CSPI01G33800 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI01G33800
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionMyelin-associated oligodendrocyte basic protein isoform 2
LocationChr1 : 28762621 .. 28763455 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
AACAATCCTCATCCTTCCCACCAAAATTAATTGAAATAAAGAAAGAAAGAAAAATAAAATGAAAAAGAAAAATCAAATCTCTAATCTCTGATCCATTTCATACTCTCTTTGAGATTCCAGTCTCAATCTTCCAAAATCCATGGTTTCAGCGTCTTTGCTCGAACCCCATCCATTAAAATGGAACAAAACATTCCGAGTTCATTTACCCTCCTCTCCTTCTCCATCAACAAGTGGTCGCTATCATCTCTGCCGACCCTTTATCGTACCCAGAAATTTGAAAATACATGATTCTAGCTCTGTCAAATACCCTGTTAGATGCTTCTTTTCCGAGAAAGGGAGGAGTTCAACGACTTCCATTTCGAATTCTTCTTCGGTGGAATTGGTTAATGGAGATAAACCCAAAAGTCCAATGGAGGTAATTGGGAATTCGATTATTAATGCCCTCAAGGCGTTGCAGAAACCTGCAATTGCTGCGGTGTTGTTGGGATTGCTGTTGATGTACGATCCCAATTCTGCGTTGGCCGCTTCTGGTGGACGAGTTGGAGGAAATGCGTTTTCGTCTCGCTCCTCCTCGTCTTCGAGGAGTTACTCGACTCCCAGGATGAGTTCGGGGTTTTCGTATTCTGCACCGTACACTTCTCCGTCGATGTTTGGCGGTGGCGGGATTTATGTTGGGCCGGCAGTTGGGGTTGGACTCGGTGCTGGCTCGAGTTTCGTCTTCATATTGGCGGGTTTCGCGGCGTTTCTTTTGGTCTCTGGATTTCTCTCTGATCGTTCCGACACTAGTGTTCTTACTGCCTCTGATAAAACTAGCGTACTTAAACTACAAGTATGA

mRNA sequence

ATGGTTTCAGCGTCTTTGCTCGAACCCCATCCATTAAAATGGAACAAAACATTCCGAGTTCATTTACCCTCCTCTCCTTCTCCATCAACAAGTGGTCGCTATCATCTCTGCCGACCCTTTATCGTACCCAGAAATTTGAAAATACATGATTCTAGCTCTGTCAAATACCCTGTTAGATGCTTCTTTTCCGAGAAAGGGAGGAGTTCAACGACTTCCATTTCGAATTCTTCTTCGGTGGAATTGGTTAATGGAGATAAACCCAAAAGTCCAATGGAGGTAATTGGGAATTCGATTATTAATGCCCTCAAGGCGTTGCAGAAACCTGCAATTGCTGCGGTGTTGTTGGGATTGCTGTTGATGTACGATCCCAATTCTGCGTTGGCCGCTTCTGGTGGACGAGTTGGAGGAAATGCGTTTTCGTCTCGCTCCTCCTCGTCTTCGAGGAGTTACTCGACTCCCAGGATGAGTTCGGGGTTTTCGTATTCTGCACCGTACACTTCTCCGTCGATGTTTGGCGGTGGCGGGATTTATGTTGGGCCGGCAGTTGGGGTTGGACTCGGTGCTGGCTCGAGTTTCGTCTTCATATTGGCGGGTTTCGCGGCGTTTCTTTTGGTCTCTGGATTTCTCTCTGATCGTTCCGACACTAGTGTTCTTACTGCCTCTGATAAAACTAGCGTACTTAAACTACAAGTATGA

Coding sequence (CDS)

