CmoCh09G011810 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh09G011810
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Protein disulfide-isomerase erp38
Location	Cmo_Chr09 : 8373415 .. 8376361 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CGTATAGCCAAAACAGACGACAAAATTCCTCTATCGACATTGTAGGAGCGAGCACACAGAGCTTCACATGGCAGCCTCCATTTCAACATCACCTTATCCTCTCCTCACCTCAGAGCGCTCCAATCGCTTCGCCGTGAATGATTCATCTTCATCTAGATTGTTTTTCTCCTCGTCTCTACAGCTACCGGTTCAGCTTCGATGTGTTCGACTTGGAAACTGTGGGATTTCTGCTCCGTCGCGGTCTCGAATCTTCCCTGTGGTAATAATCTATTTCCTTAGATCTGTGTTTTGTTTTTATGGAGGAACCTGACAAAGAATTTGGAATCCTTGGACTTTGCTTTTGTTCTTATTGTTGATTTTGTTTCGCATCTAACCTTCAGCGACTTATCGTTAATTTTTGTGCCTAATTCTGGTGAACGAAGTTTATGTGATGTAATTGTTTTTCTTATACTTCTGGTGTTCCTTTAATTCGATTTTTGATTGTATCCGCTTCCGGTTTACGTAGAACTAGAAATACATTGTTCGTTGTTGGCTCACCTAGTTGCAAATTAGGACTCTACCTAAGAAGAAACTATAATCTGTCTGGTTCTATTAGTTTTATAAGAGAAATTAAGTTCTTAAGTAGTTGTCCTTACAAGTTCACTCAGAGATTAGAAGGATTGCATTCCCCTTTTTGTAGAGATTTTTTCTTGCTCTTAAAAGCTGCATTAATAGTTTTCTCGATTCTCAAGTAGCTTGTTTAAATATGGATGCCAATTTGTGTTCAAGCTGCTGTAATGAATAACGATGGGATTTGTTTGTACAAATTAACTTCTGTAGGTCAAAGCCAAGAACCAAACATTTTCTTCCTTTGATGATTTATTGGCCAACTCTGACAAGCCCGTGTTAGTGGACTTCTACGCAACCTGGTTGGTCTCTTTATCTCACTCACATGCACACACCTATTTTCAAGCTTCTCTTTCTACAAGAGCATTGCAGGCATGGCTTTAAATCTCACCCCACTTCACTGGTGGATGATTGTTGAGAGAGTCCAACGTTGGTTAATTTATGGAATGATTATGGATTTTTTAAGTAAGGAATACATCTCTATTGTTATGAGGCCTTTTGGAAAAGCCCAAAGCAATGCCATGAGAGCTTATGCTCAAAGTGGACAATATTATACCATTGTGAGAGTTGTGGTTCCTAACCGATAATATTAATTTGTGGGAATCATGTTTTTAATATATAATTTCAAAATAAGCCGTTGTTTCTCCTGAGCAATTTTACCTATTGAATATGATTCAGTTAGCAAGTTAGTGCTTGGCTGCTGAGGAGAACAGGGGTTGAATTGTAGAACAGATAATTTTGTTATTCAAAAAGGTAGTTTTTAAATGATGGGTAAACATAGCTGATATGAACTAGGAGATTCATCTTGAGTGTGACATGAATTGAAATAGCTTTGGATAATTTCAACAACATTTTCTTCACATCTTTATTGAAGTATATCGGATGATTGATGTCTTTTGGTTCATATCAATAGTTCCTCGTTTGCAGGTGTGGTCCTTGTCAGTTTATGGTTCCAATTCTTGAAAAAGTTAGTGATGCGCTGAGTGACACAGTCCAGGTGGTCAAGATTGACACTGAGAAATATCCTGTCATTGCTGATAAATACAAAATAGAGGCATTACCTACGTTTATCCTTTTCAAAGATGGAAAACCCCTTGACCGATTCGTAAGTGAATGCTTTATCCTATTTCTTGTCATTTGGAGAGATATTGAATGTACAACCAACTCTAGATGCGTCAAGAAATCACATATATGTTTCAGAATCTTTATTCAATTGCATCTTTTTTCTTTCTGAATTTGAACGAAAACGGGCAGTTTTTCCAAGAAATCCTGTAATTACACTCGAAGTTTCTACTATGTTCTATCCTTTATTTCTCTGAAACCATTATCGACTGTATCTTTCCTCAATTCATGCACCCAGTTTAATTTCAAAGAGTTCGAAGGTATGCCCATATTTTCAATTTGCTCACTTTTAACATATTATCATGGTTGGATTTGATCCACGATCAAAATATGTCGCAACAAGTAAAAGAAGCGAAGGAAAAACTTGGAGGGGAGAGATCTTTTGGAACAAAAAAAACCTTAAGCACTTAGCTTTTCAATTTTGTTTGTTGTTGTAGTGGTGAAAAGAGCATATATCTCAGGAATATTTATAGTAGAGAAAGCACTTACTAGTGTCCTAAACTTTCTCCTCAAGTTAAGAACCACTAACAATCTTCCGAATTAAAGCACAAAACTTGGTTCACAATTTGAGGGGAGAGATCTTTTGGAACAAAAAAACCTTAACCACTTAGCTTTTCAATTTTGTTTGTTGTTGTAGTTGTGAAAAGAGCATATATCTCAGGAATATTTATAGTAGAGAAAGCACTTACTAGTGTCCTAAACTTTCTCCTCAAGTTAAGAACCACTAACAATCTTCCGAATTAAAGCACAAAACTTGGTTCACAATTTGAGGGGAGAGATCTTTTGGAACAAAAAAACCTTAACCACTTAGCTTTTCAATTTTGTTTGTTGTTGTAGTTGTGAAAAGAGCATATATCTCAGGAATATTTATAGTAGAGAAAGCACTTACTAGTGTCCTAAACTTTCTCCTCAAGTTAAGAACCACTAACAATCTTCCGAATTAAAGCACAAAACTTGGTTCACAATTTGACAACTACTACCGATAGACTATAACTCTTTCACCTTTTCTTTTGGTTTTAGTGAGATTCCATAAACAATCTTGTAACTTTTTTAGACATTCCGGTTGAAATGTCAGTTAAACGGACTTTCAGTTTCTTGTGCTTAGATTATTTATTGTTTATTTTAAACATGCATGCGAATTATCGATATGCAGGAAGGAGCTGTAGCTGCGGGTGAACTCATTCAACGCATTGAAAATTCCCTGAAGATTAAGCAATAA

