CmoCh11G009020 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh11G009020
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionProtein involved in intra-Golgi vesicle-mediated transport
LocationCmo_Chr11 : 4624146 .. 4629428 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGCATGGAGAGCGAACCAAGATTGAAGAAGCGATTAGAGGTAGAAGAATCCTGCTGGGGCTGCCGGAGACCACATGTCGTTGCACTTAGTAAGTGTCTCGTGATATGTGTTCTCAGGTCGCCCCTGTAGGCTTCTTGTCTACCGTTTTTATGTTTTCAATTCAGAGTGGATTGAGTTCATTTATGGTTTCCTCTTCCTTGCACACTTCCTATCTTCCGTTTTTATGTTTTAGATTCAGAGTGGATCGAGTTCATTTATGGGTACTTCCACTTGCAGACTTATTACTATTTTTATGTTTCAGATTCACAACAGATCGAGTTCATTTATGGGTACCTCTTACTTTCTTTCCTCTACTTTTTTTTCTCTTCTTCGATTCTATCTTACATAGAAGATGTAAGTTTTAGAAATTATAATTTGAAAGGAAAAACGATTTACTTAGGTCCGATTTGATAACAAATTTAAATAGGTTTTTAAAATTTGACTTAGTTTTTAAGACCATAGACGACGAAACAAGAAAATCATAAAAATATAATTAGTATTTATAAACTTAATTTTTTTAAAAGTAAAAGACAATAATTATTTAATCGAACTTTATTCTTTTTGTAAATATTTAATAAAGCTTATTAATTTATAAGCACCGAAGTTAATACTGTAAATGAATAATAAGTGACATTCTACCAATAATATTTTATATAGAATATTAGCTATATGAATTAATGACAGTTGCAATATTAGAAAAAAACTATATTTTCCAATTTGTAAATATAAAATATATAACTTTTTCCTTATTATTTTCTAATTTTATCTTAATTGTGTATCAACATATATATCAATAATATATTTAGAATACTTTATATTTATATTTGGTCATTTAAATACAAAATATAAAATGTAGACGTCATATAATTGATATACTAAATTATACCACTAATATACCAAATCTATTTTCAATATGCTTGTGATACACCATTAAAAGTAAAATTCAAAAAAAAAAAAACATAAAAAATAGATTTTATTATATATATTTTTTTTTTATGTTTTTTTTTTCCTACCTATTATGGTTCTCTTAATTGAATACGACCAATAGTTAACTGGAAACTCATTTTGACTTTGAATTCTTATTTTCTATTTCTCATATTCGATTTTTGAAACATCAAAACGTTTAGTAATTGTTCAATATACATGCTCGAGTTGTAGCATGAGGTTACCATTGATAAAAAAAAAAAAATAATAAATAAAAAATTGAAATACACACGAAGAACATTAATCATAAAGCAAATGTATACACTCAATAAATCATAAATTTTTGAGATAATAAAAAATAATTTAAAATCGAACTACATATAAAACTTTAAAATAAAAGGAAAAACTTACTTTTTAAAAAAGAAACGAGATTAAGGTTTAATTGTGTTTAGCAACTCGAAAATAGTTCACAACTCAACCTAAGCCCTACTTTCTATTTTCAAGGATTTAGTTGTCGGGTTGTTTTTTTAAAATTTAAATATAAACATATACAAGTCATAATGTATCACTTTCTGGTGTGAAAATGCTCACCCCTGTCTTTAGACGAGAAAGCCCAACGATCCATTTATAAGAAAGGCTACAACCCATTGTTATTCTTTTGACAATGAACCACTCTGGTACAACAAGCTAAAGGGACCTCTACGCTTTGTCCTCGGTGCGTAGGGCTGATCCCCGTGTGCTAGAGGGAAGATCGGAAAGTTTGTGTTAAGTAGAAAGAAAGTAGATTTTTGTCTTGTTTAGGCATTTGGTGTCCTTTCGGCCGGCCTGCTTAACGACAGCACTACACATTAGTTACAAATGTGAAAGGGTTGAGTTGTAACTGTATTTTCGTGTTGACACTACCAAAAAAAAAAAAATGTCAATTTAGGAACATCTTTGGTTTACTTATTTATTTTTTCATTAAAAATAGAATTATTAATTAGTTTTCAGGAATGACGCTGTTATTCGTATTAATTTTTTTTATAATTTTCCAAGAACCGTTGCTTGAGCTGATATATTGGTCCGAGCAGCACAAGGTTTTGGCCCAGTAGAGAGCCGTTGGTCTTGCTGATGCCATTCACACAGTAGAGAGCCGTTGGCCAACGAACTTGGTTGATATTCCTTGCATTGCATTGCAATGCACATTCACAGATTCACTTCTCCAAATTCACACAGAAGAAGAAGAATGAGACGTCCAATTCGCCATACCAGAAGTGTTGAAGCTCCCCGGATTTCTGCATTACTTCCTTGATCTCTAAATCTATCTCACAATTACTGTAGAAGCTCTGTGATTCTAGTTTTTGAAAGTGATCGCACTCTTGAACTCGCTGAGCGGCCATATCTGAATTACGCCTTCCCAAACATGGAGTCTCCGCAAGGTGGATCCGATAGGGATAAACCGCCGGACTCTTCCTCGTCCTCTTCTCCCGTCTCCGTCGTTTCCAGTTTCTGGAAAGGTAATAGTCTAATTGTAAATCGGGTTCTCTCTCAATTCTTGCGCTTATTGGTGGGTTTGGACTTCATTATTAACTAGCTTAAGAAAATTACGTGTTCTATGTTATGTTCTGATTCACAGCAGGGGCATTCAATTTCTATGCGTTAGTTTGAATTTTGAGCTCAATTTTATTTAAGAAGACTAGAATTTTTATACTGAGAGGTTCTTGTCCATTGGAGAAAGGTAGTATGTTGCAATGCGAATCGTTGAGTTAAATGGTACTAACGAATATCAAAGGCATTTTGTGCCTTTGGATATGAAGTTCCAATAAGACTATCAATTGCTGTCTGTTTGATTTAAGACTGCCTTGAAAAATTTACCCTCTTCTAACACAAAATGGTCACTGGTTTCCTATTTGCAGAGTTTGATTTAGAGGAGGAGAAAAGTGCATTGGATGAACAAGGACTTAGGATAGCTGAAAACCAAGAAAATAGCCAGAAAAATCGTCGGAAGCTTGCTGAAAGTACAAGAGGTTGTTGCTCATGTCCCCTTCTGTTATTCTTACTATTTTTCCTCTGAAAATATCTTTGCTACAGTTTTAAAATGATTTTAACAGAGAACTCTGACAGATTTCAAGAAGGCTTCACCAGTGGATAAATTGAACTTGTTTAATTCTCTACTTAAAAATTACCAAGAGGAAGTTGACAATCTCACGAAGAGGGCAAAATTTGGAGAAAATTCTTTTCTTAACATCTATCAGAAACTTTATGAGGCTCCTGATCCTTATCCTGCTCTTGCTTCAATTGGTGTAAGTGCCAAATACATTCACATGGGTGTTGCATTTAAGCAGCATCAGTGATTTGAACTTGTGAACATTTTTCTTCTTCATTATACTTTAATGCTACTTAATAGTATGGAACCTCTTTGAAAATATTTTTGTTGTACAATCAGATGTGAGCCTTCAAATTTGGTAGGGTGTGAAATATATTATGACAAAAGAAAAAAAGGAAGAAATATCGAAGTACTAGGATGAACAATGTGGAATGTTTCAGAAAAGTTTCTCCATGTTCTGTATTCACTAATCCATAAATATATACTGAACTTATGAACGATCACGTGAAGTCTGAATTCACTGTCTTCTTGCGTCTCAATGGGGTAATGGAAATGAAGAACCATATTGATATGTTTTGTATTAAACCCTGTTGCTTTATGCTATTAGTCATCTTTTAAAGATTTTGCTGCACAACGTTCTCTTTGCAGGAACAAGATTTGAAATTGTCTGAATTAGAATCTAAGAACAAGAAAATGAAAGTTGAGCTTGAGGAGTTTAGAACTGAAGCAACACATTTAAAGAATCAGCAGGCCACAATTAGAAAACTTGGAAGAGCGCAATCGGCAATTGGAGCAACAGGTTACATTTTTTTTTTTGTATGCTGTGATGAATGATGATAATAGTACATTGACATTTTTCCATATAACTAAATGATACGATAACACTATGGAATGGATTGAATATTCTCTCATCAATTTCCAAACCACAACACCTTCAAATCAATTTTGACCAACCGAAGGTTTAGGTTTAGACACAATTCCATTGTTGGACACTTTGAGCTTGGTGGAGGTCCCTTGGTTCATGTCACTAATACTGCTAGTCAGTCTTGAGAGAGTAATATTCTAGTAGTAAACCTTCCACCTGGTATTCTTCATATTGAAAACGGAATTAGCAGAACAACCAAGCCGATTCATGCAGTAAAAAATATATTAAGAAATTGAATAGGACTAGCACATTCAAATTATACAAACAAATCTTGATTTTAGAGAATTAAAATTGGTCACTGGAAAAATTAGGTAGTTAATCATTACACTCTTCCTCGTTTCATCTGTTAATCTTATTTTAGTTGTCTAGATGGAGGAGAAAATTAAGGAAATTGTGGATATCAAGCAACGCAGTCTGGCAGAAGAAAACCAGAAGGCATTAGATGCAATAAAAGAAAGGTACCTTTCCTGTAGGGTTAATGGAATTGAACAAGTGTATATATGAGATATTTAGAATGTAAATGGCAATATCGATTAGATATGATGAAATAGTTTTGTGGGGATACATAGATTTTCTTCTTAAACTCAAATAGAAAATTCTATCAAATTAAAATGTTCTTAGTTTTGTTAGTATCTAATAAAGGAAAAGCTTCTATGATTCCCTCTTGTCACAATGGAGCAGATTTATTTTTATTCTTACTATTATTGCAATTATTCTATGATAGGACATTATTTTGTATCGATATCATACATCGAGAATTGATTTCTTTTTCCCATTTAGGAAAAAAAAAAAAAAAGAAGAAGAAGAAGAAGAAGGAAATTTCTATGATTGTTCGTACTTTCTAAATTTTGTACCGAGCCAATATCAAACTAAACTATCTTCCATATTGATATTGATGTTAAAAATTGAAGCAAAGAATACTGAGTATAGATCCTTAATAATTTAATATTTTCTTCATTTTTGGGTCATATGTGGAAAAATAATCTCAAGTTACATTGGGTTTTTTTATGGTAGTGCCTCGTTCTCAGTCATTGATGGTAAACTTTCTTTTTTAAACCTTACCTTGTATTAAACTGTGATTTTTTTTTAATAATGTTTAGGGAGAGATTGTTACAAGATCAACTAAGACGTGAACAAGAAAGTGTTTCAAAAAAAGCTACATGAACGTGCCCAGAGTCAATTGTTTGAACTTCGTGCTCAATCAGGTGAATGTGCATGTTTGTAGTATATGGTTTAGATTGCATATTTAACCAAAAACACTGGCAATCTCTTAAATAAAGTTCTCATCTCTTATACTTTCCTTCAG

