CmoCh11G010140 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh11G010140
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Myelin-associated oligodendrocyte basic protein isoform 2
Location	Cmo_Chr11 : 5514798 .. 5515487 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTTTCACCTTCATTGCTTGAACCCCATCCATTGAAATGGAACCAATTCCCAGTTCATTTCGTCCATTCTCCTTCTCCATCAACGAGTGGTCGCTGTCATCTCTACAGACCCTTTGTTCTACCCAAGAATTTGAGAATGGGTGGGTCTAGCTCTGTCAAATTCGGTGTTAGATGCTTCTTTTCCAAGGAGGGGGGGAAGAGTTTGACAACTTCGAATTCCAGGTTGGAGCGATTGGTCGATGGAGATAAACCCAAAAGGCCAATGGAGGTAATTGCCAATTCGATTATGAATGCTCTCATGGCGTTGCGGAAGCCTGCGATTGCTGCGGTGTTGTTGGGATTGCTGTTGATGTACGATCCTAATTCTGCGTTAGCCGCTTCTGGTGGACGTGTTGGAGGAAGTGCGTTTTCGTCGCGCTCGTCTTCGTCTTCGAGGAGTTACTCAACTCCGTCGATGATTTCTGGTTATTCATATTCTGCGCCTTATAGTTCGCCGTCGTTGTTTGGCGGCGGCGGGATTTACGTTGGGCCGGCGGTTGGGGTCGGAGTCGGTGCCGGATCAAGTTTTTTCTTCATATTGGCTGGTTTCGCGGCGTTTCTTCTGGTTTCGGGATTTCTCTCCGATCGGTCCGATAGTAGTGTTCTCACTGCTTCTGAGAAAACTAGCGTGCTTAAACTTCAAGTATGA

mRNA sequence

ATGGTTTCACCTTCATTGCTTGAACCCCATCCATTGAAATGGAACCAATTCCCAGTTCATTTCGTCCATTCTCCTTCTCCATCAACGAGTGGTCGCTGTCATCTCTACAGACCCTTTGTTCTACCCAAGAATTTGAGAATGGGTGGGTCTAGCTCTGTCAAATTCGGTGTTAGATGCTTCTTTTCCAAGGAGGGGGGGAAGAGTTTGACAACTTCGAATTCCAGGTTGGAGCGATTGGTCGATGGAGATAAACCCAAAAGGCCAATGGAGGTAATTGCCAATTCGATTATGAATGCTCTCATGGCGTTGCGGAAGCCTGCGATTGCTGCGGTGTTGTTGGGATTGCTGTTGATGTACGATCCTAATTCTGCGTTAGCCGCTTCTGGTGGACGTGTTGGAGGAAGTGCGTTTTCGTCGCGCTCGTCTTCGTCTTCGAGGAGTTACTCAACTCCGTCGATGATTTCTGGTTATTCATATTCTGCGCCTTATAGTTCGCCGTCGTTGTTTGGCGGCGGCGGGATTTACGTTGGGCCGGCGGTTGGGGTCGGAGTCGGTGCCGGATCAAGTTTTTTCTTCATATTGGCTGGTTTCGCGGCGTTTCTTCTGGTTTCGGGATTTCTCTCCGATCGGTCCGATAGTAGTGTTCTCACTGCTTCTGAGAAAACTAGCGTGCTTAAACTTCAAGTATGA

Coding sequence (CDS)

ATGGTTTCACCTTCATTGCTTGAACCCCATCCATTGAAATGGAACCAATTCCCAGTTCATTTCGTCCATTCTCCTTCTCCATCAACGAGTGGTCGCTGTCATCTCTACAGACCCTTTGTTCTACCCAAGAATTTGAGAATGGGTGGGTCTAGCTCTGTCAAATTCGGTGTTAGATGCTTCTTTTCCAAGGAGGGGGGGAAGAGTTTGACAACTTCGAATTCCAGGTTGGAGCGATTGGTCGATGGAGATAAACCCAAAAGGCCAATGGAGGTAATTGCCAATTCGATTATGAATGCTCTCATGGCGTTGCGGAAGCCTGCGATTGCTGCGGTGTTGTTGGGATTGCTGTTGATGTACGATCCTAATTCTGCGTTAGCCGCTTCTGGTGGACGTGTTGGAGGAAGTGCGTTTTCGTCGCGCTCGTCTTCGTCTTCGAGGAGTTACTCAACTCCGTCGATGATTTCTGGTTATTCATATTCTGCGCCTTATAGTTCGCCGTCGTTGTTTGGCGGCGGCGGGATTTACGTTGGGCCGGCGGTTGGGGTCGGAGTCGGTGCCGGATCAAGTTTTTTCTTCATATTGGCTGGTTTCGCGGCGTTTCTTCTGGTTTCGGGATTTCTCTCCGATCGGTCCGATAGTAGTGTTCTCACTGCTTCTGAGAAAACTAGCGTGCTTAAACTTCAAGTATGA