ATGGTTTCAGCGTCTTTGCTCGAACCCCATCCATTAAAATGGAACAAAACATTCCGAGTTCATTTACCCTCCTCTCCTTCTCCATCAACAAGTGGTCGCTATCATCTCTGCCGACCCTTTATCGTACCCAGAAATTTGAAAATACATGATTCTAGCTCTGTCAAATACCCTGTTAGATGCTTCTTTTCCGAGAAAGGGAGGAGTTCAACGACTTCCATTTCGAATTCTTCTTCGGTGGAATTGGTTAATGGAGATAAACCCAAAAGTCCAATGGAGGTAATTGGGAATTCGATTATTAATGCCCTCAAGGCGTTGCAGAAACCTGCAATTGCTGCGGTGTTGTTGGGATTGCTGTTGATGTACGATCCCAATTCTGCGTTGGCCGCTTCTGGTGGACGAGTTGGAGGAAATGCGTTTTCGTCTCGCTCCTCCTCGTCTTCGAGGAGTTACTCGACTCCCAGGATGAGTTCGGGGTTTTCGTATTCTGCACCGTACACTTCTCCGTCGATGTTTGGCGGTGGCGGGATTTATGTTGGGCCGGCAGTTGGGGTTGGACTCGGTGCTGGCTCGAGTTTCGTCTTCATATTGGCGGGTTTCGCGGCGTTTCTTTTGGTCTCTGGATTTCTCTCTGATCGTTCCGACACTAGTGTTCTTACTGCCTCTGATAAAACTAGCGTACTTAAACTACAAGTATGA
Homology
[Close]
BLAST of CSPI01G33800 vs. TrEMBL
Match: A0A0A0M3K0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G695410 PE=4 SV=1)

HSP 1 Score: 432.6 bits (1111), Expect = 3.1e-118
Identity = 231/231 (100.00%), Postives = 231/231 (100.00%), Query Frame = 1 

Query: 1   MVSASLLEPHPLKWNKTFRVHLPSSPSPSTSGRYHLCRPFIVPRNLKIHDSSSVKYPVRC 60
           MVSASLLEPHPLKWNKTFRVHLPSSPSPSTSGRYHLCRPFIVPRNLKIHDSSSVKYPVRC
Sbjct: 1   MVSASLLEPHPLKWNKTFRVHLPSSPSPSTSGRYHLCRPFIVPRNLKIHDSSSVKYPVRC 60

Query: 61  FFSEKGRSSTTSISNSSSVELVNGDKPKSPMEVIGNSIINALKALQKPAIAAVLLGLLLM 120
           FFSEKGRSSTTSISNSSSVELVNGDKPKSPMEVIGNSIINALKALQKPAIAAVLLGLLLM
Sbjct: 61  FFSEKGRSSTTSISNSSSVELVNGDKPKSPMEVIGNSIINALKALQKPAIAAVLLGLLLM 120

Query: 121 YDPNSALAASGGRVGGNAFSSRSSSSSRSYSTPRMSSGFSYSAPYTSPSMFGGGGIYVGP 180
           YDPNSALAASGGRVGGNAFSSRSSSSSRSYSTPRMSSGFSYSAPYTSPSMFGGGGIYVGP
Sbjct: 121 YDPNSALAASGGRVGGNAFSSRSSSSSRSYSTPRMSSGFSYSAPYTSPSMFGGGGIYVGP 180

Query: 181 AVGVGLGAGSSFVFILAGFAAFLLVSGFLSDRSDTSVLTASDKTSVLKLQV 232
           AVGVGLGAGSSFVFILAGFAAFLLVSGFLSDRSDTSVLTASDKTSVLKLQV
Sbjct: 181 AVGVGLGAGSSFVFILAGFAAFLLVSGFLSDRSDTSVLTASDKTSVLKLQV 231

[Close]
BLAST of CSPI01G33800 vs. TrEMBL
Match: A0A067JUH0_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23463 PE=4 SV=1)

HSP 1 Score: 211.5 bits (537), Expect = 1.1e-51
Identity = 137/241 (56.85%), Postives = 171/241 (70.95%), Query Frame = 1 

Query: 1   MVSASLLEPHPLKWNKTFRVHLPSS-PSPSTSGRYHLCRPFIVP-RNLKIHDSSSVK--- 60
           M +AS LE +PLKWN+T    LP S P P        C P+  P R +K   + ++K   
Sbjct: 1   MATASFLEWNPLKWNQTVPFQLPPSRPVP--------CNPYSAPLRPVKYGAAFTMKGHG 60

