Carg25983 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg25983
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	protein CASP
Location	Cucurbita_argyrosperma_scaffold_311 : 97414 .. 99701 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

AGAGCCGTTGGTCTTGCTGATGCCATTCACACAGTAGAGAGCCGTTGGCCAACGAACTTGGTTGATATTCCTTGCATTGCATTGCAATGCACATTCACAGATTCACTTCTCCAAATTCACACAGAAGAAGAAGAATGAGACGTCCAATTCGCCATACCAGAAGTGTTGAAGCTCCCCGGATTTCTGCATTACTTCCTTGATCTCTAAATCTATCTCACAATTACTGTAGAAACTCTGTGATTCTAGTTTTTGAAAGTGATCGCACTCTTGAACTCGCTGAGCGGCCATATCTGAATTACGCATTCCCAAACATGGAGTCTCCGCAAGGTGGATCCGATAGGGATAAACCGCCGGACACTTCCTCGTCCTCTTCTCCCGTCTCCGTCGTTTCCAGTTTCTGGAAAGGTAATAGTCTAATTGTAAATCGGGTTCTCTCTCAATTCTTGCGCTTATTGGTGGGTTTGGACTTCATTATTAACTAGCTTAAGAAAATTACGTGTTCTATGTTATGTTCTGATTCACAGCAGGGGCATTCAATTTCTATGCGTTAGTTTGAATTTTGAGCTCAATTTTATTTAAGAAGACTAGAATTTTTATACTGAGAGGTTCTTGTCCATTGGAGAAAGGTAGTATGTTGCAATGCGAATCGTTGAGTTAAATGGTACTAACGAATATCAAAGGCATTTTGTGCCTTTGGATATGAAGTTCCAATAAGACTATCAATTGCTGTCTGTTTGATTTAAGACTGCCTTGAAAAATTTACCCTCTTCTAACACAAAATGGTCACTGGTTTCCTATTTGCAGAGTTTGATTTAGAGGAGGAGAAAAGTGCATTGGATGAACAAGGACTTAGGATAGCTGAAAACCAAGAAAATAGCCAGAAAAATCGTCGGAAGCTTGCTGAAAGTACAAGAGGTTGTTGCTCATGTCCCCTTCTGTTATTCTTACTATTTTTCCTCTGAAAATATCTTTGCTACAGTTTTAAAATGATTTTAACAGAGAACTCTGACAGATTTCAAGAAGGCTTCACCAGTGGATAAATTGAACTTGTTTAATTCTCTACTTAAAAATTACCAAGAGGAAGTTGACAATCTCACGAAGAGGGCAAAATTTGGAGAAAATTCTTTTCTTAACATCTATCAGAAACTTTATGAGGCTCCTGATCCTTATCCTGCTCTTGCTTCAATTGGTGTAAGTGCCAAATACATTCACATGGGTGTTGCATTTAAGCAGCATCAGTGATTTGAACTTGTGAACATTTTTCTTCTTCATTATACTTTAATGCTACTTAATAGTATGGAATCTCTTTGAAAATATTTTTGTTGTACAATCAGATGTGAGCCTTCAAATTTGGTAGGGTGTGAAATATATTATGACAAAAGAAAAAAAGGAAGAAATATCGAAGTACTAGGATGAACAATGTGGAATGTTTCAGAAAAGTTTCTCCATGTTCTGTATTCACTAATCCATAAATATATACTGAACTTATGAACGATCACGTGAAGTCTGAATTCACTGTCTTCTTGCGTCTCAATGGGGTAATGGAAATGAAGAACCATATTGATATGTTTTGTATTAAACCCTGTTGCTTTATGCTATTAGTCATCTTTTAAAGATTTTGCTGCACAACGTTCTCTTTGCAGGAACAAGATTTGAAATTGTCTGAATTAGAATCTAAGAACAAGAAAATGAAAGTTGAGCTTGAGGAGTTTAGAACTGAAGCAACACATTTAAAGAATCAGCAGGCCACAATTAGAAAACTTGGAAGAGCGCAATCGGCAATTGGAGCAACAGGTTACATTTTTTTTTTGTATGCTGTGATGAATGATGATAATAGTACATTGACATTTTTCCATATAACTAAATGGTACGATAACACTATGGAATGGATTGAATATTCTCTCATCAATTTCCAAACCACAACACCTTCAAATCAATTTTGACCAACCGAAGGTTTAGGTTTAGACACAATTCCATTGTTGGACACTTTGAGCTTGGTGGAGGTCCCTTGGTTCATGTCACTAATACTGCTAGTCAGTCTTGAGAGAGTAATATTCTAGTAGTAAACCTTCCACCTGGTATTCTTCATATTGAAAACGGAATTAGCAGAACAACCAAGCCGATCCATGCAGTAAAAAATATATTAAGAAATTGAATAGGACTAGCACATTCAAATTATACAAACAAATCTTGATTTTAGAGAATTAAAATTGGTCACTGGAAAAATTAGGTAGTTAATCATTACACTCTTCCTCGTTTCATCTGTTAATCTTATTTTAGTTGTCTAG

