Carg12951 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGATTCCCCTAGTTAGCAAATTCTACTGTTCGTCTTCCGAGGTTGTGTTTATCGTTAGGACGAGACCACACGTCATTAATGGAGGAGGTTTTGTTGTGACAGATTGTAATCAGAAAGTTGTTTTCAGTGTTGATGGGTGTGGGATTCTGGGAAAAGAAGAGGAGCTGGTTGTGAGGGATGAGAAGAGGGATGCTTTGCTTTTACTCCGTGGGAAGGTAATATCCAATTACTCTACTCATTCCCTAAACAAGTCTTTTTGGACGATTCAGAACAGTGTTCTAAGTGGAATGTGGATGTTATACTGTGAGTATGTGTTGAAAATCTTCATCTTATTGTGTTTCAGGGAGGGATTTTCGAGGCTCTAAGCTTTCATAAGATATGGAAGGCTTACAAATATGACTTCCAAGGATCTAAAAAGCTGGTTTTCAGCTTGAGAAGACCCAAGTCATGTCTTCCTGTGAAAAACGATGTTGGAATCAGAATAACAACAAAACCAAAGGTTAGCAGAAAAGATTGGGACTTCGAGGTCAGTGGATATTTCCCAGATAGAAGATGCAGCATCATTGATTCACAAGGCAATGCAGTAGCCCAGGTGAGATTATATTCTCTACTATGGAATAGAAAATATACTATAAACTACAGATTACTATTTACAAACCATATACTAAGCATGCATTCGCTGAAAGTTTTATTCTAAAGAAGCAAAAAGTTAGCCTTCTGTTATGGGGATGGTACGTGGGTTGTAGCCGCCCAAGTCCAAGCCCAAGCCCAAGCCCACCGCTAGTAGATATTGTCCTCTTTGGACTTTCACTTCAAGGGCTTCCCCTCAAAGTTTTAAAATGCGTATACACCCTTATAAGGAATGTTTTGTTCCCTTCTCCAACCAATGTGGGACCTCCTGATCCACCTCCCTTGGGCCCAACGTCCTCTCTGACCGGTGTCTGGCTTGACACCATTTGTAACAGCCCAATCCTACTACTAGTAGATATTGTTCTTTTTGGGTTCTCCCTTCAAGGGCTTTCCCTTCCAGGACTTTCCCTCAAGGTTTTAAAACGTGTTCACTAGGGAAAGGTTTCCACACCCTTAGAAGGAACATTTTGTTCCTCTCTCTATCCAATGTGGGATCTCACAATCCATTCCTCTTGGGCCCAGCGTTTTCGCTGGCAGACTGCCCAATGTCTGGGTCTGATATCATTTGTAACAACCCAAGCCCACCACAAGCAGATATTGTCCTCTTTGGATTTTCCCTCCAAGGACTTTCCCTCAAGGTTTTAAAATGCGTCCACTAGGAAAAGGTTTCCACACCCTTATAAGAAATGGCTTCGTTTCCCTCTCCAACCGATGTAGGACCTCACATGGTTACTGGAAAATAGGAACAGGTACCTGTTTGTCGAAGTTGTAGCTTGCTATCTACCAAATGAACCTTCACTGCAACAGCCCACATATGGCTTAATACTGTCCCATACAGCCTAAATATAACTGAAGAGAGTAGCTGTACTTGATTTTGGTCCTGTTCCCTCAGTAAAGCTAATATATTTCACACAGAGTTACATGTTAGAGATGTATATTAATCATGCTTCGAATAACTGCAGATCGGAACGATTAAAAAGACTGGAGAGCAGTTGAGCAAGGATATCTATTATGTTTCAATAAAACCTGGAGTCGATCAGGCCTTTATTGTTGGAGTTGTTGCCATTCTCGACAACATCTATGGCGAATCAACCAGCTGCTGA ATGATTCCCCTAGTTAGCAAATTCTACTGTTCGTCTTCCGAGGTTGTGTTTATCGTTAGGACGAGACCACACGTCATTAATGGAGGAGGTTTTGTTGTGACAGATTGTAATCAGAAAGTTGTTTTCAGTGTTGATGGGTGTGGGATTCTGGGAAAAGAAGAGGAGCTGGTTGTGAGGGATGAGAAGAGGGATGCTTTGCTTTTACTCCGTGGGAAGGGAGGGATTTTCGAGGCTCTAAGCTTTCATAAGATATGGAAGGCTTACAAATATGACTTCCAAGGATCTAAAAAGCTGGTTTTCAGCTTGAGAAGACCCAAGTCATGTCTTCCTGTGAAAAACGATGTTGGAATCAGAATAACAACAAAACCAAAGGTTAGCAGAAAAGATTGGGACTTCGAGGTCAGTGGATATTTCCCAGATAGAAGATGCAGCATCATTGATTCACAAGGCAATGCAGTAGCCCAGATCGGAACGATTAAAAAGACTGGAGAGCAGTTGAGCAAGGATATCTATTATGTTTCAATAAAACCTGGAGTCGATCAGGCCTTTATTGTTGGAGTTGTTGCCATTCTCGACAACATCTATGGCGAATCAACCAGCTGCTGA ATGATTCCCCTAGTTAGCAAATTCTACTGTTCGTCTTCCGAGGTTGTGTTTATCGTTAGGACGAGACCACACGTCATTAATGGAGGAGGTTTTGTTGTGACAGATTGTAATCAGAAAGTTGTTTTCAGTGTTGATGGGTGTGGGATTCTGGGAAAAGAAGAGGAGCTGGTTGTGAGGGATGAGAAGAGGGATGCTTTGCTTTTACTCCGTGGGAAGGGAGGGATTTTCGAGGCTCTAAGCTTTCATAAGATATGGAAGGCTTACAAATATGACTTCCAAGGATCTAAAAAGCTGGTTTTCAGCTTGAGAAGACCCAAGTCATGTCTTCCTGTGAAAAACGATGTTGGAATCAGAATAACAACAAAACCAAAGGTTAGCAGAAAAGATTGGGACTTCGAGGTCAGTGGATATTTCCCAGATAGAAGATGCAGCATCATTGATTCACAAGGCAATGCAGTAGCCCAGATCGGAACGATTAAAAAGACTGGAGAGCAGTTGAGCAAGGATATCTATTATGTTTCAATAAAACCTGGAGTCGATCAGGCCTTTATTGTTGGAGTTGTTGCCATTCTCGACAACATCTATGGCGAATCAACCAGCTGCTGA