCCCGATGTCTGAGGGGCGGTATCAGCTCACGTTTCACCTAACTATGCAACAGCACTCCGACTTGTCGAGACGCTCGATGTTAGGGAATATCCAACAGAAGACATCTAAACCCACTTAAACACGTCGGTTGACCAGAAGAGAAAGAGAGAGCAGACGTCACCTACCTCCTCAAAGGTATCTTGGCACCAGGCCAAGACAAATTTAAACCAAGAGCGCAGGCAACCAAAGGCTTGCCCACAGAACACGCCACGTGACAGACCACGTTGCTCGAACTGTGGGAGACGTCACCTAGGACAGTGCAGGTTTAAGAATAGGGTATGTTTCAACTGTCACTTAGAAGGCCACGTTGTTGCGCACTGCACCCAAGGGAGAGCAACTAGTATCAATAGACCCCCTAGTAACCAACCAAACTCAAACCTGAGGCCAGCTCCGCAACAGGGGCGAATGTTGCTACCACTCGCCAGGAGGCAGAAAACTCCAACACTGCAGTCACAGGTACACTCTCTATTCTTGGGTACTACGCACTCTTTTATCTCCACTCTTTTATCTCCATTAATCTTGTAAAACACGCAAGAGTAGAAGTTGAACCGCTAGGGTACGGGTTGTCTGTGGGTACCCCAGCAGAGGTAAGTATGGAAGCCTTCGAGAGTGTAAAGGATTATCAGTTTTGTGTGTCAAACTACACGATGGATGTGTGATAATAGTCCTAGATATGACAAATTTTGACGTCAACTTAGGGATGGAGTGGTTAGCTAAAACCCATGTATCCATCGATTGCTTCAACAAGGAGGTGGTGTTCAGACCTCCTGGTCAACCAAGCTTCAAGTTCAAGGGGACCAGGGAGGGAACGGTCTCGAGGATAGTCTCGGCATTAAAGGCAAGGAAGATGTTTTCCCAGGGTGCTTGGGGGATATTAGCTCATGTTGTGGAATTAGGGCGAACTGAGGCGAGCATTAACTCAGTGCTAGTAGTGAGAGAATTCGTGGACGTGTTCCCAGAAGATCTCCCGAGCCTACCCCCAGAGCGTGAGATGGAATTCGAAATTGTACTTGAGCCAGGAACAACCCCTATATCAAGAGCCCTATACAGAATGGCCCCTGCTGAACTCAAAGAACTAAAGTTGCAACTTCAAGAGCTACTAAGCAAATGCTTTATACGACCAAGTGTGTCTCCTTGGGGAGCCCCAGTGATATTTGTGAAGAAGAAGGACAACTCTATGCGCTTATACATGGACTATCGAGAACTTAACAAAGTGACAATTAAAAACAAGTATCCTTTACCCCGAATCGATGACCTGTTCGACCAGTTGCAAGGAGCAGTTGTGTTCTCAAAGATTGACTTACGGTCAGGCTACCATCAGTTGAGGATTAAGGAGAGTGATATCTCAAAGACTGCCTTTCGCATAAGATATGGACATTACGAGTTTAGGGTAATGTCGTTTGGCTTGACCAACACTCCAACAGCATTTATGGGGTTGATGAACAAAGTGTTCAGAGAGTTCTTAGACAACTTCGTGATCGTCTTCATCGATGATATCCTTGTGTGTATTCCAAGACTAAGGAACAACTCGAGGAACATCTTCGGAAAGTGCTGA ATGACTGTGATAATAGGGCTGAAGCAATCCATGACACAGACAAATGGGCAACTGGCACAACTGATCCCGACCTTAGCGCAAAGTGCCAGGCAGACGACCCATCACAACCAGGGAGACGTTGATGCATTAGAAGAAAGTAAGTATTTTTGGGCTTTCAAACGTCGAGACCCCAAAGTATTCGAGGAAAAATCCAAGGACCCTGACGTAGCTGAATTATGGTTGTCGGCTATTGATGAAATTTTTCGACGCATGAAGTGTCTGGAGGAACATAGACTGAGTTGCGTGACCTATTTGTTACGCGAAGATGCTAAACTGTGGTGGCAATCAGCCTCTCGGGCGATTACTGCAGACAAGGATGACATCACCTGGATGCAGTTTAGAAAAGCGTTTCTCCGAAAATACTTCAAACCATTGGTGCGATATAAGAAGCAACGCGAATTCCTAAGCATAGAGCAGGAAAACAGCTCCGCAACAGGGGCGAATGTTGCTACCACTCGCCAGGAGGCAGAAAACTCCAACACTGCAGTCACAGGGATGGAGTGGTTAGCTAAAACCCATGTATCCATCGATTGCTTCAACAAGGAGGTGGTGTTCAGACCTCCTGGTCAACCAAGCTTCAAGTTCAAGGGGACCAGGGAGGGAACGGTCTCGAGGATAGTCTCGGCATTAAAGGCAAGGAAGATGTTTTCCCAGGGTGCTTGGGGGATATTAGCTCATGTTGTGGAATTAGGGCGAACTGAGGCGAGCATTAACTCAGTGCTAGTAGTGAGAGAATTCGTGGACGTGTTCCCAGAAGATCTCCCGAGCCTACCCCCAGAGCGTGAGATGGAATTCGAAATTGTACTTGAGCCAGGAACAACCCCTATATCAAGAGCCCTATACAGAATGGCCCCTGCTGAACTCAAAGAACTAAAGTTGCAACTTCAAGAGCTACTAAGCAAATGCTTTATACGACCAAGTGTGTCTCCTTGGGGAGCCCCAGTGATATTTGTGAAGAAGAAGGACAACTCTATGCGCTTATACATGGACTATCGAGAACTTAACAAAGTGACAATTAAAAACAAGTATCCTTTACCCCGAATCGATGACCTGTTCGACCAGTTGCAAGGAGCAGTTGTGTTCTCAAAGATTGACTTACGGTCAGGCTACCATCAGTTGAGGATTAAGGAGAGTGATATCTCAAAGACTGCCTTTCGCATAAGATATGGACATTACGAGTTTAGGGTAATGTCGTTTGGCTTGACCAACACTCCAACAGCATTTATGGGGTTGATGAACAAAGTGTTCAGAGAGTTCTTAGACAACTTCGTGATCGTCTTCATCGATGATATCCTTGTGTGTATTCCAAGACTAAGGAACAACTCGAGGAACATCTTCGGAAAGTGCTGA