Query: 61  ---YPVRCFFSEKGRSSTTSISNSSSVELVNGDKPKSPMEVIGNSIINALKALQKPAIAA 120
              +  +C F +K  +++ S S+S+ +  V+     +P E+I  +++ ALKALQKPAIAA
Sbjct: 61  LAKFSGKCSFMDKHLTTSCSSSSSNPIS-VSRSITTNPFEMIYGAMVRALKALQKPAIAA 120

Query: 121 VLLGLLLMYDPNSALAASGGRVGGNAFSSRSSSSSRSYSTPRMSS-GFSYSAPYTSPSMF 180
           +L+GLLLMYDPNSA AASGGR+GG +FS  SSSSSRSYS PR SS  FSYS PY +PS F
Sbjct: 121 ILVGLLLMYDPNSAFAASGGRMGGRSFSRSSSSSSRSYSVPRTSSPEFSYSVPYYAPSPF 180

Query: 181 -GGGGIYVGPAVGVGLGAGSSFVFILAGFAAFLLVSGFLSDRSDTSVLTASDKTSVLKLQ 232
            GGGGIYVGPAVGVG+GAGSS   ILAGFAAF+LVSGFLSDRS+  VLTA++KTSV+KLQ
Sbjct: 181 GGGGGIYVGPAVGVGVGAGSSLFLILAGFAAFMLVSGFLSDRSEGGVLTATEKTSVVKLQ 232

[Close]
BLAST of CSPI01G33800 vs. TrEMBL
Match: A0A0D2R115_GOSRA (Uncharacterized protein (Fragment) OS=Gossypium raimondii GN=B456_007G2854001 PE=4 SV=1)

HSP 1 Score: 207.6 bits (527), Expect = 1.6e-50
Identity = 130/232 (56.03%), Postives = 163/232 (70.26%), Query Frame = 1 

Query: 3   SASLLEPHPLKWNKTFRVHLPSSPSPSTSGRYHLCRPFIVPRNLKIHDSSSVKYPVRCFF 62
           ++SLL+ + L     F +HLP  PSP     +           L  +   S K+ V+CFF
Sbjct: 5   TSSLLQSNTLNLKHYFPLHLPL-PSPPRLSNF--------TGTLAFNGQRSAKFTVKCFF 64

Query: 63  SEKGRSSTTSISNSSSVELVNGDKPKSPMEVIGNSIINALKALQKPAIAAVLLGLLLMYD 122
           S + R   TS S  S+ +L +    K+P E+I  +++ AL AL+KPAIAAVL+GLLLMYD
Sbjct: 65  SSEQRKHLTSSSLGSNNQLSSSSNDKNPFEIIAQTMLKALNALKKPAIAAVLMGLLLMYD 124

Query: 123 PNS-ALAASGGRVGGNAFSSRSSSSSRSYSTPRMSSG--FSYSAPYTSPSMFGGGGIYVG 182
           PN+ ALAASGGR+GG +FSS SSSSSRSYS PR       SYSAPY +P+ FGGGG Y+G
Sbjct: 125 PNNVALAASGGRMGGRSFSS-SSSSSRSYSVPRNGGSRFSSYSAPYYAPAPFGGGGFYMG 184

Query: 183 PAVGVGLGAGSSFVFILAGFAAFLLVSGFLSDRSDTSVLTASDKTSVLKLQV 232
           PAVGVG+GAGSSF  IL GFAAF+LVSGFLSDRS++SVLTAS++TSV+KLQV
Sbjct: 185 PAVGVGVGAGSSFFLILVGFAAFVLVSGFLSDRSESSVLTASERTSVIKLQV 226

[Close]
BLAST of CSPI01G33800 vs. TrEMBL
Match: M5VZ21_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa005402mg PE=4 SV=1)

HSP 1 Score: 206.1 bits (523), Expect = 4.7e-50
Identity = 138/244 (56.56%), Postives = 166/244 (68.03%), Query Frame = 1 

Query: 1   MVSASLLEPHPLKWNKTFRVHLPSSPSPSTSGRYHLCRPFIVPRNLKIHDSSSVKYPVRC 60
           M +ASLL+P+PLKW                    H   PF++P  L+   +  +K+    
Sbjct: 76  MATASLLQPNPLKWK-------------------HSSCPFLLPP-LRPLPTKPIKF---- 135