Homology

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BLAST of CmoCh11G010140 vs. TrEMBL
Match: A0A0A0M3K0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G695410 PE=4 SV=1)

HSP 1 Score: 334.3 bits (856), Expect = 1.1e-88
Identity = 186/231 (80.52%), Postives = 206/231 (89.18%), Query Frame = 1


Query: 1   MVSPSLLEPHPLKWNQ-FPVHFVHSPSPSTSGRCHLYRPFVLPKNLRMGGSSSVKFGVRC 60
           MVS SLLEPHPLKWN+ F VH   SPSPSTSGR HL RPF++P+NL++  SSSVK+ VRC
Sbjct: 1   MVSASLLEPHPLKWNKTFRVHLPSSPSPSTSGRYHLCRPFIVPRNLKIHDSSSVKYPVRC 60

Query: 61  FFSKEGGKSLTT-SNSRLERLVDGDKPKRPMEVIANSIMNALMALRKPAIAAVLLGLLLM 120
           FFS++G  S T+ SNS    LV+GDKPK PMEVI NSI+NAL AL+KPAIAAVLLGLLLM
Sbjct: 61  FFSEKGRSSTTSISNSSSVELVNGDKPKSPMEVIGNSIINALKALQKPAIAAVLLGLLLM 120

Query: 121 YDPNSALAASGGRVGGSAFSSRSSSSSRSYSTPSMISGYSYSAPYSSPSLFGGGGIYVGP 180
           YDPNSALAASGGRVGG+AFSSRSSSSSRSYSTP M SG+SYSAPY+SPS+FGGGGIYVGP
Sbjct: 121 YDPNSALAASGGRVGGNAFSSRSSSSSRSYSTPRMSSGFSYSAPYTSPSMFGGGGIYVGP 180

Query: 181 AVGVGVGAGSSFFFILAGFAAFLLVSGFLSDRSDSSVLTASEKTSVLKLQV 230
           AVGVG+GAGSSF FILAGFAAFLLVSGFLSDRSD+SVLTAS+KTSVLKLQV
Sbjct: 181 AVGVGLGAGSSFVFILAGFAAFLLVSGFLSDRSDTSVLTASDKTSVLKLQV 231

[Close]

BLAST of CmoCh11G010140 vs. TrEMBL
Match: A0A0D2R115_GOSRA (Uncharacterized protein (Fragment) OS=Gossypium raimondii GN=B456_007G2854001 PE=4 SV=1)

HSP 1 Score: 202.6 bits (514), Expect = 5.2e-49
Identity = 136/232 (58.62%), Postives = 159/232 (68.53%), Query Frame = 1


Query: 5   SLLEPHPLKWNQ-FPVHFVHSPSPSTSGRCHLYRPFVLPKNLRMGGSSSVKFGVRCFFSK 64
           SLL+ + L     FP+H      P  S              L   G  S KF V+CFFS 
Sbjct: 7   SLLQSNTLNLKHYFPLHLPLPSPPRLSN---------FTGTLAFNGQRSAKFTVKCFFSS 66

Query: 65  EGGKSLTTSN-SRLERLVDGDKPKRPMEVIANSIMNALMALRKPAIAAVLLGLLLMYDPN 124
           E  K LT+S+     +L      K P E+IA +++ AL AL+KPAIAAVL+GLLLMYDPN
Sbjct: 67  EQRKHLTSSSLGSNNQLSSSSNDKNPFEIIAQTMLKALNALKKPAIAAVLMGLLLMYDPN 126

