CmoCh11G007500 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: exonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTTCCATTGGTTAGCAAACTATATTGTTCATCTACTGAGGTTGTGTACGTCATTAGGAAGAGACCACATGTCATTAACGGAGGAGGTTTCGTGGTGACAAATTGTGACCAGAAAGTTGTTTTCAGTGTTGATGGGTGTGGGATTCTGGGAAAAGCAGAGGAGCTGATTCTAAGAGATGAGAGGAGGGATGCTTTGCTTTTGATCCGTGGGAAGGTAATATCTAAGTGTTCTACATGTTTCCTAAACAAGTCTTTTCCACTTTTCCAGCATAAAAATGGTCGATTTGGGATTATTCAGCACAGTTTTATGTTTCAGGGAGGGATTTTTGAGGCTCTAAGCTTTAATAAGATATGGAATGCTTACCGATACGACTTTCAAGGATCCAAAAAGCTGGTTTTCAGCTTGAGAAAGCCCAAGTCATGTCTTCCTGTGGACAAAGATACTGGAATTAGAATCACAACAAAACCAAACCTCGGCAAGAAAGATTGGGACTTTGAGATCAGTGGATACTTCCCTGGTAAAGAATGCAGCATCATTGATTCTCAAGGCAATTTAGTAGCTCAGGTGCGATTGAATCTCTCTTAGGATTACCTACTTGCTATATCTACCAAACGAGCCTTCCCTGCCCGCACATCACCTGGCTTGATACTGTCTAATACCAACTATATATAGATATAGATATAGATTTCGAAAGAAACCGAGCTTTTATTGTGGAAAACGAAAAAACAAAGGCAAACAAATAACAAGCCCAACAGCAGAAAGGAATCTAATAACTAACTACAGAAATAGGCTCTAATCCAGCAAAATCAAACCAAGATCATAATTACAAAACGAGCTAGCAACACCATCTAGATATAATCGAAGAGAGGAGGATGGTTGATTCGCCCTAGTATATTCTTACTTGTTTTAAATGACTGCAGATTGGAAAGAATAAAAAGGCTGGAGTCCTGTTGAGCAAGGATCTCTACTATGTGTCAATAAAACCTGGAATTGATCAGGCTTTTGTTGTTGGAGTCATTGCCATTCTCGACAACATCTATGGCGAATCAACCAGCTGCTGAATTCATAAAAGGGACGACAATCAAGTGGGGAGGATGGTAATTGCTTGTCCTCTTCCCTTTAAGGAATGCAGCTCAAAGTTTCAGTTGTGATTAAATTGGAGATTTGTGGCAGCACTCCATTTCACGCTAGTCTCCATGAACTGGGTCTGCATTTTTTGTTAACTGCAATGTATTCTTCTAACTTTTGTAGTTGTCCGTGTAAATGTAATTAAACTTTTAGCTTCTCTAGTGCCTTTAATCTTCCATATGCCTTGCATTAGGATGCTTGCTACCATATAAGAGTAGATCAAGCAGGCCCTTCTCCTGGAAGTCATTATAACTGTGGGAAAAGATGAAGGCAACTGTAG ATGGTTCCATTGGTTAGCAAACTATATTGTTCATCTACTGAGGTTGTGTACGTCATTAGGAAGAGACCACATGTCATTAACGGAGGAGGTTTCGTGGTGACAAATTGTGACCAGAAAGTTGTTTTCAGTGTTGATGGGTGTGGGATTCTGGGAAAAGCAGAGGAGCTGATTCTAAGAGATGAGAGGAGGGATGCTTTGCTTTTGATCCGTGGGAAGGTAATATCTAAGTGTTCTACATGTTTCCTAAACAAGTCTTTTCCACTTTTCCAGCATAAAAATGGTCGATTTGGGATTATTCAGCACAGTTTTATGTTTCAGGGAGGGATTTTTGAGGCTCTAAGCTTTAATAAGATATGGAATGCTTACCGATACGACTTTCAAGGATCCAAAAAGCTGGTTTTCAGCTTGAGAAAGCCCAAGTCATGTCTTCCTGTGGACAAAGATACTGGAATTAGAATCACAACAAAACCAAACCTCGGCAAGAAAGATTGGGACTTTGAGATCAGTGGATACTTCCCTGGTAAAGAATGCAGCATCATTGATTCTCAAGGCAATTTAGTAGCTCAGATTGGAAAGAATAAAAAGGCTGGAGTCCTGTTGAGCAAGGATCTCTACTATGTGTCAATAAAACCTGGAATTGATCAGGCTTTTGTTGTTGGAGTCATTGCCATTCTCGACAACATCTATGGCGAATCAACCAGCTGCTGAATTCATAAAAGGGACGACAATCAAGTGGGGAGGATGGTAATTGCTTGTCCTCTTCCCTTTAAGGAATGCAGCTCAAAGTTTCAGTTGTGATTAAATTGGAGATTTGTGGCAGCACTCCATTTCACGCTAGTCTCCATGAACTGGGTCTGCATTTTTTGTTAACTGCAATGTATTCTTCTAACTTTTGTAGTTGTCCGTGTAAATGTAATTAAACTTTTAGCTTCTCTAGTGCCTTTAATCTTCCATATGCCTTGCATTAGGATGCTTGCTACCATATAAGAGTAGATCAAGCAGGCCCTTCTCCTGGAAGTCATTATAACTGTGGGAAAAGATGAAGGCAACTGTAG