Query: 61  FFSEKGRSSTTSISNSS----SVELVNGDKPKSPMEVIGNSIINALKALQKPAIAAVLLG 120
                  SST  +  +S    SV LV  D P +P+E+I + ++NALKAL+KPA+AAVLLG
Sbjct: 136 -------SSTFDVEQASCNFKSVPLVIKDNPANPLELIASKLLNALKALRKPAMAAVLLG 195

Query: 121 LLLMYDPNSALAASGGRVGGNAFSSR---SSSSSRSYSTPRMSSG---FSYSAPYTSPSM 180
           LLLM DPNSALAASGGRVGGN+FSSR   SSSSSRSYS PR SS    FSYSAPY +PS 
Sbjct: 196 LLLMSDPNSALAASGGRVGGNSFSSRSSSSSSSSRSYSVPRTSSSRPDFSYSAPYYAPSP 255

Query: 181 F---GGGGIYVGPAVGVGLGAGSSFVFILAGFAAFLLVSGFLSDRSDTSVLTASDKTSVL 232
           F   GGGG+YVGPA G G+GAGSSF  IL GFAAF+LVSGFLSDRS+ SVLTA++KT+VL
Sbjct: 256 FGFSGGGGVYVGPAFGFGVGAGSSFFLILTGFAAFVLVSGFLSDRSEGSVLTATEKTTVL 288

[Close]
BLAST of CSPI01G33800 vs. TrEMBL
Match: A9PJ10_9ROSI (Putative uncharacterized protein OS=Populus trichocarpa x Populus deltoides PE=2 SV=1)

HSP 1 Score: 204.1 bits (518), Expect = 1.8e-49
Identity = 130/238 (54.62%), Postives = 163/238 (68.49%), Query Frame = 1 

Query: 1   MVSASLLEPHPLKWNKTFRVHLPSSPSPSTSGRYHLCRPFIVPRNLKIHDSSSV-KYPVR 60
           M +ASL+E  PLKW K F    P  P P      H   P+++P       S  + + P+ 
Sbjct: 1   MATASLIESSPLKWKKAF----PFQPQPPLLTPNHY--PYLIPLKPPKFTSKCISQLPIL 60

Query: 61  CFFSEKGRSS---TTSISNSSSVELVNGDKPKSPMEVIGNSIINALKALQKPAIAAVLLG 120
              S+        + SI+   S  L      K+P+E+I  +++ AL  L+KPAIAA+L+G
Sbjct: 61  NPNSKNNNGPFPISPSITKPISQNLSKPPTSKNPLEIIYETMLKALDILKKPAIAAILIG 120

Query: 121 LLLMYDPNSALAASGGRVGGNAFSSRSSS--SSRSYSTPRM-SSGFSYSAPYTSPSMFGG 180
           +LL++DPNSA AASGGR+GGN+FS RSSS  SSRSYS PR  SSGFSYS PY +PS FGG
Sbjct: 121 VLLLHDPNSAFAASGGRIGGNSFSRRSSSEYSSRSYSVPRGGSSGFSYSVPYYAPSPFGG 180

Query: 181 GGIYVGPAVGVGLGAGSSFVFILAGFAAFLLVSGFLSDRSDTSVLTASDKTSVLKLQV 232
           GG+YVGPAVGVG+GAGSS  FILAGFAAF+LVSGFLSDR++  VLTA++KTSVLKLQV
Sbjct: 181 GGVYVGPAVGVGVGAGSSLFFILAGFAAFMLVSGFLSDRNEGGVLTAAEKTSVLKLQV 232

[Close]
BLAST of CSPI01G33800 vs. TAIR10
Match: AT1G54520.1 (AT1G54520.1 unknown protein)

HSP 1 Score: 159.1 bits (401), Expect = 3.4e-39
Identity = 117/238 (49.16%), Postives = 147/238 (61.76%), Query Frame = 1 