mRNA sequence

AGAGCCGTTGGTCTTGCTGATGCCATTCACACAGTAGAGAGCCGTTGGCCAACGAACTTGGTTGATATTCCTTGCATTGCATTGCAATGCACATTCACAGATTCACTTCTCCAAATTCACACAGAAGAAGAAGAATGAGACGTCCAATTCGCCATACCAGAAGTGTTGAAGCTCCCCGGATTTCTGCATTACTTCCTTGATCTCTAAATCTATCTCACAATTACTGTAGAAACTCTGTGATTCTAGTTTTTGAAAGTGATCGCACTCTTGAACTCGCTGAGCGGCCATATCTGAATTACGCATTCCCAAACATGGAGTCTCCGCAAGGTGGATCCGATAGGGATAAACCGCCGGACACTTCCTCGTCCTCTTCTCCCGTCTCCGTCGTTTCCAGTTTCTGGAAAGAGTTTGATTTAGAGGAGGAGAAAAGTGCATTGGATGAACAAGGACTTAGGATAGCTGAAAACCAAGAAAATAGCCAGAAAAATCGTCGGAAGCTTGCTGAAAGTACAAGAGATTTCAAGAAGGCTTCACCAGTGGATAAATTGAACTTGTTTAATTCTCTACTTAAAAATTACCAAGAGGAAGTTGACAATCTCACGAAGAGGGCAAAATTTGGAGAAAATTCTTTTCTTAACATCTATCAGAAACTTTATGAGGCTCCTGATCCTTATCCTGCTCTTGCTTCAATTGGTGAACAAGATTTGAAATTGTCTGAATTAGAATCTAAGAACAAGAAAATGAAAGTTGAGCTTGAGGAGTTTAGAACTGAAGCAACACATTTAAAGAATCAGCAGGCCACAATTAGAAAACTTGGAAGAGCGCAATCGGCAATTGGAGCAACAGTTGTCTAG

Coding sequence (CDS)

ATGGAGTCTCCGCAAGGTGGATCCGATAGGGATAAACCGCCGGACACTTCCTCGTCCTCTTCTCCCGTCTCCGTCGTTTCCAGTTTCTGGAAAGAGTTTGATTTAGAGGAGGAGAAAAGTGCATTGGATGAACAAGGACTTAGGATAGCTGAAAACCAAGAAAATAGCCAGAAAAATCGTCGGAAGCTTGCTGAAAGTACAAGAGATTTCAAGAAGGCTTCACCAGTGGATAAATTGAACTTGTTTAATTCTCTACTTAAAAATTACCAAGAGGAAGTTGACAATCTCACGAAGAGGGCAAAATTTGGAGAAAATTCTTTTCTTAACATCTATCAGAAACTTTATGAGGCTCCTGATCCTTATCCTGCTCTTGCTTCAATTGGTGAACAAGATTTGAAATTGTCTGAATTAGAATCTAAGAACAAGAAAATGAAAGTTGAGCTTGAGGAGTTTAGAACTGAAGCAACACATTTAAAGAATCAGCAGGCCACAATTAGAAAACTTGGAAGAGCGCAATCGGCAATTGGAGCAACAGTTGTCTAG

Protein sequence

MESPQGGSDRDKPPDTSSSSSPVSVVSSFWKEFDLEEEKSALDEQGLRIAENQENSQKNRRKLAESTRDFKKASPVDKLNLFNSLLKNYQEEVDNLTKRAKFGENSFLNIYQKLYEAPDPYPALASIGEQDLKLSELESKNKKMKVELEEFRTEATHLKNQQATIRKLGRAQSAIGATVV

Homology

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BLAST of Carg25983 vs. NCBI nr
Match: XP_022988038.1 (protein CASP [Cucurbita maxima])

HSP 1 Score: 285.4 bits (729), Expect = 1.3e-73
Identity = 148/162 (91.36%), Postives = 160/162 (98.77%), Query Frame = 0


Query: 1   MESPQGGSDRDKPPDTSSSSSPVSVVSSFWKEFDLEEEKSALDEQGLRIAENQENSQKNR 60
           MESP+GGS+RDKPP++SSS+SPVSVVSSFWKEFDLE+EKSALDEQGLRIAENQENSQKNR
Sbjct: 1   MESPKGGSERDKPPNSSSSASPVSVVSSFWKEFDLEKEKSALDEQGLRIAENQENSQKNR 60

Query: 61  RKLAESTRDFKKASPVDKLNLFNSLLKNYQEEVDNLTKRAKFGENSFLNIYQKLYEAPDP 120
           RKLAESTRDFKKA P +KLNLF+SLLK+YQEEVDNLTKRAKFGEN+FLNIYQKLYEAPDP
Sbjct: 61  RKLAESTRDFKKAQPEEKLNLFSSLLKSYQEEVDNLTKRAKFGENAFLNIYQKLYEAPDP 120