ATGACTGTGATAATAGGGCTGAAGCAATCCATGACACAGACAAATGGGCAACTGGCACAACTGATCCCGACCTTAGCGCAAAGTGCCAGGCAGACGACCCATCACAACCAGGGAGACGTTGATGCATTAGAAGAAAGTAAGTATTTTTGGGCTTTCAAACGTCGAGACCCCAAAGTATTCGAGGAAAAATCCAAGGACCCTGACGTAGCTGAATTATGGTTGTCGGCTATTGATGAAATTTTTCGACGCATGAAGTGTCTGGAGGAACATAGACTGAGTTGCGTGACCTATTTGTTACGCGAAGATGCTAAACTGTGGTGGCAATCAGCCTCTCGGGCGATTACTGCAGACAAGGATGACATCACCTGGATGCAGTTTAGAAAAGCGTTTCTCCGAAAATACTTCAAACCATTGGTGCGATATAAGAAGCAACGCGAATTCCTAAGCATAGAGCAGGAAAACAGCTCCGCAACAGGGGCGAATGTTGCTACCACTCGCCAGGAGGCAGAAAACTCCAACACTGCAGTCACAGGGATGGAGTGGTTAGCTAAAACCCATGTATCCATCGATTGCTTCAACAAGGAGGTGGTGTTCAGACCTCCTGGTCAACCAAGCTTCAAGTTCAAGGGGACCAGGGAGGGAACGGTCTCGAGGATAGTCTCGGCATTAAAGGCAAGGAAGATGTTTTCCCAGGGTGCTTGGGGGATATTAGCTCATGTTGTGGAATTAGGGCGAACTGAGGCGAGCATTAACTCAGTGCTAGTAGTGAGAGAATTCGTGGACGTGTTCCCAGAAGATCTCCCGAGCCTACCCCCAGAGCGTGAGATGGAATTCGAAATTGTACTTGAGCCAGGAACAACCCCTATATCAAGAGCCCTATACAGAATGGCCCCTGCTGAACTCAAAGAACTAAAGTTGCAACTTCAAGAGCTACTAAGCAAATGCTTTATACGACCAAGTGTGTCTCCTTGGGGAGCCCCAGTGATATTTGTGAAGAAGAAGGACAACTCTATGCGCTTATACATGGACTATCGAGAACTTAACAAAGTGACAATTAAAAACAAGTATCCTTTACCCCGAATCGATGACCTGTTCGACCAGTTGCAAGGAGCAGTTGTGTTCTCAAAGATTGACTTACGGTCAGGCTACCATCAGTTGAGGATTAAGGAGAGTGATATCTCAAAGACTGCCTTTCGCATAAGATATGGACATTACGAGTTTAGGGTAATGTCGTTTGGCTTGACCAACACTCCAACAGCATTTATGGGGTTGATGAACAAAGTGTTCAGAGAGTTCTTAGACAACTTCGTGATCGTCTTCATCGATGATATCCTTGTGTGTATTCCAAGACTAAGGAACAACTCGAGGAACATCTTCGGAAAGTGCTGA
BLAST of CmoCh11G014020 vs. Swiss-Prot
Match: YI31B_YEAST (Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TY3B-I PE=3 SV=2) HSP 1 Score: 141.4 bits (355), Expect = 2.6e-32 Identity = 76/192 (39.58%), Postives = 113/192 (58.85%), Query Frame = 1
BLAST of CmoCh11G014020 vs. Swiss-Prot
Match: YG31B_YEAST (Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TY3B-G PE=1 SV=3) HSP 1 Score: 141.4 bits (355), Expect = 2.6e-32 Identity = 76/192 (39.58%), Postives = 113/192 (58.85%), Query Frame = 1
BLAST of CmoCh11G014020 vs. Swiss-Prot
Match: RRPO_OENBE (RNA-directed DNA polymerase homolog OS=Oenothera berteroana PE=4 SV=1) HSP 1 Score: 137.9 bits (346), Expect = 2.8e-31 Identity = 65/110 (59.09%), Postives = 83/110 (75.45%), Query Frame = 1
BLAST of CmoCh11G014020 vs. Swiss-Prot
Match: POL2_DROME (Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaster GN=pol PE=3 SV=1) HSP 1 Score: 133.7 bits (335), Expect = 5.3e-30 Identity = 67/177 (37.85%), Postives = 104/177 (58.76%), Query Frame = 1
BLAST of CmoCh11G014020 vs. Swiss-Prot