Query: 125 S-ALAASGGRVGGSAFSSRSSSSSRSYSTP----SMISGYSYSAPYSSPSLFGGGGIYVG 184
           + ALAASGGR+GG +FSS SSSSSRSYS P    S  S  SYSAPY +P+ FGGGG Y+G
Sbjct: 127 NVALAASGGRMGGRSFSS-SSSSSRSYSVPRNGGSRFS--SYSAPYYAPAPFGGGGFYMG 186

Query: 185 PAVGVGVGAGSSFFFILAGFAAFLLVSGFLSDRSDSSVLTASEKTSVLKLQV 230
           PAVGVGVGAGSSFF IL GFAAF+LVSGFLSDRS+SSVLTASE+TSV+KLQV
Sbjct: 187 PAVGVGVGAGSSFFLILVGFAAFVLVSGFLSDRSESSVLTASERTSVIKLQV 226

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BLAST of CmoCh11G010140 vs. TrEMBL
Match: M5VZ21_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa005402mg PE=4 SV=1)

HSP 1 Score: 199.9 bits (507), Expect = 3.3e-48
Identity = 136/238 (57.14%), Postives = 159/238 (66.81%), Query Frame = 1


Query: 1   MVSPSLLEPHPLKWNQFPVHFVHSPSPSTSGRCHLYRPFVLPKNLRMGGSSSVKFGVRCF 60
           M + SLL+P+PLKW                   H   PF+LP  LR   +  +KF     
Sbjct: 76  MATASLLQPNPLKWK------------------HSSCPFLLPP-LRPLPTKPIKF----- 135

Query: 61  FSKEGGKSLTTSNSRLERLVDGDKPKRPMEVIANSIMNALMALRKPAIAAVLLGLLLMYD 120
            S        + N +   LV  D P  P+E+IA+ ++NAL ALRKPA+AAVLLGLLLM D
Sbjct: 136 -SSTFDVEQASCNFKSVPLVIKDNPANPLELIASKLLNALKALRKPAMAAVLLGLLLMSD 195

Query: 121 PNSALAASGGRVGGSAFSSRSSSSS---RSYSTPSMISG---YSYSAPYSSPSLFG---G 180
           PNSALAASGGRVGG++FSSRSSSSS   RSYS P   S    +SYSAPY +PS FG   G
Sbjct: 196 PNSALAASGGRVGGNSFSSRSSSSSSSSRSYSVPRTSSSRPDFSYSAPYYAPSPFGFSGG 255

Query: 181 GGIYVGPAVGVGVGAGSSFFFILAGFAAFLLVSGFLSDRSDSSVLTASEKTSVLKLQV 230
           GG+YVGPA G GVGAGSSFF IL GFAAF+LVSGFLSDRS+ SVLTA+EKT+VLKLQV
Sbjct: 256 GGVYVGPAFGFGVGAGSSFFLILTGFAAFVLVSGFLSDRSEGSVLTATEKTTVLKLQV 288

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BLAST of CmoCh11G010140 vs. TrEMBL
Match: A0A067JUH0_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23463 PE=4 SV=1)

HSP 1 Score: 197.6 bits (501), Expect = 1.7e-47
Identity = 133/235 (56.60%), Postives = 156/235 (66.38%), Query Frame = 1


Query: 1   MVSPSLLEPHPLKWNQFPVHFVHSPSPSTSGRCHLY----RPFVLPKNLRMGGSSSVKFG 60
           M + S LE +PLKWNQ  V F   PS      C+ Y    RP        M G    KF 
Sbjct: 1   MATASFLEWNPLKWNQ-TVPFQLPPSRPVP--CNPYSAPLRPVKYGAAFTMKGHGLAKFS 60

Query: 61  VRCFFSKEGGKSLTTSNSRLERLVDGDKPKRPMEVIANSIMNALMALRKPAIAAVLLGLL 120
            +C F  +   +  +S+S     V       P E+I  +++ AL AL+KPAIAA+L+GLL
Sbjct: 61  GKCSFMDKHLTTSCSSSSSNPISVSRSITTNPFEMIYGAMVRALKALQKPAIAAILVGLL 120