Query: 121 YPALASIGEQDLKLSELESKNKKMKVELEEFRTEATHLKNQQ 163
           YPALASIGEQDLKLSELES+N+KMKVELEEFRTEATHLKNQQ
Sbjct: 121 YPALASIGEQDLKLSELESENRKMKVELEEFRTEATHLKNQQ 162

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BLAST of Carg25983 vs. NCBI nr
Match: XP_008450331.1 (PREDICTED: LOW QUALITY PROTEIN: protein CASP [Cucumis melo])

HSP 1 Score: 283.9 bits (725), Expect = 3.9e-73
Identity = 148/162 (91.36%), Postives = 159/162 (98.15%), Query Frame = 0


Query: 1   MESPQGGSDRDKPPDTSSSSSPVSVVSSFWKEFDLEEEKSALDEQGLRIAENQENSQKNR 60
           MESPQGGS+RDKPP++SSS+S VSVVSSFWKEFDLE+EKSALDEQGLRIAENQENSQKNR
Sbjct: 1   MESPQGGSERDKPPNSSSSTSAVSVVSSFWKEFDLEKEKSALDEQGLRIAENQENSQKNR 60

Query: 61  RKLAESTRDFKKASPVDKLNLFNSLLKNYQEEVDNLTKRAKFGENSFLNIYQKLYEAPDP 120
           RKLAESTRDFKKA P +KLNLF+SLLK+YQEEVDNLTKRAKFGEN+FLNIYQKLYEAPDP
Sbjct: 61  RKLAESTRDFKKAQPEEKLNLFSSLLKSYQEEVDNLTKRAKFGENAFLNIYQKLYEAPDP 120

Query: 121 YPALASIGEQDLKLSELESKNKKMKVELEEFRTEATHLKNQQ 163
           YPALASIGEQDLKLSELES+N+KMKVELEEFRTEATHLKNQQ
Sbjct: 121 YPALASIGEQDLKLSELESENRKMKVELEEFRTEATHLKNQQ 162

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BLAST of Carg25983 vs. NCBI nr
Match: XP_011660168.1 (PREDICTED: protein CASP [Cucumis sativus] >KGN66558.1 hypothetical protein Csa_1G629150 [Cucumis sativus])

HSP 1 Score: 283.9 bits (725), Expect = 3.9e-73
Identity = 148/162 (91.36%), Postives = 159/162 (98.15%), Query Frame = 0


Query: 1   MESPQGGSDRDKPPDTSSSSSPVSVVSSFWKEFDLEEEKSALDEQGLRIAENQENSQKNR 60
           MESPQGGS+RDKPP++SSS+S VSVVSSFWKEFDLE+EKSALDEQGLRIAENQENSQKNR
Sbjct: 1   MESPQGGSERDKPPNSSSSTSAVSVVSSFWKEFDLEKEKSALDEQGLRIAENQENSQKNR 60

Query: 61  RKLAESTRDFKKASPVDKLNLFNSLLKNYQEEVDNLTKRAKFGENSFLNIYQKLYEAPDP 120
           RKLAESTRDFKKA P +KLNLF+SLLK+YQEEVDNLTKRAKFGEN+FLNIYQKLYEAPDP
Sbjct: 61  RKLAESTRDFKKAQPEEKLNLFSSLLKSYQEEVDNLTKRAKFGENAFLNIYQKLYEAPDP 120

Query: 121 YPALASIGEQDLKLSELESKNKKMKVELEEFRTEATHLKNQQ 163
           YPALASIGEQDLKLSELES+N+KMKVELEEFRTEATHLKNQQ
Sbjct: 121 YPALASIGEQDLKLSELESENRKMKVELEEFRTEATHLKNQQ 162

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BLAST of Carg25983 vs. NCBI nr
Match: XP_022961112.1 (protein CASP [Cucurbita moschata])

HSP 1 Score: 283.9 bits (725), Expect = 3.9e-73
Identity = 147/162 (90.74%), Postives = 160/162 (98.77%), Query Frame = 0


Query: 1   MESPQGGSDRDKPPDTSSSSSPVSVVSSFWKEFDLEEEKSALDEQGLRIAENQENSQKNR 60
           MESP+GGS+RDKPP++SSS+SPVSVVSSFW+EFDLE+EKSALDEQGLRIAENQENSQKNR
Sbjct: 1   MESPKGGSERDKPPNSSSSASPVSVVSSFWQEFDLEKEKSALDEQGLRIAENQENSQKNR 60

Query: 61  RKLAESTRDFKKASPVDKLNLFNSLLKNYQEEVDNLTKRAKFGENSFLNIYQKLYEAPDP 120
           RKLAESTRDFKKA P +KLNLF+SLLK+YQEEVDNLTKRAKFGEN+FLNIYQKLYEAPDP
Sbjct: 61  RKLAESTRDFKKAQPEEKLNLFSSLLKSYQEEVDNLTKRAKFGENAFLNIYQKLYEAPDP 120

