CmoCh10G011480 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh10G011480
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	ATP binding;nucleic acid binding;helicases
Location	Cmo_Chr10 : 9699144 .. 9700631 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTTCTAAAGGCGAAAAGCTGTTTCAGTCAGATATAGAAATTGGGCCAAAACAATATTTGGTATAAGATATTTGGGTTCACTGATTTGTGTGTTGTAGTTCAATGATACAGAAATTGATCAAGGGATCAAGATTACTCGTTTTTCACCGAAATGTCTGCTTAATACATTTCCAATTGCTTAGTACTCACCGGCCAAACAAATTTGACCATGTGAGTCCTCATAAACAACATCAAAAGCTCCGTGAGCCCATTCCTTTCGTCACCGATGTTAAAGAGGTAAAGGATCCATGTGAGGCATTGGCTCTCTTCAAGGATTACCATGAAAGGGGATTCAAACACCACTATCCTTCCTACTCATCTCTCATCTACAAGTTGGCCCGTTCTCGTAGATTTGAAGCTGTCGAGATGATTCTTGGTCATTTACAAAATAGGAACATTCGCTGCAATGAGACCCTTTTTGTCGCTTTGATTCAACATTATGGGAAAGTCCATTTGGTTGAGAAAGGTATTGAGCTTTTCCATCGAATGCCTTCCTTTAATTGTTTTCGTAGTCGGCAGTCCTTGAATGTATTGCTTAATACACTAGTTGACTGTGACCAGTTTTCTAAAGCAAGTGAAATCTTCCAGCAGGCTTATGAAATGGGCTTCCGTCCTAATTCAGTGACCTATAATATAATGATCAAGGGTTGGATCAAGAAGGGTGAGTGGGAACAAGCGTGTAACCTGTTCAACGAAATGCTTGAGAAGAGGGTGCAACCTAGTGTAGTAACATACAATAGTCTTTTGGGGCTTTTGTGTAGAAATGGTGAAATGGACACAGCACTGTGTTTGTTTGAGAACATGATTCAGAAAGGAAATCATCCAAATGCTGTTACTTATGCATTGTTAATGGAAGGATGGTGCTTCATAGGTAAATACAAGGAAGCCAAAAAATTGATGTTCGATATGGAGTTTCATGGTTGTAAACCGCGGCCTGTGAATTATGGTGTTTTAATGACACATCTTGGAAAGACGGGGAACATCGACGAGGTGGAATCTTTACTAAATGAGATGAAGAAGAGACGTTTGAAGCCTGACGTTGTGACGTATAATATTCTTGTGAATTACCTGTGCAAGGAAGGAAGGGTTGAGGATGCTTATAAAGTATTGGTTAAAATGCAAGTTGGAGGTTGTAATCCTAATGCAGCAACTTATAGGATGATGATTGATGGGTTTTGTAATGCAGGGGACTTCGATGGGGCTATGAAGGTTTTGAATTCCATGTTGATGAGTGGGCACTGTCCTCGTTTACAAACTTTTGCTTCTTTAATTGTTGGCCTTTTGAGAGGCGAAAACAGTAACTATGTTTTCTTTGTCTTGGAGGAGATGGAAAAGCGACAGATGAGGTTTGACGCTGAAACTTGGAGGACTTTGGTTATGGATGCTTGTGGCCAGGATGTTGTTGATATAGGCAGCCGGATAAACGAGTTGATCTCCTTACAACACTGA

mRNA sequence

GTTTCTAAAGGCGAAAAGCTGTTTCAGTCAGATATAGAAATTGGGCCAAAACAATATTTGAAATTGATCAAGGGATCAAGATTACTCGTTTTTCACCGAAATGTCTGCTTAATACATTTCCAATTGCTTAGTACTCACCGGCCAAACAAATTTGACCATGTGAGTCCTCATAAACAACATCAAAAGCTCCGTGAGCCCATTCCTTTCGTCACCGATGTTAAAGAGGTAAAGGATCCATGTGAGGCATTGGCTCTCTTCAAGGATTACCATGAAAGGGGATTCAAACACCACTATCCTTCCTACTCATCTCTCATCTACAAGTTGGCCCGTTCTCGTAGATTTGAAGCTGTCGAGATGATTCTTGGTCATTTACAAAATAGGAACATTCGCTGCAATGAGACCCTTTTTGTCGCTTTGATTCAACATTATGGGAAAGTCCATTTGGTTGAGAAAGGTATTGAGCTTTTCCATCGAATGCCTTCCTTTAATTGTTTTCGTAGTCGGCAGTCCTTGAATGTATTGCTTAATACACTAGTTGACTGTGACCAGTTTTCTAAAGCAAGTGAAATCTTCCAGCAGGCTTATGAAATGGGCTTCCGTCCTAATTCAGTGACCTATAATATAATGATCAAGGGTTGGATCAAGAAGGGTGAGTGGGAACAAGCGTGTAACCTGTTCAACGAAATGCTTGAGAAGAGGGTGCAACCTAGTGTAGTAACATACAATAGTCTTTTGGGGCTTTTGTGTAGAAATGGTGAAATGGACACAGCACTGTGTTTGTTTGAGAACATGATTCAGAAAGGAAATCATCCAAATGCTGTTACTTATGCATTGTTAATGGAAGGATGGTGCTTCATAGGTAAATACAAGGAAGCCAAAAAATTGATGTTCGATATGGAGTTTCATGGTTGTAAACCGCGGCCTGTGAATTATGGTGTTTTAATGACACATCTTGGAAAGACGGGGAACATCGACGAGGTGGAATCTTTACTAAATGAGATGAAGAAGAGACGTTTGAAGCCTGACGTTGTGACGTATAATATTCTTGTGAATTACCTGTGCAAGGAAGGAAGGGTTGAGGATGCTTATAAAGTATTGGTTAAAATGCAAGTTGGAGGTTGTAATCCTAATGCAGCAACTTATAGGATGATGATTGATGGGTTTTGTAATGCAGGGGACTTCGATGGGGCTATGAAGGTTTTGAATTCCATGTTGATGAGTGGGCACTGTCCTCGTTTACAAACTTTTGCTTCTTTAATTGTTGGCCTTTTGAGAGGCGAAAACAGTAACTATGTTTTCTTTGTCTTGGAGGAGATGGAAAAGCGACAGATGAGGTTTGACGCTGAAACTTGGAGGACTTTGGTTATGGATGCTTGTGGCCAGGATGTTGTTGATATAGGCAGCCGGATAAACGAGTTGATCTCCTTACAACACTGA

Coding sequence (CDS)

GTTTCTAAAGGCGAAAAGCTGTTTCAGTCAGATATAGAAATTGGGCCAAAACAATATTTGAAATTGATCAAGGGATCAAGATTACTCGTTTTTCACCGAAATGTCTGCTTAATACATTTCCAATTGCTTAGTACTCACCGGCCAAACAAATTTGACCATGTGAGTCCTCATAAACAACATCAAAAGCTCCGTGAGCCCATTCCTTTCGTCACCGATGTTAAAGAGGTAAAGGATCCATGTGAGGCATTGGCTCTCTTCAAGGATTACCATGAAAGGGGATTCAAACACCACTATCCTTCCTACTCATCTCTCATCTACAAGTTGGCCCGTTCTCGTAGATTTGAAGCTGTCGAGATGATTCTTGGTCATTTACAAAATAGGAACATTCGCTGCAATGAGACCCTTTTTGTCGCTTTGATTCAACATTATGGGAAAGTCCATTTGGTTGAGAAAGGTATTGAGCTTTTCCATCGAATGCCTTCCTTTAATTGTTTTCGTAGTCGGCAGTCCTTGAATGTATTGCTTAATACACTAGTTGACTGTGACCAGTTTTCTAAAGCAAGTGAAATCTTCCAGCAGGCTTATGAAATGGGCTTCCGTCCTAATTCAGTGACCTATAATATAATGATCAAGGGTTGGATCAAGAAGGGTGAGTGGGAACAAGCGTGTAACCTGTTCAACGAAATGCTTGAGAAGAGGGTGCAACCTAGTGTAGTAACATACAATAGTCTTTTGGGGCTTTTGTGTAGAAATGGTGAAATGGACACAGCACTGTGTTTGTTTGAGAACATGATTCAGAAAGGAAATCATCCAAATGCTGTTACTTATGCATTGTTAATGGAAGGATGGTGCTTCATAGGTAAATACAAGGAAGCCAAAAAATTGATGTTCGATATGGAGTTTCATGGTTGTAAACCGCGGCCTGTGAATTATGGTGTTTTAATGACACATCTTGGAAAGACGGGGAACATCGACGAGGTGGAATCTTTACTAAATGAGATGAAGAAGAGACGTTTGAAGCCTGACGTTGTGACGTATAATATTCTTGTGAATTACCTGTGCAAGGAAGGAAGGGTTGAGGATGCTTATAAAGTATTGGTTAAAATGCAAGTTGGAGGTTGTAATCCTAATGCAGCAACTTATAGGATGATGATTGATGGGTTTTGTAATGCAGGGGACTTCGATGGGGCTATGAAGGTTTTGAATTCCATGTTGATGAGTGGGCACTGTCCTCGTTTACAAACTTTTGCTTCTTTAATTGTTGGCCTTTTGAGAGGCGAAAACAGTAACTATGTTTTCTTTGTCTTGGAGGAGATGGAAAAGCGACAGATGAGGTTTGACGCTGAAACTTGGAGGACTTTGGTTATGGATGCTTGTGGCCAGGATGTTGTTGATATAGGCAGCCGGATAAACGAGTTGATCTCCTTACAACACTGA

Homology

[Close]

BLAST of CmoCh10G011480 vs. Swiss-Prot
Match: PPR20_ARATH (Pentatricopeptide repeat-containing protein At1g07740, mitochondrial OS=Arabidopsis thaliana GN=At1g07740 PE=2 SV=1)

HSP 1 Score: 499.6 bits (1285), Expect = 3.8e-140
Identity = 247/452 (54.65%), Postives = 318/452 (70.35%), Query Frame = 1


Query: 30  VFHRNVCLIHFQLLSTHRPNK-----FDHVSPHKQHQKLREPIPFVTDVKEVKDPCEALA 89
           V   N C+   +   T RP K       H   HK  +K  E +PF+TD+KE++DP EAL+
Sbjct: 8   VLINNQCIASQRHYHTSRPEKPTKKASSHEPTHKFTRKPWEEVPFLTDLKEIEDPEEALS 67