mRNA sequence

CGTATAGCCAAAACAGACGACAAAATTCCTCTATCGACATTGTAGGAGCGAGCACACAGAGCTTCACATGGCAGCCTCCATTTCAACATCACCTTATCCTCTCCTCACCTCAGAGCGCTCCAATCGCTTCGCCGTGAATGATTCATCTTCATCTAGATTGTTTTTCTCCTCGTCTCTACAGCTACCGGTTCAGCTTCGATGTGTTCGACTTGGAAACTGTGGGATTTCTGCTCCGTCGCGGTCTCGAATCTTCCCTGTGGTCAAAGCCAAGAACCAAACATTTTCTTCCTTTGATGATTTATTGGCCAACTCTGACAAGCCCGTGTTAGTGGACTTCTACGCAACCTGGTGTGGTCCTTGTCAGTTTATGGTTCCAATTCTTGAAAAAGTTAGTGATGCGCTGAGTGACACAGTCCAGGTGGTCAAGATTGACACTGAGAAATATCCTGTCATTGCTGATAAATACAAAATAGAGGCATTACCTACGTTTATCCTTTTCAAAGATGGAAAACCCCTTGACCGATTCGAAGGAGCTGTAGCTGCGGGTGAACTCATTCAACGCATTGAAAATTCCCTGAAGATTAAGCAATAA

Coding sequence (CDS)

ATGGCAGCCTCCATTTCAACATCACCTTATCCTCTCCTCACCTCAGAGCGCTCCAATCGCTTCGCCGTGAATGATTCATCTTCATCTAGATTGTTTTTCTCCTCGTCTCTACAGCTACCGGTTCAGCTTCGATGTGTTCGACTTGGAAACTGTGGGATTTCTGCTCCGTCGCGGTCTCGAATCTTCCCTGTGGTCAAAGCCAAGAACCAAACATTTTCTTCCTTTGATGATTTATTGGCCAACTCTGACAAGCCCGTGTTAGTGGACTTCTACGCAACCTGGTGTGGTCCTTGTCAGTTTATGGTTCCAATTCTTGAAAAAGTTAGTGATGCGCTGAGTGACACAGTCCAGGTGGTCAAGATTGACACTGAGAAATATCCTGTCATTGCTGATAAATACAAAATAGAGGCATTACCTACGTTTATCCTTTTCAAAGATGGAAAACCCCTTGACCGATTCGAAGGAGCTGTAGCTGCGGGTGAACTCATTCAACGCATTGAAAATTCCCTGAAGATTAAGCAATAA

Homology

[Close]

BLAST of CmoCh09G011810 vs. Swiss-Prot
Match: TRXY1_ARATH (Thioredoxin Y1, chloroplastic OS=Arabidopsis thaliana GN=At1g76760 PE=2 SV=1)

HSP 1 Score: 191.4 bits (485), Expect = 8.1e-48
Identity = 105/172 (61.05%), Postives = 128/172 (74.42%), Query Frame = 1