Query: 121 YPALASIGEQDLKLSELESKNKKMKVELEEFRTEATHLKNQQ 163
           YPALASIGEQDLKLSELES+N+KMKVELEEFRTEATHLKNQQ
Sbjct: 121 YPALASIGEQDLKLSELESENRKMKVELEEFRTEATHLKNQQ 162

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BLAST of Carg25983 vs. NCBI nr
Match: XP_023516315.1 (protein CASP [Cucurbita pepo subsp. pepo])

HSP 1 Score: 283.9 bits (725), Expect = 3.9e-73
Identity = 147/162 (90.74%), Postives = 160/162 (98.77%), Query Frame = 0


Query: 1   MESPQGGSDRDKPPDTSSSSSPVSVVSSFWKEFDLEEEKSALDEQGLRIAENQENSQKNR 60
           MESP+GGS+RDKPP++SSS+SPVSVVSSFW+EFDLE+EKSALDEQGLRIAENQENSQKNR
Sbjct: 1   MESPKGGSERDKPPNSSSSASPVSVVSSFWQEFDLEKEKSALDEQGLRIAENQENSQKNR 60

Query: 61  RKLAESTRDFKKASPVDKLNLFNSLLKNYQEEVDNLTKRAKFGENSFLNIYQKLYEAPDP 120
           RKLAESTRDFKKA P +KLNLF+SLLK+YQEEVDNLTKRAKFGEN+FLNIYQKLYEAPDP
Sbjct: 61  RKLAESTRDFKKAQPEEKLNLFSSLLKSYQEEVDNLTKRAKFGENAFLNIYQKLYEAPDP 120

Query: 121 YPALASIGEQDLKLSELESKNKKMKVELEEFRTEATHLKNQQ 163
           YPALASIGEQDLKLSELES+N+KMKVELEEFRTEATHLKNQQ
Sbjct: 121 YPALASIGEQDLKLSELESENRKMKVELEEFRTEATHLKNQQ 162

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BLAST of Carg25983 vs. TAIR10
Match: AT3G18480.1 (CCAAT-displacement protein alternatively spliced product)

HSP 1 Score: 243.0 bits (619), Expect = 1.4e-64
Identity = 131/167 (78.44%), Postives = 145/167 (86.83%), Query Frame = 0


Query: 1   MESPQGGSDRDK---PPDTSSSSSPVSVVSSFWKEFDLEEEKSALDEQGLRIAENQENSQ 60
           ME  Q GS+RDK             + VV++FWKEFDLE+EKS LDEQGLRIAENQENSQ
Sbjct: 1   MEVSQDGSERDKXXXXXXXXXXXXXIPVVTNFWKEFDLEKEKSLLDEQGLRIAENQENSQ 60

Query: 61  KNRRKLAESTRDFKKASPVDKLNLFNSLLKNYQEEVDNLTKRAKFGENSFLNIYQKLYEA 120
           KNRRKLAESTRDFKKASP +KL++FNSLLK YQEEVDN+TKRAKFGEN+FLNIYQKLYEA
Sbjct: 61  KNRRKLAESTRDFKKASPENKLSMFNSLLKGYQEEVDNITKRAKFGENAFLNIYQKLYEA 120

Query: 121 PDPYPALASIGEQDLKLSELESKNKKMKVELEEFRTEATHLKNQQAT 165
           PDP+PALASI EQD KLSE+ES+N+KMKVELEEFRTEATHLKNQQAT
Sbjct: 121 PDPFPALASIAEQDRKLSEVESENRKMKVELEEFRTEATHLKNQQAT 167

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BLAST of Carg25983 vs. Swiss-Prot
Match: sp|Q9LS42|CASP_ARATH (Protein CASP OS=Arabidopsis thaliana OX=3702 GN=CASP PE=1 SV=2)

HSP 1 Score: 243.0 bits (619), Expect = 2.5e-63
Identity = 131/167 (78.44%), Postives = 145/167 (86.83%), Query Frame = 0


Query: 1   MESPQGGSDRDK---PPDTSSSSSPVSVVSSFWKEFDLEEEKSALDEQGLRIAENQENSQ 60
           ME  Q GS+RDK             + VV++FWKEFDLE+EKS LDEQGLRIAENQENSQ
Sbjct: 1   MEVSQDGSERDKXXXXXXXXXXXXXIPVVTNFWKEFDLEKEKSLLDEQGLRIAENQENSQ 60

Query: 61  KNRRKLAESTRDFKKASPVDKLNLFNSLLKNYQEEVDNLTKRAKFGENSFLNIYQKLYEA 120
           KNRRKLAESTRDFKKASP +KL++FNSLLK YQEEVDN+TKRAKFGEN+FLNIYQKLYEA
Sbjct: 61  KNRRKLAESTRDFKKASPENKLSMFNSLLKGYQEEVDNITKRAKFGENAFLNIYQKLYEA 120

