CmoCh09G011870 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh09G011870
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionPentatricopeptide repeat-containing protein
LocationCmo_Chr09 : 8696660 .. 8698108 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCGGCAACACCTTCTTCGTCCCTGCAACTATAAGACTCTAGAAACTGTTGCTGTTCATCTTGCCCCCAAAACTCCATTGCTTCACAACTCAATCTCCTCATCATCCTCTCTTTACCAACCAGACTTAAATGTTCATAACGAATTGAAAACTCTGAGTGCCACCAACATAAACCATAAACACCTTGAACAGCAACCAGATTTCTCAATTGGGTCTCCATGTAGGGTCCAGAAACTCATTGCTTCCCAATCTGATCCTCTTCTTGCCAAGGAAATTTTCGATTATGCTTGTCGTCAACCCCATTTTCGCCCATCGTCTTCCTCTTTTCTCGTTCTTATCCTCAAGCTAGGGCGTTCCAAGTACTTCTCTCTTATTGATGATCTTCTTCTTAGCTTCAAGTCTAGAGGCTACCCTCTCTCTCCAACTGTTTTCTCCTACATAATCAAAATCTATGGTGAAGCTGATTTACCAGATAAAGCTCTCAAAACCTTTTATACTATGATCGAGTTTGGCTGTACGCCATCGTCCAAACAGTTGAACCGCATACTAGAAATTTTGGTTTCTCACCGTAACTTCATTCGGCCAGCTTTTGATCTTTTCAAGAATGCCCGTCATCATGGTGTGTTGCCCAACACCAAGTCTTACAACATCCTCATGCGTGTATTCTGTTGGAATGGAGATCTTAGCATTGCCTACACTCTGTTCAACAAAATGTTCAAACGAGATGTCGTTCCAGATGTCGAGTCGTATCGGATATTAATGCAGGGTCTATGCAGGAAGAATCAAGTGATTGGTGCCGTCGACTTGCTAGAAGATATGTTAAACAAAGGCTACGTTCCAGACACATTGAGCTATGCCACTTTGTTAAATAGTTTATGTAGGAAGAAAAAGCTGAGAGAAGCTTATAAACTTCTCTGTAGAATGAAGGTTAAGGGTTGCAATCCTGATGTTGCTCATTACAATACAGTTATAACGGGATTTTGCAGAGAAGGGCGCGCTCTCGATGCTTGTAAGATTTTGGAGGATATGCAGTCGAACCGTTGTTTGCCTAACTTAGTGTCTTACCAGAGCTTGACTAATGGATTATGTGATCAAGGAATGTTTGAATTGGCAAAGGATTATGTTGAGGAGATGACATTAAAGGGTTTTTGCCCACATTTCTCTGTCATTCATACTTTGGTTAAGGGTTTCATTAACGTTGGCAGAATCGACGATTCGTGTAGCGTTCTTGAAGACATGCTAAAGCATGGGAAAGCCCCTCATTCTGAAACTTGGGAGATGATTATATCTGGAGTTTGTGAAGTTGAGGACACTGTAAAGTTATGTGAAATTTTAGAGAAGATTTTGAAGAAAGATGTTAGAAGAGATACTAGAATAGTGGAAGCAGGCTCTGGGTTGGGTGAGTATCTAATTAGGAAGTTACAAGCCTCCAAATCCCGAAGGGCTTGA

mRNA sequence

ATGCGGCAACACCTTCTTCGTCCCTGCAACTATAAGACTCTAGAAACTGTTGCTGTTCATCTTGCCCCCAAAACTCCATTGCTTCACAACTCAATCTCCTCATCATCCTCTCTTTACCAACCAGACTTAAATGTTCATAACGAATTGAAAACTCTGAGTGCCACCAACATAAACCATAAACACCTTGAACAGCAACCAGATTTCTCAATTGGGTCTCCATGTAGGGTCCAGAAACTCATTGCTTCCCAATCTGATCCTCTTCTTGCCAAGGAAATTTTCGATTATGCTTGTCGTCAACCCCATTTTCGCCCATCGTCTTCCTCTTTTCTCGTTCTTATCCTCAAGCTAGGGCGTTCCAAGTACTTCTCTCTTATTGATGATCTTCTTCTTAGCTTCAAGTCTAGAGGCTACCCTCTCTCTCCAACTGTTTTCTCCTACATAATCAAAATCTATGGTGAAGCTGATTTACCAGATAAAGCTCTCAAAACCTTTTATACTATGATCGAGTTTGGCTGTACGCCATCGTCCAAACAGTTGAACCGCATACTAGAAATTTTGGTTTCTCACCGTAACTTCATTCGGCCAGCTTTTGATCTTTTCAAGAATGCCCGTCATCATGGTGTGTTGCCCAACACCAAGTCTTACAACATCCTCATGCGTGTATTCTGTTGGAATGGAGATCTTAGCATTGCCTACACTCTGTTCAACAAAATGTTCAAACGAGATGTCGTTCCAGATGTCGAGTCGTATCGGATATTAATGCAGGGTCTATGCAGGAAGAATCAAGTGATTGGTGCCGTCGACTTGCTAGAAGATATGTTAAACAAAGGCTACGTTCCAGACACATTGAGCTATGCCACTTTGTTAAATAGTTTATGTAGGAAGAAAAAGCTGAGAGAAGCTTATAAACTTCTCTGTAGAATGAAGGTTAAGGGTTGCAATCCTGATGTTGCTCATTACAATACAGTTATAACGGGATTTTGCAGAGAAGGGCGCGCTCTCGATGCTTGTAAGATTTTGGAGGATATGCAGTCGAACCGTTGTTTGCCTAACTTAGTGTCTTACCAGAGCTTGACTAATGGATTATGTGATCAAGGAATGTTTGAATTGGCAAAGGATTATGTTGAGGAGATGACATTAAAGGGTTTTTGCCCACATTTCTCTGTCATTCATACTTTGGTTAAGGGTTTCATTAACGTTGGCAGAATCGACGATTCGTGTAGCGTTCTTGAAGACATGCTAAAGCATGGGAAAGCCCCTCATTCTGAAACTTGGGAGATGATTATATCTGGAGTTTGTGAAGTTGAGGACACTGTAAAGTTATGTGAAATTTTAGAGAAGATTTTGAAGAAAGATGTTAGAAGAGATACTAGAATAGTGGAAGCAGGCTCTGGGTTGGGTGAGTATCTAATTAGGAAGTTACAAGCCTCCAAATCCCGAAGGGCTTGA

Coding sequence (CDS)

ATGCGGCAACACCTTCTTCGTCCCTGCAACTATAAGACTCTAGAAACTGTTGCTGTTCATCTTGCCCCCAAAACTCCATTGCTTCACAACTCAATCTCCTCATCATCCTCTCTTTACCAACCAGACTTAAATGTTCATAACGAATTGAAAACTCTGAGTGCCACCAACATAAACCATAAACACCTTGAACAGCAACCAGATTTCTCAATTGGGTCTCCATGTAGGGTCCAGAAACTCATTGCTTCCCAATCTGATCCTCTTCTTGCCAAGGAAATTTTCGATTATGCTTGTCGTCAACCCCATTTTCGCCCATCGTCTTCCTCTTTTCTCGTTCTTATCCTCAAGCTAGGGCGTTCCAAGTACTTCTCTCTTATTGATGATCTTCTTCTTAGCTTCAAGTCTAGAGGCTACCCTCTCTCTCCAACTGTTTTCTCCTACATAATCAAAATCTATGGTGAAGCTGATTTACCAGATAAAGCTCTCAAAACCTTTTATACTATGATCGAGTTTGGCTGTACGCCATCGTCCAAACAGTTGAACCGCATACTAGAAATTTTGGTTTCTCACCGTAACTTCATTCGGCCAGCTTTTGATCTTTTCAAGAATGCCCGTCATCATGGTGTGTTGCCCAACACCAAGTCTTACAACATCCTCATGCGTGTATTCTGTTGGAATGGAGATCTTAGCATTGCCTACACTCTGTTCAACAAAATGTTCAAACGAGATGTCGTTCCAGATGTCGAGTCGTATCGGATATTAATGCAGGGTCTATGCAGGAAGAATCAAGTGATTGGTGCCGTCGACTTGCTAGAAGATATGTTAAACAAAGGCTACGTTCCAGACACATTGAGCTATGCCACTTTGTTAAATAGTTTATGTAGGAAGAAAAAGCTGAGAGAAGCTTATAAACTTCTCTGTAGAATGAAGGTTAAGGGTTGCAATCCTGATGTTGCTCATTACAATACAGTTATAACGGGATTTTGCAGAGAAGGGCGCGCTCTCGATGCTTGTAAGATTTTGGAGGATATGCAGTCGAACCGTTGTTTGCCTAACTTAGTGTCTTACCAGAGCTTGACTAATGGATTATGTGATCAAGGAATGTTTGAATTGGCAAAGGATTATGTTGAGGAGATGACATTAAAGGGTTTTTGCCCACATTTCTCTGTCATTCATACTTTGGTTAAGGGTTTCATTAACGTTGGCAGAATCGACGATTCGTGTAGCGTTCTTGAAGACATGCTAAAGCATGGGAAAGCCCCTCATTCTGAAACTTGGGAGATGATTATATCTGGAGTTTGTGAAGTTGAGGACACTGTAAAGTTATGTGAAATTTTAGAGAAGATTTTGAAGAAAGATGTTAGAAGAGATACTAGAATAGTGGAAGCAGGCTCTGGGTTGGGTGAGTATCTAATTAGGAAGTTACAAGCCTCCAAATCCCGAAGGGCTTGA
Homology
[Close]
BLAST of CmoCh09G011870 vs. Swiss-Prot
Match: PP298_ARATH (Pentatricopeptide repeat-containing protein At4g01400, mitochondrial OS=Arabidopsis thaliana GN=At4g01400 PE=2 SV=2)