Query: 3   SASLLEPHPLKWNKTFRVHLPSSPSPSTSGRYHLCRPFIVPRNLKIHDSSSVKYPVRCFF 62
           S++ LE  P +WN+         P P T   +H     ++  +     S+S++  +   +
Sbjct: 4   SSTFLELTPFQWNQ---------PLPYTQRPHHRT---VLLYSKPQRRSNSIRLQISVKY 63

Query: 63  SEKGRSSTTSISNSSSVELVNGDKPKSPMEVIGNSIINALKALQKPAIAAVLLGLLLMYD 122
            +   SS   + ++ +           P E I   +  AL +L+KPAIAAVLLGLLL YD
Sbjct: 64  KQSTSSSDPDLRSNFN-----------PFEQIAIQVKKALDSLKKPAIAAVLLGLLLFYD 123

Query: 123 PNSALAASGGRVGGNAFSSR----SSSSSRSYSTPRMSS-GFSYS---APYTSPSMFGGG 182
           PNSALAASGGR+GGN+FSSR    SSSSS+SYS PR S+  FSYS   APY  PS FGGG
Sbjct: 124 PNSALAASGGRIGGNSFSSRSRSSSSSSSQSYSVPRTSNPSFSYSARTAPYYGPSPFGGG 183

Query: 183 GIYVGPAVGVGLGAGSSFVFILAGFAAFLLVSGFLSDRS-DTSVLTASDKTSVLKLQV 232
             +VGPAVG G G  SSF  IL GFAAF+LVSGFLSDRS D S+LT + KTSV+KLQV
Sbjct: 184 --FVGPAVGFGFGGFSSFSLILVGFAAFVLVSGFLSDRSQDDSILTDTQKTSVIKLQV 216

[Close]
BLAST of CSPI01G33800 vs. NCBI nr
Match: gi|449449537|ref|XP_004142521.1| (PREDICTED: uncharacterized protein LOC101210275 [Cucumis sativus])

HSP 1 Score: 432.6 bits (1111), Expect = 4.5e-118
Identity = 231/231 (100.00%), Postives = 231/231 (100.00%), Query Frame = 1 

Query: 1   MVSASLLEPHPLKWNKTFRVHLPSSPSPSTSGRYHLCRPFIVPRNLKIHDSSSVKYPVRC 60
           MVSASLLEPHPLKWNKTFRVHLPSSPSPSTSGRYHLCRPFIVPRNLKIHDSSSVKYPVRC
Sbjct: 1   MVSASLLEPHPLKWNKTFRVHLPSSPSPSTSGRYHLCRPFIVPRNLKIHDSSSVKYPVRC 60

Query: 61  FFSEKGRSSTTSISNSSSVELVNGDKPKSPMEVIGNSIINALKALQKPAIAAVLLGLLLM 120
           FFSEKGRSSTTSISNSSSVELVNGDKPKSPMEVIGNSIINALKALQKPAIAAVLLGLLLM
Sbjct: 61  FFSEKGRSSTTSISNSSSVELVNGDKPKSPMEVIGNSIINALKALQKPAIAAVLLGLLLM 120

Query: 121 YDPNSALAASGGRVGGNAFSSRSSSSSRSYSTPRMSSGFSYSAPYTSPSMFGGGGIYVGP 180
           YDPNSALAASGGRVGGNAFSSRSSSSSRSYSTPRMSSGFSYSAPYTSPSMFGGGGIYVGP
Sbjct: 121 YDPNSALAASGGRVGGNAFSSRSSSSSRSYSTPRMSSGFSYSAPYTSPSMFGGGGIYVGP 180

Query: 181 AVGVGLGAGSSFVFILAGFAAFLLVSGFLSDRSDTSVLTASDKTSVLKLQV 232
           AVGVGLGAGSSFVFILAGFAAFLLVSGFLSDRSDTSVLTASDKTSVLKLQV
Sbjct: 181 AVGVGLGAGSSFVFILAGFAAFLLVSGFLSDRSDTSVLTASDKTSVLKLQV 231

[Close]
BLAST of CSPI01G33800 vs. NCBI nr
Match: gi|700211710|gb|KGN66806.1| (hypothetical protein Csa_1G695410 [Cucumis sativus])