ATGGTTCCATTGGTTAGCAAACTATATTGTTCATCTACTGAGGTTGTGTACGTCATTAGGAAGAGACCACATGTCATTAACGGAGGAGGTTTCGTGGTGACAAATTGTGACCAGAAAGTTGTTTTCAGTGTTGATGGGTGTGGGATTCTGGGAAAAGCAGAGGAGCTGATTCTAAGAGATGAGAGGAGGGATGCTTTGCTTTTGATCCGTGGGAAGGTAATATCTAAGTGTTCTACATGTTTCCTAAACAAGTCTTTTCCACTTTTCCAGCATAAAAATGGTCGATTTGGGATTATTCAGCACAGTTTTATGTTTCAGGGAGGGATTTTTGAGGCTCTAAGCTTTAATAAGATATGGAATGCTTACCGATACGACTTTCAAGGATCCAAAAAGCTGGTTTTCAGCTTGAGAAAGCCCAAGTCATGTCTTCCTGTGGACAAAGATACTGGAATTAGAATCACAACAAAACCAAACCTCGGCAAGAAAGATTGGGACTTTGAGATCAGTGGATACTTCCCTGGTAAAGAATGCAGCATCATTGATTCTCAAGGCAATTTAGTAGCTCAGATTGGAAAGAATAAAAAGGCTGGAGTCCTGTTGAGCAAGGATCTCTACTATGTGTCAATAAAACCTGGAATTGATCAGGCTTTTGTTGTTGGAGTCATTGCCATTCTCGACAACATCTATGGCGAATCAACCAGCTGCTGA
BLAST of CmoCh11G007500 vs. Swiss-Prot
Match: LOR6_ARATH (Protein LURP-one-related 6 OS=Arabidopsis thaliana GN=At2g05910 PE=2 SV=1) HSP 1 Score: 190.3 bits (482), Expect = 2.4e-47 Identity = 104/236 (44.07%), Postives = 143/236 (60.59%), Query Frame = 1
BLAST of CmoCh11G007500 vs. Swiss-Prot
Match: LOR16_ARATH (Protein LURP-one-related 16 OS=Arabidopsis thaliana GN=At5g20640 PE=2 SV=2) HSP 1 Score: 144.8 bits (364), Expect = 1.2e-33 Identity = 88/239 (36.82%), Postives = 135/239 (56.49%), Query Frame = 1
BLAST of CmoCh11G007500 vs. Swiss-Prot
Match: LOR5_ARATH (Protein LURP-one-related 5 OS=Arabidopsis thaliana GN=At1g80120 PE=2 SV=1) HSP 1 Score: 55.1 bits (131), Expect = 1.2e-06 Identity = 31/121 (25.62%), Postives = 66/121 (54.55%), Query Frame = 1
BLAST of CmoCh11G007500 vs. TrEMBL
Match: A0A0A0LWZ5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G597060 PE=4 SV=1) HSP 1 Score: 303.1 bits (775), Expect = 2.9e-79 Identity = 155/235 (65.96%), Postives = 178/235 (75.74%), Query Frame = 1
BLAST of CmoCh11G007500 vs. TrEMBL
Match: W9QK23_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_027406 PE=4 SV=1) HSP 1 Score: 224.6 bits (571), Expect = 1.3e-55 Identity = 116/233 (49.79%), Postives = 154/233 (66.09%), Query Frame = 1
BLAST of CmoCh11G007500 vs. TrEMBL
Match: A0A0D2R4J3_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_010G089100 PE=4 SV=1) HSP 1 Score: 222.6 bits (566), Expect = 4.9e-55 Identity = 116/236 (49.15%), Postives = 155/236 (65.68%), Query Frame = 1
BLAST of CmoCh11G007500 vs. TrEMBL
Match: G7IGE6_MEDTR (LURP-one-like protein OS=Medicago truncatula GN=MTR_0650s0010 PE=2 SV=1) HSP 1 Score: 221.1 bits (562), Expect = 1.4e-54 Identity = 123/239 (51.46%), Postives = 154/239 (64.44%), Query Frame = 1
BLAST of CmoCh11G007500 vs. TrEMBL