mRNA sequence

ATGGGCATGGAGAGCGAACCAAGATTGAAGAAGCGATTAGAGGTAGAAGAATCCTGCTGGGGCTGCCGGAGACCACATGTCGTTGCACTTATTTTTGAAAGTGATCGCACTCTTGAACTCGCTGAGCGGCCATATCTGAATTACGCCTTCCCAAACATGGAGTCTCCGCAAGGTGGATCCGATAGGGATAAACCGCCGGACTCTTCCTCGTCCTCTTCTCCCGTCTCCGTCGTTTCCAGTTTCTGGAAAGAGTTTGATTTAGAGGAGGAGAAAAGTGCATTGGATGAACAAGGACTTAGGATAGCTGAAAACCAAGAAAATAGCCAGAAAAATCGTCGGAAGCTTGCTGAAAGTACAAGAGATTTCAAGAAGGCTTCACCAGTGGATAAATTGAACTTGTTTAATTCTCTACTTAAAAATTACCAAGAGGAAGTTGACAATCTCACGAAGAGGGCAAAATTTGGAGAAAATTCTTTTCTTAACATCTATCAGAAACTTTATGAGGCTCCTGATCCTTATCCTGCTCTTGCTTCAATTGGTGAACAAGATTTGAAATTGTCTGAATTAGAATCTAAGAACAAGAAAATGAAAGTTGAGCTTGAGGAGTTTAGAACTGAAGCAACACATTTAAAGAATCAGCAGGCCACAATTAGAAAACTTGGAAGAGCGCAATCGGCAATTGGAGCAACAGATGGAGGAGAAAATTAAGGAAATTGTGGATATCAAGCAACGCAGTCTGGCAGAAGAAAACCAGAAGGCATTAGATGCAATAAAAGAAAGGGAGAGATTGTTACAAGATCAACTAAGACGTGAACAAGAAAGTGTTTCAAAAAAAGCTACATGAACGTGCCCAGAGTCAATTGTTTGAACTTCGTGCTCAATCAGGTGAATGTGCATGTTTGTAGTATATGGTTTAGATTGCATATTTAACCAAAAACACTGGCAATCTCTTAAATAAAGTTCTCATCTCTTATACTTTCCTTCAG

Coding sequence (CDS)

ATGGGCATGGAGAGCGAACCAAGATTGAAGAAGCGATTAGAGGTAGAAGAATCCTGCTGGGGCTGCCGGAGACCACATGTCGTTGCACTTATTTTTGAAAGTGATCGCACTCTTGAACTCGCTGAGCGGCCATATCTGAATTACGCCTTCCCAAACATGGAGTCTCCGCAAGGTGGATCCGATAGGGATAAACCGCCGGACTCTTCCTCGTCCTCTTCTCCCGTCTCCGTCGTTTCCAGTTTCTGGAAAGAGTTTGATTTAGAGGAGGAGAAAAGTGCATTGGATGAACAAGGACTTAGGATAGCTGAAAACCAAGAAAATAGCCAGAAAAATCGTCGGAAGCTTGCTGAAAGTACAAGAGATTTCAAGAAGGCTTCACCAGTGGATAAATTGAACTTGTTTAATTCTCTACTTAAAAATTACCAAGAGGAAGTTGACAATCTCACGAAGAGGGCAAAATTTGGAGAAAATTCTTTTCTTAACATCTATCAGAAACTTTATGAGGCTCCTGATCCTTATCCTGCTCTTGCTTCAATTGGTGAACAAGATTTGAAATTGTCTGAATTAGAATCTAAGAACAAGAAAATGAAAGTTGAGCTTGAGGAGTTTAGAACTGAAGCAACACATTTAAAGAATCAGCAGGCCACAATTAGAAAACTTGGAAGAGCGCAATCGGCAATTGGAGCAACAGATGGAGGAGAAAATTAA
Homology
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BLAST of CmoCh11G009020 vs. Swiss-Prot
Match: CASP_ARATH (Protein CASP OS=Arabidopsis thaliana GN=CASP PE=1 SV=2)

HSP 1 Score: 267.7 bits (683), Expect = 1.2e-70
Identity = 142/171 (83.04%), Postives = 157/171 (91.81%), Query Frame = 1 

Query: 53  MESPQGGSDRDKPP---DSSSSSSPVSVVSSFWKEFDLEEEKSALDEQGLRIAENQENSQ 112
           ME  Q GS+RDK P    SSSSSSP+ VV++FWKEFDLE+EKS LDEQGLRIAENQENSQ
Sbjct: 1   MEVSQDGSERDKTPPPSSSSSSSSPIPVVTNFWKEFDLEKEKSLLDEQGLRIAENQENSQ 60

Query: 113 KNRRKLAESTRDFKKASPVDKLNLFNSLLKNYQEEVDNLTKRAKFGENSFLNIYQKLYEA 172
           KNRRKLAESTRDFKKASP +KL++FNSLLK YQEEVDN+TKRAKFGEN+FLNIYQKLYEA
Sbjct: 61  KNRRKLAESTRDFKKASPENKLSMFNSLLKGYQEEVDNITKRAKFGENAFLNIYQKLYEA 120

Query: 173 PDPYPALASIGEQDLKLSELESKNKKMKVELEEFRTEATHLKNQQATIRKL 221
           PDP+PALASI EQD KLSE+ES+N+KMKVELEEFRTEATHLKNQQATIR+L
Sbjct: 121 PDPFPALASIAEQDRKLSEVESENRKMKVELEEFRTEATHLKNQQATIRRL 171

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BLAST of CmoCh11G009020 vs. Swiss-Prot
Match: CASP_MOUSE (Protein CASP OS=Mus musculus GN=Cux1 PE=1 SV=2)

HSP 1 Score: 107.5 bits (267), Expect = 2.1e-22
Identity = 59/150 (39.33%), Postives = 99/150 (66.00%), Query Frame = 1 