Query: 4   SISTSPYPLLTSERSNRFAVNDSSSSRLFFSSSLQLPVQLRCVRLGNCGI-SAPSRSRIF 63
           S+S+S  P L S+ S+  +   + +SR   +   Q PV  R VR G+    S  S +R  
Sbjct: 5   SLSSSTVPSLNSKESSGVS---AFASRSISAVKFQFPV--RRVRTGDLKFPSLSSTTRCT 64

Query: 64  PV-VKAKNQTFSSFDDLLANSDKPVLVDFYATWCGPCQFMVPILEKVSDALSDTVQVVKI 123
           P  ++AK QTF SF+DLL NSDKPVLVD+YATWCGPCQFMVPIL +VS+ L D +QVVKI
Sbjct: 65  PRRIEAKKQTFDSFEDLLVNSDKPVLVDYYATWCGPCQFMVPILNEVSETLKDKIQVVKI 124

Query: 124 DTEKYPVIADKYKIEALPTFILFKDGKPLDRFEGAVAAGELIQRIENSLKIK 174
           DTEKYP IA+KYKIEALPTFILFKDG+P DRFEGA+ A +LIQRIE+SLK+K
Sbjct: 125 DTEKYPSIANKYKIEALPTFILFKDGEPCDRFEGALTAKQLIQRIEDSLKVK 171

[Close]

BLAST of CmoCh09G011810 vs. Swiss-Prot
Match: TRXY2_ARATH (Thioredoxin Y2, chloroplastic OS=Arabidopsis thaliana GN=At1g43560 PE=2 SV=1)

HSP 1 Score: 187.6 bits (475), Expect = 1.2e-46
Identity = 107/178 (60.11%), Postives = 130/178 (73.03%), Query Frame = 1


Query: 1   MAASISTSPY-PLLTSERSNRFAVNDSSSSRLFFSSSLQLPVQLRCVRLGNCGISAPSRS 60
           MA S++T+   P  T E SN      +S SR    SS++LP Q+R  R G+  + +PS S
Sbjct: 1   MAISLATAYISPCFTPESSN-----SASPSRTL--SSVRLPSQIR--RFGS--VQSPSSS 60

Query: 61  RIFP---VVKAKNQTFSSFDDLLANSDKPVLVDFYATWCGPCQFMVPILEKVSDALSDTV 120
             F    V  AK QTF+SFDDLL NSDKPVLVDFYATWCGPCQ MVPIL +VS+ L D +
Sbjct: 61  TRFAPLTVRAAKKQTFNSFDDLLQNSDKPVLVDFYATWCGPCQLMVPILNEVSETLKDII 120

Query: 121 QVVKIDTEKYPVIADKYKIEALPTFILFKDGKPLDRFEGAVAAGELIQRIENSLKIKQ 175
            VVKIDTEKYP +A+KY+IEALPTFILFKDGK  DRFEGA+ A +L++RIENSL++KQ
Sbjct: 121 AVVKIDTEKYPSLANKYQIEALPTFILFKDGKLWDRFEGALPANQLVERIENSLQVKQ 167

[Close]

BLAST of CmoCh09G011810 vs. Swiss-Prot
Match: TRXY_ORYSJ (Thioredoxin Y, chloroplastic OS=Oryza sativa subsp. japonica GN=Os01g0963400 PE=3 SV=2)

HSP 1 Score: 170.2 bits (430), Expect = 1.9e-41
Identity = 80/119 (67.23%), Postives = 101/119 (84.87%), Query Frame = 1


Query: 54  SAPSRSRIFPVVKAKNQTFSSFDDLLANSDKPVLVDFYATWCGPCQFMVPILEKVSDALS 113
           +APSR      V+AK QTFSSFD+LL  S+KPVLVDFYATWCGPCQ+MVPIL++VS+ L 
Sbjct: 48  AAPSRRGATLRVQAKKQTFSSFDELLEKSEKPVLVDFYATWCGPCQYMVPILQEVSEKLG 107

Query: 114 DTVQVVKIDTEKYPVIADKYKIEALPTFILFKDGKPLDRFEGAVAAGELIQRIENSLKI 173
           D +QVVKIDTEKY  IA++Y+IEALPTFI+FK+GKP  RFEGA+ A +LIQ+IE++L++
Sbjct: 108 DKIQVVKIDTEKYTSIANRYQIEALPTFIIFKNGKPCHRFEGALPANQLIQQIESALEV 166

[Close]

BLAST of CmoCh09G011810 vs. Swiss-Prot
Match: THIO1_SYNY3 (Thioredoxin-like protein slr0233 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=slr0233 PE=1 SV=1)

HSP 1 Score: 130.6 bits (327), Expect = 1.7e-29
Identity = 58/101 (57.43%), Postives = 77/101 (76.24%), Query Frame = 1