Query: 121 LMYDPNSALAASGGRVGGSAFSSRSSSSSRSYSTPSMISG-YSYSAPYSSPSLFGG-GGI 180
           LMYDPNSA AASGGR+GG +FS  SSSSSRSYS P   S  +SYS PY +PS FGG GGI
Sbjct: 121 LMYDPNSAFAASGGRMGGRSFSRSSSSSSRSYSVPRTSSPEFSYSVPYYAPSPFGGGGGI 180

Query: 181 YVGPAVGVGVGAGSSFFFILAGFAAFLLVSGFLSDRSDSSVLTASEKTSVLKLQV 230
           YVGPAVGVGVGAGSS F ILAGFAAF+LVSGFLSDRS+  VLTA+EKTSV+KLQV
Sbjct: 181 YVGPAVGVGVGAGSSLFLILAGFAAFMLVSGFLSDRSEGGVLTATEKTSVVKLQV 232

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BLAST of CmoCh11G010140 vs. TrEMBL
Match: A0A061F284_THECC (Myelin-associated oligodendrocyte basic protein isoform 1 OS=Theobroma cacao GN=TCM_026403 PE=4 SV=1)

HSP 1 Score: 195.7 bits (496), Expect = 6.3e-47
Identity = 143/235 (60.85%), Postives = 159/235 (67.66%), Query Frame = 1


Query: 5   SLLEPHPLKWNQ-FPVHFVHSPSPSTSGRCHLYRPFVLPK---NLRMGGSSSVKFGVRCF 64
           SLL+ +PLK    FP H    P PS         P  LPK   NL      S K  VRCF
Sbjct: 7   SLLQSNPLKLKHYFPRHL---PPPS---------PPRLPKFSGNLTFQTQGSTKCNVRCF 66

Query: 65  FSKEGGKSLTTSNSRLERLVDGDKPKRPMEVIANSIMNALMALRKPAIAAVLLGLLLMYD 124
              E  KS    ++ L    DG   K P E+IA +I  AL AL+KPAIAAVLLGLLLMYD
Sbjct: 67  LLPEKRKSSKLDSNHLSSSSDG---KHPFEIIAETISKALNALKKPAIAAVLLGLLLMYD 126

Query: 125 PNSA-LAASGGRVGGSAFSSRSSSSSRSYSTP----SMISGYSYSAPYSSPSLFGGGG-I 184
           PN+A LAASGGR+GG +FSS SSSSSRSYS P    S  S  SYS PY +P+ FGGGG  
Sbjct: 127 PNNAALAASGGRMGGRSFSS-SSSSSRSYSVPRNGGSRFS--SYSVPYYAPAPFGGGGGF 186

Query: 185 YVGPAVGVGVGAGSSFFFILAGFAAFLLVSGFLSDRSDSSVLTASEKTSVLKLQV 230
           Y+GPAVGVGVGAGSSFF IL GFAAF+LVSGFLSDRS+SSVLTASE+TSVLKLQV
Sbjct: 187 YMGPAVGVGVGAGSSFFLILIGFAAFVLVSGFLSDRSESSVLTASERTSVLKLQV 223

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BLAST of CmoCh11G010140 vs. TAIR10
Match: AT1G54520.1 (AT1G54520.1 unknown protein)

HSP 1 Score: 152.1 bits (383), Expect = 4.0e-37
Identity = 119/236 (50.42%), Postives = 140/236 (59.32%), Query Frame = 1


Query: 3   SPSLLEPHPLKWNQFPVHFVHSPSPSTSGRCHLYRPFVLPKNLRMGGSSSVKFGVRCFFS 62
           S + LE  P +WNQ        P P T  R H     +  K  R   S  ++  V+   S
Sbjct: 4   SSTFLELTPFQWNQ--------PLPYTQ-RPHHRTVLLYSKPQRRSNSIRLQISVKYKQS 63

Query: 63  KEGGKSLTTSNSRLERLVDGDKPKRPMEVIANSIMNALMALRKPAIAAVLLGLLLMYDPN 122
                    SN              P E IA  +  AL +L+KPAIAAVLLGLLL YDPN
Sbjct: 64  TSSSDPDLRSNFN------------PFEQIAIQVKKALDSLKKPAIAAVLLGLLLFYDPN 123