Query: 90  LFKDYHERGFKHHYPSYSSLIYKLARSRRFEAVEMILGHLQNRNIRCNETLFVALIQHYG 149
           LF  Y E GF+H YPSYSSLIYKLA+SR F+AV+ IL  ++ RN+RC E+LF+ LIQHYG
Sbjct: 68  LFHQYQEMGFRHDYPSYSSLIYKLAKSRNFDAVDQILRLVRYRNVRCRESLFMGLIQHYG 127

Query: 150 KVHLVEKGIELFHRMPSFNCFRSRQSLNVLLNTLVDCDQFSKASEIFQQAYEMGFRPNSV 209
           K   V+K I++FH++ SF+C R+ QSLN L+N LVD  +  KA   F  A +M  RPNSV
Sbjct: 128 KAGSVDKAIDVFHKITSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDGAKDMRLRPNSV 187

Query: 210 TYNIMIKGWIKKGEWEQACNLFNEMLEKRVQPSVVTYNSLLGLLCRNGEMDTALCLFENM 269
           ++NI+IKG++ K +WE AC +F+EMLE  VQPSVVTYNSL+G LCRN +M  A  L E+M
Sbjct: 188 SFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAKSLLEDM 247

Query: 270 IQKGNHPNAVTYALLMEGWCFIGKYKEAKKLMFDMEFHGCKPRPVNYGVLMTHLGKTGNI 329
           I+K   PNAVT+ LLM+G C  G+Y EAKKLMFDME+ GCKP  VNYG+LM+ LGK G I
Sbjct: 248 IKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSDLGKRGRI 307

Query: 330 DEVESLLNEMKKRRLKPDVVTYNILVNYLCKEGRVEDAYKVLVKMQVGGCNPNAATYRMM 389
           DE + LL EMKKRR+KPDVV YNILVN+LC E RV +AY+VL +MQ+ GC PNAATYRMM
Sbjct: 308 DEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQMKGCKPNAATYRMM 367

Query: 390 IDGFCNAGDFDGAMKVLNSMLMSGHCPRLQTFASLIVGLLRGENSNYVFFVLEEMEKRQM 449
           IDGFC   DFD  + VLN+ML S HCP   TF  ++ GL++G N ++  FVLE M K+ +
Sbjct: 368 IDGFCRIEDFDSGLNVLNAMLASRHCPTPATFVCMVAGLIKGGNLDHACFVLEVMGKKNL 427

Query: 450 RFDAETWRTLVMDACGQDVVDIGSRINELISL 477
            F +  W+ L+ D C +D       ++E+IS+
Sbjct: 428 SFGSGAWQNLLSDLCIKDGGVYCEALSEVISI 459

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BLAST of CmoCh10G011480 vs. Swiss-Prot
Match: PP388_ARATH (Pentatricopeptide repeat-containing protein At5g16420, mitochondrial OS=Arabidopsis thaliana GN=At5g16420 PE=2 SV=1)

HSP 1 Score: 217.6 bits (553), Expect = 2.9e-55
Identity = 133/462 (28.79%), Postives = 233/462 (50.43%), Query Frame = 1


Query: 14  IGPKQYLKLIKGSRLLVFHRNVCLIHFQLLSTHRPNKFDHVSPHKQHQKLREPIPFVTDV 73
           + P ++   +   RL  F  +      Q   T +P     + P  Q    +  +  +T  
Sbjct: 6   VNPTRFPPFVASRRL--FSASASAASLQQYCTEKPP----IKPWPQRLFPKRLVSMITQQ 65

Query: 74  KEVKDPCEALALFKDYHERGFKHHYPSYSSLIYKLARSRRFEAVEMILGHLQNRN--IRC 133
           + + D    + L+      GF H+Y +Y S+++KL+R+R F+ VE ++  L+N    I+C
Sbjct: 66  QNI-DLALQIFLYAGKSHPGFTHNYDTYHSILFKLSRARAFDPVESLMADLRNSYPPIKC 125

Query: 134 NETLFVALIQHYGKVHLVEKGIELFHRMPSFNCFRSRQSLNVLLNTLVDCDQFSKASEIF 193
            E LF+ L+++YG     E  + +F R+P F   RS +SLN LLN L+   +F     +F
Sbjct: 126 GENLFIDLLRNYGLAGRYESSMRIFLRIPDFGVKRSVRSLNTLLNVLIQNQRFDLVHAMF 185

Query: 194 QQAYE-MGFRPNSVTYNIMIKGWIKKGEWEQACNLFNEMLEKRVQPSVVTYNSLLGLLCR 253
           + + E  G  PN  T N+++K   KK + E A  + +E+    + P++VTY ++LG    
Sbjct: 186 KNSKESFGITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVA 245

Query: 254 NGEMDTALCLFENMIQKGNHPNAVTYALLMEGWCFIGKYKEAKKLMFDMEFHGCKPRPVN 313
            G+M++A  + E M+ +G +P+A TY +LM+G+C +G++ EA  +M DME +  +P  V 
Sbjct: 246 RGDMESAKRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVT 305

Query: 314 YGVLMTHLGKTGNIDEVESLLNEMKKRRLKPDVVTYNILVNYLCKEGRVEDAYKVLVKMQ 373
           YGV++  L K     E  ++ +EM +R   PD      +++ LC++ +V++A  +  KM 
Sbjct: 306 YGVMIRALCKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKML 365

Query: 374 VGGCNPNAATYRMMIDGFCNAGDFDGAMKVLNSMLMSGHCPRLQTFASLIVGLLRGENSN 433
              C P+ A    +I   C  G    A K+ +     G  P L T+ +LI G+       
Sbjct: 366 KNNCMPDNALLSTLIHWLCKEGRVTEARKLFDE-FEKGSIPSLLTYNTLIAGMCEKGELT 425

Query: 434 YVFFVLEEMEKRQMRFDAETWRTLVMDACGQDVVDIGSRINE 473
               + ++M +R+ + +A T+  L+        V  G R+ E
Sbjct: 426 EAGRLWDDMYERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLE 459

[Close]

BLAST of CmoCh10G011480 vs. Swiss-Prot
Match: PP392_ARATH (Pentatricopeptide repeat-containing protein At5g18475 OS=Arabidopsis thaliana GN=At5g18475 PE=2 SV=1)

HSP 1 Score: 194.9 bits (494), Expect = 2.0e-48
Identity = 124/409 (30.32%), Postives = 216/409 (52.81%), Query Frame = 1


Query: 70  VTDVKEVKDPCEALALF-KDYHERGFKHHYPSYSSLIYKLARSRRFEAVEMILGHLQNRN 129
           V+ +K  +DP   L +F K   ++GF H+  +YS L+  L R ++F AV+ IL  ++   
Sbjct: 60  VSLMKRERDPQGVLDIFNKASQQKGFNHNNATYSVLLDNLVRHKKFLAVDAILHQMKYET 119

Query: 130 IRCNETLFVALIQHYGKVHLVEKGIELFHRMPSFNCFRSRQSLNVL---LNTLVDCDQFS 189
            R  E+LF+ L++H+ +  L +K +E+F+ +      R + SLN +   LN L+D  + +
Sbjct: 120 CRFQESLFLNLMRHFSRSDLHDKVMEMFNLIQVIA--RVKPSLNAISTCLNLLIDSGEVN 179

Query: 190 KASEIFQQA-YEMGFRPNSVTYNIMIKGWIKKGEWEQACNLFNEMLEKRVQ-PSVVTYNS 249
            + ++   A + +G +PN+  +NI++K   K G+   A  +  EM    +  P+ +TY++
Sbjct: 180 LSRKLLLYAKHNLGLQPNTCIFNILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYST 239

Query: 250 LLGLLCRNGEMDTALCLFENMIQK-GNHPNAVTYALLMEGWCFIGKYKEAKKLMFDMEFH 309
           L+  L  +     A+ LFE+MI K G  P+ VT+ +++ G+C  G+ + AKK++  M+ +
Sbjct: 240 LMDCLFAHSRSKEAVELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKN 299

Query: 310 GCKPRPVNYGVLMTHLGKTGNIDEVESLLNEMKKRRLKPDVVTYNILVNYLCKEGRVEDA 369
           GC P   NY  LM    K G I E +   +E+KK  LK D V Y  L+N  C+ G  ++A
Sbjct: 300 GCNPNVYNYSALMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEA 359

Query: 370 YKVLVKMQVGGCNPNAATYRMMIDGFCNAGDFDGAMKVLNSMLMSGHCPRLQTFASLIVG 429
            K+L +M+   C  +  TY +++ G  + G  + A+++L+     G      ++  ++  
Sbjct: 360 MKLLGEMKASRCRADTLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRIILNA 419

Query: 430 L-LRGENSNYVFFVLEEMEKRQMRFDAETWRTLVMDACGQDVVDIGSRI 471
           L   GE    V F L  M +R +     TW  LV+  C     +IG R+
Sbjct: 420 LCCNGELEKAVKF-LSVMSERGIWPHHATWNELVVRLCESGYTEIGVRV 465

[Close]

BLAST of CmoCh10G011480 vs. Swiss-Prot
Match: PP418_ARATH (Pentatricopeptide repeat-containing protein At5g46100 OS=Arabidopsis thaliana GN=At5g46100 PE=2 SV=1)

HSP 1 Score: 187.6 bits (475), Expect = 3.2e-46
Identity = 113/404 (27.97%), Postives = 200/404 (49.50%), Query Frame = 1


Query: 66  PIPFVTDVKEVKDPCEALALFKDY---HERGFKHHYPSYSSLIYKLARSRRFEAVEMILG 125
           P   +  ++  KD  +++A+F      +  G+ H   S+  ++ +L  + +F+A E ++ 
Sbjct: 16  PSQVIKLMRAEKDVEKSMAVFDSATAEYANGYVHDQSSFGYMVLRLVSANKFKAAEDLIV 75

Query: 126 HLQNRNIRCNETLFVALIQHYGKVHLVEKGIELFHRMPSFNCFRSRQSLNVLLNTLVDCD 185
            ++  N   +E + +++ + YG+VH     + +FH+M  F+C  S+++   +L  LV+ +
Sbjct: 76  RMKIENCVVSEDILLSICRGYGRVHRPFDSLRVFHKMKDFDCDPSQKAYVTVLAILVEEN 135

Query: 186 QFSKASEIFQQAYEMGFRPNSVTYNIMIKGWIKK-GEWEQACNLFNEMLEKRVQPSVVTY 245
           Q + A + ++   E+G  P   + N++IK   +  G  +    +F EM ++   P   TY
Sbjct: 136 QLNLAFKFYKNMREIGLPPTVASLNVLIKALCRNDGTVDAGLKIFLEMPKRGCDPDSYTY 195

Query: 246 NSLLGLLCRNGEMDTALCLFENMIQKGNHPNAVTYALLMEGWCFIGKYKEAKKLMFDMEF 305
            +L+  LCR G +D A  LF  M++K   P  VTY  L+ G C      EA + + +M+ 
Sbjct: 196 GTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMKS 255

Query: 306 HGCKPRPVNYGVLMTHLGKTGNIDEVESLLNEMKKRRLKPDVVTYNILVNYLCKEGRVED 365
            G +P    Y  LM  L K G   +   L   M  R  +P++VTY  L+  LCKE ++++
Sbjct: 256 KGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQE 315

Query: 366 AYKVLVKMQVGGCNPNAATYRMMIDGFCNAGDFDGAMKVLNSMLMSGHCPRLQTF---AS 425
           A ++L +M + G  P+A  Y  +I GFC    F  A   L+ M++ G  P   T+     
Sbjct: 316 AVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFLDEMILGGITPNRLTWNIHVK 375

Query: 426 LIVGLLRGENSNY---VFFVLEEMEKRQMRFDAETWRTLVMDAC 460
               ++RG  +NY    F +   M  R +  + ET  +LV   C
Sbjct: 376 TSNEVVRGLCANYPSRAFTLYLSMRSRGISVEVETLESLVKCLC 419

[Close]

BLAST of CmoCh10G011480 vs. Swiss-Prot
Match: PPR79_ARATH (Putative pentatricopeptide repeat-containing protein At1g53330 OS=Arabidopsis thaliana GN=At1g53330 PE=3 SV=1)

HSP 1 Score: 185.7 bits (470), Expect = 1.2e-45
Identity = 115/375 (30.67%), Postives = 193/375 (51.47%), Query Frame = 1


Query: 73  VKEVKDPCEALALFKDYH------ERGFKHHYPSYSSLIYKLARSRRFEAVEMILGHLQ- 132
           ++   DP  A+ LF++        +R F++    Y  +I KL  S+ F+ ++ +L HL+ 
Sbjct: 16  LRRENDPSAAMKLFRNPDPESTNPKRPFRYSLLCYDIIITKLGGSKMFDELDQVLLHLKT 75

Query: 133 NRNIRCNETLFVALIQHYGKVHLVEKGIELFHRMPSFNCFRSRQSLNVLLNTLVDCDQFS 192
           +  I   E +F  +I  +G+  L  + + +F  MP + C R+ +SLN LL+ L+ C +  
Sbjct: 76  DTRIVPTEIIFCNVINFFGRGKLPSRALHMFDEMPQYRCQRTVKSLNSLLSALLKCGELE 135

Query: 193 KASEIFQQAYEMGFRPNSVTYNIMIKGWIKKGEWEQACNLFNEMLEKRVQPSVVTYNSLL 252
           K  E      E G +P++ TYNI+I G  + G ++ A  LF+EM++K+V+P+ VT+ +L+
Sbjct: 136 KMKERLSSIDEFG-KPDACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTFGTLI 195

Query: 253 GLLCRNGEMDTALCLFENMIQK-GNHPNAVTYALLMEGWCFIGKYKEAKKLMFDMEFHGC 312
             LC++  +  AL +  +M++  G  P    YA L++  C IG+   A KL  +      
Sbjct: 196 HGLCKDSRVKEALKMKHDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEGKI 255

Query: 313 KPRPVNYGVLMTHLGKTGNIDEVESLLNEMKKRRLKPDVVTYNILVNYLCKEGRVEDAYK 372
           K     Y  L++ L K G  +EV  +L EM ++  KPD VTYN+L+N  C E   E A +
Sbjct: 256 KVDAAIYSTLISSLIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANR 315

Query: 373 VLVKMQVGGCNPNAATYRMMIDGFCNAGDFDGAMKVLNSMLMSGHCPRLQTFASLIVGLL 432
           VL +M   G  P+  +Y M++  F     ++ A  +   M   G  P   ++  +  GL 
Sbjct: 316 VLDEMVEKGLKPDVISYNMILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIVFDGLC 375

Query: 433 RGENSNYVFFVLEEM 440
            G        +L+EM
Sbjct: 376 EGLQFEEAAVILDEM 389

[Close]

BLAST of CmoCh10G011480 vs. TrEMBL
Match: A0A0A0M1K9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G570750 PE=4 SV=1)

HSP 1 Score: 818.9 bits (2114), Expect = 3.2e-234
Identity = 395/457 (86.43%), Postives = 427/457 (93.44%), Query Frame = 1


Query: 21  KLIKGSRLLVFHRNVCLIHFQLLSTHRPNKFDHVSPHKQHQKLREPIPFVTDVKEVKDPC 80
           KLIK SRLL+FHRNVCLI FQLLST  PNKFD  + HKQ +K+RE IPFVTDVKEVKDPC
Sbjct: 4   KLIKRSRLLIFHRNVCLIRFQLLSTFSPNKFDFENNHKQRRKIRERIPFVTDVKEVKDPC 63

Query: 81  EALALFKDYHERGFKHHYPSYSSLIYKLARSRRFEAVEMILGHLQNRNIRCNETLFVALI 140
           EALALF++YHE+GFKHHYPSYSSLIYKLARSRRFEAVE ILGHL+NRNIRCNETLFVALI
Sbjct: 64  EALALFENYHEKGFKHHYPSYSSLIYKLARSRRFEAVETILGHLRNRNIRCNETLFVALI 123

Query: 141 QHYGKVHLVEKGIELFHRMPSFNCFRSRQSLNVLLNTLVDCDQFSKASEIFQQAYEMGFR 200
           QHYGK HLVEKGIELFH+MPSFNCFR+ QS NVLLNTLVDCDQFSKASEIFQQAYEM FR
Sbjct: 124 QHYGKAHLVEKGIELFHQMPSFNCFRTLQSFNVLLNTLVDCDQFSKASEIFQQAYEMDFR 183

Query: 201 PNSVTYNIMIKGWIKKGEWEQACNLFNEMLEKRVQPSVVTYNSLLGLLCRNGEMDTALCL 260
           PNSV+YNIMIKGWIKKG WEQACNLF+EMLEK VQPSVVTYNS LG+LCR GEMDTALCL
Sbjct: 184 PNSVSYNIMIKGWIKKGGWEQACNLFDEMLEKGVQPSVVTYNSFLGVLCRKGEMDTALCL 243

Query: 261 FENMIQKGNHPNAVTYALLMEGWCFIGKYKEAKKLMFDMEFHGCKPRPVNYGVLMTHLGK 320
           F+NM +KG+HPNAVTYALLMEGWCFIGKYKEAKKLMFDMEFHGCK RPVNYGVLMTHLGK
Sbjct: 244 FKNMTEKGHHPNAVTYALLMEGWCFIGKYKEAKKLMFDMEFHGCKLRPVNYGVLMTHLGK 303

Query: 321 TGNIDEVESLLNEMKKRRLKPDVVTYNILVNYLCKEGRVEDAYKVLVKMQVGGCNPNAAT 380
           TGNIDE+ESLLNEMKKRRLKPDVVTYNILVNYLCKEG+V DAYKVLVKMQVGGC+PNAAT
Sbjct: 304 TGNIDEMESLLNEMKKRRLKPDVVTYNILVNYLCKEGKVGDAYKVLVKMQVGGCDPNAAT 363

Query: 381 YRMMIDGFCNAGDFDGAMKVLNSMLMSGHCPRLQTFASLIVGLLRGENS-NYVFFVLEEM 440
           YRMMIDG+CNAGDFDGAMK+LN+MLMSGH P L+TFASL+VGLL+GEN+ +YV FVLEEM
Sbjct: 364 YRMMIDGYCNAGDFDGAMKILNAMLMSGHYPHLKTFASLVVGLLKGENNDDYVCFVLEEM 423

Query: 441 EKRQMRFDAETWRTLVMDACGQDVVDIGSRINELISL 477
           EKRQ+RFDAETWR L+MD CGQ  V+IGS +N+LISL
Sbjct: 424 EKRQLRFDAETWRILIMDVCGQH-VEIGSHLNDLISL 459

[Close]

BLAST of CmoCh10G011480 vs. TrEMBL
Match: M5W9F4_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa015993mg PE=4 SV=1)

HSP 1 Score: 574.7 bits (1480), Expect = 1.0e-160
Identity = 278/436 (63.76%), Postives = 344/436 (78.90%), Query Frame = 1


Query: 45  THRPNKFDHVSP-----HKQHQKLREPIPFVTDVKEVKDPCEALALFKDYHERGFKHHYP 104
           T RPNK     P     H+   KLR PIPFV+DVKEV+DP E L+LF +YH+ GFKH YP
Sbjct: 32  TFRPNK-PKTKPRRERLHRDTTKLRRPIPFVSDVKEVEDPEEGLSLFYEYHQMGFKHDYP 91

Query: 105 SYSSLIYKLARSRRFEAVEMILGHLQNRNIRCNETLFVALIQHYGKVHLVEKGIELFHRM 164
           SYS+L+YKLARSR FEAVE ILGH+++RNI C +TLF+ALIQHYGK +LVEK IELF++M
Sbjct: 92  SYSALLYKLARSRNFEAVETILGHVRDRNIHCKDTLFIALIQHYGKANLVEKAIELFNQM 151

Query: 165 PSFNCFRSRQSLNVLLNTLVDCDQFSKASEIFQQAYEMGFRPNSVTYNIMIKGWIKKGEW 224
           PSFNC R+ Q+ N LLN LVD  +F +A EIF +  +MG RPNS++YNIM+KGW++KG+ 
Sbjct: 152 PSFNCVRTLQAFNALLNVLVDSGRFVEADEIFGRCSKMGLRPNSISYNIMMKGWLQKGDG 211

Query: 225 EQACNLFNEMLEKRVQPSVVTYNSLLGLLCRNGEMDTALCLFENMIQKGNHPNAVTYALL 284
           E+AC +F+EMLEK+VQPSVVTYNSL+G   R GE++ A  L E+M QKG +PNAVTYALL
Sbjct: 212 EEACKVFDEMLEKKVQPSVVTYNSLIGFFGRKGELEKANGLLEDMKQKGKYPNAVTYALL 271

Query: 285 MEGWCFIGKYKEAKKLMFDMEFHGCKPRPVNYGVLMTHLGKTGNIDEVESLLNEMKKRRL 344
           MEG+C +GK++EAKK+MFDME+ GCKPR +NYGVLM+ LG+ G IDE +SLL EMKKRR 
Sbjct: 272 MEGFCMLGKHEEAKKMMFDMEYRGCKPRLLNYGVLMSDLGRRGKIDEAKSLLQEMKKRRF 331

Query: 345 KPDVVTYNILVNYLCKEGRVEDAYKVLVKMQVGGCNPNAATYRMMIDGFCNAGDFDGAMK 404
           KPDVV YNIL+N+LCKEGR  +AYKVL++MQVGGC PNAATYRMM+DGFC   DF+G +K
Sbjct: 332 KPDVVLYNILINFLCKEGRAAEAYKVLIEMQVGGCVPNAATYRMMVDGFCQIEDFEGGLK 391

Query: 405 VLNSMLMSGHCPRLQTFASLIVGLLRGENSNYVFFVLEEMEKRQMRFDAETWRTLVMDAC 464
           VL +ML S HCPRL+TF  L+ GL++    +  F VLEEMEKR M+F  E W  LV+DAC
Sbjct: 392 VLIAMLTSRHCPRLETFECLVTGLVKCGKIDDAFVVLEEMEKRNMQFCFEAWEALVVDAC 451

Query: 465 GQDVVDIGSRINELIS 476
           G++VV  G  + ELIS
Sbjct: 452 GENVV-AGEVVTELIS 465

[Close]

BLAST of CmoCh10G011480 vs. TrEMBL
Match: V4UF73_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10030177mg PE=4 SV=1)

HSP 1 Score: 557.8 bits (1436), Expect = 1.3e-155
Identity = 266/452 (58.85%), Postives = 343/452 (75.88%), Query Frame = 1


Query: 21  KLIKGSRLLVFHRNVCLIHFQLLSTH-------------RPNKFDHVSPHKQHQKLREPI 80
           K+I  ++L++ H+  C+ +      H             +P +  +   HK  +K +EPI
Sbjct: 7   KVINQTKLVLLHQRQCINYIPSQQKHTFTPKKPKPKPSTKPRRKQNPQNHKTIRKTKEPI 66

Query: 81  PFVTDVKEVKDPCEALALFKDYHERGFKHHYPSYSSLIYKLARSRRFEAVEMILGHLQNR 140
           PFV D+KE++DP EAL+LF  +H+ G KH YPSY+SLIYKLAR+R F+AVE +LG++Q+ 
Sbjct: 67  PFVNDLKEIRDPDEALSLFHRHHQMGSKHSYPSYASLIYKLARARDFDAVETVLGYIQDF 126

Query: 141 NIRCNETLFVALIQHYGKVHLVEKGIELFHRMPSFNCFRSRQSLNVLLNTLVDCDQFSKA 200
           NIRC ETLF++LIQHYGK HLV+K IE+F+RM SF+C R+ QS N LL+ LVD D+   A
Sbjct: 127 NIRCKETLFISLIQHYGKAHLVDKAIEVFNRMTSFDCVRTLQSFNSLLDILVDNDRVDDA 186

Query: 201 SEIFQQAYEMGFRPNSVTYNIMIKGWIKKGEWEQACNLFNEMLEKRVQPSVVTYNSLLGL 260
             +F  AY+MGFRPN +++N+MIKG +KKGEWE+A  +F+EMLE+ V P+VVTYNSL+G 
Sbjct: 187 KRMFDDAYKMGFRPNLISFNVMIKGRLKKGEWEEASRVFDEMLEREVPPTVVTYNSLVGF 246

Query: 261 LCRNGEMDTALCLFENMIQKGNHPNAVTYALLMEGWCFIGKYKEAKKLMFDMEFHGCKPR 320
           LCR GEM+ A  LFE+MI+KG +PNAVTYALLMEG CF G+Y EAKK+MFDM + GCKP+
Sbjct: 247 LCRKGEMEKAKGLFEDMIKKGTYPNAVTYALLMEGLCFKGEYNEAKKMMFDMAYRGCKPQ 306

Query: 321 PVNYGVLMTHLGKTGNIDEVESLLNEMKKRRLKPDVVTYNILVNYLCKEGRVEDAYKVLV 380
            VN+GVLM+ LGK G I+E +SLL+EMKKR+ KPDVVTYNIL+NYLCKE R   AYKVL 
Sbjct: 307 LVNFGVLMSDLGKRGKIEEAKSLLSEMKKRQYKPDVVTYNILINYLCKEDRAAGAYKVLT 366

Query: 381 KMQVGGCNPNAATYRMMIDGFCNAGDFDGAMKVLNSMLMSGHCPRLQTFASLIVGLLRGE 440
           +MQ+GGC PNAATYR M+DGF    DF+G++KVLN+ML S HCPRL+TF+ L+VGLL+G 
Sbjct: 367 EMQIGGCKPNAATYRTMVDGFLRVEDFEGSLKVLNAMLTSRHCPRLETFSCLLVGLLKGG 426

Query: 441 NSNYVFFVLEEMEKRQMRFDAETWRTLVMDAC 460
             +   FVLEEMEKR+MRFD + W  LV DAC
Sbjct: 427 KVDDACFVLEEMEKRKMRFDLKAWEGLVTDAC 458

[Close]

BLAST of CmoCh10G011480 vs. TrEMBL
Match: A0A061GWH8_THECC (Tetratricopeptide repeat-like superfamily protein OS=Theobroma cacao GN=TCM_041916 PE=4 SV=1)

HSP 1 Score: 557.4 bits (1435), Expect = 1.7e-155
Identity = 274/461 (59.44%), Postives = 343/461 (74.40%), Query Frame = 1


Query: 7   LFQSDIEIG-PKQYLKLIKGSRLLVFHRNVCLIHFQLLSTHRPN-KFDHVSPHKQHQKLR 66
           +F S   +  P   ++ I     ++ HR+    H+      +P  K DH +P K  +  R
Sbjct: 478 MFHSSSRVSRPINQIQRILVKHFVIIHRHSK--HYHTFGPKKPTTKPDHETPQKTTKNRR 537

Query: 67  E---PIPFVTDVKEVKDPCEALALFKDYHERGFKHHYPSYSSLIYKLARSRRFEAVEMIL 126
               P PFVT++KE+++P EAL+LF +Y++ G+KH YPSYSSLIYKLA+SR FEAVE +L
Sbjct: 538 RKWPPNPFVTNLKEIQEPDEALSLFHEYYQMGYKHDYPSYSSLIYKLAKSRNFEAVETLL 597

Query: 127 GHLQNRNIRCNETLFVALIQHYGKVHLVEKGIELFHRMPSFNCFRSRQSLNVLLNTLVDC 186
           G+LQN NI C ETLF AL + YGK  L+EK IELFH+MPSFNC R+ QSLN +LN LVD 
Sbjct: 598 GYLQNLNIHCQETLFNALFESYGKARLIEKAIELFHKMPSFNCVRTVQSLNSVLNALVDN 657

Query: 187 DQFSKASEIFQQAYEMGFRPNSVTYNIMIKGWIKKGEWEQACNLFNEMLEKRVQPSVVTY 246
           D+F  A  IF ++ +MGFRPNS T+N+MIKG +K+  +++AC LF+EMLE+ V+PSVVTY
Sbjct: 658 DRFFDAKVIFDKSPKMGFRPNSTTFNVMIKGLLKREAFDEACCLFDEMLERNVEPSVVTY 717

Query: 247 NSLLGLLCRNGEMDTALCLFENMIQKGNHPNAVTYALLMEGWCFIGKYKEAKKLMFDMEF 306
           NS +G LC+ GEM+ A  L E+M++KG +PNAVTYALLMEG C +GKYKEAKKLMFDME+
Sbjct: 718 NSFIGFLCKKGEMENAEGLVEDMVKKGKYPNAVTYALLMEGLCSLGKYKEAKKLMFDMEY 777

Query: 307 HGCKPRPVNYGVLMTHLGKTGNIDEVESLLNEMKKRRLKPDVVTYNILVNYLCKEGRVED 366
            GCK + +N+GVLMT+LGK G I+E +SLL EMKKRR KPDVV YNILVNYLCKEGRV +
Sbjct: 778 KGCKTKVINFGVLMTYLGKRGEIEEAKSLLREMKKRRFKPDVVIYNILVNYLCKEGRVGE 837

Query: 367 AYKVLVKMQVGGCNPNAATYRMMIDGFCNAGDFDGAMKVLNSMLMSGHCPRLQTFASLIV 426
           AYKVL++MQV GC PNAATYRMM+DGFC  GD +GA+KVLN M  SGHCPRL+T   L+ 
Sbjct: 838 AYKVLIEMQVKGCEPNAATYRMMVDGFCMVGDLEGALKVLNVMFTSGHCPRLETLCQLVT 897

Query: 427 GLLRGENSNYVFFVLEEMEKRQMRFDAETWRTLVMDACGQD 463
           GLL+    +   FVLEEMEKR+M FD E W  LV DACG D
Sbjct: 898 GLLKCGKIDGACFVLEEMEKRKMSFDLEAWGALVRDACGGD 936

[Close]

BLAST of CmoCh10G011480 vs. TrEMBL
Match: W9SCB5_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_010855 PE=4 SV=1)

HSP 1 Score: 553.5 bits (1425), Expect = 2.5e-154
Identity = 259/414 (62.56%), Postives = 334/414 (80.68%), Query Frame = 1


Query: 50  KFDHVSPHKQHQKLREPIPFVTDVKEVKDPCEALALFKDYHER-GFKHHYPSYSSLIYKL 109
           K  H   HK   +LR+P PFV++VK+ +DP EAL+LF+DY +  GFKH Y SYS+LIYKL
Sbjct: 34  KPSHERSHKATTELRKPTPFVSNVKQAQDPEEALSLFQDYQQNIGFKHDYASYSALIYKL 93

Query: 110 ARSRRFEAVEMILGHLQNRNIRCNETLFVALIQHYGKVHLVEKGIELFHRMPSFNCFRSR 169
           AR R FEAVE IL H+Q+RNIRC E +F+ L+QHYGK +LV+K IELF R+PSFNC R+ 
Sbjct: 94  ARFRDFEAVETILDHVQDRNIRCGEKVFIVLMQHYGKANLVDKAIELFRRIPSFNCVRTL 153

Query: 170 QSLNVLLNTLVDCDQFSKASEIFQQAYEMGFRPNSVTYNIMIKGWIKKGEWEQACNLFNE 229
           QSLN LLN LVD  +FS+A+++F ++Y+MGFRPNS+T+NI+IKG ++KG+WE+A  +F+E
Sbjct: 154 QSLNALLNVLVDGGRFSEANDVFYRSYKMGFRPNSITFNIIIKGCLRKGDWEEASKVFDE 213

Query: 230 MLEKRVQPSVVTYNSLLGLLCRNGEMDTALCLFENMIQKGNHPNAVTYALLMEGWCFIGK 289
           MLE+ VQPSVVTYNSL+G LC+ GE+D A  L E+MI+KG  PNAVTYAL+MEG C +GK
Sbjct: 214 MLERSVQPSVVTYNSLIGYLCKKGELDKAKGLLEDMIEKGKCPNAVTYALMMEGLCSVGK 273

Query: 290 YKEAKKLMFDMEFHGCKPRPVNYGVLMTHLGKTGNIDEVESLLNEMKKRRLKPDVVTYNI 349
           YKEAKKLMFDME+ GCKP+ VN+G+LMT LG+ GNI+E + LLNEMK+RR KPDVV YNI
Sbjct: 274 YKEAKKLMFDMEYRGCKPKLVNFGILMTDLGRRGNIEEAKLLLNEMKRRRFKPDVVIYNI 333

Query: 350 LVNYLCKEGRVEDAYKVLVKMQVGGCNPNAATYRMMIDGFCNAGDFDGAMKVLNSMLMSG 409
           L+NYLC+EG+   A+K+L +MQ+GGC PNAATYR+M+DGFC  GDF+  +KVLN+ML S 
Sbjct: 334 LINYLCREGKAVAAHKILTEMQIGGCEPNAATYRVMVDGFCQVGDFERGLKVLNAMLTSR 393

Query: 410 HCPRLQTFASLIVGLLRGENSNYVFFVLEEMEKRQMRFDAETWRTLVMDACGQD 463
           HCPRL++F  LI+GL++  N     FVLEEM KR+M+FD E W  LV++ACG++
Sbjct: 394 HCPRLESFRCLIMGLVKCGNLEDACFVLEEMGKRKMQFDLEGWDALVVEACGRN 447

[Close]

BLAST of CmoCh10G011480 vs. TAIR10
Match: AT1G07740.1 (AT1G07740.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 499.6 bits (1285), Expect = 2.2e-141
Identity = 247/452 (54.65%), Postives = 318/452 (70.35%), Query Frame = 1


Query: 30  VFHRNVCLIHFQLLSTHRPNK-----FDHVSPHKQHQKLREPIPFVTDVKEVKDPCEALA 89
           V   N C+   +   T RP K       H   HK  +K  E +PF+TD+KE++DP EAL+
Sbjct: 8   VLINNQCIASQRHYHTSRPEKPTKKASSHEPTHKFTRKPWEEVPFLTDLKEIEDPEEALS 67

Query: 90  LFKDYHERGFKHHYPSYSSLIYKLARSRRFEAVEMILGHLQNRNIRCNETLFVALIQHYG 149
           LF  Y E GF+H YPSYSSLIYKLA+SR F+AV+ IL  ++ RN+RC E+LF+ LIQHYG
Sbjct: 68  LFHQYQEMGFRHDYPSYSSLIYKLAKSRNFDAVDQILRLVRYRNVRCRESLFMGLIQHYG 127

Query: 150 KVHLVEKGIELFHRMPSFNCFRSRQSLNVLLNTLVDCDQFSKASEIFQQAYEMGFRPNSV 209
           K   V+K I++FH++ SF+C R+ QSLN L+N LVD  +  KA   F  A +M  RPNSV
Sbjct: 128 KAGSVDKAIDVFHKITSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDGAKDMRLRPNSV 187

Query: 210 TYNIMIKGWIKKGEWEQACNLFNEMLEKRVQPSVVTYNSLLGLLCRNGEMDTALCLFENM 269
           ++NI+IKG++ K +WE AC +F+EMLE  VQPSVVTYNSL+G LCRN +M  A  L E+M
Sbjct: 188 SFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAKSLLEDM 247

Query: 270 IQKGNHPNAVTYALLMEGWCFIGKYKEAKKLMFDMEFHGCKPRPVNYGVLMTHLGKTGNI 329
           I+K   PNAVT+ LLM+G C  G+Y EAKKLMFDME+ GCKP  VNYG+LM+ LGK G I
Sbjct: 248 IKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSDLGKRGRI 307

Query: 330 DEVESLLNEMKKRRLKPDVVTYNILVNYLCKEGRVEDAYKVLVKMQVGGCNPNAATYRMM 389
           DE + LL EMKKRR+KPDVV YNILVN+LC E RV +AY+VL +MQ+ GC PNAATYRMM
Sbjct: 308 DEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQMKGCKPNAATYRMM 367

Query: 390 IDGFCNAGDFDGAMKVLNSMLMSGHCPRLQTFASLIVGLLRGENSNYVFFVLEEMEKRQM 449
           IDGFC   DFD  + VLN+ML S HCP   TF  ++ GL++G N ++  FVLE M K+ +
Sbjct: 368 IDGFCRIEDFDSGLNVLNAMLASRHCPTPATFVCMVAGLIKGGNLDHACFVLEVMGKKNL 427

Query: 450 RFDAETWRTLVMDACGQDVVDIGSRINELISL 477
            F +  W+ L+ D C +D       ++E+IS+
Sbjct: 428 SFGSGAWQNLLSDLCIKDGGVYCEALSEVISI 459

[Close]

BLAST of CmoCh10G011480 vs. TAIR10
Match: AT5G16420.1 (AT5G16420.1 Pentatricopeptide repeat (PPR-like) superfamily protein)

HSP 1 Score: 217.6 bits (553), Expect = 1.6e-56
Identity = 133/462 (28.79%), Postives = 233/462 (50.43%), Query Frame = 1


Query: 14  IGPKQYLKLIKGSRLLVFHRNVCLIHFQLLSTHRPNKFDHVSPHKQHQKLREPIPFVTDV 73
           + P ++   +   RL  F  +      Q   T +P     + P  Q    +  +  +T  
Sbjct: 6   VNPTRFPPFVASRRL--FSASASAASLQQYCTEKPP----IKPWPQRLFPKRLVSMITQQ 65

Query: 74  KEVKDPCEALALFKDYHERGFKHHYPSYSSLIYKLARSRRFEAVEMILGHLQNRN--IRC 133
           + + D    + L+      GF H+Y +Y S+++KL+R+R F+ VE ++  L+N    I+C
Sbjct: 66  QNI-DLALQIFLYAGKSHPGFTHNYDTYHSILFKLSRARAFDPVESLMADLRNSYPPIKC 125

Query: 134 NETLFVALIQHYGKVHLVEKGIELFHRMPSFNCFRSRQSLNVLLNTLVDCDQFSKASEIF 193
            E LF+ L+++YG     E  + +F R+P F   RS +SLN LLN L+   +F     +F
Sbjct: 126 GENLFIDLLRNYGLAGRYESSMRIFLRIPDFGVKRSVRSLNTLLNVLIQNQRFDLVHAMF 185

Query: 194 QQAYE-MGFRPNSVTYNIMIKGWIKKGEWEQACNLFNEMLEKRVQPSVVTYNSLLGLLCR 253
           + + E  G  PN  T N+++K   KK + E A  + +E+    + P++VTY ++LG    
Sbjct: 186 KNSKESFGITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVA 245

Query: 254 NGEMDTALCLFENMIQKGNHPNAVTYALLMEGWCFIGKYKEAKKLMFDMEFHGCKPRPVN 313
            G+M++A  + E M+ +G +P+A TY +LM+G+C +G++ EA  +M DME +  +P  V 
Sbjct: 246 RGDMESAKRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVT 305

Query: 314 YGVLMTHLGKTGNIDEVESLLNEMKKRRLKPDVVTYNILVNYLCKEGRVEDAYKVLVKMQ 373
           YGV++  L K     E  ++ +EM +R   PD      +++ LC++ +V++A  +  KM 
Sbjct: 306 YGVMIRALCKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKML 365

Query: 374 VGGCNPNAATYRMMIDGFCNAGDFDGAMKVLNSMLMSGHCPRLQTFASLIVGLLRGENSN 433
              C P+ A    +I   C  G    A K+ +     G  P L T+ +LI G+       
Sbjct: 366 KNNCMPDNALLSTLIHWLCKEGRVTEARKLFDE-FEKGSIPSLLTYNTLIAGMCEKGELT 425

Query: 434 YVFFVLEEMEKRQMRFDAETWRTLVMDACGQDVVDIGSRINE 473
               + ++M +R+ + +A T+  L+        V  G R+ E
Sbjct: 426 EAGRLWDDMYERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLE 459

[Close]

BLAST of CmoCh10G011480 vs. TAIR10
Match: AT5G18475.1 (AT5G18475.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 194.9 bits (494), Expect = 1.1e-49
Identity = 124/409 (30.32%), Postives = 216/409 (52.81%), Query Frame = 1


Query: 70  VTDVKEVKDPCEALALF-KDYHERGFKHHYPSYSSLIYKLARSRRFEAVEMILGHLQNRN 129
           V+ +K  +DP   L +F K   ++GF H+  +YS L+  L R ++F AV+ IL  ++   
Sbjct: 60  VSLMKRERDPQGVLDIFNKASQQKGFNHNNATYSVLLDNLVRHKKFLAVDAILHQMKYET 119

Query: 130 IRCNETLFVALIQHYGKVHLVEKGIELFHRMPSFNCFRSRQSLNVL---LNTLVDCDQFS 189
            R  E+LF+ L++H+ +  L +K +E+F+ +      R + SLN +   LN L+D  + +
Sbjct: 120 CRFQESLFLNLMRHFSRSDLHDKVMEMFNLIQVIA--RVKPSLNAISTCLNLLIDSGEVN 179

Query: 190 KASEIFQQA-YEMGFRPNSVTYNIMIKGWIKKGEWEQACNLFNEMLEKRVQ-PSVVTYNS 249
            + ++   A + +G +PN+  +NI++K   K G+   A  +  EM    +  P+ +TY++
Sbjct: 180 LSRKLLLYAKHNLGLQPNTCIFNILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYST 239

Query: 250 LLGLLCRNGEMDTALCLFENMIQK-GNHPNAVTYALLMEGWCFIGKYKEAKKLMFDMEFH 309
           L+  L  +     A+ LFE+MI K G  P+ VT+ +++ G+C  G+ + AKK++  M+ +
Sbjct: 240 LMDCLFAHSRSKEAVELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKN 299

Query: 310 GCKPRPVNYGVLMTHLGKTGNIDEVESLLNEMKKRRLKPDVVTYNILVNYLCKEGRVEDA 369
           GC P   NY  LM    K G I E +   +E+KK  LK D V Y  L+N  C+ G  ++A
Sbjct: 300 GCNPNVYNYSALMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEA 359

Query: 370 YKVLVKMQVGGCNPNAATYRMMIDGFCNAGDFDGAMKVLNSMLMSGHCPRLQTFASLIVG 429
            K+L +M+   C  +  TY +++ G  + G  + A+++L+     G      ++  ++  
Sbjct: 360 MKLLGEMKASRCRADTLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRIILNA 419

Query: 430 L-LRGENSNYVFFVLEEMEKRQMRFDAETWRTLVMDACGQDVVDIGSRI 471
           L   GE    V F L  M +R +     TW  LV+  C     +IG R+
Sbjct: 420 LCCNGELEKAVKF-LSVMSERGIWPHHATWNELVVRLCESGYTEIGVRV 465

[Close]

BLAST of CmoCh10G011480 vs. TAIR10
Match: AT5G46100.1 (AT5G46100.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 187.6 bits (475), Expect = 1.8e-47
Identity = 113/404 (27.97%), Postives = 200/404 (49.50%), Query Frame = 1


Query: 66  PIPFVTDVKEVKDPCEALALFKDY---HERGFKHHYPSYSSLIYKLARSRRFEAVEMILG 125
           P   +  ++  KD  +++A+F      +  G+ H   S+  ++ +L  + +F+A E ++ 
Sbjct: 16  PSQVIKLMRAEKDVEKSMAVFDSATAEYANGYVHDQSSFGYMVLRLVSANKFKAAEDLIV 75

Query: 126 HLQNRNIRCNETLFVALIQHYGKVHLVEKGIELFHRMPSFNCFRSRQSLNVLLNTLVDCD 185
            ++  N   +E + +++ + YG+VH     + +FH+M  F+C  S+++   +L  LV+ +
Sbjct: 76  RMKIENCVVSEDILLSICRGYGRVHRPFDSLRVFHKMKDFDCDPSQKAYVTVLAILVEEN 135

Query: 186 QFSKASEIFQQAYEMGFRPNSVTYNIMIKGWIKK-GEWEQACNLFNEMLEKRVQPSVVTY 245
           Q + A + ++   E+G  P   + N++IK   +  G  +    +F EM ++   P   TY
Sbjct: 136 QLNLAFKFYKNMREIGLPPTVASLNVLIKALCRNDGTVDAGLKIFLEMPKRGCDPDSYTY 195

Query: 246 NSLLGLLCRNGEMDTALCLFENMIQKGNHPNAVTYALLMEGWCFIGKYKEAKKLMFDMEF 305
            +L+  LCR G +D A  LF  M++K   P  VTY  L+ G C      EA + + +M+ 
Sbjct: 196 GTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMKS 255

Query: 306 HGCKPRPVNYGVLMTHLGKTGNIDEVESLLNEMKKRRLKPDVVTYNILVNYLCKEGRVED 365
            G +P    Y  LM  L K G   +   L   M  R  +P++VTY  L+  LCKE ++++
Sbjct: 256 KGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQE 315

Query: 366 AYKVLVKMQVGGCNPNAATYRMMIDGFCNAGDFDGAMKVLNSMLMSGHCPRLQTF---AS 425
           A ++L +M + G  P+A  Y  +I GFC    F  A   L+ M++ G  P   T+     
Sbjct: 316 AVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFLDEMILGGITPNRLTWNIHVK 375

Query: 426 LIVGLLRGENSNY---VFFVLEEMEKRQMRFDAETWRTLVMDAC 460
               ++RG  +NY    F +   M  R +  + ET  +LV   C
Sbjct: 376 TSNEVVRGLCANYPSRAFTLYLSMRSRGISVEVETLESLVKCLC 419

[Close]

BLAST of CmoCh10G011480 vs. TAIR10
Match: AT1G53330.1 (AT1G53330.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 185.7 bits (470), Expect = 6.9e-47
Identity = 115/375 (30.67%), Postives = 193/375 (51.47%), Query Frame = 1


Query: 73  VKEVKDPCEALALFKDYH------ERGFKHHYPSYSSLIYKLARSRRFEAVEMILGHLQ- 132
           ++   DP  A+ LF++        +R F++    Y  +I KL  S+ F+ ++ +L HL+ 
Sbjct: 16  LRRENDPSAAMKLFRNPDPESTNPKRPFRYSLLCYDIIITKLGGSKMFDELDQVLLHLKT 75

Query: 133 NRNIRCNETLFVALIQHYGKVHLVEKGIELFHRMPSFNCFRSRQSLNVLLNTLVDCDQFS 192
           +  I   E +F  +I  +G+  L  + + +F  MP + C R+ +SLN LL+ L+ C +  
Sbjct: 76  DTRIVPTEIIFCNVINFFGRGKLPSRALHMFDEMPQYRCQRTVKSLNSLLSALLKCGELE 135

Query: 193 KASEIFQQAYEMGFRPNSVTYNIMIKGWIKKGEWEQACNLFNEMLEKRVQPSVVTYNSLL 252
           K  E      E G +P++ TYNI+I G  + G ++ A  LF+EM++K+V+P+ VT+ +L+
Sbjct: 136 KMKERLSSIDEFG-KPDACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTFGTLI 195

Query: 253 GLLCRNGEMDTALCLFENMIQK-GNHPNAVTYALLMEGWCFIGKYKEAKKLMFDMEFHGC 312
             LC++  +  AL +  +M++  G  P    YA L++  C IG+   A KL  +      
Sbjct: 196 HGLCKDSRVKEALKMKHDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEGKI 255

Query: 313 KPRPVNYGVLMTHLGKTGNIDEVESLLNEMKKRRLKPDVVTYNILVNYLCKEGRVEDAYK 372
           K     Y  L++ L K G  +EV  +L EM ++  KPD VTYN+L+N  C E   E A +
Sbjct: 256 KVDAAIYSTLISSLIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANR 315

Query: 373 VLVKMQVGGCNPNAATYRMMIDGFCNAGDFDGAMKVLNSMLMSGHCPRLQTFASLIVGLL 432
           VL +M   G  P+  +Y M++  F     ++ A  +   M   G  P   ++  +  GL 
Sbjct: 316 VLDEMVEKGLKPDVISYNMILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIVFDGLC 375

Query: 433 RGENSNYVFFVLEEM 440
            G        +L+EM
Sbjct: 376 EGLQFEEAAVILDEM 389

[Close]

BLAST of CmoCh10G011480 vs. NCBI nr
Match: gi|659099591|ref|XP_008450678.1| (PREDICTED: pentatricopeptide repeat-containing protein At1g07740, mitochondrial-like isoform X1 [Cucumis melo])

HSP 1 Score: 824.7 bits (2129), Expect = 8.3e-236
Identity = 397/457 (86.87%), Postives = 428/457 (93.65%), Query Frame = 1


Query: 21  KLIKGSRLLVFHRNVCLIHFQLLSTHRPNKFDHVSPHKQHQKLREPIPFVTDVKEVKDPC 80
           KLIK S LL+FHRNVCLIHFQLLST   NKFD  + HKQ +KLREPIPFVTDVKEVKDPC
Sbjct: 4   KLIKRSSLLIFHRNVCLIHFQLLSTFSTNKFDSENHHKQRRKLREPIPFVTDVKEVKDPC 63

Query: 81  EALALFKDYHERGFKHHYPSYSSLIYKLARSRRFEAVEMILGHLQNRNIRCNETLFVALI 140
           EALALF++YHE+GFKHHYPSYSSLIYKLARSRRFEAVE ILGHL+NRNIRCNETLFVALI
Sbjct: 64  EALALFENYHEKGFKHHYPSYSSLIYKLARSRRFEAVETILGHLRNRNIRCNETLFVALI 123

Query: 141 QHYGKVHLVEKGIELFHRMPSFNCFRSRQSLNVLLNTLVDCDQFSKASEIFQQAYEMGFR 200
           QHYGK HLVEKGIELFH+MPSFNCFR+ QS NVLLNTLVDCDQFSKASEIFQQAYEMGFR
Sbjct: 124 QHYGKAHLVEKGIELFHQMPSFNCFRTLQSFNVLLNTLVDCDQFSKASEIFQQAYEMGFR 183

Query: 201 PNSVTYNIMIKGWIKKGEWEQACNLFNEMLEKRVQPSVVTYNSLLGLLCRNGEMDTALCL 260
           PNSV+YNIMIKGWIKKG WEQACNLF+EMLEK VQPSVVTYNS LG+LCR GEMDTALCL
Sbjct: 184 PNSVSYNIMIKGWIKKGGWEQACNLFDEMLEKGVQPSVVTYNSFLGVLCRKGEMDTALCL 243

Query: 261 FENMIQKGNHPNAVTYALLMEGWCFIGKYKEAKKLMFDMEFHGCKPRPVNYGVLMTHLGK 320
           F+NM +KG+HPNAVTYALLMEGWCFIGKYKEAKKLMFDMEFHGCK RPVNYGVLMT+LGK
Sbjct: 244 FKNMTEKGHHPNAVTYALLMEGWCFIGKYKEAKKLMFDMEFHGCKLRPVNYGVLMTYLGK 303

Query: 321 TGNIDEVESLLNEMKKRRLKPDVVTYNILVNYLCKEGRVEDAYKVLVKMQVGGCNPNAAT 380
            GNIDE+ESLLNEMKKRRLKPDVVTYNILVNYLCKEGRV DAYKVLVKMQVGGC+PNAAT
Sbjct: 304 AGNIDEMESLLNEMKKRRLKPDVVTYNILVNYLCKEGRVGDAYKVLVKMQVGGCDPNAAT 363

Query: 381 YRMMIDGFCNAGDFDGAMKVLNSMLMSGHCPRLQTFASLIVGLLRGENS-NYVFFVLEEM 440
           YRMMIDG+CNAGDFDGAMK+LN+MLMSGHCP L+TFA L+VGLL+GEN+ +YV FVLEEM
Sbjct: 364 YRMMIDGYCNAGDFDGAMKILNAMLMSGHCPHLKTFAFLVVGLLKGENNDDYVCFVLEEM 423

Query: 441 EKRQMRFDAETWRTLVMDACGQDVVDIGSRINELISL 477
           EKRQ+RFDAETWRTL+MD CGQ  V+IGS +N+LISL
Sbjct: 424 EKRQLRFDAETWRTLIMDVCGQH-VEIGSHLNDLISL 459

[Close]

BLAST of CmoCh10G011480 vs. NCBI nr
Match: gi|778662550|ref|XP_011659903.1| (PREDICTED: pentatricopeptide repeat-containing protein At1g07740, mitochondrial isoform X1 [Cucumis sativus])

HSP 1 Score: 818.9 bits (2114), Expect = 4.6e-234
Identity = 395/457 (86.43%), Postives = 427/457 (93.44%), Query Frame = 1


Query: 21  KLIKGSRLLVFHRNVCLIHFQLLSTHRPNKFDHVSPHKQHQKLREPIPFVTDVKEVKDPC 80
           KLIK SRLL+FHRNVCLI FQLLST  PNKFD  + HKQ +K+RE IPFVTDVKEVKDPC
Sbjct: 4   KLIKRSRLLIFHRNVCLIRFQLLSTFSPNKFDFENNHKQRRKIRERIPFVTDVKEVKDPC 63

Query: 81  EALALFKDYHERGFKHHYPSYSSLIYKLARSRRFEAVEMILGHLQNRNIRCNETLFVALI 140
           EALALF++YHE+GFKHHYPSYSSLIYKLARSRRFEAVE ILGHL+NRNIRCNETLFVALI
Sbjct: 64  EALALFENYHEKGFKHHYPSYSSLIYKLARSRRFEAVETILGHLRNRNIRCNETLFVALI 123

Query: 141 QHYGKVHLVEKGIELFHRMPSFNCFRSRQSLNVLLNTLVDCDQFSKASEIFQQAYEMGFR 200
           QHYGK HLVEKGIELFH+MPSFNCFR+ QS NVLLNTLVDCDQFSKASEIFQQAYEM FR
Sbjct: 124 QHYGKAHLVEKGIELFHQMPSFNCFRTLQSFNVLLNTLVDCDQFSKASEIFQQAYEMDFR 183

Query: 201 PNSVTYNIMIKGWIKKGEWEQACNLFNEMLEKRVQPSVVTYNSLLGLLCRNGEMDTALCL 260
           PNSV+YNIMIKGWIKKG WEQACNLF+EMLEK VQPSVVTYNS LG+LCR GEMDTALCL
Sbjct: 184 PNSVSYNIMIKGWIKKGGWEQACNLFDEMLEKGVQPSVVTYNSFLGVLCRKGEMDTALCL 243

Query: 261 FENMIQKGNHPNAVTYALLMEGWCFIGKYKEAKKLMFDMEFHGCKPRPVNYGVLMTHLGK 320
           F+NM +KG+HPNAVTYALLMEGWCFIGKYKEAKKLMFDMEFHGCK RPVNYGVLMTHLGK
Sbjct: 244 FKNMTEKGHHPNAVTYALLMEGWCFIGKYKEAKKLMFDMEFHGCKLRPVNYGVLMTHLGK 303

Query: 321 TGNIDEVESLLNEMKKRRLKPDVVTYNILVNYLCKEGRVEDAYKVLVKMQVGGCNPNAAT 380
           TGNIDE+ESLLNEMKKRRLKPDVVTYNILVNYLCKEG+V DAYKVLVKMQVGGC+PNAAT
Sbjct: 304 TGNIDEMESLLNEMKKRRLKPDVVTYNILVNYLCKEGKVGDAYKVLVKMQVGGCDPNAAT 363

Query: 381 YRMMIDGFCNAGDFDGAMKVLNSMLMSGHCPRLQTFASLIVGLLRGENS-NYVFFVLEEM 440
           YRMMIDG+CNAGDFDGAMK+LN+MLMSGH P L+TFASL+VGLL+GEN+ +YV FVLEEM
Sbjct: 364 YRMMIDGYCNAGDFDGAMKILNAMLMSGHYPHLKTFASLVVGLLKGENNDDYVCFVLEEM 423

Query: 441 EKRQMRFDAETWRTLVMDACGQDVVDIGSRINELISL 477
           EKRQ+RFDAETWR L+MD CGQ  V+IGS +N+LISL
Sbjct: 424 EKRQLRFDAETWRILIMDVCGQH-VEIGSHLNDLISL 459

[Close]

BLAST of CmoCh10G011480 vs. NCBI nr
Match: gi|595844137|ref|XP_007208752.1| (hypothetical protein PRUPE_ppa015993mg [Prunus persica])

HSP 1 Score: 574.7 bits (1480), Expect = 1.5e-160
Identity = 278/436 (63.76%), Postives = 344/436 (78.90%), Query Frame = 1


Query: 45  THRPNKFDHVSP-----HKQHQKLREPIPFVTDVKEVKDPCEALALFKDYHERGFKHHYP 104
           T RPNK     P     H+   KLR PIPFV+DVKEV+DP E L+LF +YH+ GFKH YP
Sbjct: 32  TFRPNK-PKTKPRRERLHRDTTKLRRPIPFVSDVKEVEDPEEGLSLFYEYHQMGFKHDYP 91

Query: 105 SYSSLIYKLARSRRFEAVEMILGHLQNRNIRCNETLFVALIQHYGKVHLVEKGIELFHRM 164
           SYS+L+YKLARSR FEAVE ILGH+++RNI C +TLF+ALIQHYGK +LVEK IELF++M
Sbjct: 92  SYSALLYKLARSRNFEAVETILGHVRDRNIHCKDTLFIALIQHYGKANLVEKAIELFNQM 151

Query: 165 PSFNCFRSRQSLNVLLNTLVDCDQFSKASEIFQQAYEMGFRPNSVTYNIMIKGWIKKGEW 224
           PSFNC R+ Q+ N LLN LVD  +F +A EIF +  +MG RPNS++YNIM+KGW++KG+ 
Sbjct: 152 PSFNCVRTLQAFNALLNVLVDSGRFVEADEIFGRCSKMGLRPNSISYNIMMKGWLQKGDG 211

Query: 225 EQACNLFNEMLEKRVQPSVVTYNSLLGLLCRNGEMDTALCLFENMIQKGNHPNAVTYALL 284
           E+AC +F+EMLEK+VQPSVVTYNSL+G   R GE++ A  L E+M QKG +PNAVTYALL
Sbjct: 212 EEACKVFDEMLEKKVQPSVVTYNSLIGFFGRKGELEKANGLLEDMKQKGKYPNAVTYALL 271

Query: 285 MEGWCFIGKYKEAKKLMFDMEFHGCKPRPVNYGVLMTHLGKTGNIDEVESLLNEMKKRRL 344
           MEG+C +GK++EAKK+MFDME+ GCKPR +NYGVLM+ LG+ G IDE +SLL EMKKRR 
Sbjct: 272 MEGFCMLGKHEEAKKMMFDMEYRGCKPRLLNYGVLMSDLGRRGKIDEAKSLLQEMKKRRF 331

Query: 345 KPDVVTYNILVNYLCKEGRVEDAYKVLVKMQVGGCNPNAATYRMMIDGFCNAGDFDGAMK 404
           KPDVV YNIL+N+LCKEGR  +AYKVL++MQVGGC PNAATYRMM+DGFC   DF+G +K
Sbjct: 332 KPDVVLYNILINFLCKEGRAAEAYKVLIEMQVGGCVPNAATYRMMVDGFCQIEDFEGGLK 391

Query: 405 VLNSMLMSGHCPRLQTFASLIVGLLRGENSNYVFFVLEEMEKRQMRFDAETWRTLVMDAC 464
           VL +ML S HCPRL+TF  L+ GL++    +  F VLEEMEKR M+F  E W  LV+DAC
Sbjct: 392 VLIAMLTSRHCPRLETFECLVTGLVKCGKIDDAFVVLEEMEKRNMQFCFEAWEALVVDAC 451

Query: 465 GQDVVDIGSRINELIS 476
           G++VV  G  + ELIS
Sbjct: 452 GENVV-AGEVVTELIS 465

[Close]

BLAST of CmoCh10G011480 vs. NCBI nr
Match: gi|694354013|ref|XP_009358310.1| (PREDICTED: pentatricopeptide repeat-containing protein At1g07740, mitochondrial [Pyrus x bretschneideri])

HSP 1 Score: 566.2 bits (1458), Expect = 5.3e-158
Identity = 266/408 (65.20%), Postives = 323/408 (79.17%), Query Frame = 1


Query: 57  HKQHQKLREPIPFVTDVKEVKDPCEALALFKDYHERGFKHHYPSYSSLIYKLARSRRFEA 116
           H+   KLR PIPFV+DVK  +DP EAL+LF +YH+ GFKH YPSYS+L+YKLAR R FEA
Sbjct: 47  HRNTAKLRRPIPFVSDVKATQDPEEALSLFHEYHQMGFKHDYPSYSALLYKLARRRNFEA 106

Query: 117 VEMILGHLQNRNIRCNETLFVALIQHYGKVHLVEKGIELFHRMPSFNCFRSRQSLNVLLN 176
           V+ +LG +++RNI C +TLF+ALIQHYGK  LVEK ++LFH+MPSFNC R+ Q  N LLN
Sbjct: 107 VDAVLGLVRDRNIHCKDTLFIALIQHYGKADLVEKAVDLFHQMPSFNCVRTLQCFNELLN 166

Query: 177 TLVDCDQFSKASEIFQQAYEMGFRPNSVTYNIMIKGWIKKGEWEQACNLFNEMLEKRVQP 236
            LVD  +FS A EIF +   +GFRPNS++YNIMIKGW++KG+WE+A  +F+EMLEK+VQP
Sbjct: 167 VLVDGGRFSDADEIFGRCSTLGFRPNSISYNIMIKGWLQKGDWEEAWKVFDEMLEKKVQP 226

Query: 237 SVVTYNSLLGLLCRNGEMDTALCLFENMIQKGNHPNAVTYALLMEGWCFIGKYKEAKKLM 296
           SVVTYNSL+G   R GE++ A  LFE+M QKG +PNAVTYALLMEG C  GK+ EAKK+M
Sbjct: 227 SVVTYNSLIGFFGRRGELEKATGLFEDMRQKGKYPNAVTYALLMEGLCLAGKHDEAKKMM 286

Query: 297 FDMEFHGCKPRPVNYGVLMTHLGKTGNIDEVESLLNEMKKRRLKPDVVTYNILVNYLCKE 356
           FDME+ GCKPR VNYGVLM+ LGK G I+E +S L EMKKRR KP+VV YNIL+N+LCKE
Sbjct: 287 FDMEYQGCKPRLVNYGVLMSDLGKRGKIEEAKSFLQEMKKRRFKPNVVIYNILINFLCKE 346

Query: 357 GRVEDAYKVLVKMQVGGCNPNAATYRMMIDGFCNAGDFDGAMKVLNSMLMSGHCPRLQTF 416
           GR  +AYKVLV+MQVGGC PNAATYRMM+DGFC   DF+G  KVL +ML S HCPRL+TF
Sbjct: 347 GRAAEAYKVLVEMQVGGCEPNAATYRMMVDGFCQIEDFEGGFKVLTAMLASRHCPRLETF 406

Query: 417 ASLIVGLLRGENSNYVFFVLEEMEKRQMRFDAETWRTLVMDACGQDVV 465
             L+ GLL+    N   FVLEEMEKR M+F  E W  LV+DACG+D+V
Sbjct: 407 ECLVTGLLKCGKINDACFVLEEMEKRNMQFHLEAWEALVVDACGEDIV 454

[Close]

BLAST of CmoCh10G011480 vs. NCBI nr
Match: gi|568870090|ref|XP_006488245.1| (PREDICTED: pentatricopeptide repeat-containing protein At1g07740, mitochondrial [Citrus sinensis])

HSP 1 Score: 562.8 bits (1449), Expect = 5.9e-157
Identity = 272/468 (58.12%), Postives = 352/468 (75.21%), Query Frame = 1


Query: 21  KLIKGSRLLVFHRNVCLIHFQLLSTH-------------RPNKFDHVSPHKQHQKLREPI 80
           K I  ++L++ H+  C+ +      H             +P +  +   HK  +K +EPI
Sbjct: 9   KFINQTKLVLLHQRQCINYIPSQQKHTFTPKKPKPKPSTKPRRKQNPQNHKTIRKTKEPI 68

Query: 81  PFVTDVKEVKDPCEALALFKDYHERGFKHHYPSYSSLIYKLARSRRFEAVEMILGHLQNR 140
           PFV D+KE++DP EAL+LF  +H+ G KH YPSY+SLIYKLAR+R F+AVE +LG++Q+ 
Sbjct: 69  PFVNDLKEIRDPDEALSLFHRHHQMGSKHSYPSYASLIYKLARARDFDAVETVLGYIQDF 128

Query: 141 NIRCNETLFVALIQHYGKVHLVEKGIELFHRMPSFNCFRSRQSLNVLLNTLVDCDQFSKA 200
           NIRC ETLF++LIQHYGK HLV+K IE+F+RM SF+C R+ QS N LL+ LVD D+   A
Sbjct: 129 NIRCKETLFISLIQHYGKAHLVDKAIEVFNRMTSFDCVRTLQSFNSLLDILVDNDRVDDA 188

Query: 201 SEIFQQAYEMGFRPNSVTYNIMIKGWIKKGEWEQACNLFNEMLEKRVQPSVVTYNSLLGL 260
             +F  AY+MGFRPN +++N+MIKG +KKGEWE+A  +F+EMLE+ V P+VVTYNSL+G 
Sbjct: 189 KRMFDDAYKMGFRPNLISFNVMIKGRLKKGEWEEASRVFDEMLEREVPPTVVTYNSLVGF 248

Query: 261 LCRNGEMDTALCLFENMIQKGNHPNAVTYALLMEGWCFIGKYKEAKKLMFDMEFHGCKPR 320
           LCR GEM+ A  LFE+MI+KG +PNAVTYALLMEG CF G+Y EAKK+MFDM + GCKP+
Sbjct: 249 LCRKGEMEKAKGLFEDMIKKGTYPNAVTYALLMEGLCFKGEYNEAKKMMFDMAYRGCKPQ 308

Query: 321 PVNYGVLMTHLGKTGNIDEVESLLNEMKKRRLKPDVVTYNILVNYLCKEGRVEDAYKVLV 380
            VN+GVLM+ LGK G I+E +SLL+EMKKR+ KPDVVTYNIL+NYLCKE R  +AYKVL 
Sbjct: 309 LVNFGVLMSDLGKRGKIEEAKSLLSEMKKRQYKPDVVTYNILINYLCKEDRAAEAYKVLT 368

Query: 381 KMQVGGCNPNAATYRMMIDGFCNAGDFDGAMKVLNSMLMSGHCPRLQTFASLIVGLLRGE 440
           +MQ+GGC PNAATYR M+DGF    DF+G++KVLN+ML S HCPRL+TF+ L+VGLL+G 
Sbjct: 369 EMQIGGCKPNAATYRTMVDGFLRVEDFEGSLKVLNAMLTSRHCPRLETFSCLLVGLLKGG 428

Query: 441 NSNYVFFVLEEMEKRQMRFDAETWRTLVMDACGQDVVDIGSRINELIS 476
             +   FVLEEMEKR+MRFD + W  LV DAC  D  + G  ++ELIS
Sbjct: 429 KVDDACFVLEEMEKRKMRFDLKAWEGLVTDACIGD-GNAGGLVSELIS 475

The following BLAST results are available for this feature:

BLAST of CmoCh10G011480 vs. Swiss-Prot


Match Name	E-value	Identity	Description
PPR20_ARATH	3.8e-140	54.65	Pentatricopeptide repeat-containing protein At1g07740, mitochondrial OS=Arabidop...	[more]
PP388_ARATH	2.9e-55	28.79	Pentatricopeptide repeat-containing protein At5g16420, mitochondrial OS=Arabidop...	[more]
PP392_ARATH	2.0e-48	30.32	Pentatricopeptide repeat-containing protein At5g18475 OS=Arabidopsis thaliana GN...	[more]
PP418_ARATH	3.2e-46	27.97	Pentatricopeptide repeat-containing protein At5g46100 OS=Arabidopsis thaliana GN...	[more]
PPR79_ARATH	1.2e-45	30.67	Putative pentatricopeptide repeat-containing protein At1g53330 OS=Arabidopsis th...	[more]

BLAST of CmoCh10G011480 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0M1K9_CUCSA	3.2e-234	86.43	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G570750 PE=4 SV=1	[more]
M5W9F4_PRUPE	1.0e-160	63.76	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa015993mg PE=4 SV=1	[more]
V4UF73_9ROSI	1.3e-155	58.85	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10030177mg PE=4 SV=1	[more]
A0A061GWH8_THECC	1.7e-155	59.44	Tetratricopeptide repeat-like superfamily protein OS=Theobroma cacao GN=TCM_0419...	[more]
W9SCB5_9ROSA	2.5e-154	62.56	Uncharacterized protein OS=Morus notabilis GN=L484_010855 PE=4 SV=1	[more]

BLAST of CmoCh10G011480 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G07740.1	2.2e-141	54.65	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT5G16420.1	1.6e-56	28.79	Pentatricopeptide repeat (PPR-like) superfamily protein	[more]
AT5G18475.1	1.1e-49	30.32	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT5G46100.1	1.8e-47	27.97	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT1G53330.1	6.9e-47	30.67	Pentatricopeptide repeat (PPR) superfamily protein	[more]

BLAST of CmoCh10G011480 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659099591\|ref\|XP_008450678.1\|	8.3e-236	86.87	PREDICTED: pentatricopeptide repeat-containing protein At1g07740, mitochondrial-...	[more]
gi\|778662550\|ref\|XP_011659903.1\|	4.6e-234	86.43	PREDICTED: pentatricopeptide repeat-containing protein At1g07740, mitochondrial ...	[more]
gi\|595844137\|ref\|XP_007208752.1\|	1.5e-160	63.76	hypothetical protein PRUPE_ppa015993mg [Prunus persica]	[more]
gi\|694354013\|ref\|XP_009358310.1\|	5.3e-158	65.20	PREDICTED: pentatricopeptide repeat-containing protein At1g07740, mitochondrial ...	[more]
gi\|568870090\|ref\|XP_006488245.1\|	5.9e-157	58.12	PREDICTED: pentatricopeptide repeat-containing protein At1g07740, mitochondrial ...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR002885	Pentatricopeptide_repeat
IPR011990	TPR-like_helical_dom_sf

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0044710	single-organism metabolic process
biological_process	GO:0006281	DNA repair
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0008094	DNA-dependent ATPase activity
molecular_function	GO:0005515	protein binding
molecular_function	GO:0003824	catalytic activity
molecular_function	GO:0043167	ion binding
molecular_function	GO:0000166	nucleotide binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh10G011480.1	CmoCh10G011480.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 136..164 score: 0
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 201..245 score: 3.8E-17coord: 341..390 score: 4.0E-19coord: 271..315 score: 1.
IPR002885	Pentatricopeptide repeat	TIGRFAMs	TIGR00756	TIGR00756	coord: 311..343 score: 7.7E-7coord: 344..378 score: 4.0E-10coord: 204..237 score: 2.5E-9coord: 380..411 score: 8.4E-9coord: 239..273 score: 1.
IPR002885	Pentatricopeptide repeat	PROFILE	PS51375	PPR	coord: 202..236 score: 13.318coord: 412..446 score: 6.281coord: 167..201 score: 8.846coord: 377..411 score: 12.233coord: 272..306 score: 10.961coord: 237..271 score: 12.518coord: 132..166 score: 7.969coord: 307..341 score: 10.391coord: 342..376 score: 13.044coord: 97..131 score: 6
IPR011990	Tetratricopeptide-like helical domain	GENE3D	G3DSA:1.25.40.10		coord: 175..368 score: 4.4
None	No IPR available	PANTHER	PTHR24015	FAMILY NOT NAMED	coord: 63..474 score: 1.4E
None	No IPR available	PANTHER	PTHR24015:SF734	SUBFAMILY NOT NAMED	coord: 63..474 score: 1.4E
None	No IPR available	unknown	SSF81901	HCP-like	coord: 81..295 score: 6.2

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh10G011480	CmaCh10G010670	Cucurbita maxima (Rimu)	cmacmoB067
CmoCh10G011480	Cla005254	Watermelon (97103) v1	cmowmB040
CmoCh10G011480	Csa1G570750	Cucumber (Chinese Long) v2	cmocuB055
CmoCh10G011480	ClCG03G016800	Watermelon (Charleston Gray)	cmowcgB047
CmoCh10G011480	CSPI01G26830	Wild cucumber (PI 183967)	cmocpiB058
CmoCh10G011480	Lsi06G001520	Bottle gourd (USVL1VR-Ls)	cmolsiB065
CmoCh10G011480	MELO3C029300.2	Melon (DHL92) v3.6.1	cmomedB065
CmoCh10G011480	CsaV3_1G039170	Cucumber (Chinese Long) v3	cmocucB0062
CmoCh10G011480	Cla97C03G067140	Watermelon (97103) v2	cmowmbB048
CmoCh10G011480	Bhi02G001666	Wax gourd	cmowgoB0077

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh10G011480	Cucurbita maxima (Rimu)	cmacmoB102
CmoCh10G011480	Melon (DHL92) v3.5.1	cmomeB062
CmoCh10G011480	Cucurbita pepo (Zucchini)	cmocpeB051
CmoCh10G011480	Cucurbita pepo (Zucchini)	cmocpeB056
CmoCh10G011480	Cucumber (Gy14) v2	cgybcmoB023