Query: 67  AKNQTFSSFDDLLANSDKPVLVDFYATWCGPCQFMVPILEKVSDALSDTVQVVKIDTEKY 126
           A  + F++F ++LA S KPVLVDFYATWCGPCQ M PILE+V   L   +QVVKIDT+KY
Sbjct: 2   AVKKQFANFAEMLAGSPKPVLVDFYATWCGPCQMMAPILEQVGSHLRQQIQVVKIDTDKY 61

Query: 127 PVIADKYKIEALPTFILFKDGKPLDRFEGAVAAGELIQRIE 168
           P IA +Y+I++LPT +LFK G+P+ R EG   A +LIQ+++
Sbjct: 62  PAIATQYQIQSLPTLVLFKQGQPVHRMEGVQQAAQLIQQLQ 102

[Close]

BLAST of CmoCh09G011810 vs. Swiss-Prot
Match: THIO_RICBR (Thioredoxin OS=Rickettsia bellii (strain RML369-C) GN=trxA PE=3 SV=2)

HSP 1 Score: 92.8 bits (229), Expect = 3.9e-18
Identity = 43/104 (41.35%), Postives = 66/104 (63.46%), Query Frame = 1


Query: 67  AKNQTFSSFDDLLANSDKPVLVDFYATWCGPCQFMVPILEKVSDALSDTVQVVKIDTEKY 126
           A N T  SF++ +  SD PVLVDF+A WC PC+ + PI+E++S  L   V+V+K++ ++ 
Sbjct: 2   ASNVTDKSFEEEVLKSDLPVLVDFWAEWCSPCRMLTPIIEEISKDLESKVKVLKMNIDEN 61

Query: 127 PVIADKYKIEALPTFILFKDGKPLDRFEGAVAAGELIQRIENSL 171
           P I  KY I ++PT +LFK+G+  D   G      LI+ I N++
Sbjct: 62  PEIPSKYGIRSIPTVMLFKNGEQKDTKVGLHQKNSLIEWINNNI 105

[Close]

BLAST of CmoCh09G011810 vs. TrEMBL
Match: A0A0A0K7X7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G014850 PE=4 SV=1)

HSP 1 Score: 270.8 bits (691), Expect = 1.2e-69
Identity = 141/174 (81.03%), Postives = 148/174 (85.06%), Query Frame = 1


Query: 1   MAASISTSPYPLLTSERSNRFAVNDSSSSRLFFSSSLQLPVQLRCVRLGNCGISAPSRSR 60
           MAAS STSPYP+LTS RSNR     SSSS L FSSSL LP+QLR   L N  IS PS S 
Sbjct: 1   MAASFSTSPYPILTSHRSNRLPAYHSSSSSLSFSSSLHLPLQLRRFPLANTRISPPSSSP 60

Query: 61  IFPVVKAKNQTFSSFDDLLANSDKPVLVDFYATWCGPCQFMVPILEKVSDALSDTVQVVK 120
            FPVVKAKNQTFSSFDDLLANSD PVLVDFYATWCGPCQFMVPILE+VS AL D VQVVK
Sbjct: 61  SFPVVKAKNQTFSSFDDLLANSDTPVLVDFYATWCGPCQFMVPILEQVSAALIDKVQVVK 120

Query: 121 IDTEKYPVIADKYKIEALPTFILFKDGKPLDRFEGAVAAGELIQRIENSLKIKQ 175
           IDTEKYP IADKY+IEALPTFILFKDGKPLDRFEGA+AA ELIQRIE+SLK+KQ
Sbjct: 121 IDTEKYPAIADKYRIEALPTFILFKDGKPLDRFEGALAARELIQRIEDSLKVKQ 174

[Close]

BLAST of CmoCh09G011810 vs. TrEMBL
Match: M5VN05_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012274mg PE=4 SV=1)

HSP 1 Score: 240.4 bits (612), Expect = 1.7e-60
Identity = 119/177 (67.23%), Postives = 141/177 (79.66%), Query Frame = 1


Query: 1   MAASISTSPYPLLTSERSNRFAVNDSSS---SRLFFSSSLQLPVQLRCVRLGNCGISAPS 60
           MA S++ S      S+R+ R A   SSS   S+L  SSSLQ+PVQLRCVR+G  G+SAPS
Sbjct: 1   MAVSVTASTISSFRSDRTTRIAATSSSSASCSKLSSSSSLQVPVQLRCVRIGRSGVSAPS 60

Query: 61  RSRIFPVVKAKNQTFSSFDDLLANSDKPVLVDFYATWCGPCQFMVPILEKVSDALSDTVQ 120
           R RI PVV AK QTFSSF+DLLA SDKP+LVDFYATWCGPCQFM PIL +VS  L+D +Q
Sbjct: 61  RPRILPVVAAKKQTFSSFEDLLATSDKPILVDFYATWCGPCQFMAPILNEVSITLNDKIQ 120