Query: 123 SALAASGGRVGGSAFSSR----SSSSSRSYSTPSMIS-GYSYS---APYSSPSLFGGGGI 182
           SALAASGGR+GG++FSSR    SSSSS+SYS P   +  +SYS   APY  PS FGGG  
Sbjct: 124 SALAASGGRIGGNSFSSRSRSSSSSSSQSYSVPRTSNPSFSYSARTAPYYGPSPFGGG-- 183

Query: 183 YVGPAVGVGVGAGSSFFFILAGFAAFLLVSGFLSDRS-DSSVLTASEKTSVLKLQV 230
           +VGPAVG G G  SSF  IL GFAAF+LVSGFLSDRS D S+LT ++KTSV+KLQV
Sbjct: 184 FVGPAVGFGFGGFSSFSLILVGFAAFVLVSGFLSDRSQDDSILTDTQKTSVIKLQV 216

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BLAST of CmoCh11G010140 vs. NCBI nr
Match: gi|659131254|ref|XP_008465590.1| (PREDICTED: uncharacterized protein LOC103503226 [Cucumis melo])

HSP 1 Score: 348.2 bits (892), Expect = 1.1e-92
Identity = 193/231 (83.55%), Postives = 208/231 (90.04%), Query Frame = 1


Query: 1   MVSPSLLEPHPLKWNQ-FPVHFVHSPSPSTSGRCHLYRPFVLPKNLRMGGSSSVKFGVRC 60
           MVS SLLEPHPLKWN+ FP+HF  SPSPSTSGR HLYRPF++P+NL++  SSSVK  VRC
Sbjct: 1   MVSASLLEPHPLKWNKTFPLHFASSPSPSTSGRYHLYRPFIVPRNLKIHDSSSVKSRVRC 60

Query: 61  FFSKEGGKSLTT-SNSRLERLVDGDKPKRPMEVIANSIMNALMALRKPAIAAVLLGLLLM 120
           FFS++G  S TT SNS    LV+GDKPK PMEVI NSI+NAL  LRKPAIAAVLLGLLLM
Sbjct: 61  FFSEKGRSSTTTISNSCSVELVNGDKPKSPMEVIGNSIINALKTLRKPAIAAVLLGLLLM 120

Query: 121 YDPNSALAASGGRVGGSAFSSRSSSSSRSYSTPSMISGYSYSAPYSSPSLFGGGGIYVGP 180
           YDPNSALAASGGRVGG+AFSSRSSSSSRSYSTP M SG+SYSAPY+SPS+FGGGGIYVGP
Sbjct: 121 YDPNSALAASGGRVGGNAFSSRSSSSSRSYSTPRMSSGFSYSAPYTSPSMFGGGGIYVGP 180

Query: 181 AVGVGVGAGSSFFFILAGFAAFLLVSGFLSDRSDSSVLTASEKTSVLKLQV 230
           AVGVGVGAGSSFFFILAGFAAFLLVSGFLSDRSDSSVLTASEKTSVLKLQV
Sbjct: 181 AVGVGVGAGSSFFFILAGFAAFLLVSGFLSDRSDSSVLTASEKTSVLKLQV 231

[Close]

BLAST of CmoCh11G010140 vs. NCBI nr
Match: gi|700211710|gb|KGN66806.1| (hypothetical protein Csa_1G695410 [Cucumis sativus])

HSP 1 Score: 334.3 bits (856), Expect = 1.6e-88
Identity = 186/231 (80.52%), Postives = 206/231 (89.18%), Query Frame = 1


Query: 1   MVSPSLLEPHPLKWNQ-FPVHFVHSPSPSTSGRCHLYRPFVLPKNLRMGGSSSVKFGVRC 60
           MVS SLLEPHPLKWN+ F VH   SPSPSTSGR HL RPF++P+NL++  SSSVK+ VRC
Sbjct: 1   MVSASLLEPHPLKWNKTFRVHLPSSPSPSTSGRYHLCRPFIVPRNLKIHDSSSVKYPVRC 60