Match: A0A061GL50_THECC (LURP-one-related 6 OS=Theobroma cacao GN=TCM_037515 PE=4 SV=1) HSP 1 Score: 220.7 bits (561), Expect = 1.9e-54 Identity = 120/236 (50.85%), Postives = 154/236 (65.25%), Query Frame = 1
BLAST of CmoCh11G007500 vs. TAIR10
Match: AT2G05910.1 (AT2G05910.1 Protein of unknown function (DUF567)) HSP 1 Score: 190.3 bits (482), Expect = 1.4e-48 Identity = 104/236 (44.07%), Postives = 143/236 (60.59%), Query Frame = 1
BLAST of CmoCh11G007500 vs. TAIR10
Match: AT5G20640.1 (AT5G20640.1 Protein of unknown function (DUF567)) HSP 1 Score: 144.8 bits (364), Expect = 6.6e-35 Identity = 88/239 (36.82%), Postives = 135/239 (56.49%), Query Frame = 1
BLAST of CmoCh11G007500 vs. TAIR10
Match: AT1G80120.1 (AT1G80120.1 Protein of unknown function (DUF567)) HSP 1 Score: 55.1 bits (131), Expect = 6.9e-08 Identity = 31/121 (25.62%), Postives = 66/121 (54.55%), Query Frame = 1
BLAST of CmoCh11G007500 vs. TAIR10
Match: AT3G15810.1 (AT3G15810.1 Protein of unknown function (DUF567)) HSP 1 Score: 51.2 bits (121), Expect = 1.0e-06 Identity = 25/69 (36.23%), Postives = 42/69 (60.87%), Query Frame = 1
BLAST of CmoCh11G007500 vs. TAIR10
Match: AT3G11740.1 (AT3G11740.1 Protein of unknown function (DUF567)) HSP 1 Score: 49.3 bits (116), Expect = 3.8e-06 Identity = 34/123 (27.64%), Postives = 62/123 (50.41%), Query Frame = 1
BLAST of CmoCh11G007500 vs. NCBI nr
Match: gi|659100120|ref|XP_008450937.1| (PREDICTED: protein LURP-one-related 6-like [Cucumis melo]) HSP 1 Score: 320.5 bits (820), Expect = 2.5e-84 Identity = 161/235 (68.51%), Postives = 183/235 (77.87%), Query Frame = 1
BLAST of CmoCh11G007500 vs. NCBI nr
Match: gi|778663155|ref|XP_011660026.1| (PREDICTED: protein LURP-one-related 6-like [Cucumis sativus]) HSP 1 Score: 303.1 bits (775), Expect = 4.1e-79 Identity = 155/235 (65.96%), Postives = 178/235 (75.74%), Query Frame = 1
BLAST of CmoCh11G007500 vs. NCBI nr
Match: gi|743893482|ref|XP_011039975.1| (PREDICTED: protein LURP-one-related 6 [Populus euphratica]) HSP 1 Score: 226.5 bits (576), Expect = 4.9e-56 Identity = 115/236 (48.73%), Postives = 158/236 (66.95%), Query Frame = 1
BLAST of CmoCh11G007500 vs. NCBI nr
Match: gi|703075814|ref|XP_010090173.1| (hypothetical protein L484_027406 [Morus notabilis]) HSP 1 Score: 224.6 bits (571), Expect = 1.9e-55 Identity = 116/233 (49.79%), Postives = 154/233 (66.09%), Query Frame = 1
BLAST of CmoCh11G007500 vs. NCBI nr
Match: gi|823237860|ref|XP_012451577.1| (PREDICTED: protein LURP-one-related 6 [Gossypium raimondii]) HSP 1 Score: 222.6 bits (566), Expect = 7.1e-55 Identity = 116/236 (49.15%), Postives = 155/236 (65.68%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene: |