HSP 1 Score: 557.4 bits (1435), Expect = 1.6e-157
Identity = 261/419 (62.29%), Postives = 332/419 (79.24%), Query Frame = 1 

Query: 60  KHLEQQPDFSIGSPCRVQKLIASQSDPLLAKEIFDYACRQPHFRPSSSSFLVLILKLGRS 119
           K +   P   IGSP RVQKLIASQSDPLLAKEIFDYA +QP+FR S SS L+LILKLGR 
Sbjct: 38  KPIVSNPKSPIGSPTRVQKLIASQSDPLLAKEIFDYASQQPNFRHSRSSHLILILKLGRG 97

Query: 120 KYFSLIDDLLLSFKSRGYPLSPTVFSYIIKIYGEADLPDKALKTFYTMIEFGCTPSSKQL 179
           +YF+LIDD+L   +S GYPL+  +F+Y+IK+Y EA LP+K L TFY M+EF  TP  K L
Sbjct: 98  RYFNLIDDVLAKHRSSGYPLTGEIFTYLIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHL 157

Query: 180 NRILEILVSHRNFIRPAFDLFKNARHHGVLPNTKSYNILMRVFCWNGDLSIAYTLFNKMF 239
           NRIL++LVSHR +++ AF+LFK++R HGV+PNT+SYN+LM+ FC N DLSIAY LF KM 
Sbjct: 158 NRILDVLVSHRGYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKML 217

Query: 240 KRDVVPDVESYRILMQGLCRKNQVIGAVDLLEDMLNKGYVPDTLSYATLLNSLCRKKKLR 299
           +RDVVPDV+SY+IL+QG CRK QV GA++LL+DMLNKG+VPD LSY TLLNSLCRK +LR
Sbjct: 218 ERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLR 277

Query: 300 EAYKLLCRMKVKGCNPDVAHYNTVITGFCREGRALDACKILEDMQSNRCLPNLVSYQSLT 359
           EAYKLLCRMK+KGCNPD+ HYNT+I GFCRE RA+DA K+L+DM SN C PN VSY++L 
Sbjct: 278 EAYKLLCRMKLKGCNPDLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLI 337

Query: 360 NGLCDQGMFELAKDYVEEMTLKGFCPHFSVIHTLVKGFINVGRIDDSCSVLEDMLKHGKA 419
            GLCDQGMF+  K Y+EEM  KGF PHFSV + LVKGF + G+++++C V+E ++K+G+ 
Sbjct: 338 GGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGET 397

Query: 420 PHSETWEMIISGVCEVEDTVKLCEILEKILKKDVRRDTRIVEAGSGLGEYLIRKLQASK 479
            HS+TWEM+I  +C  +++ K+   LE  +K+++  DTRIV+ G GLG YL  KLQ  +
Sbjct: 398 LHSDTWEMVIPLICNEDESEKIKLFLEDAVKEEITGDTRIVDVGIGLGSYLSSKLQMKR 456

[Close]
BLAST of CmoCh09G011870 vs. Swiss-Prot
Match: PP418_ARATH (Pentatricopeptide repeat-containing protein At5g46100 OS=Arabidopsis thaliana GN=At5g46100 PE=2 SV=1)

HSP 1 Score: 207.2 bits (526), Expect = 4.0e-52
Identity = 113/372 (30.38%), Postives = 194/372 (52.15%), Query Frame = 1 

Query: 72  SPCRVQKLIASQSDPLLAKEIFDYACRQ--PHFRPSSSSFLVLILKLGRSKYFSLIDDLL 131
           +P +V KL+ ++ D   +  +FD A  +    +    SSF  ++L+L  +  F   +DL+
Sbjct: 15  TPSQVIKLMRAEKDVEKSMAVFDSATAEYANGYVHDQSSFGYMVLRLVSANKFKAAEDLI 74

Query: 132 LSFKSRGYPLSPTVFSYIIKIYGEADLPDKALKTFYTMIEFGCTPSSKQLNRILEILVSH 191
           +  K     +S  +   I + YG    P  +L+ F+ M +F C PS K    +L ILV  
Sbjct: 75  VRMKIENCVVSEDILLSICRGYGRVHRPFDSLRVFHKMKDFDCDPSQKAYVTVLAILVEE 134

Query: 192 RNFIRPAFDLFKNARHHGVLPNTKSYNILMRVFCWN-GDLSIAYTLFNKMFKRDVVPDVE 251
            N +  AF  +KN R  G+ P   S N+L++  C N G +     +F +M KR   PD  
Sbjct: 135 -NQLNLAFKFYKNMREIGLPPTVASLNVLIKALCRNDGTVDAGLKIFLEMPKRGCDPDSY 194

Query: 252 SYRILMQGLCRKNQVIGAVDLLEDMLNKGYVPDTLSYATLLNSLCRKKKLREAYKLLCRM 311
           +Y  L+ GLCR  ++  A  L  +M+ K   P  ++Y +L+N LC  K + EA + L  M
Sbjct: 195 TYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEM 254

Query: 312 KVKGCNPDVAHYNTVITGFCREGRALDACKILEDMQSNRCLPNLVSYQSLTNGLCDQGMF 371
           K KG  P+V  Y++++ G C++GR+L A ++ E M +  C PN+V+Y +L  GLC +   
Sbjct: 255 KSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKI 314

Query: 372 ELAKDYVEEMTLKGFCPHFSVIHTLVKGFINVGRIDDSCSVLEDMLKHGKAPHSETWEM- 431
           + A + ++ M L+G  P   +   ++ GF  + +  ++ + L++M+  G  P+  TW + 
Sbjct: 315 QEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFLDEMILGGITPNRLTWNIH 374

Query: 432 ------IISGVC 434
                 ++ G+C
Sbjct: 375 VKTSNEVVRGLC 385

[Close]
BLAST of CmoCh09G011870 vs. Swiss-Prot
Match: PP407_ARATH (Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana GN=EMB2745 PE=2 SV=1)

HSP 1 Score: 191.0 bits (484), Expect = 2.9e-47
Identity = 107/338 (31.66%), Postives = 180/338 (53.25%), Query Frame = 1 

Query: 120 KYFSLIDDLLLSFKSRGYPLSPTVFSYIIKIYGEADLPDKALKTFYTMIEFGCTPSSKQL 179
           +Y SL+   L       Y  S +VF  ++K Y    L DKAL   +     G  P     
Sbjct: 114 EYASLVFKSLQETYDLCYSTS-SVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSY 173

Query: 180 NRILEILVSHRNFIRPAFDLFKNARHHGVLPNTKSYNILMRVFCWNGDLSIAYTLFNKMF 239
           N +L+  +  +  I  A ++FK      V PN  +YNIL+R FC+ G++ +A TLF+KM 
Sbjct: 174 NAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKME 233

Query: 240 KRDVVPDVESYRILMQGLCRKNQVIGAVDLLEDMLNKGYVPDTLSYATLLNSLCRKKKLR 299
            +  +P+V +Y  L+ G C+  ++     LL  M  KG  P+ +SY  ++N LCR+ +++
Sbjct: 234 TKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMK 293

Query: 300 EAYKLLCRMKVKGCNPDVAHYNTVITGFCREGRALDACKILEDMQSNRCLPNLVSYQSLT 359
           E   +L  M  +G + D   YNT+I G+C+EG    A  +  +M  +   P++++Y SL 
Sbjct: 294 EVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLI 353

Query: 360 NGLCDQGMFELAKDYVEEMTLKGFCPHFSVIHTLVKGFINVGRIDDSCSVLEDMLKHGKA 419
           + +C  G    A +++++M ++G CP+     TLV GF   G ++++  VL +M  +G +
Sbjct: 354 HSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFS 413

Query: 420 PHSETWEMIISGVC---EVEDTVKLCE-ILEKILKKDV 454
           P   T+  +I+G C   ++ED + + E + EK L  DV
Sbjct: 414 PSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDV 450

[Close]
BLAST of CmoCh09G011870 vs. Swiss-Prot
Match: PP327_ARATH (Pentatricopeptide repeat-containing protein At4g20090 OS=Arabidopsis thaliana GN=EMB1025 PE=3 SV=1)

HSP 1 Score: 185.3 bits (469), Expect = 1.6e-45
Identity = 113/407 (27.76%), Postives = 207/407 (50.86%), Query Frame = 1 

Query: 48  ELKTLSATNINHK-HLEQQPDFSIGSPCRVQKLIASQSDPLLAKEIFDYACRQPHFRPSS 107
           E + LS+  +N   HL      S+ SP    +++ +  +  +++++F  A +   F+   
Sbjct: 19  ESRILSSNPVNFSIHLRFSSSVSV-SPNPSMEVVENPLEAPISEKMFKSAPKMGSFKLGD 78

Query: 108 SSFLVLILKLGRSKYFSLIDDLLLSFKSRGYPLSPTVFSYIIKIYGEADLPDKALKTFYT 167
           S+   +I     S  F  ++ LL   +     +    F  + + YG+A LPDKA+  F+ 
Sbjct: 79  STLSSMIESYANSGDFDSVEKLLSRIRLENRVIIERSFIVVFRAYGKAHLPDKAVDLFHR 138

Query: 168 MI-EFGCTPSSKQLNRILEILVSHRNFIRPA--FDLFKNARHH-GVLPNTKSYNILMRVF 227
           M+ EF C  S K  N +L ++++   + R    +D   N+  +  + PN  S+N++++  
Sbjct: 139 MVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLSFNLVIKAL 198

Query: 228 CWNGDLSIAYTLFNKMFKRDVVPDVESYRILMQGLCRKNQVIGAVDLLEDMLNKGYVPDT 287
           C    +  A  +F  M +R  +PD  +Y  LM GLC++ ++  AV LL++M ++G  P  
Sbjct: 199 CKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSP 258