Query: 61  FFSKEGGKSLTT-SNSRLERLVDGDKPKRPMEVIANSIMNALMALRKPAIAAVLLGLLLM 120
           FFS++G  S T+ SNS    LV+GDKPK PMEVI NSI+NAL AL+KPAIAAVLLGLLLM
Sbjct: 61  FFSEKGRSSTTSISNSSSVELVNGDKPKSPMEVIGNSIINALKALQKPAIAAVLLGLLLM 120

Query: 121 YDPNSALAASGGRVGGSAFSSRSSSSSRSYSTPSMISGYSYSAPYSSPSLFGGGGIYVGP 180
           YDPNSALAASGGRVGG+AFSSRSSSSSRSYSTP M SG+SYSAPY+SPS+FGGGGIYVGP
Sbjct: 121 YDPNSALAASGGRVGGNAFSSRSSSSSRSYSTPRMSSGFSYSAPYTSPSMFGGGGIYVGP 180

Query: 181 AVGVGVGAGSSFFFILAGFAAFLLVSGFLSDRSDSSVLTASEKTSVLKLQV 230
           AVGVG+GAGSSF FILAGFAAFLLVSGFLSDRSD+SVLTAS+KTSVLKLQV
Sbjct: 181 AVGVGLGAGSSFVFILAGFAAFLLVSGFLSDRSDTSVLTASDKTSVLKLQV 231

[Close]

BLAST of CmoCh11G010140 vs. NCBI nr
Match: gi|449449537|ref|XP_004142521.1| (PREDICTED: uncharacterized protein LOC101210275 [Cucumis sativus])

HSP 1 Score: 334.3 bits (856), Expect = 1.6e-88
Identity = 186/231 (80.52%), Postives = 206/231 (89.18%), Query Frame = 1


Query: 1   MVSPSLLEPHPLKWNQ-FPVHFVHSPSPSTSGRCHLYRPFVLPKNLRMGGSSSVKFGVRC 60
           MVS SLLEPHPLKWN+ F VH   SPSPSTSGR HL RPF++P+NL++  SSSVK+ VRC
Sbjct: 1   MVSASLLEPHPLKWNKTFRVHLPSSPSPSTSGRYHLCRPFIVPRNLKIHDSSSVKYPVRC 60

Query: 61  FFSKEGGKSLTT-SNSRLERLVDGDKPKRPMEVIANSIMNALMALRKPAIAAVLLGLLLM 120
           FFS++G  S T+ SNS    LV+GDKPK PMEVI NSI+NAL AL+KPAIAAVLLGLLLM
Sbjct: 61  FFSEKGRSSTTSISNSSSVELVNGDKPKSPMEVIGNSIINALKALQKPAIAAVLLGLLLM 120

Query: 121 YDPNSALAASGGRVGGSAFSSRSSSSSRSYSTPSMISGYSYSAPYSSPSLFGGGGIYVGP 180
           YDPNSALAASGGRVGG+AFSSRSSSSSRSYSTP M SG+SYSAPY+SPS+FGGGGIYVGP
Sbjct: 121 YDPNSALAASGGRVGGNAFSSRSSSSSRSYSTPRMSSGFSYSAPYTSPSMFGGGGIYVGP 180

Query: 181 AVGVGVGAGSSFFFILAGFAAFLLVSGFLSDRSDSSVLTASEKTSVLKLQV 230
           AVGVG+GAGSSF FILAGFAAFLLVSGFLSDRSD+SVLTAS+KTSVLKLQV
Sbjct: 181 AVGVGLGAGSSFVFILAGFAAFLLVSGFLSDRSDTSVLTASDKTSVLKLQV 231

[Close]

BLAST of CmoCh11G010140 vs. NCBI nr
Match: gi|1009117523|ref|XP_015875363.1| (PREDICTED: uncharacterized protein LOC107412168 [Ziziphus jujuba])

HSP 1 Score: 204.5 bits (519), Expect = 1.9e-49
Identity = 138/236 (58.47%), Postives = 154/236 (65.25%), Query Frame = 1


Query: 6   LLEPHPLKWNQ-FPVHFVHSPSPSTSGRCHLYRPFVLPKNLRMGGSSSV-----KFGVRC 65
           LLE +PL+W Q FP+                 R F L +  ++ G   V     KF VRC
Sbjct: 7   LLEANPLRWKQSFPILLPR-------------RKFCLVQPAKLNGGFKVEQVSGKFSVRC 66