Query: 121 PDPYPALASIGEQDLKLSELESKNKKMKVELEEFRTEATHLKNQQAT 165
           PDP+PALASI EQD KLSE+ES+N+KMKVELEEFRTEATHLKNQQAT
Sbjct: 121 PDPFPALASIAEQDRKLSEVESENRKMKVELEEFRTEATHLKNQQAT 167

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BLAST of Carg25983 vs. Swiss-Prot
Match: sp|P70403|CASP_MOUSE (Protein CASP OS=Mus musculus OX=10090 GN=Cux1 PE=1 SV=2)

HSP 1 Score: 107.1 bits (266), Expect = 2.1e-22
Identity = 59/150 (39.33%), Postives = 99/150 (66.00%), Query Frame = 0


Query: 23  VSVVSSFWKEFDLEEEKSALDEQGLRIAENQENSQKNRRKLAESTRDFKKASPVDKLNLF 82
           V  +S +WK FDL++ +  LD     +A  Q+ S+++R++L E +R+FKK +P D     
Sbjct: 5   VGSMSQYWKRFDLQQLQRELDAAATVLANRQDESEQSRKRLIEQSREFKKNTPEDLRKQV 64

Query: 83  NSLLKNYQEEVDNLTKRAKFGENSFLNIYQKLYEAPDPYPALASIGEQ-DLK---LSELE 142
             LLK++Q E+D L+KR+K  E +FL +Y++L + PDP PAL  +G+Q ++K   L ++E
Sbjct: 65  APLLKSFQGEIDALSKRSKEAEAAFLTVYKRLIDVPDPVPAL-DVGQQLEIKVQRLHDIE 124

Query: 143 SKNKKMKVELEEFRTEATHLKNQQATIRKL 169
           ++N+K++  LEE+  E   +KNQ+ TI+ L
Sbjct: 125 TENQKLRETLEEYNKEFAEVKNQEVTIKAL 153

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BLAST of Carg25983 vs. Swiss-Prot
Match: sp|Q13948|CASP_HUMAN (Protein CASP OS=Homo sapiens OX=9606 GN=CUX1 PE=1 SV=2)

HSP 1 Score: 106.7 bits (265), Expect = 2.8e-22
Identity = 60/150 (40.00%), Postives = 98/150 (65.33%), Query Frame = 0


Query: 23  VSVVSSFWKEFDLEEEKSALDEQGLRIAENQENSQKNRRKLAESTRDFKKASPVDKLNLF 82
           V  +  +WK FDL++ +  LD     +A  Q+ S+++R++L E +R+FKK +P D     
Sbjct: 5   VGSMFQYWKRFDLQQLQRELDATATVLANRQDESEQSRKRLIEQSREFKKNTPEDLRKQV 64

Query: 83  NSLLKNYQEEVDNLTKRAKFGENSFLNIYQKLYEAPDPYPALASIGEQ-DLK---LSELE 142
             LLK++Q E+D L+KR+K  E +FLN+Y++L + PDP PAL  +G+Q  LK   L ++E
Sbjct: 65  APLLKSFQGEIDALSKRSKEAEAAFLNVYKRLIDVPDPVPAL-DLGQQLQLKVQRLHDIE 124

Query: 143 SKNKKMKVELEEFRTEATHLKNQQATIRKL 169
           ++N+K++  LEE+  E   +KNQ+ TI+ L
Sbjct: 125 TENQKLRETLEEYNKEFAEVKNQEVTIKAL 153

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BLAST of Carg25983 vs. Swiss-Prot
Match: sp|Q5R8V1|CASP_PONAB (Protein CASP OS=Pongo abelii OX=9601 GN=CUTL1 PE=2 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 2.8e-22
Identity = 60/150 (40.00%), Postives = 98/150 (65.33%), Query Frame = 0


Query: 23  VSVVSSFWKEFDLEEEKSALDEQGLRIAENQENSQKNRRKLAESTRDFKKASPVDKLNLF 82
           V  +  +WK FDL++ +  LD     +A  Q+ S+++R++L E +R+FKK +P D     
Sbjct: 5   VGSMFQYWKRFDLQQLQRELDATATVLANRQDESEQSRKRLIEQSREFKKNTPEDLRKQV 64

Query: 83  NSLLKNYQEEVDNLTKRAKFGENSFLNIYQKLYEAPDPYPALASIGEQ-DLK---LSELE 142
             LLK++Q E+D L+KR+K  E +FLN+Y++L + PDP PAL  +G+Q  LK   L ++E
Sbjct: 65  APLLKSFQGEIDALSKRSKEAEAAFLNVYKRLIDVPDPVPAL-DLGQQLQLKVQRLHDIE 124

Query: 143 SKNKKMKVELEEFRTEATHLKNQQATIRKL 169
           ++N+K++  LEE+  E   +KNQ+ TI+ L
Sbjct: 125 TENQKLRETLEEYNKEFAEVKNQEVTIKAL 153