Query: 121 VVKIDTEKYPVIADKYKIEALPTFILFKDGKPLDRFEGAVAAGELIQRIENSLKIKQ 175
           VVKIDTEKYP IADKY I+ALPTFI+FKDG+P DRFEGA+ A +L++RIE +LK+KQ
Sbjct: 121 VVKIDTEKYPSIADKYNIQALPTFIIFKDGEPYDRFEGALTADQLVERIETTLKVKQ 177

[Close]

BLAST of CmoCh09G011810 vs. TrEMBL
Match: D7SRD7_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0072g00400 PE=4 SV=1)

HSP 1 Score: 235.3 bits (599), Expect = 5.5e-59
Identity = 120/175 (68.57%), Postives = 140/175 (80.00%), Query Frame = 1


Query: 1   MAASISTSPYPLLTSERSNRFAVNDSS-SSRLFFSSSLQLPVQLRCVRLGNCGISAPSRS 60
           MA S++ S    L S+R    A + SS SS+LF SS LQ P QLR +R+GN GIS+PSR 
Sbjct: 1   MATSLTFSTVRALNSQRPTPLAFSSSSPSSKLFSSSPLQFPRQLRPIRIGNNGISSPSRP 60

Query: 61  RIFPVVKAKNQTFSSFDDLLANSDKPVLVDFYATWCGPCQFMVPILEKVSDALSDTVQVV 120
           R  PVV+AK QTFSS D+LLANS+KPVLVDFYATWCGPCQFMVPIL +V  +L D +QVV
Sbjct: 61  RTLPVVEAKKQTFSSLDELLANSEKPVLVDFYATWCGPCQFMVPILNEVGASLKDKIQVV 120

Query: 121 KIDTEKYPVIADKYKIEALPTFILFKDGKPLDRFEGAVAAGELIQRIENSLKIKQ 175
           KIDTEKYP IADKY+IEALPTFI+FKDGKP DRFEGA+ A +LIQRIE +LK+KQ
Sbjct: 121 KIDTEKYPSIADKYRIEALPTFIIFKDGKPYDRFEGALTADQLIQRIETTLKVKQ 175

[Close]

BLAST of CmoCh09G011810 vs. TrEMBL
Match: W9S850_9ROSA (Thioredoxin Y1 OS=Morus notabilis GN=L484_017852 PE=4 SV=1)

HSP 1 Score: 227.3 bits (578), Expect = 1.5e-56
Identity = 124/180 (68.89%), Postives = 142/180 (78.89%), Query Frame = 1


Query: 1   MAASISTSPYPLLTSERSNRFAVNDSSSS----RLF-FSSSLQLPVQLRCVRLGNCGISA 60
           MA S+STS  P L S+RSNRFA +  SSS    RL  +SSSL  P+     R+G  G+S+
Sbjct: 1   MAVSVSTSSIPSLNSDRSNRFATSAISSSSPGLRLSSYSSSLLFPL-----RIGTGGLSS 60

Query: 61  PSR-SRIFPVVKAKNQTFSSFDDLLANSDKPVLVDFYATWCGPCQFMVPILEKVSDALSD 120
            SR  RI PVVKAK QTFSSFDDLLA SDKPVLVDFYATWCGPCQFMVPIL +VS +L+D
Sbjct: 61  SSRRKRILPVVKAKKQTFSSFDDLLAKSDKPVLVDFYATWCGPCQFMVPILNEVSASLND 120

Query: 121 TVQVVKIDTEKYPVIADKYKIEALPTFILFKDGKPLDRFEGAVAAGELIQRIENSLKIKQ 175
            +QVVKIDTEKYP IA+KY IEALPTFI+FKD KP DRFEGA+ A +LIQRIE++LKIKQ
Sbjct: 121 KIQVVKIDTEKYPSIANKYNIEALPTFIIFKDAKPFDRFEGAMTAAQLIQRIEDALKIKQ 175

[Close]

BLAST of CmoCh09G011810 vs. TrEMBL
Match: A0A061FI77_THECC (Thioredoxin Y1 isoform 1 OS=Theobroma cacao GN=TCM_035632 PE=4 SV=1)

HSP 1 Score: 217.2 bits (552), Expect = 1.5e-53
Identity = 115/175 (65.71%), Postives = 134/175 (76.57%), Query Frame = 1


Query: 1   MAASISTSPYPLLTSERSNRFAVNDSSSSRLFFSSSLQLPVQLRCVRLGNCGISAPSRSR 60
           MA S+S    P L  + S + +  D SS +L FSSSLQ P++   +R+GN  IS+ S  R
Sbjct: 1   MAISVSAPTLPALNPQNSTKLSCYDYSS-KLSFSSSLQFPLRSHPIRIGNKAISSSSLPR 60