Query: 75  VSVVSSFWKEFDLEEEKSALDEQGLRIAENQENSQKNRRKLAESTRDFKKASPVDKLNLF 134
           V  +S +WK FDL++ +  LD     +A  Q+ S+++R++L E +R+FKK +P D     
Sbjct: 5   VGSMSQYWKRFDLQQLQRELDAAATVLANRQDESEQSRKRLIEQSREFKKNTPEDLRKQV 64

Query: 135 NSLLKNYQEEVDNLTKRAKFGENSFLNIYQKLYEAPDPYPALASIGEQ-DLK---LSELE 194
             LLK++Q E+D L+KR+K  E +FL +Y++L + PDP PAL  +G+Q ++K   L ++E
Sbjct: 65  APLLKSFQGEIDALSKRSKEAEAAFLTVYKRLIDVPDPVPAL-DVGQQLEIKVQRLHDIE 124

Query: 195 SKNKKMKVELEEFRTEATHLKNQQATIRKL 221
           ++N+K++  LEE+  E   +KNQ+ TI+ L
Sbjct: 125 TENQKLRETLEEYNKEFAEVKNQEVTIKAL 153

[Close]
BLAST of CmoCh11G009020 vs. Swiss-Prot
Match: CASP_HUMAN (Protein CASP OS=Homo sapiens GN=CUX1 PE=1 SV=2)

HSP 1 Score: 107.1 bits (266), Expect = 2.7e-22
Identity = 60/150 (40.00%), Postives = 98/150 (65.33%), Query Frame = 1 

Query: 75  VSVVSSFWKEFDLEEEKSALDEQGLRIAENQENSQKNRRKLAESTRDFKKASPVDKLNLF 134
           V  +  +WK FDL++ +  LD     +A  Q+ S+++R++L E +R+FKK +P D     
Sbjct: 5   VGSMFQYWKRFDLQQLQRELDATATVLANRQDESEQSRKRLIEQSREFKKNTPEDLRKQV 64

Query: 135 NSLLKNYQEEVDNLTKRAKFGENSFLNIYQKLYEAPDPYPALASIGEQ-DLK---LSELE 194
             LLK++Q E+D L+KR+K  E +FLN+Y++L + PDP PAL  +G+Q  LK   L ++E
Sbjct: 65  APLLKSFQGEIDALSKRSKEAEAAFLNVYKRLIDVPDPVPAL-DLGQQLQLKVQRLHDIE 124

Query: 195 SKNKKMKVELEEFRTEATHLKNQQATIRKL 221
           ++N+K++  LEE+  E   +KNQ+ TI+ L
Sbjct: 125 TENQKLRETLEEYNKEFAEVKNQEVTIKAL 153

[Close]
BLAST of CmoCh11G009020 vs. Swiss-Prot
Match: CASP_PONAB (Protein CASP OS=Pongo abelii GN=CUTL1 PE=2 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 2.7e-22
Identity = 60/150 (40.00%), Postives = 98/150 (65.33%), Query Frame = 1 

Query: 75  VSVVSSFWKEFDLEEEKSALDEQGLRIAENQENSQKNRRKLAESTRDFKKASPVDKLNLF 134
           V  +  +WK FDL++ +  LD     +A  Q+ S+++R++L E +R+FKK +P D     
Sbjct: 5   VGSMFQYWKRFDLQQLQRELDATATVLANRQDESEQSRKRLIEQSREFKKNTPEDLRKQV 64

Query: 135 NSLLKNYQEEVDNLTKRAKFGENSFLNIYQKLYEAPDPYPALASIGEQ-DLK---LSELE 194
             LLK++Q E+D L+KR+K  E +FLN+Y++L + PDP PAL  +G+Q  LK   L ++E
Sbjct: 65  APLLKSFQGEIDALSKRSKEAEAAFLNVYKRLIDVPDPVPAL-DLGQQLQLKVQRLHDIE 124

Query: 195 SKNKKMKVELEEFRTEATHLKNQQATIRKL 221
           ++N+K++  LEE+  E   +KNQ+ TI+ L
Sbjct: 125 TENQKLRETLEEYNKEFAEVKNQEVTIKAL 153

[Close]
BLAST of CmoCh11G009020 vs. Swiss-Prot
Match: CUX1_RAT (Homeobox protein cut-like 1 OS=Rattus norvegicus GN=Cux1 PE=1 SV=2)

HSP 1 Score: 104.8 bits (260), Expect = 1.3e-21
Identity = 58/150 (38.67%), Postives = 98/150 (65.33%), Query Frame = 1 

Query: 75  VSVVSSFWKEFDLEEEKSALDEQGLRIAENQENSQKNRRKLAESTRDFKKASPVDKLNLF 134
           V  +  +WK FDL++ +  LD     +A  Q+ S+++R++L E +R+FKK +P D     
Sbjct: 5   VGSMFQYWKRFDLQQLQRELDATATVLANRQDESEQSRKRLIEQSREFKKNTPEDLRKQV 64

Query: 135 NSLLKNYQEEVDNLTKRAKFGENSFLNIYQKLYEAPDPYPALASIGEQ-DLK---LSELE 194
             LLK++Q E+D L+KR+K  E +FL +Y++L + PDP PAL  +G+Q ++K   L ++E
Sbjct: 65  APLLKSFQGEIDALSKRSKEAEAAFLTVYKRLIDVPDPVPAL-DLGQQLEIKVQRLHDIE 124

Query: 195 SKNKKMKVELEEFRTEATHLKNQQATIRKL 221
           ++N+K++  LEE+  E   +KNQ+ TI+ L
Sbjct: 125 TENQKLRETLEEYNKEFAEVKNQEVTIKAL 153

[Close]
BLAST of CmoCh11G009020 vs. TrEMBL
Match: A0A0A0LXT3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G629150 PE=4 SV=1)

HSP 1 Score: 295.0 bits (754), Expect = 7.8e-77
Identity = 154/168 (91.67%), Postives = 165/168 (98.21%), Query Frame = 1 

Query: 53  MESPQGGSDRDKPPDSSSSSSPVSVVSSFWKEFDLEEEKSALDEQGLRIAENQENSQKNR 112
           MESPQGGS+RDKPP+SSSS+S VSVVSSFWKEFDLE+EKSALDEQGLRIAENQENSQKNR
Sbjct: 1   MESPQGGSERDKPPNSSSSTSAVSVVSSFWKEFDLEKEKSALDEQGLRIAENQENSQKNR 60

Query: 113 RKLAESTRDFKKASPVDKLNLFNSLLKNYQEEVDNLTKRAKFGENSFLNIYQKLYEAPDP 172
           RKLAESTRDFKKA P +KLNLF+SLLK+YQEEVDNLTKRAKFGEN+FLNIYQKLYEAPDP
Sbjct: 61  RKLAESTRDFKKAQPEEKLNLFSSLLKSYQEEVDNLTKRAKFGENAFLNIYQKLYEAPDP 120

Query: 173 YPALASIGEQDLKLSELESKNKKMKVELEEFRTEATHLKNQQATIRKL 221
           YPALASIGEQDLKLSELES+N+KMKVELEEFRTEATHLKNQQATIR+L
Sbjct: 121 YPALASIGEQDLKLSELESENRKMKVELEEFRTEATHLKNQQATIRRL 168

[Close]
BLAST of CmoCh11G009020 vs. TrEMBL
Match: M5VPY4_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa002344mg PE=4 SV=1)

HSP 1 Score: 279.6 bits (714), Expect = 3.4e-72
Identity = 149/168 (88.69%), Postives = 159/168 (94.64%), Query Frame = 1 

Query: 53  MESPQGGSDRDKPPDSSSSSSPVSVVSSFWKEFDLEEEKSALDEQGLRIAENQENSQKNR 112
           ME+PQGGSDRDK   SSSSSSP+SVVS+FWKEFDLE+EKS LDEQGLRIAENQENSQKNR
Sbjct: 1   MEAPQGGSDRDK---SSSSSSPISVVSNFWKEFDLEKEKSVLDEQGLRIAENQENSQKNR 60

Query: 113 RKLAESTRDFKKASPVDKLNLFNSLLKNYQEEVDNLTKRAKFGENSFLNIYQKLYEAPDP 172
           RKLAESTRDFKKASP +KLNLFNSLL+ YQEEVDNLTKRAKFGEN+FLNIYQKLYEAPDP
Sbjct: 61  RKLAESTRDFKKASPEEKLNLFNSLLRGYQEEVDNLTKRAKFGENAFLNIYQKLYEAPDP 120

Query: 173 YPALASIGEQDLKLSELESKNKKMKVELEEFRTEATHLKNQQATIRKL 221
           Y ALAS  EQDLKLSELES+N+KMKVELEEFRTEATHLKNQQATIR+L
Sbjct: 121 YLALASSAEQDLKLSELESENRKMKVELEEFRTEATHLKNQQATIRRL 165

[Close]
BLAST of CmoCh11G009020 vs. TrEMBL
Match: V4VMW9_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10019149mg PE=4 SV=1)

HSP 1 Score: 275.8 bits (704), Expect = 4.9e-71
Identity = 144/168 (85.71%), Postives = 160/168 (95.24%), Query Frame = 1 

Query: 53  MESPQGGSDRDKPPDSSSSSSPVSVVSSFWKEFDLEEEKSALDEQGLRIAENQENSQKNR 112
           ME+P GGSDRDKP  ++SSSSPVSV+S+FWKEFDLE+EKS LDE GL+IAENQENSQKNR
Sbjct: 1   MEAPLGGSDRDKP--NTSSSSPVSVISNFWKEFDLEKEKSLLDELGLKIAENQENSQKNR 60

Query: 113 RKLAESTRDFKKASPVDKLNLFNSLLKNYQEEVDNLTKRAKFGENSFLNIYQKLYEAPDP 172
           RKLAESTRDFKKASP +KL+LFNSLLK YQEEVDNLTKRAKFGEN+FLNIYQKLYEAPDP
Sbjct: 61  RKLAESTRDFKKASPEEKLSLFNSLLKGYQEEVDNLTKRAKFGENAFLNIYQKLYEAPDP 120

Query: 173 YPALASIGEQDLKLSELESKNKKMKVELEEFRTEATHLKNQQATIRKL 221
           YPALASI EQDLKLSELES+N+KMK+ELEE+RTEATHLKNQQ+TIR+L
Sbjct: 121 YPALASIAEQDLKLSELESENRKMKIELEEYRTEATHLKNQQSTIRRL 166

[Close]
BLAST of CmoCh11G009020 vs. TrEMBL
Match: A0A067FEG4_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g005704mg PE=4 SV=1)

HSP 1 Score: 274.6 bits (701), Expect = 1.1e-70
Identity = 143/168 (85.12%), Postives = 160/168 (95.24%), Query Frame = 1 

Query: 53  MESPQGGSDRDKPPDSSSSSSPVSVVSSFWKEFDLEEEKSALDEQGLRIAENQENSQKNR 112
           ME+P GGSDRDKP  ++SSSSPVSV+S+FWK+FDLE+EKS LDE GL+IAENQENSQKNR
Sbjct: 1   MEAPLGGSDRDKP--NTSSSSPVSVISNFWKDFDLEKEKSLLDELGLKIAENQENSQKNR 60

Query: 113 RKLAESTRDFKKASPVDKLNLFNSLLKNYQEEVDNLTKRAKFGENSFLNIYQKLYEAPDP 172
           RKLAESTRDFKKASP +KL+LFNSLLK YQEEVDNLTKRAKFGEN+FLNIYQKLYEAPDP
Sbjct: 61  RKLAESTRDFKKASPEEKLSLFNSLLKGYQEEVDNLTKRAKFGENAFLNIYQKLYEAPDP 120