Query: 288 LSYATLLNSLCRKKKLREAYKLLCRMKVKGCNPDVAHYNTVITGFCREGRALDACKILED 347
           + Y  L++ LC+K  L    KL+  M +KGC P+   YNT+I G C +G+   A  +LE 
Sbjct: 259 VIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLER 318

Query: 348 MQSNRCLPNLVSYQSLTNGLCDQGMFELAKDYVEEMTLKGFCPHFSVIHTLVKGFINVGR 407
           M S++C+PN V+Y +L NGL  Q     A   +  M  +G+  +  +   L+ G    G+
Sbjct: 319 MVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGK 378

Query: 408 IDDSCSVLEDMLKHGKAPHSETWEMIISGVCEVEDTVKLCEILEKIL 450
            +++ S+   M + G  P+   + +++ G+C      +  EIL +++
Sbjct: 379 AEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMI 424

[Close]
BLAST of CmoCh09G011870 vs. Swiss-Prot
Match: PPR20_ARATH (Pentatricopeptide repeat-containing protein At1g07740, mitochondrial OS=Arabidopsis thaliana GN=At1g07740 PE=2 SV=1)

HSP 1 Score: 184.5 bits (467), Expect = 2.7e-45
Identity = 113/390 (28.97%), Postives = 197/390 (50.51%), Query Frame = 1 

Query: 85  DPLLAKEIFDYACRQPHFRPSSSSFLVLILKLGRSKYFSLIDDLLLSFKSRGYPLSPTVF 144
           DP  A  +F +  ++  FR    S+  LI KL +S+ F  +D +L   + R      ++F
Sbjct: 61  DPEEALSLF-HQYQEMGFRHDYPSYSSLIYKLAKSRNFDAVDQILRLVRYRNVRCRESLF 120

Query: 145 SYIIKIYGEADLPDKALKTFYTMIEFGCTPSSKQLNRILEILVSHRNFIRPAFDLFKNAR 204
             +I+ YG+A   DKA+  F+ +  F C  + + LN ++ +LV +   +  A   F  A+
Sbjct: 121 MGLIQHYGKAGSVDKAIDVFHKITSFDCVRTIQSLNTLINVLVDNGE-LEKAKSFFDGAK 180

Query: 205 HHGVLPNTKSYNILMRVFCWNGDLSIAYTLFNKMFKRDVVPDVESYRILMQGLCRKNQVI 264
              + PN+ S+NIL++ F    D   A  +F++M + +V P V +Y  L+  LCR + + 
Sbjct: 181 DMRLRPNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMG 240

Query: 265 GAVDLLEDMLNKGYVPDTLSYATLLNSLCRKKKLREAYKLLCRMKVKGCNPDVAHYNTVI 324
            A  LLEDM+ K   P+ +++  L+  LC K +  EA KL+  M+ +GC P + +Y  ++
Sbjct: 241 KAKSLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILM 300

Query: 325 TGFCREGRALDACKILEDMQSNRCLPNLVSYQSLTNGLCDQGMFELAKDYVEEMTLKGFC 384
           +   + GR  +A  +L +M+  R  P++V Y  L N LC +     A   + EM +KG  
Sbjct: 301 SDLGKRGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQMKGCK 360

Query: 385 PHFSVIHTLVKGFINVGRIDDSCSVLEDMLKHGKAPHSETWEMIISGVCEVEDTVKLCEI 444
           P+ +    ++ GF  +   D   +VL  ML     P   T+  +++G+ +  +    C +
Sbjct: 361 PNAATYRMMIDGFCRIEDFDSGLNVLNAMLASRHCPTPATFVCMVAGLIKGGNLDHACFV 420

Query: 445 LEKILKKDVRRDTRIVEAGSGLGEYLIRKL 475
           LE + KK+       +  GSG  + L+  L
Sbjct: 421 LEVMGKKN-------LSFGSGAWQNLLSDL 441

[Close]
BLAST of CmoCh09G011870 vs. TrEMBL
Match: A0A0A0K8U0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G014780 PE=4 SV=1)

HSP 1 Score: 860.9 bits (2223), Expect = 7.3e-247
Identity = 421/482 (87.34%), Postives = 448/482 (92.95%), Query Frame = 1 

Query: 1   MRQHLLRPCNYKTLETVAV-HLAPKTPLLHNSISSSSSLYQPDLNVHNELKTLSATNINH 60
           M QHLLRPCNY+T+ETVA  H+A K+PLL N ISSSSSLYQP LNVHNE K L  TN+ H
Sbjct: 1   MWQHLLRPCNYRTIETVAAAHVARKSPLLRNLISSSSSLYQPHLNVHNESKFL-ITNVKH 60

Query: 61  KHLEQQPDFSIGSPCRVQKLIASQSDPLLAKEIFDYACRQPHFRPSSSSFLVLILKLGRS 120
           +  E QPDFSIGSPCRVQKLIASQSDPLLAKEIFDYACRQPHFRPSSSS LVLILKLGRS
Sbjct: 61  EQCEDQPDFSIGSPCRVQKLIASQSDPLLAKEIFDYACRQPHFRPSSSSLLVLILKLGRS 120

Query: 121 KYFSLIDDLLLSFKSRGYPLSPTVFSYIIKIYGEADLPDKALKTFYTMIEFGCTPSSKQL 180
           KYFSLIDDLLLSFKSR YP++PT FSYIIKIYGEADLPDKALK FYTMI+FGCTPSSKQL
Sbjct: 121 KYFSLIDDLLLSFKSRRYPVTPTAFSYIIKIYGEADLPDKALKVFYTMIDFGCTPSSKQL 180

Query: 181 NRILEILVSHRNFIRPAFDLFKNARHHGVLPNTKSYNILMRVFCWNGDLSIAYTLFNKMF 240
           NRILEILVSHRNFIRPAFDLFKNARHHGVLPNTKSYNIL+R FCWNG++SIAYTLFNKMF
Sbjct: 181 NRILEILVSHRNFIRPAFDLFKNARHHGVLPNTKSYNILIRAFCWNGNISIAYTLFNKMF 240

Query: 241 KRDVVPDVESYRILMQGLCRKNQVIGAVDLLEDMLNKGYVPDTLSYATLLNSLCRKKKLR 300
           +R+V+PDVE+YR LMQGLCRKNQV GAVDLLEDMLNKGY+PDTLSYATLLNSLCRKKKLR
Sbjct: 241 ERNVIPDVETYRTLMQGLCRKNQVNGAVDLLEDMLNKGYIPDTLSYATLLNSLCRKKKLR 300

Query: 301 EAYKLLCRMKVKGCNPDVAHYNTVITGFCREGRALDACKILEDMQSNRCLPNLVSYQSLT 360
           EAYKLLCRMKVKGCNPD+AHYNTVI GFCREGRALDACKILEDMQSN CLPNLVSY+SLT
Sbjct: 301 EAYKLLCRMKVKGCNPDIAHYNTVIMGFCREGRALDACKILEDMQSNGCLPNLVSYESLT 360

Query: 361 NGLCDQGMFELAKDYVEEMTLKGFCPHFSVIHTLVKGFINVGRIDDSCSVLEDMLKHGKA 420
           NGLCDQGMFELAK YVEEMTLKGF PHFSVIH LVKGF ++GRI +SCSVLEDMLK GKA
Sbjct: 361 NGLCDQGMFELAKGYVEEMTLKGFYPHFSVIHALVKGFHSIGRIHESCSVLEDMLKRGKA 420

Query: 421 PHSETWEMIISGVCEVEDTVKLCEILEKILKKDVRRDTRIVEAGSGLGEYLIRKLQASKS 480
           PHS+TWE+IISG+CEVEDT K CE+ EKILKKDVRRDTRIVEAG+GLGEYLIRKLQAS S
Sbjct: 421 PHSDTWEIIISGICEVEDTAKFCEVWEKILKKDVRRDTRIVEAGTGLGEYLIRKLQASIS 480

Query: 481 RR 482
           RR
Sbjct: 481 RR 481

[Close]
BLAST of CmoCh09G011870 vs. TrEMBL
Match: A0A067HF57_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g012126mg PE=4 SV=1)

HSP 1 Score: 639.4 bits (1648), Expect = 3.5e-180
Identity = 314/475 (66.11%), Postives = 382/475 (80.42%), Query Frame = 1 

Query: 6   LRPCNYKTLETVAVHLAPKTPLLHNSISSSSSLYQPDLNVHNELKTLSATNINHKHLEQQ 65
           LR     T  T AV   PKTP L    SSSS   Q   +   + +  S +N       + 
Sbjct: 7   LRSSKIVTTVTGAVTFPPKTPSLIFCYSSSS---QESPSSPEQQQESSISN------SKS 66

Query: 66  PDFSIGSPCRVQKLIASQSDPLLAKEIFDYACRQPHFRPSSSSFLVLILKLGRSKYFSLI 125
           P   IGSPCRVQKLIASQSDPLLAKEIFDYA RQP+FR S+S++L+LILKLGR+KYFSLI
Sbjct: 67  P---IGSPCRVQKLIASQSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLI 126

Query: 126 DDLLLSFKSRGYPLSPTVFSYIIKIYGEADLPDKALKTFYTMIEFGCTPSSKQLNRILEI 185
           DD+L++ KS  YP++P++F+Y+IKIY E++LPD+ALKTF +M+EF C P  KQLNRILE+
Sbjct: 127 DDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILEL 186

Query: 186 LVSHRNFIRPAFDLFKNARHHGVLPNTKSYNILMRVFCWNGDLSIAYTLFNKMFKRDVVP 245
           LV+HRN++RPAFDLFK+A  HGVLPNTKSYNI+MR FC+NGD+SIAYTLFNKMF+R V+P
Sbjct: 187 LVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMP 246