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BLAST of Carg25983 vs. Swiss-Prot
Match: sp|P53565|CUX1_RAT (Homeobox protein cut-like 1 OS=Rattus norvegicus OX=10116 GN=Cux1 PE=1 SV=2)

HSP 1 Score: 104.4 bits (259), Expect = 1.4e-21
Identity = 58/150 (38.67%), Postives = 98/150 (65.33%), Query Frame = 0


Query: 23  VSVVSSFWKEFDLEEEKSALDEQGLRIAENQENSQKNRRKLAESTRDFKKASPVDKLNLF 82
           V  +  +WK FDL++ +  LD     +A  Q+ S+++R++L E +R+FKK +P D     
Sbjct: 5   VGSMFQYWKRFDLQQLQRELDATATVLANRQDESEQSRKRLIEQSREFKKNTPEDLRKQV 64

Query: 83  NSLLKNYQEEVDNLTKRAKFGENSFLNIYQKLYEAPDPYPALASIGEQ-DLK---LSELE 142
             LLK++Q E+D L+KR+K  E +FL +Y++L + PDP PAL  +G+Q ++K   L ++E
Sbjct: 65  APLLKSFQGEIDALSKRSKEAEAAFLTVYKRLIDVPDPVPAL-DLGQQLEIKVQRLHDIE 124

Query: 143 SKNKKMKVELEEFRTEATHLKNQQATIRKL 169
           ++N+K++  LEE+  E   +KNQ+ TI+ L
Sbjct: 125 TENQKLRETLEEYNKEFAEVKNQEVTIKAL 153

[Close]

BLAST of Carg25983 vs. TrEMBL
Match: tr|A0A1S3BQ05|A0A1S3BQ05_CUCME (LOW QUALITY PROTEIN: protein CASP OS=Cucumis melo OX=3656 GN=LOC103491970 PE=4 SV=1)

HSP 1 Score: 283.9 bits (725), Expect = 2.6e-73
Identity = 148/162 (91.36%), Postives = 159/162 (98.15%), Query Frame = 0


Query: 1   MESPQGGSDRDKPPDTSSSSSPVSVVSSFWKEFDLEEEKSALDEQGLRIAENQENSQKNR 60
           MESPQGGS+RDKPP++SSS+S VSVVSSFWKEFDLE+EKSALDEQGLRIAENQENSQKNR
Sbjct: 1   MESPQGGSERDKPPNSSSSTSAVSVVSSFWKEFDLEKEKSALDEQGLRIAENQENSQKNR 60

Query: 61  RKLAESTRDFKKASPVDKLNLFNSLLKNYQEEVDNLTKRAKFGENSFLNIYQKLYEAPDP 120
           RKLAESTRDFKKA P +KLNLF+SLLK+YQEEVDNLTKRAKFGEN+FLNIYQKLYEAPDP
Sbjct: 61  RKLAESTRDFKKAQPEEKLNLFSSLLKSYQEEVDNLTKRAKFGENAFLNIYQKLYEAPDP 120

Query: 121 YPALASIGEQDLKLSELESKNKKMKVELEEFRTEATHLKNQQ 163
           YPALASIGEQDLKLSELES+N+KMKVELEEFRTEATHLKNQQ
Sbjct: 121 YPALASIGEQDLKLSELESENRKMKVELEEFRTEATHLKNQQ 162

[Close]

BLAST of Carg25983 vs. TrEMBL
Match: tr|A0A0A0LXT3|A0A0A0LXT3_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G629150 PE=4 SV=1)

HSP 1 Score: 283.9 bits (725), Expect = 2.6e-73
Identity = 148/162 (91.36%), Postives = 159/162 (98.15%), Query Frame = 0


Query: 1   MESPQGGSDRDKPPDTSSSSSPVSVVSSFWKEFDLEEEKSALDEQGLRIAENQENSQKNR 60
           MESPQGGS+RDKPP++SSS+S VSVVSSFWKEFDLE+EKSALDEQGLRIAENQENSQKNR
Sbjct: 1   MESPQGGSERDKPPNSSSSTSAVSVVSSFWKEFDLEKEKSALDEQGLRIAENQENSQKNR 60

Query: 61  RKLAESTRDFKKASPVDKLNLFNSLLKNYQEEVDNLTKRAKFGENSFLNIYQKLYEAPDP 120
           RKLAESTRDFKKA P +KLNLF+SLLK+YQEEVDNLTKRAKFGEN+FLNIYQKLYEAPDP
Sbjct: 61  RKLAESTRDFKKAQPEEKLNLFSSLLKSYQEEVDNLTKRAKFGENAFLNIYQKLYEAPDP 120

Query: 121 YPALASIGEQDLKLSELESKNKKMKVELEEFRTEATHLKNQQ 163
           YPALASIGEQDLKLSELES+N+KMKVELEEFRTEATHLKNQQ
Sbjct: 121 YPALASIGEQDLKLSELESENRKMKVELEEFRTEATHLKNQQ 162