Query: 173 YPALASIGEQDLKLSELESKNKKMKVELEEFRTEATHLKNQQATIRKL 221
           YPALASI EQDLKLSELES+N+KMK+ELEE+RTEATHLKNQQ+TIR+L
Sbjct: 121 YPALASIAEQDLKLSELESENRKMKIELEEYRTEATHLKNQQSTIRRL 166

[Close]
BLAST of CmoCh11G009020 vs. TrEMBL
Match: A0A067FAW8_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g005704mg PE=4 SV=1)

HSP 1 Score: 274.6 bits (701), Expect = 1.1e-70
Identity = 143/168 (85.12%), Postives = 160/168 (95.24%), Query Frame = 1 

Query: 53  MESPQGGSDRDKPPDSSSSSSPVSVVSSFWKEFDLEEEKSALDEQGLRIAENQENSQKNR 112
           ME+P GGSDRDKP  ++SSSSPVSV+S+FWK+FDLE+EKS LDE GL+IAENQENSQKNR
Sbjct: 1   MEAPLGGSDRDKP--NTSSSSPVSVISNFWKDFDLEKEKSLLDELGLKIAENQENSQKNR 60

Query: 113 RKLAESTRDFKKASPVDKLNLFNSLLKNYQEEVDNLTKRAKFGENSFLNIYQKLYEAPDP 172
           RKLAESTRDFKKASP +KL+LFNSLLK YQEEVDNLTKRAKFGEN+FLNIYQKLYEAPDP
Sbjct: 61  RKLAESTRDFKKASPEEKLSLFNSLLKGYQEEVDNLTKRAKFGENAFLNIYQKLYEAPDP 120

Query: 173 YPALASIGEQDLKLSELESKNKKMKVELEEFRTEATHLKNQQATIRKL 221
           YPALASI EQDLKLSELES+N+KMK+ELEE+RTEATHLKNQQ+TIR+L
Sbjct: 121 YPALASIAEQDLKLSELESENRKMKIELEEYRTEATHLKNQQSTIRRL 166

[Close]
BLAST of CmoCh11G009020 vs. TAIR10
Match: AT3G18480.1 (AT3G18480.1 CCAAT-displacement protein alternatively spliced product)

HSP 1 Score: 267.7 bits (683), Expect = 6.8e-72
Identity = 142/171 (83.04%), Postives = 157/171 (91.81%), Query Frame = 1 

Query: 53  MESPQGGSDRDKPP---DSSSSSSPVSVVSSFWKEFDLEEEKSALDEQGLRIAENQENSQ 112
           ME  Q GS+RDK P    SSSSSSP+ VV++FWKEFDLE+EKS LDEQGLRIAENQENSQ
Sbjct: 1   MEVSQDGSERDKTPPPSSSSSSSSPIPVVTNFWKEFDLEKEKSLLDEQGLRIAENQENSQ 60

Query: 113 KNRRKLAESTRDFKKASPVDKLNLFNSLLKNYQEEVDNLTKRAKFGENSFLNIYQKLYEA 172
           KNRRKLAESTRDFKKASP +KL++FNSLLK YQEEVDN+TKRAKFGEN+FLNIYQKLYEA
Sbjct: 61  KNRRKLAESTRDFKKASPENKLSMFNSLLKGYQEEVDNITKRAKFGENAFLNIYQKLYEA 120

Query: 173 PDPYPALASIGEQDLKLSELESKNKKMKVELEEFRTEATHLKNQQATIRKL 221
           PDP+PALASI EQD KLSE+ES+N+KMKVELEEFRTEATHLKNQQATIR+L
Sbjct: 121 PDPFPALASIAEQDRKLSEVESENRKMKVELEEFRTEATHLKNQQATIRRL 171

[Close]
BLAST of CmoCh11G009020 vs. NCBI nr
Match: gi|778663846|ref|XP_011660168.1| (PREDICTED: protein CASP [Cucumis sativus])

HSP 1 Score: 295.0 bits (754), Expect = 1.1e-76
Identity = 154/168 (91.67%), Postives = 165/168 (98.21%), Query Frame = 1 

Query: 53  MESPQGGSDRDKPPDSSSSSSPVSVVSSFWKEFDLEEEKSALDEQGLRIAENQENSQKNR 112
           MESPQGGS+RDKPP+SSSS+S VSVVSSFWKEFDLE+EKSALDEQGLRIAENQENSQKNR
Sbjct: 1   MESPQGGSERDKPPNSSSSTSAVSVVSSFWKEFDLEKEKSALDEQGLRIAENQENSQKNR 60

Query: 113 RKLAESTRDFKKASPVDKLNLFNSLLKNYQEEVDNLTKRAKFGENSFLNIYQKLYEAPDP 172
           RKLAESTRDFKKA P +KLNLF+SLLK+YQEEVDNLTKRAKFGEN+FLNIYQKLYEAPDP
Sbjct: 61  RKLAESTRDFKKAQPEEKLNLFSSLLKSYQEEVDNLTKRAKFGENAFLNIYQKLYEAPDP 120

Query: 173 YPALASIGEQDLKLSELESKNKKMKVELEEFRTEATHLKNQQATIRKL 221
           YPALASIGEQDLKLSELES+N+KMKVELEEFRTEATHLKNQQATIR+L
Sbjct: 121 YPALASIGEQDLKLSELESENRKMKVELEEFRTEATHLKNQQATIRRL 168

[Close]
BLAST of CmoCh11G009020 vs. NCBI nr
Match: gi|659098871|ref|XP_008450331.1| (PREDICTED: LOW QUALITY PROTEIN: protein CASP [Cucumis melo])