HSP 1 Score: 432.6 bits (1111), Expect = 4.5e-118
Identity = 231/231 (100.00%), Postives = 231/231 (100.00%), Query Frame = 1 

Query: 1   MVSASLLEPHPLKWNKTFRVHLPSSPSPSTSGRYHLCRPFIVPRNLKIHDSSSVKYPVRC 60
           MVSASLLEPHPLKWNKTFRVHLPSSPSPSTSGRYHLCRPFIVPRNLKIHDSSSVKYPVRC
Sbjct: 1   MVSASLLEPHPLKWNKTFRVHLPSSPSPSTSGRYHLCRPFIVPRNLKIHDSSSVKYPVRC 60

Query: 61  FFSEKGRSSTTSISNSSSVELVNGDKPKSPMEVIGNSIINALKALQKPAIAAVLLGLLLM 120
           FFSEKGRSSTTSISNSSSVELVNGDKPKSPMEVIGNSIINALKALQKPAIAAVLLGLLLM
Sbjct: 61  FFSEKGRSSTTSISNSSSVELVNGDKPKSPMEVIGNSIINALKALQKPAIAAVLLGLLLM 120

Query: 121 YDPNSALAASGGRVGGNAFSSRSSSSSRSYSTPRMSSGFSYSAPYTSPSMFGGGGIYVGP 180
           YDPNSALAASGGRVGGNAFSSRSSSSSRSYSTPRMSSGFSYSAPYTSPSMFGGGGIYVGP
Sbjct: 121 YDPNSALAASGGRVGGNAFSSRSSSSSRSYSTPRMSSGFSYSAPYTSPSMFGGGGIYVGP 180

Query: 181 AVGVGLGAGSSFVFILAGFAAFLLVSGFLSDRSDTSVLTASDKTSVLKLQV 232
           AVGVGLGAGSSFVFILAGFAAFLLVSGFLSDRSDTSVLTASDKTSVLKLQV
Sbjct: 181 AVGVGLGAGSSFVFILAGFAAFLLVSGFLSDRSDTSVLTASDKTSVLKLQV 231

[Close]
BLAST of CSPI01G33800 vs. NCBI nr
Match: gi|659131254|ref|XP_008465590.1| (PREDICTED: uncharacterized protein LOC103503226 [Cucumis melo])

HSP 1 Score: 400.6 bits (1028), Expect = 1.9e-108
Identity = 216/231 (93.51%), Postives = 222/231 (96.10%), Query Frame = 1 

Query: 1   MVSASLLEPHPLKWNKTFRVHLPSSPSPSTSGRYHLCRPFIVPRNLKIHDSSSVKYPVRC 60
           MVSASLLEPHPLKWNKTF +H  SSPSPSTSGRYHL RPFIVPRNLKIHDSSSVK  VRC
Sbjct: 1   MVSASLLEPHPLKWNKTFPLHFASSPSPSTSGRYHLYRPFIVPRNLKIHDSSSVKSRVRC 60

Query: 61  FFSEKGRSSTTSISNSSSVELVNGDKPKSPMEVIGNSIINALKALQKPAIAAVLLGLLLM 120
           FFSEKGRSSTT+ISNS SVELVNGDKPKSPMEVIGNSIINALK L+KPAIAAVLLGLLLM
Sbjct: 61  FFSEKGRSSTTTISNSCSVELVNGDKPKSPMEVIGNSIINALKTLRKPAIAAVLLGLLLM 120

Query: 121 YDPNSALAASGGRVGGNAFSSRSSSSSRSYSTPRMSSGFSYSAPYTSPSMFGGGGIYVGP 180
           YDPNSALAASGGRVGGNAFSSRSSSSSRSYSTPRMSSGFSYSAPYTSPSMFGGGGIYVGP
Sbjct: 121 YDPNSALAASGGRVGGNAFSSRSSSSSRSYSTPRMSSGFSYSAPYTSPSMFGGGGIYVGP 180

Query: 181 AVGVGLGAGSSFVFILAGFAAFLLVSGFLSDRSDTSVLTASDKTSVLKLQV 232
           AVGVG+GAGSSF FILAGFAAFLLVSGFLSDRSD+SVLTAS+KTSVLKLQV
Sbjct: 181 AVGVGVGAGSSFFFILAGFAAFLLVSGFLSDRSDSSVLTASEKTSVLKLQV 231