Query: 61  IFP-VVKAKNQTFSSFDDLLANSDKPVLVDFYATWCGPCQFMVPILEKVSDALSDTVQVV 120
             P VV+AK QTF+SFDDLLA+SDKPVLVDFYATWCGPCQFMV IL +VS AL D +QVV
Sbjct: 61  HRPLVVEAKKQTFNSFDDLLASSDKPVLVDFYATWCGPCQFMVSILNEVSTALKDKIQVV 120

Query: 121 KIDTEKYPVIADKYKIEALPTFILFKDGKPLDRFEGAVAAGELIQRIENSLKIKQ 175
           KIDTEKYP IA KY+IEALPTFI+FKDGKP DRFEGA+ A  LIQRIENSL +KQ
Sbjct: 121 KIDTEKYPSIAGKYRIEALPTFIIFKDGKPFDRFEGALTADLLIQRIENSLSVKQ 174

[Close]

BLAST of CmoCh09G011810 vs. TAIR10
Match: AT1G76760.1 (AT1G76760.1 thioredoxin Y1)

HSP 1 Score: 191.4 bits (485), Expect = 4.6e-49
Identity = 105/172 (61.05%), Postives = 128/172 (74.42%), Query Frame = 1


Query: 4   SISTSPYPLLTSERSNRFAVNDSSSSRLFFSSSLQLPVQLRCVRLGNCGI-SAPSRSRIF 63
           S+S+S  P L S+ S+  +   + +SR   +   Q PV  R VR G+    S  S +R  
Sbjct: 5   SLSSSTVPSLNSKESSGVS---AFASRSISAVKFQFPV--RRVRTGDLKFPSLSSTTRCT 64

Query: 64  PV-VKAKNQTFSSFDDLLANSDKPVLVDFYATWCGPCQFMVPILEKVSDALSDTVQVVKI 123
           P  ++AK QTF SF+DLL NSDKPVLVD+YATWCGPCQFMVPIL +VS+ L D +QVVKI
Sbjct: 65  PRRIEAKKQTFDSFEDLLVNSDKPVLVDYYATWCGPCQFMVPILNEVSETLKDKIQVVKI 124

Query: 124 DTEKYPVIADKYKIEALPTFILFKDGKPLDRFEGAVAAGELIQRIENSLKIK 174
           DTEKYP IA+KYKIEALPTFILFKDG+P DRFEGA+ A +LIQRIE+SLK+K
Sbjct: 125 DTEKYPSIANKYKIEALPTFILFKDGEPCDRFEGALTAKQLIQRIEDSLKVK 171

[Close]

BLAST of CmoCh09G011810 vs. TAIR10
Match: AT1G43560.1 (AT1G43560.1 thioredoxin Y2)

HSP 1 Score: 187.6 bits (475), Expect = 6.6e-48
Identity = 107/178 (60.11%), Postives = 130/178 (73.03%), Query Frame = 1


Query: 1   MAASISTSPY-PLLTSERSNRFAVNDSSSSRLFFSSSLQLPVQLRCVRLGNCGISAPSRS 60
           MA S++T+   P  T E SN      +S SR    SS++LP Q+R  R G+  + +PS S
Sbjct: 1   MAISLATAYISPCFTPESSN-----SASPSRTL--SSVRLPSQIR--RFGS--VQSPSSS 60

Query: 61  RIFP---VVKAKNQTFSSFDDLLANSDKPVLVDFYATWCGPCQFMVPILEKVSDALSDTV 120
             F    V  AK QTF+SFDDLL NSDKPVLVDFYATWCGPCQ MVPIL +VS+ L D +
Sbjct: 61  TRFAPLTVRAAKKQTFNSFDDLLQNSDKPVLVDFYATWCGPCQLMVPILNEVSETLKDII 120

Query: 121 QVVKIDTEKYPVIADKYKIEALPTFILFKDGKPLDRFEGAVAAGELIQRIENSLKIKQ 175
            VVKIDTEKYP +A+KY+IEALPTFILFKDGK  DRFEGA+ A +L++RIENSL++KQ
Sbjct: 121 AVVKIDTEKYPSLANKYQIEALPTFILFKDGKLWDRFEGALPANQLVERIENSLQVKQ 167

[Close]

BLAST of CmoCh09G011810 vs. TAIR10
Match: AT1G50320.1 (AT1G50320.1 thioredoxin X)

HSP 1 Score: 87.0 bits (214), Expect = 1.2e-17
Identity = 59/173 (34.10%), Postives = 86/173 (49.71%), Query Frame = 1