HSP 1 Score: 295.0 bits (754), Expect = 1.1e-76
Identity = 154/168 (91.67%), Postives = 165/168 (98.21%), Query Frame = 1 

Query: 53  MESPQGGSDRDKPPDSSSSSSPVSVVSSFWKEFDLEEEKSALDEQGLRIAENQENSQKNR 112
           MESPQGGS+RDKPP+SSSS+S VSVVSSFWKEFDLE+EKSALDEQGLRIAENQENSQKNR
Sbjct: 1   MESPQGGSERDKPPNSSSSTSAVSVVSSFWKEFDLEKEKSALDEQGLRIAENQENSQKNR 60

Query: 113 RKLAESTRDFKKASPVDKLNLFNSLLKNYQEEVDNLTKRAKFGENSFLNIYQKLYEAPDP 172
           RKLAESTRDFKKA P +KLNLF+SLLK+YQEEVDNLTKRAKFGEN+FLNIYQKLYEAPDP
Sbjct: 61  RKLAESTRDFKKAQPEEKLNLFSSLLKSYQEEVDNLTKRAKFGENAFLNIYQKLYEAPDP 120

Query: 173 YPALASIGEQDLKLSELESKNKKMKVELEEFRTEATHLKNQQATIRKL 221
           YPALASIGEQDLKLSELES+N+KMKVELEEFRTEATHLKNQQATIR+L
Sbjct: 121 YPALASIGEQDLKLSELESENRKMKVELEEFRTEATHLKNQQATIRRL 168

[Close]
BLAST of CmoCh11G009020 vs. NCBI nr
Match: gi|645262474|ref|XP_008236778.1| (PREDICTED: protein CASP [Prunus mume])

HSP 1 Score: 279.6 bits (714), Expect = 4.9e-72
Identity = 149/168 (88.69%), Postives = 159/168 (94.64%), Query Frame = 1 

Query: 53  MESPQGGSDRDKPPDSSSSSSPVSVVSSFWKEFDLEEEKSALDEQGLRIAENQENSQKNR 112
           ME+PQGGSDRDK   SSSSSSP+SVVS+FWKEFDLE+EKS LDEQGLRIAENQENSQKNR
Sbjct: 1   MEAPQGGSDRDK---SSSSSSPISVVSNFWKEFDLEKEKSVLDEQGLRIAENQENSQKNR 60

Query: 113 RKLAESTRDFKKASPVDKLNLFNSLLKNYQEEVDNLTKRAKFGENSFLNIYQKLYEAPDP 172
           RKLAESTRDFKKASP +KLNLFNSLL+ YQEEVDNLTKRAKFGEN+FLNIYQKLYEAPDP
Sbjct: 61  RKLAESTRDFKKASPEEKLNLFNSLLRGYQEEVDNLTKRAKFGENAFLNIYQKLYEAPDP 120

Query: 173 YPALASIGEQDLKLSELESKNKKMKVELEEFRTEATHLKNQQATIRKL 221
           Y ALAS  EQDLKLSELES+N+KMKVELEEFRTEATHLKNQQATIR+L
Sbjct: 121 YLALASSAEQDLKLSELESENRKMKVELEEFRTEATHLKNQQATIRRL 165

[Close]
BLAST of CmoCh11G009020 vs. NCBI nr
Match: gi|595801252|ref|XP_007201797.1| (hypothetical protein PRUPE_ppa002344mg [Prunus persica])

HSP 1 Score: 279.6 bits (714), Expect = 4.9e-72
Identity = 149/168 (88.69%), Postives = 159/168 (94.64%), Query Frame = 1 

Query: 53  MESPQGGSDRDKPPDSSSSSSPVSVVSSFWKEFDLEEEKSALDEQGLRIAENQENSQKNR 112
           ME+PQGGSDRDK   SSSSSSP+SVVS+FWKEFDLE+EKS LDEQGLRIAENQENSQKNR
Sbjct: 1   MEAPQGGSDRDK---SSSSSSPISVVSNFWKEFDLEKEKSVLDEQGLRIAENQENSQKNR 60

Query: 113 RKLAESTRDFKKASPVDKLNLFNSLLKNYQEEVDNLTKRAKFGENSFLNIYQKLYEAPDP 172
           RKLAESTRDFKKASP +KLNLFNSLL+ YQEEVDNLTKRAKFGEN+FLNIYQKLYEAPDP
Sbjct: 61  RKLAESTRDFKKASPEEKLNLFNSLLRGYQEEVDNLTKRAKFGENAFLNIYQKLYEAPDP 120

Query: 173 YPALASIGEQDLKLSELESKNKKMKVELEEFRTEATHLKNQQATIRKL 221
           Y ALAS  EQDLKLSELES+N+KMKVELEEFRTEATHLKNQQATIR+L
Sbjct: 121 YLALASSAEQDLKLSELESENRKMKVELEEFRTEATHLKNQQATIRRL 165

[Close]
BLAST of CmoCh11G009020 vs. NCBI nr
Match: gi|225455880|ref|XP_002275327.1| (PREDICTED: protein CASP [Vitis vinifera])

HSP 1 Score: 279.3 bits (713), Expect = 6.4e-72
Identity = 146/168 (86.90%), Postives = 159/168 (94.64%), Query Frame = 1 

Query: 53  MESPQGGSDRDKPPDSSSSSSPVSVVSSFWKEFDLEEEKSALDEQGLRIAENQENSQKNR 112
           ME+PQGGSDRDKP    +SSSP+ VVS+FW+EFDLE+E+S LDEQGLRIAENQENSQKNR
Sbjct: 1   MEAPQGGSDRDKP--MPASSSPIPVVSNFWREFDLEKERSVLDEQGLRIAENQENSQKNR 60