[Close]
BLAST of CSPI01G33800 vs. NCBI nr
Match: gi|1009117523|ref|XP_015875363.1| (PREDICTED: uncharacterized protein LOC107412168 [Ziziphus jujuba])

HSP 1 Score: 214.2 bits (544), Expect = 2.5e-52
Identity = 140/238 (58.82%), Postives = 168/238 (70.59%), Query Frame = 1 

Query: 1   MVSASLL-EPHPLKWNKTFRVHLPSSPSPSTSGRYHLCRPFIVPRNLKIHDSSSVKYPVR 60
           M +ASLL E +PL+W ++F + LP         ++ L +P  +    K+   S  K+ VR
Sbjct: 1   MAAASLLLEANPLRWKQSFPILLPRR-------KFCLVQPAKLNGGFKVEQVSG-KFSVR 60

Query: 61  CFFSEKGRSSTTSISNSSSVELVNGDKPKSPMEVIGNSIINALKALQKPAIAAVLLGLLL 120
           CF + K       + N S   L +    ++P E++ ++I+ ALKAL+KPAIA VLLGLLL
Sbjct: 61  CFSASK--KHLLGLDNCSG--LASKQNRRNPFEIVADTIVKALKALRKPAIAVVLLGLLL 120

Query: 121 MYDPNSALAASGGRVGGNAFSSRSSSSS-RSYSTPRMSS-GFSYSAPYTSPSMFG----G 180
           MYDPNSALAASGGRVGG AFSSRSSSSS RSYS PR SS GFSYS PY +PS FG    G
Sbjct: 121 MYDPNSALAASGGRVGGKAFSSRSSSSSSRSYSVPRTSSPGFSYSVPYYAPSPFGFGGGG 180

Query: 181 GGIYVGPAVGVGLGAGSSFVFILAGFAAFLLVSGFLSDRSDTSVLTASDKTSVLKLQV 232
           GG YVGPA GVG+GAGSSF  IL GFAAF+LVSGFLSDRSD SVLTA++KTSVLKLQV
Sbjct: 181 GGFYVGPAFGVGVGAGSSFFLILVGFAAFVLVSGFLSDRSDGSVLTATEKTSVLKLQV 226

[Close]
BLAST of CSPI01G33800 vs. NCBI nr
Match: gi|1000981269|ref|XP_015570668.1| (PREDICTED: uncharacterized protein LOC8288423 isoform X2 [Ricinus communis])

HSP 1 Score: 212.6 bits (540), Expect = 7.2e-52
Identity = 135/242 (55.79%), Postives = 166/242 (68.60%), Query Frame = 1 

Query: 1   MVSASLLEPHPLKWNKTFRV-------HLPSSPSPSTSGRYHLCRPFIVPRNLKIHDSSS 60
           M SA LL+  PLKW +TF          LP +P  S  G       F   + L +   + 
Sbjct: 1   MASAPLLQSTPLKWKQTFPFLDLSPPRSLPFNPLKSGLG-------FKYNQTLTMKGRNF 60

Query: 61  VKYPVRCFFSEKGRSSTTSISNSSSVELVNGDKPK--SPMEVIGNSIINALKALQKPAIA 120
            K+ ++C F++K     T + N+S+V + N +     +P ++I N+ I  L  L+KPAIA
Sbjct: 61  TKFSLKCSFTDK---HLTHLKNNSNVPICNSNSTSGTNPFDIIYNTFIRTLNFLKKPAIA 120

Query: 121 AVLLGLLLMYDPNSALAASGGRVGGNAFS-SRSSSSSRSYSTPRMSS-GFSYSAPYTSPS 180
           A+L+G LLMYDPNSA AASGGR+GG +FS S SSSSSRSYS PR SS GFSYS PY +PS
Sbjct: 121 AILVGALLMYDPNSAFAASGGRMGGRSFSRSSSSSSSRSYSVPRSSSPGFSYSVPYYAPS 180