MIPLVSKFYCSSSEVVFIVRTRPHVINGGGFVVTDCNQKVVFSVDGCGILGKEEELVVRDEKRDALLLLRGKGGIFEALSFHKIWKAYKYDFQGSKKLVFSLRRPKSCLPVKNDVGIRITTKPKVSRKDWDFEVSGYFPDRRCSIIDSQGNAVAQIGTIKKTGEQLSKDIYYVSIKPGVDQAFIVGVVAILDNIYGESTSC
BLAST of Carg12951 vs. NCBI nr
Match: XP_022960806.1 (protein LURP-one-related 6-like [Cucurbita moschata]) HSP 1 Score: 410.6 bits (1054), Expect = 3.1e-111 Identity = 201/201 (100.00%), Postives = 201/201 (100.00%), Query Frame = 0
BLAST of Carg12951 vs. NCBI nr
Match: XP_023516165.1 (protein LURP-one-related 6-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 410.2 bits (1053), Expect = 4.0e-111 Identity = 200/201 (99.50%), Postives = 201/201 (100.00%), Query Frame = 0
BLAST of Carg12951 vs. NCBI nr
Match: XP_022987086.1 (protein LURP-one-related 6 [Cucurbita maxima]) HSP 1 Score: 408.7 bits (1049), Expect = 1.2e-110 Identity = 199/201 (99.00%), Postives = 201/201 (100.00%), Query Frame = 0
BLAST of Carg12951 vs. NCBI nr
Match: XP_008450937.1 (PREDICTED: protein LURP-one-related 6 [Cucumis melo]) HSP 1 Score: 374.4 bits (960), Expect = 2.4e-100 Identity = 174/201 (86.57%), Postives = 192/201 (95.52%), Query Frame = 0
BLAST of Carg12951 vs. NCBI nr
Match: XP_022147638.1 (protein LURP-one-related 6 [Momordica charantia]) HSP 1 Score: 360.9 bits (925), Expect = 2.8e-96 Identity = 170/201 (84.58%), Postives = 186/201 (92.54%), Query Frame = 0
BLAST of Carg12951 vs. TAIR10
Match: AT2G05910.1 (Protein of unknown function (DUF567)) HSP 1 Score: 216.5 bits (550), Expect = 1.5e-56 Identity = 112/203 (55.17%), Postives = 142/203 (69.95%), Query Frame = 0
BLAST of Carg12951 vs. TAIR10
Match: AT5G20640.1 (Protein of unknown function (DUF567)) HSP 1 Score: 142.1 bits (357), Expect = 3.7e-34 Identity = 76/168 (45.24%), Postives = 116/168 (69.05%), Query Frame = 0
BLAST of Carg12951 vs. TAIR10
Match: AT1G80120.1 (Protein of unknown function (DUF567)) HSP 1 Score: 80.5 bits (197), Expect = 1.3e-15 Identity = 59/199 (29.65%), Postives = 94/199 (47.24%), Query Frame = 0
BLAST of Carg12951 vs. TAIR10
Match: AT3G15810.1 (Protein of unknown function (DUF567)) HSP 1 Score: 72.8 bits (177), Expect = 2.7e-13 Identity = 54/198 (27.27%), Postives = 91/198 (45.96%), Query Frame = 0
BLAST of Carg12951 vs. TAIR10
Match: AT5G01750.2 (Protein of unknown function (DUF567)) HSP 1 Score: 69.7 bits (169), Expect = 2.3e-12 Identity = 50/196 (25.51%), Postives = 92/196 (46.94%), Query Frame = 0