Match: TF29_SCHPO (Transposon Tf2-9 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=Tf2-9 PE=3 SV=1) HSP 1 Score: 127.1 bits (318), Expect = 5.0e-28 Identity = 65/194 (33.51%), Postives = 114/194 (58.76%), Query Frame = 1
BLAST of CmoCh11G014020 vs. TrEMBL
Match: M5WLY8_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa021229mg PE=4 SV=1) HSP 1 Score: 366.3 bits (939), Expect = 5.4e-98 Identity = 175/271 (64.58%), Postives = 212/271 (78.23%), Query Frame = 1
BLAST of CmoCh11G014020 vs. TrEMBL
Match: M5WXB0_PRUPE (Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa014973mg PE=4 SV=1) HSP 1 Score: 364.0 bits (933), Expect = 2.7e-97 Identity = 172/271 (63.47%), Postives = 213/271 (78.60%), Query Frame = 1
BLAST of CmoCh11G014020 vs. TrEMBL
Match: A0A061EEG7_THECC (DNA/RNA polymerases superfamily protein OS=Theobroma cacao GN=TCM_018243 PE=4 SV=1) HSP 1 Score: 363.2 bits (931), Expect = 4.6e-97 Identity = 179/271 (66.05%), Postives = 210/271 (77.49%), Query Frame = 1
BLAST of CmoCh11G014020 vs. TrEMBL
Match: A0A061G943_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_027940 PE=4 SV=1) HSP 1 Score: 362.8 bits (930), Expect = 6.0e-97 Identity = 178/271 (65.68%), Postives = 210/271 (77.49%), Query Frame = 1
BLAST of CmoCh11G014020 vs. TrEMBL
Match: M5X787_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa022673mg PE=4 SV=1) HSP 1 Score: 360.9 bits (925), Expect = 2.3e-96 Identity = 175/271 (64.58%), Postives = 211/271 (77.86%), Query Frame = 1
BLAST of CmoCh11G014020 vs. NCBI nr
Match: gi|985458836|ref|XP_015387942.1| (PREDICTED: uncharacterized protein LOC107177914 [Citrus sinensis]) HSP 1 Score: 376.7 bits (966), Expect = 5.8e-101 Identity = 181/271 (66.79%), Postives = 217/271 (80.07%), Query Frame = 1
BLAST of CmoCh11G014020 vs. NCBI nr
Match: gi|985452009|ref|XP_015386531.1| (PREDICTED: uncharacterized protein LOC107177356 [Citrus sinensis]) HSP 1 Score: 376.7 bits (966), Expect = 5.8e-101 Identity = 181/271 (66.79%), Postives = 217/271 (80.07%), Query Frame = 1
BLAST of CmoCh11G014020 vs. NCBI nr
Match: gi|645233554|ref|XP_008223402.1| (PREDICTED: uncharacterized protein LOC103323205 [Prunus mume]) HSP 1 Score: 373.2 bits (957), Expect = 6.4e-100 Identity = 180/283 (63.60%), Postives = 219/283 (77.39%), Query Frame = 1
BLAST of CmoCh11G014020 vs. NCBI nr
Match: gi|1009116226|ref|XP_015874658.1| (PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC107411564, partial [Ziziphus jujuba]) HSP 1 Score: 368.6 bits (945), Expect = 1.6e-98 Identity = 178/271 (65.68%), Postives = 215/271 (79.34%), Query Frame = 1
BLAST of CmoCh11G014020 vs. NCBI nr
Match: gi|595885005|ref|XP_007213082.1| (hypothetical protein PRUPE_ppa021229mg [Prunus persica]) HSP 1 Score: 366.3 bits (939), Expect = 7.8e-98 Identity = 175/271 (64.58%), Postives = 212/271 (78.23%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |