CmoCh09G013350 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh09G013350
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Domain of unknown function (DUF543)
Location	Cmo_Chr09 : 12104043 .. 12107684 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTTCGAATGAGAAGTTGTGCTTCCGATCTTGTTCTCTGCTCTGGGTTTGGTCCTTTAGGTGAGGCCCTTGACTTTACAGGGTGGTTCCCTTTATGGTTCAGGAATTCGTGGTTGACTGACTTTTCTTTGTTTGGCATTCTTTAGTCTTGAGCTTGCTCCTTGCTCAAGAATGAATGTTGTAAACTCTTCGATGACATGCTCCTTTGAGTGCACAATTATTCCTTAGCTATGCGTGTTTCGTACCGAGCTCTTTGAGGGTCTTTCTTTATCCATTCACGCTAAAAGGTAGTGAGTGGAGTCAGGCACAAAACGATCCTCAGCTGCTGAAATAAGCCCTGTTCAATCTCCTGTTGAAGTGGTGACTCACCTGCAACATCAGTTTATATATATCTTATTCGTACCTAGATGCTTTATTTCTAGGTCATAGACTCACTTAGGCTATCTCTTAGGTCAGCTAGAATCATTTGAACTTAACTTAGTCTTAGTTTAAAAATCTTCCAAATTTTCATCTTTTAGCACTGTCAAGACACTTTTGGGTTCATTGACTCTCAGAGCTTATTATCTCATAAGACTTATCTTAGAGTTTTAAGGTATCTTGATTAGGAATTAGTCTATTTCATCATCAACCTTAGTATCATAGGTGCTCGAGATGCAACCTTGTCCTTGTTCCAACTCATGATTCTCATCGTATTGCCATGGACATTGTCGATCGAGAAAACTTTTCTATCATCAAGGAGAGGACGACCCTCATGCCATCTGGTCACTTTCTCTCATATGAACAAGATCCCGATTTAGGAATAGTTGGAGGTTTCCTAGTTCACCACACACAATACTCGTATGGCCTTGAAAGTTCACTCATGTCAGCGCCCAACCCTATCAATACATGCTCATATAGGTACTAATGCAGACTTTTGCTATTTGGAATAGGTTCACTACTAGAAGTTAACTCGCAAGCCACTTAATAGTTCCCACACAGTACAAGTCGTCATAGCGAGCTACTGAAAATACTAATAAATCCCCAACAATTGAGTCACGTTCACAATTTGAAGTTAGTTGGCGAACCCTTAATCATCTCCGTGCCATTCACATATCATGTATGGTTCACATCATCAATTGGGACATAGTAATGTAAACTAATCATAGATGCTGATATGAAAACGTTATTTAATTGGATCTAAGGACTCTTACGAATATGCAAATCCCTAGATCCCAACTGTTTAAATTCACAAATCAAGATGATTTCGTTCTAAATGATATGGAACTCTCGGGAATTCAATCTAATAGCTTCATTGAAGAACAAGACCTTTAGATCTAAAATACCTAAGAACCTCGAAACGATAAGAAATCAAACCAATGGAAAGTAAGATTTGGATTAGCTTATTGATCAAATATCTCCTGCCAAGAAAACGTACAGCCTAAACTACAAAGAATTGTAAAAAAAAAAACTTTACCTCTAGGCTAAAAGAAAACACAAACTTGTTTTTTTACGACATTTTTAGAGTTTATTTTACAAAAACAATACACAAGGCTTTATATAGCCTCAAAATGAAACTCTTAACGTTCTCTGATACATTTCAAGAGTTGTAACGTTCATAATTTATGATCATAATTAACGATTATGTAAAATCTTGAAACCCAATTGTTCTTTGAATAAACGACTGGATTTTGATCTGATACTTCATTCCTATCTGTTTCGTGGATTTAAGCGGTGGCGATGCCTTTCCCACTGCTTATTGGTGGGTTCGAATATGACACAGGAGTTGTTGACTTCATTCAGGTGGAAACTAAGTGGAGGTCTGAACCGACTGACGTTGAAGAATTAGCGGATGAGTTGTGGTTAGAGGTATCATCCCACCCAGAACCTGACCATGCACTAAAATAGGATGACCTAACAATAAGGTTAGGTCAGACTTTTCCTTCGTTTCACTCTTCAATGTGGCGTGGCATAAAACCCAATAAGAAAAGAAAGGTTTTTGGGTCTGAGGATTTTGGTGTTCGGTGCTCCCTTCGAACTGATATCCACAGATTCCCTGTAACACAAGATGGTTTGAAATGATAGTTTATTATAGGTTCTGATGACATGAATAGGATGAGCATACGAATGAGTCGGAACATCGTTCAAGCCAGTCGGGAGTACAAGATTACTGACCGAAGACTAATCAATTGAGATGGGCGGAAGCCTTGCTATCGAAGAAATGCATCCAACAGTGTTCTGTCTCATGGGTCCTCATTCAAACTTAGAGCTAGCTGGTTCTCCGGAAATGAAAAATACCCTAATAAAGTTTCAATCACTTGAATCCATTGTTATGAACTTTGATTCTTGTTTAATGGGTATTAATTTGATGATGTGGTATATTTATGTGTGAGAAAATTTGATGATTTAAGAAAAGATATTGGATGATGAGAACGAATGTGATAGGGGCAGGCCGAGAAAGGGGTGAGAAGTCCATTTTATAGTGATTCTAATATCAATGGCCCAAATTGAAAGGGGGCCGGGCTGAGCCTGCTGAGCCAAGGAATCGAAGCGAAGCACAACAATGAATCGAAGGAAACCCTCATAATACGGCCATTCCCACACAGCCAGAAGAATTGCAGGAAAACTAGACGAGGAGGAAGAAGAAGAAGAAGAACAGGGGGAGGATAGCAATCAACTTTATCGCTTCATAGCGTCCGACGGTTCCTTTCTGGATATGGCTGAGAACAAAGATGTCGTGCCTCCACCGCATGATTTGAATGCGAAGTGGGACGCTTGTCTTGATTTGACGCTGCGCCGATTCGTTTACTCTTCCTTGGCTGGTGCATTTGGCGGCCTCCTTTTCTTCAGTAATAATAATTCCTCCTCTCCCTTTTTCTCTGTTCTTATTTCCGTCTTATTATGTTTTTCTAATCTTCATCTGGCGGATGGGAAACATTGGAGTTTTAATTCATTTGAAGTAATTTTCTCTGGCCGTTCTTTACTAAAAACTGGAATTGCATGTCATTTCATTGGATCAACCATATGTTAAGATTTTTCCGTCATCGATTTGGACTGTCTGATATCTGCAAATGAAAGAGATGTAACGATTTTATTCTGCGACGAATCTGTAGACTCGAGAAATTGGGGTTCGCGTGAAATGGGTAATCACAAATGTCTTGAACTTTTGTCTTTCTACACTACTCGTGTAACCATTTCTCAGTATTGGGAACAGATAGCATGGATGCTAGCAGAAGTATCGGACTGTACTTTCAGTTTGTATCATTATAAGGCTCATTGCATCCTAGAATATCAGGATTTCCTAGATTCGTGTAAAACAAACTCGTGAATTTGAAGCCACTTCATGGACATCCAAGATTTTTGCAAAATAAATGGCCTCTCGCGTTGTTGATATACCGATGTTTTATCATTTTTCTGGAACCTCAGTTGTATGATTTTAACAAACTTACTAATGAGCACTGTATCTTGATTAACAACTAGGGAGTCCGGTGACTCGTTGGGCATCTATAGCTTTTGGTGCTGGATTGGGCATTGGATCAGCGTACACAGATTGTAATTCTTTATTTGAAGGTTCCACCGCAAAATTCGCATCTCCAAAACTCACTGGGCCTCAGACTTCACAGGTGAAATTCACATTTTCTTTCATTATAAAATCATCACCTTGA

mRNA sequence

ATGCTTCGAATGAGAAGTTGTGCTTCCGATCTTGTTCTCTGCTCTGGGTTTGGTCCTTTAGCCAGAAGAATTGCAGGAAAACTAGACGAGGAGGAAGAAGAAGAAGAAGAACAGGGGGAGGATAGCAATCAACTTTATCGCTTCATAGCGTCCGACGGTTCCTTTCTGGATATGGCTGAGAACAAAGATGTCGTGCCTCCACCGCATGATTTGAATGCGAAGTGGGACGCTTGTCTTGATTTGACGCTGCGCCGATTCGTTTACTCTTCCTTGGCTGGTGCATTTGGCGGCCTCCTTTTCTTCAGGAGTCCGGTGACTCGTTGGGCATCTATAGCTTTTGGTGCTGGATTGGGCATTGGATCAGCGTACACAGATTGTAATTCTTTATTTGAAGGTTCCACCGCAAAATTCGCATCTCCAAAACTCACTGGGCCTCAGACTTCACAGGTGAAATTCACATTTTCTTTCATTATAAAATCATCACCTTGA

Coding sequence (CDS)

ATGCTTCGAATGAGAAGTTGTGCTTCCGATCTTGTTCTCTGCTCTGGGTTTGGTCCTTTAGCCAGAAGAATTGCAGGAAAACTAGACGAGGAGGAAGAAGAAGAAGAAGAACAGGGGGAGGATAGCAATCAACTTTATCGCTTCATAGCGTCCGACGGTTCCTTTCTGGATATGGCTGAGAACAAAGATGTCGTGCCTCCACCGCATGATTTGAATGCGAAGTGGGACGCTTGTCTTGATTTGACGCTGCGCCGATTCGTTTACTCTTCCTTGGCTGGTGCATTTGGCGGCCTCCTTTTCTTCAGGAGTCCGGTGACTCGTTGGGCATCTATAGCTTTTGGTGCTGGATTGGGCATTGGATCAGCGTACACAGATTGTAATTCTTTATTTGAAGGTTCCACCGCAAAATTCGCATCTCCAAAACTCACTGGGCCTCAGACTTCACAGGTGAAATTCACATTTTCTTTCATTATAAAATCATCACCTTGA

Homology

[Close]

BLAST of CmoCh09G013350 vs. TrEMBL
Match: A0A0A0KUY2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G652290 PE=4 SV=1)

HSP 1 Score: 176.4 bits (446), Expect = 2.8e-41
Identity = 85/93 (91.40%), Postives = 87/93 (93.55%), Query Frame = 1


Query: 58  MAENKDVVPPPHDLNAKWDACLDLTLRRFVYSSLAGAFGGLLFFRSPVTRWASIAFGAGL 117
           MAENK VVPPPHDL+AKWDACLDLTLRRFVYSS AGAFGGLLFFRSPVTRWASIAFGAGL
Sbjct: 1   MAENKGVVPPPHDLSAKWDACLDLTLRRFVYSSFAGAFGGLLFFRSPVTRWASIAFGAGL 60

Query: 118 GIGSAYTDCNSLFEGSTAKFASPKLTGPQTSQV 151
           GIGSAYTDCNSLFEGSTAKF SPK+T  Q SQV
Sbjct: 61  GIGSAYTDCNSLFEGSTAKFTSPKITEAQPSQV 93

[Close]

BLAST of CmoCh09G013350 vs. TrEMBL
Match: A0A061FS50_THECC (Domain of Uncharacterized protein function OS=Theobroma cacao GN=TCM_036507 PE=4 SV=1)

HSP 1 Score: 147.5 bits (371), Expect = 1.4e-32
Identity = 67/93 (72.04%), Postives = 81/93 (87.10%), Query Frame = 1


Query: 58  MAENKDVVPPPHDLNAKWDACLDLTLRRFVYSSLAGAFGGLLFFRSPVTRWASIAFGAGL 117
           MAE+KD++P  +D+NAKWDACLDLT+RRFVYSS+AGAFGGLLFFRSPVTRWA++AFGAG+
Sbjct: 1   MAEDKDLMPAKYDVNAKWDACLDLTVRRFVYSSMAGAFGGLLFFRSPVTRWAAVAFGAGI 60

Query: 118 GIGSAYTDCNSLFEGSTAKFASPKLTGPQTSQV 151
           GIGSAYTDC+ +F+GS+A  A PKL      QV
Sbjct: 61  GIGSAYTDCSRIFDGSSATLAPPKLADAPAPQV 93

[Close]

BLAST of CmoCh09G013350 vs. TrEMBL
Match: A0A0D2U126_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_013G137900 PE=4 SV=1)

HSP 1 Score: 146.4 bits (368), Expect = 3.1e-32
Identity = 67/85 (78.82%), Postives = 76/85 (89.41%), Query Frame = 1


Query: 58  MAENKDVVPPPHDLNAKWDACLDLTLRRFVYSSLAGAFGGLLFFRSPVTRWASIAFGAGL 117
           M ENK++ P  +D+NAKWDAC+DLTLRRFVYSSLAGAFGGLLFFRSPVTRWAS+AFGAG+
Sbjct: 1   MGENKELTPSKYDMNAKWDACIDLTLRRFVYSSLAGAFGGLLFFRSPVTRWASVAFGAGI 60

Query: 118 GIGSAYTDCNSLFEGSTAKFASPKL 143
           GIGSAYTDC+SLF G + K A PKL
Sbjct: 61  GIGSAYTDCSSLFGGYSPKLAPPKL 85

[Close]

BLAST of CmoCh09G013350 vs. TrEMBL
Match: M5XGA8_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013917mg PE=4 SV=1)

HSP 1 Score: 146.0 bits (367), Expect = 4.1e-32
Identity = 69/95 (72.63%), Postives = 80/95 (84.21%), Query Frame = 1


Query: 58  MAENKDVVPPPHDLNAKWDACLDLTLRRFVYSSLAGAFGGLLFFRSPVTRWASIAFGAGL 117
           MA+NK+  PP +D+NAKWDACLDLT+RRFVYSSL GAFGGLL FRSPV+RWAS+AFGAGL
Sbjct: 1   MADNKEFFPPQYDVNAKWDACLDLTVRRFVYSSLGGAFGGLLLFRSPVSRWASVAFGAGL 60

Query: 118 GIGSAYTDCNSLFEGSTAKFASPKL---TGPQTSQ 150
           GIGSAYT+C+ LFEGS AK A+PK+     PQ  Q
Sbjct: 61  GIGSAYTECSRLFEGSPAKLAAPKIIETPAPQDGQ 95

[Close]

BLAST of CmoCh09G013350 vs. TrEMBL
Match: A0A067GWJ1_CITSI (Uncharacterized protein (Fragment) OS=Citrus sinensis GN=CISIN_1g041737mg PE=4 SV=1)

HSP 1 Score: 143.3 bits (360), Expect = 2.6e-31
Identity = 64/83 (77.11%), Postives = 75/83 (90.36%), Query Frame = 1


Query: 61  NKDVVPPPHDLNAKWDACLDLTLRRFVYSSLAGAFGGLLFFRSPVTRWASIAFGAGLGIG 120
           +K +VPP +DLNAKWDAC+DLT+RRFVYSSL GAF GLLFFRSPVTRWAS+AFGAGLGIG
Sbjct: 63  SKQIVPPKYDLNAKWDACIDLTVRRFVYSSLGGAFAGLLFFRSPVTRWASVAFGAGLGIG 122

Query: 121 SAYTDCNSLFEGSTAKFASPKLT 144
           SAYTDC+  F+GS +K ASPK++
Sbjct: 123 SAYTDCSHFFDGSPSKLASPKIS 145

[Close]

BLAST of CmoCh09G013350 vs. TAIR10
Match: AT1G72170.1 (AT1G72170.1 Domain of unknown function (DUF543))

HSP 1 Score: 136.0 bits (341), Expect = 2.1e-32
Identity = 67/96 (69.79%), Postives = 77/96 (80.21%), Query Frame = 1


Query: 58  MAENKDVVPPPHDLNAKWDACLDLTLRRFVYSSLAGAFGGLLFFRSPVTRWASIAFGAGL 117
           MAE KD VPP +D+NAKWDACLDLT+RRFVYSSL GAF GLLFFRSPVTRWASIA GAG+
Sbjct: 1   MAEKKDSVPPEYDVNAKWDACLDLTVRRFVYSSLGGAFAGLLFFRSPVTRWASIALGAGI 60

Query: 118 GIGSAYTDCNSLFE---GSTAKFASPKLTGPQTSQV 151
           GIGSAY+DC+  F+    S+A  A+PK    +TS V
Sbjct: 61  GIGSAYSDCSRAFDSPSSSSANLAAPKNNITETSPV 96

[Close]

BLAST of CmoCh09G013350 vs. TAIR10
Match: AT1G22520.2 (AT1G22520.2 Domain of unknown function (DUF543))

HSP 1 Score: 123.6 bits (309), Expect = 1.1e-28
Identity = 61/85 (71.76%), Postives = 69/85 (81.18%), Query Frame = 1


Query: 70  DLNAKWDACLDLTLRRFVYSSLAGAFGGLLFFRSPVTRWASIAFGAGLGIGSAYTDCNSL 129
           D+NAKWDACLDLT RRFVYSSL GAF GLLFFRSPVTRWASIAFGAG+GIGSAYTDC+ +
Sbjct: 12  DVNAKWDACLDLTARRFVYSSLGGAFAGLLFFRSPVTRWASIAFGAGIGIGSAYTDCSRV 71

Query: 130 FEGSTAK----FASPKLTGPQTSQV 151
           F+ S++      A+PK T    SQV
Sbjct: 72  FDASSSTSATLLAAPKSTETSVSQV 96

[Close]

BLAST of CmoCh09G013350 vs. NCBI nr
Match: gi|659119496|ref|XP_008459688.1| (PREDICTED: uncharacterized protein LOC103498730 isoform X2 [Cucumis melo])

HSP 1 Score: 183.3 bits (464), Expect = 3.3e-43
Identity = 88/96 (91.67%), Postives = 90/96 (93.75%), Query Frame = 1


Query: 58  MAENKDVVPPPHDLNAKWDACLDLTLRRFVYSSLAGAFGGLLFFRSPVTRWASIAFGAGL 117
           MAENK VVPPPHDLNAKWDACLDLTLRRFVYSS AGAFGGLLFFRSPVTRWASIAFGAGL
Sbjct: 1   MAENKGVVPPPHDLNAKWDACLDLTLRRFVYSSFAGAFGGLLFFRSPVTRWASIAFGAGL 60

Query: 118 GIGSAYTDCNSLFEGSTAKFASPKLTGPQTSQVKFT 154
           GIGSAYTDCNSLF+GSTAKF SPK+T  Q SQVKFT
Sbjct: 61  GIGSAYTDCNSLFQGSTAKFTSPKITEAQPSQVKFT 96

[Close]

BLAST of CmoCh09G013350 vs. NCBI nr
Match: gi|778708139|ref|XP_011656128.1| (PREDICTED: MICOS complex subunit Mic10 isoform X2 [Cucumis sativus])

HSP 1 Score: 180.6 bits (457), Expect = 2.1e-42
Identity = 87/95 (91.58%), Postives = 89/95 (93.68%), Query Frame = 1


Query: 58  MAENKDVVPPPHDLNAKWDACLDLTLRRFVYSSLAGAFGGLLFFRSPVTRWASIAFGAGL 117
           MAENK VVPPPHDL+AKWDACLDLTLRRFVYSS AGAFGGLLFFRSPVTRWASIAFGAGL
Sbjct: 1   MAENKGVVPPPHDLSAKWDACLDLTLRRFVYSSFAGAFGGLLFFRSPVTRWASIAFGAGL 60

Query: 118 GIGSAYTDCNSLFEGSTAKFASPKLTGPQTSQVKF 153
           GIGSAYTDCNSLFEGSTAKF SPK+T  Q SQVKF
Sbjct: 61  GIGSAYTDCNSLFEGSTAKFTSPKITEAQPSQVKF 95

[Close]

BLAST of CmoCh09G013350 vs. NCBI nr
Match: gi|700197547|gb|KGN52724.1| (hypothetical protein Csa_5G652290 [Cucumis sativus])

HSP 1 Score: 176.4 bits (446), Expect = 4.0e-41
Identity = 85/93 (91.40%), Postives = 87/93 (93.55%), Query Frame = 1


Query: 58  MAENKDVVPPPHDLNAKWDACLDLTLRRFVYSSLAGAFGGLLFFRSPVTRWASIAFGAGL 117
           MAENK VVPPPHDL+AKWDACLDLTLRRFVYSS AGAFGGLLFFRSPVTRWASIAFGAGL
Sbjct: 1   MAENKGVVPPPHDLSAKWDACLDLTLRRFVYSSFAGAFGGLLFFRSPVTRWASIAFGAGL 60

Query: 118 GIGSAYTDCNSLFEGSTAKFASPKLTGPQTSQV 151
           GIGSAYTDCNSLFEGSTAKF SPK+T  Q SQV
Sbjct: 61  GIGSAYTDCNSLFEGSTAKFTSPKITEAQPSQV 93

[Close]

BLAST of CmoCh09G013350 vs. NCBI nr
Match: gi|659119494|ref|XP_008459687.1| (PREDICTED: uncharacterized protein LOC103498730 isoform X1 [Cucumis melo])

HSP 1 Score: 175.6 bits (444), Expect = 6.9e-41
Identity = 84/92 (91.30%), Postives = 86/92 (93.48%), Query Frame = 1


Query: 58  MAENKDVVPPPHDLNAKWDACLDLTLRRFVYSSLAGAFGGLLFFRSPVTRWASIAFGAGL 117
           MAENK VVPPPHDLNAKWDACLDLTLRRFVYSS AGAFGGLLFFRSPVTRWASIAFGAGL
Sbjct: 1   MAENKGVVPPPHDLNAKWDACLDLTLRRFVYSSFAGAFGGLLFFRSPVTRWASIAFGAGL 60

Query: 118 GIGSAYTDCNSLFEGSTAKFASPKLTGPQTSQ 150
           GIGSAYTDCNSLF+GSTAKF SPK+T  Q SQ
Sbjct: 61  GIGSAYTDCNSLFQGSTAKFTSPKITEAQPSQ 92

[Close]

BLAST of CmoCh09G013350 vs. NCBI nr
Match: gi|449447629|ref|XP_004141570.1| (PREDICTED: MICOS complex subunit Mic10 isoform X1 [Cucumis sativus])

HSP 1 Score: 174.9 bits (442), Expect = 1.2e-40
Identity = 84/92 (91.30%), Postives = 86/92 (93.48%), Query Frame = 1


Query: 58  MAENKDVVPPPHDLNAKWDACLDLTLRRFVYSSLAGAFGGLLFFRSPVTRWASIAFGAGL 117
           MAENK VVPPPHDL+AKWDACLDLTLRRFVYSS AGAFGGLLFFRSPVTRWASIAFGAGL
Sbjct: 1   MAENKGVVPPPHDLSAKWDACLDLTLRRFVYSSFAGAFGGLLFFRSPVTRWASIAFGAGL 60

Query: 118 GIGSAYTDCNSLFEGSTAKFASPKLTGPQTSQ 150
           GIGSAYTDCNSLFEGSTAKF SPK+T  Q SQ
Sbjct: 61  GIGSAYTDCNSLFEGSTAKFTSPKITEAQPSQ 92

The following BLAST results are available for this feature:

BLAST of CmoCh09G013350 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmoCh09G013350 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KUY2_CUCSA	2.8e-41	91.40	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G652290 PE=4 SV=1	[more]
A0A061FS50_THECC	1.4e-32	72.04	Domain of Uncharacterized protein function OS=Theobroma cacao GN=TCM_036507 PE=4...	[more]
A0A0D2U126_GOSRA	3.1e-32	78.82	Uncharacterized protein OS=Gossypium raimondii GN=B456_013G137900 PE=4 SV=1	[more]
M5XGA8_PRUPE	4.1e-32	72.63	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013917mg PE=4 SV=1	[more]
A0A067GWJ1_CITSI	2.6e-31	77.11	Uncharacterized protein (Fragment) OS=Citrus sinensis GN=CISIN_1g041737mg PE=4 S...	[more]

BLAST of CmoCh09G013350 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G72170.1	2.1e-32	69.79	Domain of unknown function (DUF543)	[more]
AT1G22520.2	1.1e-28	71.76	Domain of unknown function (DUF543)	[more]

BLAST of CmoCh09G013350 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659119496\|ref\|XP_008459688.1\|	3.3e-43	91.67	PREDICTED: uncharacterized protein LOC103498730 isoform X2 [Cucumis melo]	[more]
gi\|778708139\|ref\|XP_011656128.1\|	2.1e-42	91.58	PREDICTED: MICOS complex subunit Mic10 isoform X2 [Cucumis sativus]	[more]
gi\|700197547\|gb\|KGN52724.1\|	4.0e-41	91.40	hypothetical protein Csa_5G652290 [Cucumis sativus]	[more]
gi\|659119494\|ref\|XP_008459687.1\|	6.9e-41	91.30	PREDICTED: uncharacterized protein LOC103498730 isoform X1 [Cucumis melo]	[more]
gi\|449447629\|ref\|XP_004141570.1\|	1.2e-40	91.30	PREDICTED: MICOS complex subunit Mic10 isoform X1 [Cucumis sativus]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR007512	Mic10

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0061617	MICOS complex
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh09G013350.1	CmoCh09G013350.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007512	Protein of unknown function DUF543	PANTHER	PTHR21304	UNCHARACTERIZED	coord: 58..151 score: 3.1
IPR007512	Protein of unknown function DUF543	PFAM	PF04418	DUF543	coord: 60..130 score: 3.7
None	No IPR available	PANTHER	PTHR21304:SF0	MITOCHONDRIAL INNER MEMBRANE ORGANIZING SYSTEM PROTEIN F54A3.5	coord: 58..151 score: 3.1

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh09G013350	CmaCh09G012170	Cucurbita maxima (Rimu)	cmacmoB029
CmoCh09G013350	Cp4.1LG06g10210	Cucurbita pepo (Zucchini)	cmocpeB035
CmoCh09G013350	Bhi06G000233	Wax gourd	cmowgoB0001
CmoCh09G013350	CsGy5G030790	Cucumber (Gy14) v2	cgybcmoB551

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh09G013350	Bottle gourd (USVL1VR-Ls)	cmolsiB025
CmoCh09G013350	Melon (DHL92) v3.6.1	cmomedB000
CmoCh09G013350	Cucumber (Chinese Long) v3	cmocucB0024
CmoCh09G013350	Watermelon (97103) v2	cmowmbB028
CmoCh09G013350	Wax gourd	cmowgoB0004
CmoCh09G013350	Cucumber (Gy14) v1	cgycmoB0082
CmoCh09G013350	Wild cucumber (PI 183967)	cmocpiB020
CmoCh09G013350	Cucumber (Chinese Long) v2	cmocuB020
CmoCh09G013350	Melon (DHL92) v3.5.1	cmomeB000
CmoCh09G013350	Watermelon (Charleston Gray)	cmowcgB027
CmoCh09G013350	Watermelon (97103) v1	cmowmB015