BLAST of Carg12951 vs. Swiss-Prot
Match: sp|Q9ZUF7|LOR6_ARATH (Protein LURP-one-related 6 OS=Arabidopsis thaliana OX=3702 GN=At2g05910 PE=2 SV=1) HSP 1 Score: 216.5 bits (550), Expect = 2.8e-55 Identity = 112/203 (55.17%), Postives = 142/203 (69.95%), Query Frame = 0
BLAST of Carg12951 vs. Swiss-Prot
Match: sp|A0MFH4|LOR16_ARATH (Protein LURP-one-related 16 OS=Arabidopsis thaliana OX=3702 GN=At5g20640 PE=2 SV=2) HSP 1 Score: 142.1 bits (357), Expect = 6.6e-33 Identity = 76/168 (45.24%), Postives = 116/168 (69.05%), Query Frame = 0
BLAST of Carg12951 vs. Swiss-Prot
Match: sp|Q9SSC7|LOR5_ARATH (Protein LURP-one-related 5 OS=Arabidopsis thaliana OX=3702 GN=At1g80120 PE=2 SV=1) HSP 1 Score: 80.5 bits (197), Expect = 2.4e-14 Identity = 59/199 (29.65%), Postives = 94/199 (47.24%), Query Frame = 0
BLAST of Carg12951 vs. Swiss-Prot
Match: sp|Q9LVZ8|LOR12_ARATH (Protein LURP-one-related 12 OS=Arabidopsis thaliana OX=3702 GN=At3g15810 PE=2 SV=1) HSP 1 Score: 72.8 bits (177), Expect = 4.9e-12 Identity = 54/198 (27.27%), Postives = 91/198 (45.96%), Query Frame = 0
BLAST of Carg12951 vs. Swiss-Prot
Match: sp|Q9LZX1|LOR15_ARATH (Protein LURP-one-related 15 OS=Arabidopsis thaliana OX=3702 GN=At5g01750 PE=1 SV=1) HSP 1 Score: 69.7 bits (169), Expect = 4.2e-11 Identity = 50/196 (25.51%), Postives = 92/196 (46.94%), Query Frame = 0
BLAST of Carg12951 vs. TrEMBL
Match: tr|A0A1S3BQC6|A0A1S3BQC6_CUCME (protein LURP-one-related 6 OS=Cucumis melo OX=3656 GN=LOC103492375 PE=4 SV=1) HSP 1 Score: 374.4 bits (960), Expect = 1.6e-100 Identity = 174/201 (86.57%), Postives = 192/201 (95.52%), Query Frame = 0
BLAST of Carg12951 vs. TrEMBL
Match: tr|A0A0A0LWZ5|A0A0A0LWZ5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G597060 PE=4 SV=1) HSP 1 Score: 359.0 bits (920), Expect = 7.0e-96 Identity = 167/201 (83.08%), Postives = 190/201 (94.53%), Query Frame = 0
BLAST of Carg12951 vs. TrEMBL
Match: tr|A0A0D2R4J3|A0A0D2R4J3_GOSRA (Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_010G089100 PE=4 SV=1) HSP 1 Score: 266.2 bits (679), Expect = 6.2e-68 Identity = 129/203 (63.55%), Postives = 163/203 (80.30%), Query Frame = 0
BLAST of Carg12951 vs. TrEMBL
Match: tr|A0A2P5SEC8|A0A2P5SEC8_GOSBA (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_DD05568 PE=4 SV=1) HSP 1 Score: 266.2 bits (679), Expect = 6.2e-68 Identity = 129/203 (63.55%), Postives = 163/203 (80.30%), Query Frame = 0
BLAST of Carg12951 vs. TrEMBL
Match: tr|A0A1U8IWE6|A0A1U8IWE6_GOSHI (protein LURP-one-related 6-like OS=Gossypium hirsutum OX=3635 GN=LOC107901055 PE=4 SV=1) HSP 1 Score: 264.2 bits (674), Expect = 2.3e-67 Identity = 128/203 (63.05%), Postives = 162/203 (79.80%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene: |