Query: 246 DVESYRILMQGLCRKNQVIGAVDLLEDMLNKGYVPDTLSYATLLNSLCRKKKLREAYKLL 305
           DVESYRILMQGLCRK+QV  AVDLLEDMLNKG+VPDTLSY TLLNSLCRKKKLREAYKLL
Sbjct: 247 DVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLL 306

Query: 306 CRMKVKGCNPDVAHYNTVITGFCREGRALDACKILEDMQSNRCLPNLVSYQSLTNGLCDQ 365
           CRMKVKGCNPD+ HYNTV+ GFCREGRA+DACK+LEDM SN CLPNLVSY++L  GLCDQ
Sbjct: 307 CRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQ 366

Query: 366 GMFELAKDYVEEMTLKGFCPHFSVIHTLVKGFINVGRIDDSCSVLEDMLKHGKAPHSETW 425
           GMF++AK Y++ M  KGF PHFSV H L+KGF NVG++D++C VLE++LK G+APH +TW
Sbjct: 367 GMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTW 426

Query: 426 EMIISGVCEVEDTVKLCEILEKILKKDVRRDTRIVEAGSGLGEYLIRKLQASKSR 481
            MI+  +C  E+  KL E+L +I+K +++ DTRIVEAG GL +YLI K ++   R
Sbjct: 427 VMIVPQICAGEEMEKLGEVLNEIVKVEIKGDTRIVEAGIGLEDYLIGKTRSRPRR 469

[Close]
BLAST of CmoCh09G011870 vs. TrEMBL
Match: M5XNI8_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa021922mg PE=4 SV=1)

HSP 1 Score: 627.5 bits (1617), Expect = 1.4e-176
Identity = 315/484 (65.08%), Postives = 380/484 (78.51%), Query Frame = 1 

Query: 1   MRQHLLRPCNYKTLETVAVHLA--PKTPLLHNSISSSSSLYQPDLNVHNELKTLSATNIN 60
           M+ HLL   + K   TV   LA  PK P    S SSSSS++      HN+         N
Sbjct: 1   MKMHLLFQRSSKAAVTVTRSLALPPKPP----SSSSSSSVFFLSSQPHNQ---------N 60

Query: 61  HKHLEQQPDFSIGSPCRVQKLIASQSDPLLAKEIFDYACRQPHFRPSSSSFLVLILKLGR 120
           H+        SIGSP R+Q LIASQSDPLLAKEIFD A RQPHFR S SSF  LILKLGR
Sbjct: 61  HEI------GSIGSPSRIQNLIASQSDPLLAKEIFDLAARQPHFRHSYSSFFTLILKLGR 120

Query: 121 SKYFSLIDDLLLSFKSRGYPLSPTVFSYIIKIYGEADLPDKALKTFYTMIEFGCTPSSKQ 180
           SKYFSL+DDLL+  K++ Y +SP +F+++IKIYGEA+LP KAL+TFYTM+EF C PS K 
Sbjct: 121 SKYFSLVDDLLIRLKTQNYSVSPALFAHLIKIYGEANLPQKALRTFYTMVEFDCRPSVKH 180

Query: 181 LNRILEILVSHRNFIRPAFDLFKNARHHGVLPNTKSYNILMRVFCWNGDLSIAYTLFNKM 240
           LNRIL+ILVSHRNF+RPAFD+FK+A  HGV+PNT+SYNILMR FC NGDLSIAY LFNKM
Sbjct: 181 LNRILQILVSHRNFLRPAFDVFKDAHRHGVMPNTQSYNILMRAFCLNGDLSIAYQLFNKM 240

Query: 241 FKRDVVPDVESYRILMQGLCRKNQVIGAVDLLEDMLNKGYVPDTLSYATLLNSLCRKKKL 300
           F+RD+VPDV+SYRILMQGLCRK QV  AVD LEDMLNKG+VPD+LSY +LLNSLCRKKKL
Sbjct: 241 FERDLVPDVQSYRILMQGLCRKGQVNTAVDFLEDMLNKGFVPDSLSYTSLLNSLCRKKKL 300

Query: 301 REAYKLLCRMKVKGCNPDVAHYNTVITGFCREGRALDACKILEDMQSNRCLPNLVSYQSL 360
           REAYKLLCRMKVKGCNPD+ HYNTVI GFCREGR +DACK+LEDM SN CLPNLVSY++L
Sbjct: 301 REAYKLLCRMKVKGCNPDIVHYNTVILGFCREGRPVDACKVLEDMASNGCLPNLVSYRTL 360

Query: 361 TNGLCDQGMFELAKDYVEEMTLKGFCPHFSVIHTLVKGFINVGRIDDSCSVLEDMLKHGK 420
            +GLCD GM + AK Y+E M  +GF PHFSV+H LVKGF NVGR++++ +VLE++LKHG+
Sbjct: 361 VSGLCDHGMLDEAKSYMETMISRGFSPHFSVVHALVKGFCNVGRVEEAFAVLEEVLKHGE 420

Query: 421 APHSETWEMIISGVCEVEDTVKLCEILEKILKKDVRRDTRIVEAGSGLGEYLIRKLQASK 480
            PH++TW  I+ G+CE  +  +L EIL +++K ++R +TRIVEA  GL +YLI+K++A K
Sbjct: 421 VPHTDTWLTIVPGICEEIELERLEEILREVMKVEIRPNTRIVEAAIGLEDYLIKKIRA-K 464

Query: 481 SRRA 483
            RRA
Sbjct: 481 PRRA 464

[Close]
BLAST of CmoCh09G011870 vs. TrEMBL
Match: B9I949_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0014s10150g PE=4 SV=2)

HSP 1 Score: 624.8 bits (1610), Expect = 8.9e-176
Identity = 291/406 (71.67%), Postives = 353/406 (86.95%), Query Frame = 1 

Query: 70  IGSPCRVQKLIASQSDPLLAKEIFDYACRQPHFRPSSSSFLVLILKLGRSKYFSLIDDLL 129
           IGSP RVQKLIASQSDPLLAKEIFDYA RQP+F+ S SS+L+LILKLGR+KYFS IDDLL
Sbjct: 64  IGSPSRVQKLIASQSDPLLAKEIFDYASRQPNFQHSYSSYLILILKLGRAKYFSFIDDLL 123

Query: 130 LSFKSRGYPLSPTVFSYIIKIYGEADLPDKALKTFYTMIEFGCTPSSKQLNRILEILVSH 189
              KS+ YP++ T+FSYII IYG+A+LPD+ALK FYT+++F C PS K LN ILEILVSH
Sbjct: 124 TDLKSKNYPVTQTLFSYIINIYGKANLPDEALKIFYTILKFDCNPSPKHLNGILEILVSH 183

Query: 190 RNFIRPAFDLFKNARHHGVLPNTKSYNILMRVFCWNGDLSIAYTLFNKMFKRDVVPDVES 249
            N+I+PAFDLFK+A  + V PNTKSYNIL+R FC NG +S+AY+LFN+MFKRDV+PDVES
Sbjct: 184 HNYIKPAFDLFKDAHTYDVFPNTKSYNILIRAFCLNGQISMAYSLFNQMFKRDVMPDVES 243

Query: 250 YRILMQGLCRKNQVIGAVDLLEDMLNKGYVPDTLSYATLLNSLCRKKKLREAYKLLCRMK 309
           YRILMQ LCRK+QV GAVDLLEDMLNKGYVPD LSY TLLNSLCRKKKLREAYKLLCRMK
Sbjct: 244 YRILMQALCRKSQVNGAVDLLEDMLNKGYVPDALSYTTLLNSLCRKKKLREAYKLLCRMK 303

Query: 310 VKGCNPDVAHYNTVITGFCREGRALDACKILEDMQSNRCLPNLVSYQSLTNGLCDQGMFE 369
           VKGCNPD+ HYNTVI GFCREGRA+DACK+LEDM+SN C+PNLVSY++L  GLCDQGMF+
Sbjct: 304 VKGCNPDIIHYNTVILGFCREGRAMDACKVLEDMESNGCMPNLVSYRTLVGGLCDQGMFD 363

Query: 370 LAKDYVEEMTLKGFCPHFSVIHTLVKGFINVGRIDDSCSVLEDMLKHGKAPHSETWEMII 429
            AK ++EEM +KGF PHF+V + L+KGF NVG+I+++C V+E++LKHG+APH+ETW M++
Sbjct: 364 EAKSHLEEMMMKGFSPHFAVSNALIKGFCNVGKIEEACGVVEELLKHGEAPHTETWVMMV 423

Query: 430 SGVCEVEDTVKLCEILEKILKKDVRRDTRIVEAGSGLGEYLIRKLQ 476
           S +CEV+D  ++ EIL+K+ K +++ DTRIVEAG GL EYLI++ Q
Sbjct: 424 SRICEVDDLQRIGEILDKVKKVELKGDTRIVEAGIGLEEYLIKRTQ 469

[Close]
BLAST of CmoCh09G011870 vs. TrEMBL
Match: A0A061DS01_THECC (Pentatricopeptide repeat-containing protein, mitochondrial OS=Theobroma cacao GN=TCM_005036 PE=4 SV=1)

HSP 1 Score: 619.4 bits (1596), Expect = 3.7e-174
Identity = 299/431 (69.37%), Postives = 359/431 (83.29%), Query Frame = 1 

Query: 53  SATNINHKHLEQQP---DFSIGSPCRVQKLIASQSDPLLAKEIFDYACRQPHFRPSSSSF 112
           S+++    H +Q P     +IGSP RV KLI++QSDPLLAKEIFDYA  Q  FR S SSF
Sbjct: 30  SSSSPGPPHKQQPPRTCTSAIGSPARVPKLISAQSDPLLAKEIFDYASNQLGFRHSYSSF 89

Query: 113 LVLILKLGRSKYFSLIDDLLLSFKSRGYPLSPTVFSYIIKIYGEADLPDKALKTFYTMIE 172
           LVLILKLGRSK+FSL+DDLL+  K+  YP++PT+FSY+IKIY EA+LP++ALKTFY M+E
Sbjct: 90  LVLILKLGRSKHFSLVDDLLIRLKTDRYPVTPTLFSYLIKIYAEANLPERALKTFYKMLE 149

Query: 173 FGCTPSSKQLNRILEILVSHRNFIRPAFDLFKNARHHGVLPNTKSYNILMRVFCWNGDLS 232
           F   P  K LNRILE+LVSHRNF+ PAFDLFKNA  HGVLPNTKSYNILM  FC NGDLS
Sbjct: 150 FNIKPLPKHLNRILELLVSHRNFLMPAFDLFKNAHKHGVLPNTKSYNILMGAFCLNGDLS 209

Query: 233 IAYTLFNKMFKRDVVPDVESYRILMQGLCRKNQVIGAVDLLEDMLNKGYVPDTLSYATLL 292
           +AY LFNKMF+RDVVPDVESYRILMQGLCRK+QV  AVDLLED+LNKG++PD+LSY TLL
Sbjct: 210 VAYKLFNKMFERDVVPDVESYRILMQGLCRKSQVNTAVDLLEDILNKGFIPDSLSYTTLL 269

Query: 293 NSLCRKKKLREAYKLLCRMKVKGCNPDVAHYNTVITGFCREGRALDACKILEDMQSNRCL 352
           NSLCRKKKLREAYKLLCRMKVKGCNPD+ HYNTVI GFCREGRALDA K+LEDM SN CL
Sbjct: 270 NSLCRKKKLREAYKLLCRMKVKGCNPDLVHYNTVILGFCREGRALDAVKVLEDMPSNGCL 329

Query: 353 PNLVSYQSLTNGLCDQGMFELAKDYVEEMTLKGFCPHFSVIHTLVKGFINVGRIDDSCSV 412
           PNLVSY++L  GLCDQGMF+ AK Y+EEM +KGF PHFSV HTLVKGF NVG+I+++  V
Sbjct: 330 PNLVSYRTLIGGLCDQGMFDEAKKYMEEMLIKGFSPHFSVSHTLVKGFCNVGKIEEAIGV 389

Query: 413 LEDMLKHGKAPHSETWEMIISGVCEVEDTVKLCEILEKILKKDVRRDTRIVEAGSGLGEY 472
             +MLK+G+ PH +TW +II  +CE  +T ++ EILE+++K +++RDTRIV+AG+GL +Y
Sbjct: 390 FGEMLKYGEVPHMDTWVLIIPRICEDYETERMGEILEEVMKVEIKRDTRIVDAGTGLEDY 449

Query: 473 LIRKLQASKSR 481
           LIRK+++   R
Sbjct: 450 LIRKIRSRSKR 460

[Close]
BLAST of CmoCh09G011870 vs. TAIR10
Match: AT4G01400.1 (AT4G01400.1 FUNCTIONS IN: molecular_function unknown)

HSP 1 Score: 344.0 bits (881), Expect = 1.5e-94
Identity = 170/318 (53.46%), Postives = 227/318 (71.38%), Query Frame = 1 

Query: 60  KHLEQQPDFSIGSPCRVQKLIASQSDPLLAKEIFDYACRQPHFRPSSSSFLVLILKLGRS 119
           K +   P   IGSP RVQKLIASQSDPLLAKEIFDYA +QP+FR S SS L+LILKLGR 
Sbjct: 38  KPIVSNPKSPIGSPTRVQKLIASQSDPLLAKEIFDYASQQPNFRHSRSSHLILILKLGRG 97

Query: 120 KYFSLIDDLLLSFKSRGYPLSPTVFSYIIKIYGEADLPDKALKTFYTMIEFGCTPSSKQL 179
           +YF+LIDD+L   +S GYPL+  +F+Y+IK+Y EA LP+K L TFY M+EF  TP  K L
Sbjct: 98  RYFNLIDDVLAKHRSSGYPLTGEIFTYLIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHL 157

Query: 180 NRILEILVSHRNFIRPAFDLFKNARHHGVLPNTKSYNILMRVFCWNGDLSIAYTLFNKMF 239
           NRIL++LVSHR +++ AF+LFK++R HGV+PNT+SYN+LM+ FC N DLSIAY LF KM 
Sbjct: 158 NRILDVLVSHRGYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKML 217

Query: 240 KRDVVPDVESYRILMQGLCRKNQVIGAVDLLEDMLNKGYVPDTLSYATLLNSLCRKKKLR 299
           +RDVVPDV+SY+IL+QG CRK QV GA++LL+DMLNKG+VPD     TL+  LC +    
Sbjct: 218 ERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPD----RTLIGGLCDQGMFD 277

Query: 300 EAYKLLCRMKVKGCNPDVAHYNTVITGFCREGRALDACKILEDMQSNRCLPNLVSYQSLT 359
           E  K L  M  KG +P  +  N ++ GFC  G+  +AC ++E +  N    +  +++ + 
Sbjct: 278 EGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGETLHSDTWEMVI 337

Query: 360 NGLCDQGMFELAKDYVEE 378
             +C++   E  K ++E+
Sbjct: 338 PLICNEDESEKIKLFLED 351

[Close]
BLAST of CmoCh09G011870 vs. TAIR10
Match: AT5G46100.1 (AT5G46100.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 207.2 bits (526), Expect = 2.2e-53
Identity = 113/372 (30.38%), Postives = 194/372 (52.15%), Query Frame = 1 

Query: 72  SPCRVQKLIASQSDPLLAKEIFDYACRQ--PHFRPSSSSFLVLILKLGRSKYFSLIDDLL 131
           +P +V KL+ ++ D   +  +FD A  +    +    SSF  ++L+L  +  F   +DL+
Sbjct: 15  TPSQVIKLMRAEKDVEKSMAVFDSATAEYANGYVHDQSSFGYMVLRLVSANKFKAAEDLI 74

Query: 132 LSFKSRGYPLSPTVFSYIIKIYGEADLPDKALKTFYTMIEFGCTPSSKQLNRILEILVSH 191
           +  K     +S  +   I + YG    P  +L+ F+ M +F C PS K    +L ILV  
Sbjct: 75  VRMKIENCVVSEDILLSICRGYGRVHRPFDSLRVFHKMKDFDCDPSQKAYVTVLAILVEE 134

Query: 192 RNFIRPAFDLFKNARHHGVLPNTKSYNILMRVFCWN-GDLSIAYTLFNKMFKRDVVPDVE 251
            N +  AF  +KN R  G+ P   S N+L++  C N G +     +F +M KR   PD  
Sbjct: 135 -NQLNLAFKFYKNMREIGLPPTVASLNVLIKALCRNDGTVDAGLKIFLEMPKRGCDPDSY 194

Query: 252 SYRILMQGLCRKNQVIGAVDLLEDMLNKGYVPDTLSYATLLNSLCRKKKLREAYKLLCRM 311
           +Y  L+ GLCR  ++  A  L  +M+ K   P  ++Y +L+N LC  K + EA + L  M
Sbjct: 195 TYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEM 254

Query: 312 KVKGCNPDVAHYNTVITGFCREGRALDACKILEDMQSNRCLPNLVSYQSLTNGLCDQGMF 371
           K KG  P+V  Y++++ G C++GR+L A ++ E M +  C PN+V+Y +L  GLC +   
Sbjct: 255 KSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKI 314

Query: 372 ELAKDYVEEMTLKGFCPHFSVIHTLVKGFINVGRIDDSCSVLEDMLKHGKAPHSETWEM- 431
           + A + ++ M L+G  P   +   ++ GF  + +  ++ + L++M+  G  P+  TW + 
Sbjct: 315 QEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFLDEMILGGITPNRLTWNIH 374

Query: 432 ------IISGVC 434
                 ++ G+C
Sbjct: 375 VKTSNEVVRGLC 385

[Close]
BLAST of CmoCh09G011870 vs. TAIR10
Match: AT5G39710.1 (AT5G39710.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 191.0 bits (484), Expect = 1.7e-48
Identity = 107/338 (31.66%), Postives = 180/338 (53.25%), Query Frame = 1 

Query: 120 KYFSLIDDLLLSFKSRGYPLSPTVFSYIIKIYGEADLPDKALKTFYTMIEFGCTPSSKQL 179
           +Y SL+   L       Y  S +VF  ++K Y    L DKAL   +     G  P     
Sbjct: 114 EYASLVFKSLQETYDLCYSTS-SVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSY 173

Query: 180 NRILEILVSHRNFIRPAFDLFKNARHHGVLPNTKSYNILMRVFCWNGDLSIAYTLFNKMF 239
           N +L+  +  +  I  A ++FK      V PN  +YNIL+R FC+ G++ +A TLF+KM 
Sbjct: 174 NAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKME 233

Query: 240 KRDVVPDVESYRILMQGLCRKNQVIGAVDLLEDMLNKGYVPDTLSYATLLNSLCRKKKLR 299
            +  +P+V +Y  L+ G C+  ++     LL  M  KG  P+ +SY  ++N LCR+ +++
Sbjct: 234 TKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMK 293

Query: 300 EAYKLLCRMKVKGCNPDVAHYNTVITGFCREGRALDACKILEDMQSNRCLPNLVSYQSLT 359
           E   +L  M  +G + D   YNT+I G+C+EG    A  +  +M  +   P++++Y SL 
Sbjct: 294 EVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLI 353

Query: 360 NGLCDQGMFELAKDYVEEMTLKGFCPHFSVIHTLVKGFINVGRIDDSCSVLEDMLKHGKA 419
           + +C  G    A +++++M ++G CP+     TLV GF   G ++++  VL +M  +G +
Sbjct: 354 HSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFS 413

Query: 420 PHSETWEMIISGVC---EVEDTVKLCE-ILEKILKKDV 454
           P   T+  +I+G C   ++ED + + E + EK L  DV
Sbjct: 414 PSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDV 450

[Close]
BLAST of CmoCh09G011870 vs. TAIR10
Match: AT4G20090.1 (AT4G20090.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 185.3 bits (469), Expect = 9.1e-47
Identity = 113/407 (27.76%), Postives = 207/407 (50.86%), Query Frame = 1 

Query: 48  ELKTLSATNINHK-HLEQQPDFSIGSPCRVQKLIASQSDPLLAKEIFDYACRQPHFRPSS 107
           E + LS+  +N   HL      S+ SP    +++ +  +  +++++F  A +   F+   
Sbjct: 19  ESRILSSNPVNFSIHLRFSSSVSV-SPNPSMEVVENPLEAPISEKMFKSAPKMGSFKLGD 78

Query: 108 SSFLVLILKLGRSKYFSLIDDLLLSFKSRGYPLSPTVFSYIIKIYGEADLPDKALKTFYT 167
           S+   +I     S  F  ++ LL   +     +    F  + + YG+A LPDKA+  F+ 
Sbjct: 79  STLSSMIESYANSGDFDSVEKLLSRIRLENRVIIERSFIVVFRAYGKAHLPDKAVDLFHR 138

Query: 168 MI-EFGCTPSSKQLNRILEILVSHRNFIRPA--FDLFKNARHH-GVLPNTKSYNILMRVF 227
           M+ EF C  S K  N +L ++++   + R    +D   N+  +  + PN  S+N++++  
Sbjct: 139 MVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLSFNLVIKAL 198

Query: 228 CWNGDLSIAYTLFNKMFKRDVVPDVESYRILMQGLCRKNQVIGAVDLLEDMLNKGYVPDT 287
           C    +  A  +F  M +R  +PD  +Y  LM GLC++ ++  AV LL++M ++G  P  
Sbjct: 199 CKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSP 258

Query: 288 LSYATLLNSLCRKKKLREAYKLLCRMKVKGCNPDVAHYNTVITGFCREGRALDACKILED 347
           + Y  L++ LC+K  L    KL+  M +KGC P+   YNT+I G C +G+   A  +LE 
Sbjct: 259 VIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLER 318

Query: 348 MQSNRCLPNLVSYQSLTNGLCDQGMFELAKDYVEEMTLKGFCPHFSVIHTLVKGFINVGR 407
           M S++C+PN V+Y +L NGL  Q     A   +  M  +G+  +  +   L+ G    G+
Sbjct: 319 MVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGK 378

Query: 408 IDDSCSVLEDMLKHGKAPHSETWEMIISGVCEVEDTVKLCEILEKIL 450
            +++ S+   M + G  P+   + +++ G+C      +  EIL +++
Sbjct: 379 AEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMI 424

[Close]
BLAST of CmoCh09G011870 vs. TAIR10
Match: AT1G07740.1 (AT1G07740.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 184.5 bits (467), Expect = 1.5e-46
Identity = 113/390 (28.97%), Postives = 197/390 (50.51%), Query Frame = 1 

Query: 85  DPLLAKEIFDYACRQPHFRPSSSSFLVLILKLGRSKYFSLIDDLLLSFKSRGYPLSPTVF 144
           DP  A  +F +  ++  FR    S+  LI KL +S+ F  +D +L   + R      ++F
Sbjct: 61  DPEEALSLF-HQYQEMGFRHDYPSYSSLIYKLAKSRNFDAVDQILRLVRYRNVRCRESLF 120

Query: 145 SYIIKIYGEADLPDKALKTFYTMIEFGCTPSSKQLNRILEILVSHRNFIRPAFDLFKNAR 204
             +I+ YG+A   DKA+  F+ +  F C  + + LN ++ +LV +   +  A   F  A+
Sbjct: 121 MGLIQHYGKAGSVDKAIDVFHKITSFDCVRTIQSLNTLINVLVDNGE-LEKAKSFFDGAK 180

Query: 205 HHGVLPNTKSYNILMRVFCWNGDLSIAYTLFNKMFKRDVVPDVESYRILMQGLCRKNQVI 264
              + PN+ S+NIL++ F    D   A  +F++M + +V P V +Y  L+  LCR + + 
Sbjct: 181 DMRLRPNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMG 240

Query: 265 GAVDLLEDMLNKGYVPDTLSYATLLNSLCRKKKLREAYKLLCRMKVKGCNPDVAHYNTVI 324
            A  LLEDM+ K   P+ +++  L+  LC K +  EA KL+  M+ +GC P + +Y  ++
Sbjct: 241 KAKSLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILM 300

Query: 325 TGFCREGRALDACKILEDMQSNRCLPNLVSYQSLTNGLCDQGMFELAKDYVEEMTLKGFC 384
           +   + GR  +A  +L +M+  R  P++V Y  L N LC +     A   + EM +KG  
Sbjct: 301 SDLGKRGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQMKGCK 360

Query: 385 PHFSVIHTLVKGFINVGRIDDSCSVLEDMLKHGKAPHSETWEMIISGVCEVEDTVKLCEI 444
           P+ +    ++ GF  +   D   +VL  ML     P   T+  +++G+ +  +    C +
Sbjct: 361 PNAATYRMMIDGFCRIEDFDSGLNVLNAMLASRHCPTPATFVCMVAGLIKGGNLDHACFV 420

Query: 445 LEKILKKDVRRDTRIVEAGSGLGEYLIRKL 475
           LE + KK+       +  GSG  + L+  L
Sbjct: 421 LEVMGKKN-------LSFGSGAWQNLLSDL 441

[Close]
BLAST of CmoCh09G011870 vs. NCBI nr
Match: gi|659126255|ref|XP_008463091.1| (PREDICTED: pentatricopeptide repeat-containing protein At4g01400, mitochondrial-like [Cucumis melo])

HSP 1 Score: 877.5 bits (2266), Expect = 1.1e-251
Identity = 428/478 (89.54%), Postives = 449/478 (93.93%), Query Frame = 1 

Query: 4   HLLRPCNYKTLETVAVHLAPKTPLLHNSISSSSSLYQPDLNVHNELKTLSATNINHKHLE 63
           HLLRP NY+T+ETVA H+A   PLLHN ISSSSSLYQP LNVHNE KTL  TNINHK  E
Sbjct: 4   HLLRPGNYRTIETVAAHVARNAPLLHNLISSSSSLYQPHLNVHNESKTL-ITNINHKQCE 63

Query: 64  QQPDFSIGSPCRVQKLIASQSDPLLAKEIFDYACRQPHFRPSSSSFLVLILKLGRSKYFS 123
            QPDFSIGSPCRVQKLIASQSDPLLAKEIFDYACRQPHFRPSSSS LVLILKLGRSKYFS
Sbjct: 64  DQPDFSIGSPCRVQKLIASQSDPLLAKEIFDYACRQPHFRPSSSSLLVLILKLGRSKYFS 123

Query: 124 LIDDLLLSFKSRGYPLSPTVFSYIIKIYGEADLPDKALKTFYTMIEFGCTPSSKQLNRIL 183
           LIDDLLLSFKSRGYP++PT FSYIIKIYGEADLPDKALK FYTMIEFGCTPSSKQLNRIL
Sbjct: 124 LIDDLLLSFKSRGYPVTPTAFSYIIKIYGEADLPDKALKVFYTMIEFGCTPSSKQLNRIL 183

Query: 184 EILVSHRNFIRPAFDLFKNARHHGVLPNTKSYNILMRVFCWNGDLSIAYTLFNKMFKRDV 243
           EILVSHRNFIRPAFDLFKNARHHGVLPNTKSYNIL+R FCWNG++SIAY LFNKMF+ DV
Sbjct: 184 EILVSHRNFIRPAFDLFKNARHHGVLPNTKSYNILIRAFCWNGNISIAYKLFNKMFEGDV 243

Query: 244 VPDVESYRILMQGLCRKNQVIGAVDLLEDMLNKGYVPDTLSYATLLNSLCRKKKLREAYK 303
           +PDVE+YR LMQGLCRKNQV GAVDLLEDMLNKGY+PDTLSYATLLNSLCRKKKL+EAYK
Sbjct: 244 IPDVETYRTLMQGLCRKNQVNGAVDLLEDMLNKGYIPDTLSYATLLNSLCRKKKLKEAYK 303

Query: 304 LLCRMKVKGCNPDVAHYNTVITGFCREGRALDACKILEDMQSNRCLPNLVSYQSLTNGLC 363
           LLCRMKVKGCNPD+AHYNTVI GFCREGRALDACKILEDMQSN CLPNLVSY+SLTNGLC
Sbjct: 304 LLCRMKVKGCNPDIAHYNTVIMGFCREGRALDACKILEDMQSNGCLPNLVSYESLTNGLC 363

Query: 364 DQGMFELAKDYVEEMTLKGFCPHFSVIHTLVKGFINVGRIDDSCSVLEDMLKHGKAPHSE 423
           DQGMFELAK YVEEMTLKGF PHFSVIH LVKGF NVGR+D+SCSVLE MLKHGKAPHS+
Sbjct: 364 DQGMFELAKGYVEEMTLKGFYPHFSVIHALVKGFHNVGRMDESCSVLEGMLKHGKAPHSD 423

Query: 424 TWEMIISGVCEVEDTVKLCEILEKILKKDVRRDTRIVEAGSGLGEYLIRKLQASKSRR 482
           TWE+IISG+CEVEDTVK CEILEKILKKDVRRDTRIVEAG+GLGEYLIRKLQASKSRR
Sbjct: 424 TWEIIISGICEVEDTVKFCEILEKILKKDVRRDTRIVEAGTGLGEYLIRKLQASKSRR 480

[Close]
BLAST of CmoCh09G011870 vs. NCBI nr
Match: gi|449441228|ref|XP_004138384.1| (PREDICTED: pentatricopeptide repeat-containing protein At4g01400, mitochondrial-like [Cucumis sativus])

HSP 1 Score: 860.9 bits (2223), Expect = 1.1e-246
Identity = 421/482 (87.34%), Postives = 448/482 (92.95%), Query Frame = 1 

Query: 1   MRQHLLRPCNYKTLETVAV-HLAPKTPLLHNSISSSSSLYQPDLNVHNELKTLSATNINH 60
           M QHLLRPCNY+T+ETVA  H+A K+PLL N ISSSSSLYQP LNVHNE K L  TN+ H
Sbjct: 1   MWQHLLRPCNYRTIETVAAAHVARKSPLLRNLISSSSSLYQPHLNVHNESKFL-ITNVKH 60

Query: 61  KHLEQQPDFSIGSPCRVQKLIASQSDPLLAKEIFDYACRQPHFRPSSSSFLVLILKLGRS 120
           +  E QPDFSIGSPCRVQKLIASQSDPLLAKEIFDYACRQPHFRPSSSS LVLILKLGRS
Sbjct: 61  EQCEDQPDFSIGSPCRVQKLIASQSDPLLAKEIFDYACRQPHFRPSSSSLLVLILKLGRS 120

Query: 121 KYFSLIDDLLLSFKSRGYPLSPTVFSYIIKIYGEADLPDKALKTFYTMIEFGCTPSSKQL 180
           KYFSLIDDLLLSFKSR YP++PT FSYIIKIYGEADLPDKALK FYTMI+FGCTPSSKQL
Sbjct: 121 KYFSLIDDLLLSFKSRRYPVTPTAFSYIIKIYGEADLPDKALKVFYTMIDFGCTPSSKQL 180

Query: 181 NRILEILVSHRNFIRPAFDLFKNARHHGVLPNTKSYNILMRVFCWNGDLSIAYTLFNKMF 240
           NRILEILVSHRNFIRPAFDLFKNARHHGVLPNTKSYNIL+R FCWNG++SIAYTLFNKMF
Sbjct: 181 NRILEILVSHRNFIRPAFDLFKNARHHGVLPNTKSYNILIRAFCWNGNISIAYTLFNKMF 240

Query: 241 KRDVVPDVESYRILMQGLCRKNQVIGAVDLLEDMLNKGYVPDTLSYATLLNSLCRKKKLR 300
           +R+V+PDVE+YR LMQGLCRKNQV GAVDLLEDMLNKGY+PDTLSYATLLNSLCRKKKLR
Sbjct: 241 ERNVIPDVETYRTLMQGLCRKNQVNGAVDLLEDMLNKGYIPDTLSYATLLNSLCRKKKLR 300

Query: 301 EAYKLLCRMKVKGCNPDVAHYNTVITGFCREGRALDACKILEDMQSNRCLPNLVSYQSLT 360
           EAYKLLCRMKVKGCNPD+AHYNTVI GFCREGRALDACKILEDMQSN CLPNLVSY+SLT
Sbjct: 301 EAYKLLCRMKVKGCNPDIAHYNTVIMGFCREGRALDACKILEDMQSNGCLPNLVSYESLT 360

Query: 361 NGLCDQGMFELAKDYVEEMTLKGFCPHFSVIHTLVKGFINVGRIDDSCSVLEDMLKHGKA 420
           NGLCDQGMFELAK YVEEMTLKGF PHFSVIH LVKGF ++GRI +SCSVLEDMLK GKA
Sbjct: 361 NGLCDQGMFELAKGYVEEMTLKGFYPHFSVIHALVKGFHSIGRIHESCSVLEDMLKRGKA 420

Query: 421 PHSETWEMIISGVCEVEDTVKLCEILEKILKKDVRRDTRIVEAGSGLGEYLIRKLQASKS 480
           PHS+TWE+IISG+CEVEDT K CE+ EKILKKDVRRDTRIVEAG+GLGEYLIRKLQAS S
Sbjct: 421 PHSDTWEIIISGICEVEDTAKFCEVWEKILKKDVRRDTRIVEAGTGLGEYLIRKLQASIS 480

Query: 481 RR 482
           RR
Sbjct: 481 RR 481

[Close]
BLAST of CmoCh09G011870 vs. NCBI nr
Match: gi|641867938|gb|KDO86622.1| (hypothetical protein CISIN_1g012126mg [Citrus sinensis])

HSP 1 Score: 639.4 bits (1648), Expect = 5.0e-180
Identity = 314/475 (66.11%), Postives = 382/475 (80.42%), Query Frame = 1 

Query: 6   LRPCNYKTLETVAVHLAPKTPLLHNSISSSSSLYQPDLNVHNELKTLSATNINHKHLEQQ 65
           LR     T  T AV   PKTP L    SSSS   Q   +   + +  S +N       + 
Sbjct: 7   LRSSKIVTTVTGAVTFPPKTPSLIFCYSSSS---QESPSSPEQQQESSISN------SKS 66

Query: 66  PDFSIGSPCRVQKLIASQSDPLLAKEIFDYACRQPHFRPSSSSFLVLILKLGRSKYFSLI 125
           P   IGSPCRVQKLIASQSDPLLAKEIFDYA RQP+FR S+S++L+LILKLGR+KYFSLI
Sbjct: 67  P---IGSPCRVQKLIASQSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLI 126

Query: 126 DDLLLSFKSRGYPLSPTVFSYIIKIYGEADLPDKALKTFYTMIEFGCTPSSKQLNRILEI 185
           DD+L++ KS  YP++P++F+Y+IKIY E++LPD+ALKTF +M+EF C P  KQLNRILE+
Sbjct: 127 DDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILEL 186

Query: 186 LVSHRNFIRPAFDLFKNARHHGVLPNTKSYNILMRVFCWNGDLSIAYTLFNKMFKRDVVP 245
           LV+HRN++RPAFDLFK+A  HGVLPNTKSYNI+MR FC+NGD+SIAYTLFNKMF+R V+P
Sbjct: 187 LVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMP 246

Query: 246 DVESYRILMQGLCRKNQVIGAVDLLEDMLNKGYVPDTLSYATLLNSLCRKKKLREAYKLL 305
           DVESYRILMQGLCRK+QV  AVDLLEDMLNKG+VPDTLSY TLLNSLCRKKKLREAYKLL
Sbjct: 247 DVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLL 306

Query: 306 CRMKVKGCNPDVAHYNTVITGFCREGRALDACKILEDMQSNRCLPNLVSYQSLTNGLCDQ 365
           CRMKVKGCNPD+ HYNTV+ GFCREGRA+DACK+LEDM SN CLPNLVSY++L  GLCDQ
Sbjct: 307 CRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQ 366

Query: 366 GMFELAKDYVEEMTLKGFCPHFSVIHTLVKGFINVGRIDDSCSVLEDMLKHGKAPHSETW 425
           GMF++AK Y++ M  KGF PHFSV H L+KGF NVG++D++C VLE++LK G+APH +TW
Sbjct: 367 GMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTW 426

Query: 426 EMIISGVCEVEDTVKLCEILEKILKKDVRRDTRIVEAGSGLGEYLIRKLQASKSR 481
            MI+  +C  E+  KL E+L +I+K +++ DTRIVEAG GL +YLI K ++   R
Sbjct: 427 VMIVPQICAGEEMEKLGEVLNEIVKVEIKGDTRIVEAGIGLEDYLIGKTRSRPRR 469

[Close]
BLAST of CmoCh09G011870 vs. NCBI nr
Match: gi|658052407|ref|XP_008361935.1| (PREDICTED: pentatricopeptide repeat-containing protein At4g01400, mitochondrial-like [Malus domestica])

HSP 1 Score: 628.6 bits (1620), Expect = 8.8e-177
Identity = 312/479 (65.14%), Postives = 371/479 (77.45%), Query Frame = 1 

Query: 4   HLLRPCNYKTLETVAVHLA--PKTPLLHNSISSSSSLYQPDLNVHNELKTLSATNINHKH 63
           HLL   + KT  T   +LA  PKTP      SSSSS +      H               
Sbjct: 2   HLLFRRSAKTAXTATRYLALPPKTP------SSSSSFFHSSQPRH--------------- 61

Query: 64  LEQQPDFSIGSPCRVQKLIASQSDPLLAKEIFDYACRQPHFRPSSSSFLVLILKLGRSKY 123
             Q PD  IGSP RVQKLIASQSDPLLAKEIFDYA R P+FR S +S+  +ILKLGRSKY
Sbjct: 62  --QTPD--IGSPSRVQKLIASQSDPLLAKEIFDYAARHPNFRHSYASYFTIILKLGRSKY 121

Query: 124 FSLIDDLLLSFKSRGYPLSPTVFSYIIKIYGEADLPDKALKTFYTMIEFGCTPSSKQLNR 183
           FSL+DDLLL FKS+ Y +SP +FS++IKIYGEA+LP KAL+ FYTM+EF C PS K LNR
Sbjct: 122 FSLVDDLLLXFKSQNYTVSPALFSHLIKIYGEANLPQKALRVFYTMMEFDCRPSVKHLNR 181

Query: 184 ILEILVSHRNFIRPAFDLFKNARHHGVLPNTKSYNILMRVFCWNGDLSIAYTLFNKMFKR 243
           IL+ILVSHRNF+RPAFD+FK+A  HGV+PNT+SYNILMR FC NGD+SIAY LFNKMF+R
Sbjct: 182 ILQILVSHRNFLRPAFDVFKDAHRHGVMPNTESYNILMRAFCLNGDISIAYQLFNKMFER 241