Query: 66  FFSKEGGKSLTTSNSRLERLVDGDKPKRPMEVIANSIMNALMALRKPAIAAVLLGLLLMY 125
           F      K           L      + P E++A++I+ AL ALRKPAIA VLLGLLLMY
Sbjct: 67  F---SASKKHLLGLDNCSGLASKQNRRNPFEIVADTIVKALKALRKPAIAVVLLGLLLMY 126

Query: 126 DPNSALAASGGRVGGSAFSSRSSSSS-RSYSTPSMIS-GYSYSAPYSSPSLFG----GGG 185
           DPNSALAASGGRVGG AFSSRSSSSS RSYS P   S G+SYS PY +PS FG    GGG
Sbjct: 127 DPNSALAASGGRVGGKAFSSRSSSSSSRSYSVPRTSSPGFSYSVPYYAPSPFGFGGGGGG 186

Query: 186 IYVGPAVGVGVGAGSSFFFILAGFAAFLLVSGFLSDRSDSSVLTASEKTSVLKLQV 230
            YVGPA GVGVGAGSSFF IL GFAAF+LVSGFLSDRSD SVLTA+EKTSVLKLQV
Sbjct: 187 FYVGPAFGVGVGAGSSFFLILVGFAAFVLVSGFLSDRSDGSVLTATEKTSVLKLQV 226

[Close]

BLAST of CmoCh11G010140 vs. NCBI nr
Match: gi|763777895|gb|KJB45018.1| (hypothetical protein B456_007G2854001, partial [Gossypium raimondii])

HSP 1 Score: 202.6 bits (514), Expect = 7.4e-49
Identity = 136/232 (58.62%), Postives = 159/232 (68.53%), Query Frame = 1


Query: 5   SLLEPHPLKWNQ-FPVHFVHSPSPSTSGRCHLYRPFVLPKNLRMGGSSSVKFGVRCFFSK 64
           SLL+ + L     FP+H      P  S              L   G  S KF V+CFFS 
Sbjct: 7   SLLQSNTLNLKHYFPLHLPLPSPPRLSN---------FTGTLAFNGQRSAKFTVKCFFSS 66

Query: 65  EGGKSLTTSN-SRLERLVDGDKPKRPMEVIANSIMNALMALRKPAIAAVLLGLLLMYDPN 124
           E  K LT+S+     +L      K P E+IA +++ AL AL+KPAIAAVL+GLLLMYDPN
Sbjct: 67  EQRKHLTSSSLGSNNQLSSSSNDKNPFEIIAQTMLKALNALKKPAIAAVLMGLLLMYDPN 126

Query: 125 S-ALAASGGRVGGSAFSSRSSSSSRSYSTP----SMISGYSYSAPYSSPSLFGGGGIYVG 184
           + ALAASGGR+GG +FSS SSSSSRSYS P    S  S  SYSAPY +P+ FGGGG Y+G
Sbjct: 127 NVALAASGGRMGGRSFSS-SSSSSRSYSVPRNGGSRFS--SYSAPYYAPAPFGGGGFYMG 186

Query: 185 PAVGVGVGAGSSFFFILAGFAAFLLVSGFLSDRSDSSVLTASEKTSVLKLQV 230
           PAVGVGVGAGSSFF IL GFAAF+LVSGFLSDRS+SSVLTASE+TSV+KLQV
Sbjct: 187 PAVGVGVGAGSSFFLILVGFAAFVLVSGFLSDRSESSVLTASERTSVIKLQV 226

The following BLAST results are available for this feature:

BLAST of CmoCh11G010140 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmoCh11G010140 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0M3K0_CUCSA	1.1e-88	80.52	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G695410 PE=4 SV=1	[more]
A0A0D2R115_GOSRA	5.2e-49	58.62	Uncharacterized protein (Fragment) OS=Gossypium raimondii GN=B456_007G2854001 PE...	[more]
M5VZ21_PRUPE	3.3e-48	57.14	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa005402mg PE=4 SV=1	[more]
A0A067JUH0_JATCU	1.7e-47	56.60	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23463 PE=4 SV=1	[more]
A0A061F284_THECC	6.3e-47	60.85	Myelin-associated oligodendrocyte basic protein isoform 1 OS=Theobroma cacao GN=...	[more]