Query: 2   AASISTSPYPLL--TSERSNRFAVNDSSSSRLFFSSSLQLPVQLRCVRLGNCGISAPSRS 61
           A S+S  P   +  TS  +NR  ++ SS +R    SS  +   +RC  +   G S     
Sbjct: 26  ATSVSVKPLSSVQVTSVAANRHLLSLSSGARRTRKSSSSV---IRCGGIKEIGES----- 85

Query: 62  RIFPVVKAKNQTFSSFDDLLANSDKPVLVDFYATWCGPCQFMVPILEKVSDALSDTVQVV 121
                          F   +  S +PVLV+F ATWCGPC+ + P +E +S    D + +V
Sbjct: 86  --------------EFSSTVLESAQPVLVEFVATWCGPCKLIYPAMEALSQEYGDKLTIV 145

Query: 122 KIDTEKYPVIADKYKIEALPTFILFKDGK--PLDRFEGAVAAGELIQRIENSL 171
           KID +  P +  ++K+  LP FILFKDGK  P  R EGA+   +L + I+  L
Sbjct: 146 KIDHDANPKLIAEFKVYGLPHFILFKDGKEVPGSRREGAITKAKLKEYIDGLL 176

[Close]

BLAST of CmoCh09G011810 vs. TAIR10
Match: AT3G15360.1 (AT3G15360.1 thioredoxin M-type 4)

HSP 1 Score: 82.4 bits (202), Expect = 3.0e-16
Identity = 57/176 (32.39%), Postives = 91/176 (51.70%), Query Frame = 1


Query: 1   MAASISTSPYPLLTSERSN------RFAVNDSSSSRLFFSSSLQLPVQLRCVRLGNCGIS 60
           +AAS+S+S      S R         F    SS S +  S+SL    + R  R G   I+
Sbjct: 18  IAASVSSSSAAPSVSRRRISPARFLEFRGLKSSRSLVTQSASLGANRRTRIARGGR--IA 77

Query: 61  APSRSRIFPVVKAKNQTFSSFDDLLANSDKPVLVDFYATWCGPCQFMVPILEKVSDALSD 120
             ++      V+  N + S +   +  SD PVLV+F+A WCGPC+ + PI+++++   + 
Sbjct: 78  CEAQDTTAAAVEVPNLSDSEWQTKVLESDVPVLVEFWAPWCGPCRMIHPIVDQLAKDFAG 137

Query: 121 TVQVVKIDTEKYPVIADKYKIEALPTFILFKDGKPLDRFEGAVAAGELIQRIENSL 171
             +  KI+T++ P  A++Y I ++PT I+FK G+  D   GAV    L + IE  L
Sbjct: 138 KFKFYKINTDESPNTANRYGIRSVPTVIIFKGGEKKDSIIGAVPRETLEKTIERFL 191

[Close]

BLAST of CmoCh09G011810 vs. TAIR10
Match: AT1G03680.1 (AT1G03680.1 thioredoxin M-type 1)

HSP 1 Score: 75.5 bits (184), Expect = 3.7e-14
Identity = 54/183 (29.51%), Postives = 91/183 (49.73%), Query Frame = 1


Query: 1   MAASISTSPYPL-LTSERSNRFAVNDSSSSRLFFS-----SSLQLPVQLRCVRLGNCGIS 60
           MAA   TS  P+ + SE     +   S S+R  FS     S L+  V L  +       S
Sbjct: 1   MAAYTCTSRPPISIRSEMRIASSPTGSFSTRQMFSVLPESSGLRTRVSLSSLSKN----S 60

Query: 61  APSRSRIFPVVKAKNQTF-------SSFDDLLANSDKPVLVDFYATWCGPCQFMVPILEK 120
             SR R   + +A++          S++D L+  +D+PV VDF+A WCGPC+ + PI+ +
Sbjct: 61  RVSRLRRGVICEAQDTATGIPVVNDSTWDSLVLKADEPVFVDFWAPWCGPCKMIDPIVNE 120

Query: 121 VSDALSDTVQVVKIDTEKYPVIADKYKIEALPTFILFKDGKPLDRFEGAVAAGELIQRIE 171
           ++   +   +  K++T++ P    +Y + ++PT ++F +G+  D   GAV+   L   I 
Sbjct: 121 LAQKYAGQFKFYKLNTDESPATPGQYGVRSIPTIMIFVNGEKKDTIIGAVSKDTLATSIN 179

[Close]

BLAST of CmoCh09G011810 vs. NCBI nr
Match: gi|659126232|ref|XP_008463079.1| (PREDICTED: thioredoxin Y1, chloroplastic [Cucumis melo])

HSP 1 Score: 276.6 bits (706), Expect = 3.1e-71
Identity = 144/174 (82.76%), Postives = 150/174 (86.21%), Query Frame = 1