Query: 244 DVVPDVESYRILMQGLCRKNQVIGAVDLLEDMLNKGYVPDTLSYATLLNSLCRKKKLREA 303
           D+VPDV SYRILMQGLCRK QV  AVD LEDMLNKG+VPDTLSY TLLNSLCRKK+LREA
Sbjct: 242 DLVPDVHSYRILMQGLCRKGQVNTAVDFLEDMLNKGFVPDTLSYTTLLNSLCRKKQLREA 301

Query: 304 YKLLCRMKVKGCNPDVAHYNTVITGFCREGRALDACKILEDMQSNRCLPNLVSYQSLTNG 363
           YKLLCRMKVKGCNPD+ HYNTVI G CREGR  DACK+LEDM SN CLPNLVSY++L +G
Sbjct: 302 YKLLCRMKVKGCNPDIVHYNTVILGLCREGRPADACKVLEDMASNGCLPNLVSYRTLVSG 361

Query: 364 LCDQGMFELAKDYVEEMTLKGFCPHFSVIHTLVKGFINVGRIDDSCSVLEDMLKHGKAPH 423
           LCD GM + AK Y+E M  KGF PHFSVIH LVKGF NVGR++++C VLE++LKHG+ PH
Sbjct: 362 LCDHGMLDEAKSYMETMVSKGFSPHFSVIHALVKGFCNVGRVEEACGVLEEVLKHGEVPH 421

Query: 424 SETWEMIISGVCEVEDTVKLCEILEKILKKDVRRDTRIVEAGSGLGEYLIRKLQASKSR 481
           ++TW  ++ G+CE  + V++ E+L +++K ++R +TRIVEA  GL +YLI+K+QA   R
Sbjct: 422 TDTWITVVPGICEEIELVRMEEMLREVMKVEIRPNTRIVEAAFGLEDYLIKKIQAXPRR 455

[Close]
BLAST of CmoCh09G011870 vs. NCBI nr
Match: gi|985467008|ref|XP_015389684.1| (PREDICTED: conserved oligomeric Golgi complex subunit 4 [Citrus sinensis])

HSP 1 Score: 628.2 bits (1619), Expect = 1.1e-176
Identity = 307/458 (67.03%), Postives = 372/458 (81.22%), Query Frame = 1 

Query: 6   LRPCNYKTLETVAVHLAPKTPLLHNSISSSSSLYQPDLNVHNELKTLSATNINHKHLEQQ 65
           LR     T  T AV   PKTP L    SSSS   Q   +   + +  S +N       + 
Sbjct: 7   LRSSKIVTTVTGAVTFPPKTPSLIFCYSSSS---QESPSSPEQQQESSISN------SKS 66

Query: 66  PDFSIGSPCRVQKLIASQSDPLLAKEIFDYACRQPHFRPSSSSFLVLILKLGRSKYFSLI 125
           P   IGSPCRVQKLIASQSDPLLAKEIFDYA RQP+FR S+S++L+LILKLGR+KYFSLI
Sbjct: 67  P---IGSPCRVQKLIASQSDPLLAKEIFDYASRQPNFRHSNSTYLILILKLGRAKYFSLI 126

Query: 126 DDLLLSFKSRGYPLSPTVFSYIIKIYGEADLPDKALKTFYTMIEFGCTPSSKQLNRILEI 185
           DD+L++ KS  YP++P++F+Y+IKIY E++LPD+ALKTF +M+EF C P  KQLNRILE+
Sbjct: 127 DDILITLKSEHYPVTPSLFTYLIKIYAESNLPDRALKTFRSMLEFNCKPLPKQLNRILEL 186

Query: 186 LVSHRNFIRPAFDLFKNARHHGVLPNTKSYNILMRVFCWNGDLSIAYTLFNKMFKRDVVP 245
           LV+HRN++RPAFDLFK+A  HGVLPNTKSYNI+MR FC+NGD+SIAYTLFNKMF+R V+P
Sbjct: 187 LVTHRNYLRPAFDLFKSAHKHGVLPNTKSYNIMMRAFCFNGDISIAYTLFNKMFERGVMP 246

Query: 246 DVESYRILMQGLCRKNQVIGAVDLLEDMLNKGYVPDTLSYATLLNSLCRKKKLREAYKLL 305
           DVESYRILMQGLCRK+QV  AVDLLEDMLNKG+VPDTLSY TLLNSLCRKKKLREAYKLL
Sbjct: 247 DVESYRILMQGLCRKSQVNRAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLREAYKLL 306

Query: 306 CRMKVKGCNPDVAHYNTVITGFCREGRALDACKILEDMQSNRCLPNLVSYQSLTNGLCDQ 365
           CRMKVKGCNPD+ HYNTV+ GFCREGRA+DACK+LEDM SN CLPNLVSY++L  GLCDQ
Sbjct: 307 CRMKVKGCNPDIVHYNTVVLGFCREGRAIDACKVLEDMPSNGCLPNLVSYRTLVGGLCDQ 366

Query: 366 GMFELAKDYVEEMTLKGFCPHFSVIHTLVKGFINVGRIDDSCSVLEDMLKHGKAPHSETW 425
           GMF++AK Y++ M  KGF PHFSV H L+KGF NVG++D++C VLE++LK G+APH +TW
Sbjct: 367 GMFDVAKKYMQLMISKGFSPHFSVSHALIKGFCNVGKVDEACGVLEELLKAGEAPHEDTW 426

Query: 426 EMIISGVCEVEDTVKLCEILEKILKKDVRRDTRIVEAG 464
            MI+  +C  E+  KL E+L +I+K +++ DTRIVEAG
Sbjct: 427 VMIVPQICAGEEMEKLGEVLNEIVKVEIKGDTRIVEAG 452

The following BLAST results are available for this feature:
BLAST of CmoCh09G011870 vs. Swiss-Prot
Match NameE-valueIdentityDescription
PP298_ARATH1.6e-15762.29Pentatricopeptide repeat-containing protein At4g01400, mitochondrial OS=Arabidop... [more]
PP418_ARATH4.0e-5230.38Pentatricopeptide repeat-containing protein At5g46100 OS=Arabidopsis thaliana GN... [more]
PP407_ARATH2.9e-4731.66Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana GN... [more]
PP327_ARATH1.6e-4527.76Pentatricopeptide repeat-containing protein At4g20090 OS=Arabidopsis thaliana GN... [more]
PPR20_ARATH2.7e-4528.97Pentatricopeptide repeat-containing protein At1g07740, mitochondrial OS=Arabidop... [more]
BLAST of CmoCh09G011870 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K8U0_CUCSA7.3e-24787.34Uncharacterized protein OS=Cucumis sativus GN=Csa_6G014780 PE=4 SV=1[more]
A0A067HF57_CITSI3.5e-18066.11Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g012126mg PE=4 SV=1[more]
M5XNI8_PRUPE1.4e-17665.08Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa021922mg PE=4 SV=1[more]
B9I949_POPTR8.9e-17671.67Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0014s10150g PE=4 SV=2[more]
A0A061DS01_THECC3.7e-17469.37Pentatricopeptide repeat-containing protein, mitochondrial OS=Theobroma cacao GN... [more]
BLAST of CmoCh09G011870 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G01400.11.5e-9453.46 FUNCTIONS IN: molecular_function unknown[more]
AT5G46100.12.2e-5330.38 Pentatricopeptide repeat (PPR) superfamily protein[more]
AT5G39710.11.7e-4831.66 Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT4G20090.19.1e-4727.76 Pentatricopeptide repeat (PPR) superfamily protein[more]
AT1G07740.11.5e-4628.97 Tetratricopeptide repeat (TPR)-like superfamily protein[more]
BLAST of CmoCh09G011870 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659126255|ref|XP_008463091.1|1.1e-25189.54PREDICTED: pentatricopeptide repeat-containing protein At4g01400, mitochondrial-... [more]
gi|449441228|ref|XP_004138384.1|1.1e-24687.34PREDICTED: pentatricopeptide repeat-containing protein At4g01400, mitochondrial-... [more]
gi|641867938|gb|KDO86622.1|5.0e-18066.11hypothetical protein CISIN_1g012126mg [Citrus sinensis][more]
gi|658052407|ref|XP_008361935.1|8.8e-17765.14PREDICTED: pentatricopeptide repeat-containing protein At4g01400, mitochondrial-... [more]
gi|985467008|ref|XP_015389684.1|1.1e-17667.03PREDICTED: conserved oligomeric Golgi complex subunit 4 [Citrus sinensis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR002885Pentatricopeptide_repeat
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0048193 Golgi vesicle transport
cellular_component GO:0005575 cellular_component
cellular_component GO:0005783 endoplasmic reticulum
molecular_function GO:0003674 molecular_function
molecular_function GO:0005515 protein binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh09G011870.1CmoCh09G011870.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 143..172
score: 0.013coord: 392..417
score:
IPR002885Pentatricopeptide repeatPFAMPF12854PPR_1coord: 276..309
score: 7.
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 315..364
score: 3.2E-14coord: 210..259
score: 1.2
IPR002885Pentatricopeptide repeatTIGRFAMsTIGR00756TIGR00756coord: 284..317
score: 1.7E-8coord: 353..385
score: 1.8E-5coord: 143..175
score: 2.0E-4coord: 320..351
score: 1.2E-8coord: 214..247
score: 7.2E-6coord: 249..282
score: 8.
IPR002885Pentatricopeptide repeatPROFILEPS51375PPRcoord: 421..455
score: 6.686coord: 386..420
score: 8.638coord: 351..385
score: 10.742coord: 316..350
score: 11.838coord: 105..139
score: 5.393coord: 281..315
score: 12.233coord: 211..245
score: 11.181coord: 175..210
score: 6.489coord: 140..174
score: 9.372coord: 246..280
score: 11
NoneNo IPR availablePANTHERPTHR24015FAMILY NOT NAMEDcoord: 22..462
score: 2.7E
NoneNo IPR availablePANTHERPTHR24015:SF501SUBFAMILY NOT NAMEDcoord: 22..462
score: 2.7E