BLAST of CmoCh11G010140 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G54520.1	4.0e-37	50.42	unknown protein	[more]

BLAST of CmoCh11G010140 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659131254\|ref\|XP_008465590.1\|	1.1e-92	83.55	PREDICTED: uncharacterized protein LOC103503226 [Cucumis melo]	[more]
gi\|700211710\|gb\|KGN66806.1\|	1.6e-88	80.52	hypothetical protein Csa_1G695410 [Cucumis sativus]	[more]
gi\|449449537\|ref\|XP_004142521.1\|	1.6e-88	80.52	PREDICTED: uncharacterized protein LOC101210275 [Cucumis sativus]	[more]
gi\|1009117523\|ref\|XP_015875363.1\|	1.9e-49	58.47	PREDICTED: uncharacterized protein LOC107412168 [Ziziphus jujuba]	[more]
gi\|763777895\|gb\|KJB45018.1\|	7.4e-49	58.62	hypothetical protein B456_007G2854001, partial [Gossypium raimondii]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR010903	DUF1517

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh11G010140.1	CmoCh11G010140.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010903	Protein of unknown function DUF1517	PFAM	PF07466	DUF1517	coord: 126..229 score: 6.8
None	No IPR available	PANTHER	PTHR33975	FAMILY NOT NAMED	coord: 86..229 score: 1.1
None	No IPR available	PANTHER	PTHR33975:SF2	SUBFAMILY NOT NAMED	coord: 86..229 score: 1.1

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh11G010140	CmaCh11G009950	Cucurbita maxima (Rimu)	cmacmoB112
CmoCh11G010140	Csa1G695410	Cucumber (Chinese Long) v2	cmocuB075
CmoCh11G010140	CSPI01G33800	Wild cucumber (PI 183967)	cmocpiB083
CmoCh11G010140	Lsi06G008090	Bottle gourd (USVL1VR-Ls)	cmolsiB118
CmoCh11G010140	Cp4.1LG04g01740	Cucurbita pepo (Zucchini)	cmocpeB127
CmoCh11G010140	CsaV3_1G045680	Cucumber (Chinese Long) v3	cmocucB0090
CmoCh11G010140	Cla97C06G118890	Watermelon (97103) v2	cmowmbB125
CmoCh11G010140	CsGy1G032360	Cucumber (Gy14) v2	cgybcmoB027
CmoCh11G010140	Carg16494	Silver-seed gourd	carcmoB1222

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh11G010140	Cucurbita moschata (Rifu)	cmocmoB086
CmoCh11G010140	Cucumber (Gy14) v1	cgycmoB0806
CmoCh11G010140	Cucurbita maxima (Rimu)	cmacmoB073
CmoCh11G010140	Wild cucumber (PI 183967)	cmocpiB087
CmoCh11G010140	Cucumber (Chinese Long) v2	cmocuB082
CmoCh11G010140	Melon (DHL92) v3.5.1	cmomeB102
CmoCh11G010140	Melon (DHL92) v3.5.1	cmomeB107
CmoCh11G010140	Watermelon (Charleston Gray)	cmowcgB104
CmoCh11G010140	Watermelon (Charleston Gray)	cmowcgB121
CmoCh11G010140	Watermelon (97103) v1	cmowmB092
CmoCh11G010140	Bottle gourd (USVL1VR-Ls)	cmolsiB084
CmoCh11G010140	Bottle gourd (USVL1VR-Ls)	cmolsiB125
CmoCh11G010140	Cucumber (Gy14) v2	cgybcmoB034
CmoCh11G010140	Melon (DHL92) v3.6.1	cmomedB115
CmoCh11G010140	Melon (DHL92) v3.6.1	cmomedB110
CmoCh11G010140	Cucumber (Chinese Long) v3	cmocucB0099
CmoCh11G010140	Cucumber (Chinese Long) v3	cmocucB0118
CmoCh11G010140	Watermelon (97103) v2	cmowmbB106
CmoCh11G010140	Wax gourd	cmowgoB0100
CmoCh11G010140	Wax gourd	cmowgoB0162