Query: 181 MFGGGGIYVGPAVGVGLGAGSSFVFILAGFAAFLLVSGFLSDRSDTSVLTASDKTSVLKL 232
            FGGGG+YVGPAVGVG+GAGSS  FILAGFAAF+LVSGFLSDRS+  VLTA+DKTSVLKL
Sbjct: 181 PFGGGGLYVGPAVGVGVGAGSSLFFILAGFAAFMLVSGFLSDRSEGGVLTATDKTSVLKL 232

The following BLAST results are available for this feature:
BLAST of CSPI01G33800 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CSPI01G33800 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0M3K0_CUCSA3.1e-118100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_1G695410 PE=4 SV=1[more]
A0A067JUH0_JATCU1.1e-5156.85Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23463 PE=4 SV=1[more]
A0A0D2R115_GOSRA1.6e-5056.03Uncharacterized protein (Fragment) OS=Gossypium raimondii GN=B456_007G2854001 PE... [more]
M5VZ21_PRUPE4.7e-5056.56Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa005402mg PE=4 SV=1[more]
A9PJ10_9ROSI1.8e-4954.62Putative uncharacterized protein OS=Populus trichocarpa x Populus deltoides PE=2... [more]
BLAST of CSPI01G33800 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G54520.13.4e-3949.16 unknown protein[more]
BLAST of CSPI01G33800 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449449537|ref|XP_004142521.1|4.5e-118100.00PREDICTED: uncharacterized protein LOC101210275 [Cucumis sativus][more]
gi|700211710|gb|KGN66806.1|4.5e-118100.00hypothetical protein Csa_1G695410 [Cucumis sativus][more]
gi|659131254|ref|XP_008465590.1|1.9e-10893.51PREDICTED: uncharacterized protein LOC103503226 [Cucumis melo][more]
gi|1009117523|ref|XP_015875363.1|2.5e-5258.82PREDICTED: uncharacterized protein LOC107412168 [Ziziphus jujuba][more]
gi|1000981269|ref|XP_015570668.1|7.2e-5255.79PREDICTED: uncharacterized protein LOC8288423 isoform X2 [Ricinus communis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR010903DUF1517
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
cellular_component GO:0009507 chloroplast
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI01G33800.1CSPI01G33800.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR010903Protein of unknown function DUF1517PFAMPF07466DUF1517coord: 128..231
score: 4.6
NoneNo IPR availablePANTHERPTHR33975FAMILY NOT NAMEDcoord: 88..231
score: 8.4
NoneNo IPR availablePANTHERPTHR33975:SF2SUBFAMILY NOT NAMEDcoord: 88..231
score: 8.4

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CSPI01G33800Cla003763Watermelon (97103) v1cpiwmB093
CSPI01G33800Csa1G695410Cucumber (Chinese Long) v2cpicuB001
CSPI01G33800Cla97C06G118890Watermelon (97103) v2cpiwmbB083
CSPI01G33800Cucsa.332320Cucumber (Gy14) v1cgycpiB496
CSPI01G33800CmoCh11G010140Cucurbita moschata (Rifu)cmocpiB083
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CSPI01G33800Cucumber (Gy14) v2cgybcpiB002
CSPI01G33800Silver-seed gourdcarcpiB0948
CSPI01G33800Cucumber (Chinese Long) v3cpicucB000
CSPI01G33800Watermelon (97103) v2cpiwmbB076
CSPI01G33800Wax gourdcpiwgoB094
CSPI01G33800Wax gourdcpiwgoB112
CSPI01G33800Cucurbita maxima (Rimu)cmacpiB090
CSPI01G33800Melon (DHL92) v3.5.1cpimeB045
CSPI01G33800Watermelon (Charleston Gray)cpiwcgB078
CSPI01G33800Watermelon (Charleston Gray)cpiwcgB087
CSPI01G33800Cucurbita pepo (Zucchini)cpecpiB644
CSPI01G33800Bottle gourd (USVL1VR-Ls)cpilsiB059
CSPI01G33800Bottle gourd (USVL1VR-Ls)cpilsiB079
CSPI01G33800Melon (DHL92) v3.6.1cpimedB039