Query: 113 RKLAESTRDFKKASPVDKLNLFNSLLKNYQEEVDNLTKRAKFGENSFLNIYQKLYEAPDP 172
           RKLAESTRDFKKASP +KLNLFNSLLK YQEEVDNLTKRAKFGEN+FLNIYQKLYEAPDP
Sbjct: 61  RKLAESTRDFKKASPDEKLNLFNSLLKGYQEEVDNLTKRAKFGENAFLNIYQKLYEAPDP 120

Query: 173 YPALASIGEQDLKLSELESKNKKMKVELEEFRTEATHLKNQQATIRKL 221
           YPALASI EQD+KLSELES+N+KMKVELEEFRTEATHLKNQQATIR+L
Sbjct: 121 YPALASIAEQDMKLSELESENRKMKVELEEFRTEATHLKNQQATIRRL 166

The following BLAST results are available for this feature:
BLAST of CmoCh11G009020 vs. Swiss-Prot
Match NameE-valueIdentityDescription
CASP_ARATH1.2e-7083.04Protein CASP OS=Arabidopsis thaliana GN=CASP PE=1 SV=2[more]
CASP_MOUSE2.1e-2239.33Protein CASP OS=Mus musculus GN=Cux1 PE=1 SV=2[more]
CASP_HUMAN2.7e-2240.00Protein CASP OS=Homo sapiens GN=CUX1 PE=1 SV=2[more]
CASP_PONAB2.7e-2240.00Protein CASP OS=Pongo abelii GN=CUTL1 PE=2 SV=1[more]
CUX1_RAT1.3e-2138.67Homeobox protein cut-like 1 OS=Rattus norvegicus GN=Cux1 PE=1 SV=2[more]
BLAST of CmoCh11G009020 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LXT3_CUCSA7.8e-7791.67Uncharacterized protein OS=Cucumis sativus GN=Csa_1G629150 PE=4 SV=1[more]
M5VPY4_PRUPE3.4e-7288.69Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa002344mg PE=4 SV=1[more]
V4VMW9_9ROSI4.9e-7185.71Uncharacterized protein OS=Citrus clementina GN=CICLE_v10019149mg PE=4 SV=1[more]
A0A067FEG4_CITSI1.1e-7085.12Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g005704mg PE=4 SV=1[more]
A0A067FAW8_CITSI1.1e-7085.12Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g005704mg PE=4 SV=1[more]
BLAST of CmoCh11G009020 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G18480.16.8e-7283.04 CCAAT-displacement protein alternatively spliced product[more]
BLAST of CmoCh11G009020 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778663846|ref|XP_011660168.1|1.1e-7691.67PREDICTED: protein CASP [Cucumis sativus][more]
gi|659098871|ref|XP_008450331.1|1.1e-7691.67PREDICTED: LOW QUALITY PROTEIN: protein CASP [Cucumis melo][more]
gi|645262474|ref|XP_008236778.1|4.9e-7288.69PREDICTED: protein CASP [Prunus mume][more]
gi|595801252|ref|XP_007201797.1|4.9e-7288.69hypothetical protein PRUPE_ppa002344mg [Prunus persica][more]
gi|225455880|ref|XP_002275327.1|6.4e-7286.90PREDICTED: protein CASP [Vitis vinifera][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0030244 cellulose biosynthetic process
biological_process GO:0006891 intra-Golgi vesicle-mediated transport
biological_process GO:0008150 biological_process
cellular_component GO:0005768 endosome
cellular_component GO:0030173 integral component of Golgi membrane
cellular_component GO:0005802 trans-Golgi network
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh11G009020.1CmoCh11G009020.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableunknownCoilCoilcoord: 179..213
score: -coord: 131..158
scor
NoneNo IPR availablePANTHERPTHR14043CCAAT DISPLACEMENT PROTEIN-RELATEDcoord: 68..220
score: 1.5

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmoCh11G009020Cucsa.355650Cucumber (Gy14) v1cgycmoB0973
CmoCh11G009020CmaCh10G008840Cucurbita maxima (Rimu)cmacmoB074
CmoCh11G009020Cla007351Watermelon (97103) v1cmowmB089
CmoCh11G009020Csa1G629150Cucumber (Chinese Long) v2cmocuB075
CmoCh11G009020MELO3C015107Melon (DHL92) v3.5.1cmomeB097
CmoCh11G009020ClCG03G012520Watermelon (Charleston Gray)cmowcgB101
CmoCh11G009020CSPI01G31120Wild cucumber (PI 183967)cmocpiB078
CmoCh11G009020Lsi06G005860Bottle gourd (USVL1VR-Ls)cmolsiB118
CmoCh11G009020Cp4.1LG18g01970Cucurbita pepo (Zucchini)cmocpeB104
CmoCh11G009020Cp4.1LG04g12370Cucurbita pepo (Zucchini)cmocpeB129
CmoCh11G009020MELO3C015107.2Melon (DHL92) v3.6.1cmomedB104
CmoCh11G009020CsaV3_1G043510Cucumber (Chinese Long) v3cmocucB0090
CmoCh11G009020Cla97C03G062820Watermelon (97103) v2cmowmbB100
CmoCh11G009020Bhi02G001236Wax gourdcmowgoB0159
CmoCh11G009020CsGy1G030340Cucumber (Gy14) v2cgybcmoB027
CmoCh11G009020Carg17853Silver-seed gourdcarcmoB1298
CmoCh11G009020Carg25983Silver-seed gourdcarcmoB1201
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CmoCh11G009020CmoCh10G009230Cucurbita moschata (Rifu)cmocmoB044
The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh11G009020Cucurbita moschata (Rifu)cmocmoB118
CmoCh11G009020Cucurbita maxima (Rimu)cmacmoB112
CmoCh11G009020Cucurbita maxima (Rimu)cmacmoB574
CmoCh11G009020Cucurbita pepo (Zucchini)cmocpeB134
CmoCh11G009020Silver-seed gourdcarcmoB1228