[Close]

BLAST of Carg25983 vs. TrEMBL
Match: tr|M5VPY4|M5VPY4_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_ppa002344mg PE=4 SV=1)

HSP 1 Score: 276.2 bits (705), Expect = 5.3e-71
Identity = 147/167 (88.02%), Postives = 158/167 (94.61%), Query Frame = 0


Query: 1   MESPQGGSDRDKPPDTSSSSSPVSVVSSFWKEFDLEEEKSALDEQGLRIAENQENSQKNR 60
           ME+PQGGSDRDK   +SSSSSP+SVVS+FWKEFDLE+EKS LDEQGLRIAENQENSQKNR
Sbjct: 1   MEAPQGGSDRDK---SSSSSSPISVVSNFWKEFDLEKEKSVLDEQGLRIAENQENSQKNR 60

Query: 61  RKLAESTRDFKKASPVDKLNLFNSLLKNYQEEVDNLTKRAKFGENSFLNIYQKLYEAPDP 120
           RKLAESTRDFKKASP +KLNLFNSLL+ YQEEVDNLTKRAKFGEN+FLNIYQKLYEAPDP
Sbjct: 61  RKLAESTRDFKKASPEEKLNLFNSLLRGYQEEVDNLTKRAKFGENAFLNIYQKLYEAPDP 120

Query: 121 YPALASIGEQDLKLSELESKNKKMKVELEEFRTEATHLKNQQATIRK 168
           Y ALAS  EQDLKLSELES+N+KMKVELEEFRTEATHLKNQQATIR+
Sbjct: 121 YLALASSAEQDLKLSELESENRKMKVELEEFRTEATHLKNQQATIRR 164

[Close]

BLAST of Carg25983 vs. TrEMBL
Match: tr|A0A251MW18|A0A251MW18_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_8G104400 PE=4 SV=1)

HSP 1 Score: 276.2 bits (705), Expect = 5.3e-71
Identity = 147/167 (88.02%), Postives = 158/167 (94.61%), Query Frame = 0


Query: 1   MESPQGGSDRDKPPDTSSSSSPVSVVSSFWKEFDLEEEKSALDEQGLRIAENQENSQKNR 60
           ME+PQGGSDRDK   +SSSSSP+SVVS+FWKEFDLE+EKS LDEQGLRIAENQENSQKNR
Sbjct: 1   MEAPQGGSDRDK---SSSSSSPISVVSNFWKEFDLEKEKSVLDEQGLRIAENQENSQKNR 60

Query: 61  RKLAESTRDFKKASPVDKLNLFNSLLKNYQEEVDNLTKRAKFGENSFLNIYQKLYEAPDP 120
           RKLAESTRDFKKASP +KLNLFNSLL+ YQEEVDNLTKRAKFGEN+FLNIYQKLYEAPDP
Sbjct: 61  RKLAESTRDFKKASPEEKLNLFNSLLRGYQEEVDNLTKRAKFGENAFLNIYQKLYEAPDP 120

Query: 121 YPALASIGEQDLKLSELESKNKKMKVELEEFRTEATHLKNQQATIRK 168
           Y ALAS  EQDLKLSELES+N+KMKVELEEFRTEATHLKNQQATIR+
Sbjct: 121 YLALASSAEQDLKLSELESENRKMKVELEEFRTEATHLKNQQATIRR 164

[Close]

BLAST of Carg25983 vs. TrEMBL
Match: tr|A0A1S2Z0J1|A0A1S2Z0J1_CICAR (protein CASP OS=Cicer arietinum OX=3827 GN=LOC101507997 PE=4 SV=1)

HSP 1 Score: 271.2 bits (692), Expect = 1.7e-69
Identity = 141/168 (83.93%), Postives = 158/168 (94.05%), Query Frame = 0


Query: 1   MESPQGGSDRDKPPDTSSSSSPVSVVSSFWKEFDLEEEKSALDEQGLRIAENQENSQKNR 60
           MESPQGGS+RDK      ++SP+SVVS+FWK+FDLE+EKS LDEQGLRIAENQENSQKNR
Sbjct: 1   MESPQGGSERDK------TNSPISVVSAFWKDFDLEKEKSVLDEQGLRIAENQENSQKNR 60

Query: 61  RKLAESTRDFKKASPVDKLNLFNSLLKNYQEEVDNLTKRAKFGENSFLNIYQKLYEAPDP 120
           RKLAESTR+FKKASP DKL+LFN+LLK YQEEVDNLTKRAKFGEN+FLNIYQKLYEAPDP
Sbjct: 61  RKLAESTRNFKKASPEDKLSLFNTLLKGYQEEVDNLTKRAKFGENAFLNIYQKLYEAPDP 120

Query: 121 YPALASIGEQDLKLSELESKNKKMKVELEEFRTEATHLKNQQATIRKL 169
           YPALAS+ EQD+KLSE+ES+N+KMKVELEEFRTEATHLKNQQATIR+L
Sbjct: 121 YPALASVAEQDIKLSEVESENRKMKVELEEFRTEATHLKNQQATIRRL 162

The following BLAST results are available for this feature:

BLAST of Carg25983 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022988038.1	1.3e-73	91.36	protein CASP [Cucurbita maxima]	[more]
XP_008450331.1	3.9e-73	91.36	PREDICTED: LOW QUALITY PROTEIN: protein CASP [Cucumis melo]	[more]
XP_011660168.1	3.9e-73	91.36	PREDICTED: protein CASP [Cucumis sativus] >KGN66558.1 hypothetical protein Csa_1...	[more]
XP_022961112.1	3.9e-73	90.74	protein CASP [Cucurbita moschata]	[more]
XP_023516315.1	3.9e-73	90.74	protein CASP [Cucurbita pepo subsp. pepo]	[more]

BLAST of Carg25983 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G18480.1	1.4e-64	78.44	CCAAT-displacement protein alternatively spliced product	[more]

BLAST of Carg25983 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9LS42\|CASP_ARATH	2.5e-63	78.44	Protein CASP OS=Arabidopsis thaliana OX=3702 GN=CASP PE=1 SV=2	[more]
sp\|P70403\|CASP_MOUSE	2.1e-22	39.33	Protein CASP OS=Mus musculus OX=10090 GN=Cux1 PE=1 SV=2	[more]
sp\|Q13948\|CASP_HUMAN	2.8e-22	40.00	Protein CASP OS=Homo sapiens OX=9606 GN=CUX1 PE=1 SV=2	[more]
sp\|Q5R8V1\|CASP_PONAB	2.8e-22	40.00	Protein CASP OS=Pongo abelii OX=9601 GN=CUTL1 PE=2 SV=1	[more]
sp\|P53565\|CUX1_RAT	1.4e-21	38.67	Homeobox protein cut-like 1 OS=Rattus norvegicus OX=10116 GN=Cux1 PE=1 SV=2	[more]

BLAST of Carg25983 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3BQ05\|A0A1S3BQ05_CUCME	2.6e-73	91.36	LOW QUALITY PROTEIN: protein CASP OS=Cucumis melo OX=3656 GN=LOC103491970 PE=4 S...	[more]
tr\|A0A0A0LXT3\|A0A0A0LXT3_CUCSA	2.6e-73	91.36	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G629150 PE=4 SV=1	[more]
tr\|M5VPY4\|M5VPY4_PRUPE	5.3e-71	88.02	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_ppa002344mg PE=4 SV=1	[more]
tr\|A0A251MW18\|A0A251MW18_PRUPE	5.3e-71	88.02	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_8G104400 PE=4 SV=1	[more]
tr\|A0A1S2Z0J1\|A0A1S2Z0J1_CICAR	1.7e-69	83.93	protein CASP OS=Cicer arietinum OX=3827 GN=LOC101507997 PE=4 SV=1	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg25983-RA	Carg25983-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 79..106
None	No IPR available	COILS	Coil	Coil	coord: 127..161
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 44..69
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 54..69
None	No IPR available	PANTHER	PTHR14043	CCAAT DISPLACEMENT PROTEIN-RELATED	coord: 21..168
None	No IPR available	PANTHER	PTHR14043:SF2	HOMEOBOX PROTEIN CUT	coord: 21..168

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg25983	Cla007351	Watermelon (97103) v1	carwmB0892
Carg25983	MELO3C015107	Melon (DHL92) v3.5.1	carmeB0876
Carg25983	CmoCh11G009020	Cucurbita moschata (Rifu)	carcmoB1201
Carg25983	Cp4.1LG04g12370	Cucurbita pepo (Zucchini)	carcpeB1240

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg25983	Silver-seed gourd	carcarB640
Carg25983	Cucumber (Gy14) v2	carcgybB0878
Carg25983	Cucumber (Gy14) v1	carcgyB1010
Carg25983	Cucurbita maxima (Rimu)	carcmaB1230
Carg25983	Cucurbita maxima (Rimu)	carcmaB1231
Carg25983	Cucurbita moschata (Rifu)	carcmoB1200
Carg25983	Cucurbita pepo (Zucchini)	carcpeB1239
Carg25983	Wild cucumber (PI 183967)	carcpiB0925
Carg25983	Cucumber (Chinese Long) v2	carcuB0905
Carg25983	Cucumber (Chinese Long) v3	carcucB0928
Carg25983	Bottle gourd (USVL1VR-Ls)	carlsiB807
Carg25983	Melon (DHL92) v3.6.1	carmedB0884
Carg25983	Watermelon (Charleston Gray)	carwcgB0864
Carg25983	Watermelon (97103) v2	carwmbB0928
Carg25983	Wax gourd	carwgoB1035