Query: 1   MAASISTSPYPLLTSERSNRFAVNDSSSSRLFFSSSLQLPVQLRCVRLGNCGISAPSRSR 60
           MAAS STSPYPLLTS RSNR     SSSS L  SSSL LP+QLR  RLGN  IS PS SR
Sbjct: 1   MAASFSTSPYPLLTSHRSNRLPAYHSSSSALSSSSSLHLPLQLRRFRLGNTRISPPSPSR 60

Query: 61  IFPVVKAKNQTFSSFDDLLANSDKPVLVDFYATWCGPCQFMVPILEKVSDALSDTVQVVK 120
             P+VKAKNQTFSSFDDLLANSDKPVLVDFYATWCGPCQFMVPILEKVS AL D VQVVK
Sbjct: 61  TLPLVKAKNQTFSSFDDLLANSDKPVLVDFYATWCGPCQFMVPILEKVSAALIDKVQVVK 120

Query: 121 IDTEKYPVIADKYKIEALPTFILFKDGKPLDRFEGAVAAGELIQRIENSLKIKQ 175
           IDTEKYP IADKY+IEALPTFILFKDGKPLDRFEGA+AA ELIQRIE+SLK+KQ
Sbjct: 121 IDTEKYPAIADKYRIEALPTFILFKDGKPLDRFEGALAARELIQRIEDSLKVKQ 174

[Close]

BLAST of CmoCh09G011810 vs. NCBI nr
Match: gi|449441218|ref|XP_004138379.1| (PREDICTED: thioredoxin Y1, chloroplastic [Cucumis sativus])

HSP 1 Score: 270.8 bits (691), Expect = 1.7e-69
Identity = 141/174 (81.03%), Postives = 148/174 (85.06%), Query Frame = 1


Query: 1   MAASISTSPYPLLTSERSNRFAVNDSSSSRLFFSSSLQLPVQLRCVRLGNCGISAPSRSR 60
           MAAS STSPYP+LTS RSNR     SSSS L FSSSL LP+QLR   L N  IS PS S 
Sbjct: 1   MAASFSTSPYPILTSHRSNRLPAYHSSSSSLSFSSSLHLPLQLRRFPLANTRISPPSSSP 60

Query: 61  IFPVVKAKNQTFSSFDDLLANSDKPVLVDFYATWCGPCQFMVPILEKVSDALSDTVQVVK 120
            FPVVKAKNQTFSSFDDLLANSD PVLVDFYATWCGPCQFMVPILE+VS AL D VQVVK
Sbjct: 61  SFPVVKAKNQTFSSFDDLLANSDTPVLVDFYATWCGPCQFMVPILEQVSAALIDKVQVVK 120

Query: 121 IDTEKYPVIADKYKIEALPTFILFKDGKPLDRFEGAVAAGELIQRIENSLKIKQ 175
           IDTEKYP IADKY+IEALPTFILFKDGKPLDRFEGA+AA ELIQRIE+SLK+KQ
Sbjct: 121 IDTEKYPAIADKYRIEALPTFILFKDGKPLDRFEGALAARELIQRIEDSLKVKQ 174

[Close]

BLAST of CmoCh09G011810 vs. NCBI nr
Match: gi|595798572|ref|XP_007201408.1| (hypothetical protein PRUPE_ppa012274mg [Prunus persica])

HSP 1 Score: 240.4 bits (612), Expect = 2.4e-60
Identity = 119/177 (67.23%), Postives = 141/177 (79.66%), Query Frame = 1


Query: 1   MAASISTSPYPLLTSERSNRFAVNDSSS---SRLFFSSSLQLPVQLRCVRLGNCGISAPS 60
           MA S++ S      S+R+ R A   SSS   S+L  SSSLQ+PVQLRCVR+G  G+SAPS
Sbjct: 1   MAVSVTASTISSFRSDRTTRIAATSSSSASCSKLSSSSSLQVPVQLRCVRIGRSGVSAPS 60

Query: 61  RSRIFPVVKAKNQTFSSFDDLLANSDKPVLVDFYATWCGPCQFMVPILEKVSDALSDTVQ 120
           R RI PVV AK QTFSSF+DLLA SDKP+LVDFYATWCGPCQFM PIL +VS  L+D +Q
Sbjct: 61  RPRILPVVAAKKQTFSSFEDLLATSDKPILVDFYATWCGPCQFMAPILNEVSITLNDKIQ 120

Query: 121 VVKIDTEKYPVIADKYKIEALPTFILFKDGKPLDRFEGAVAAGELIQRIENSLKIKQ 175
           VVKIDTEKYP IADKY I+ALPTFI+FKDG+P DRFEGA+ A +L++RIE +LK+KQ
Sbjct: 121 VVKIDTEKYPSIADKYNIQALPTFIIFKDGEPYDRFEGALTADQLVERIETTLKVKQ 177

[Close]

BLAST of CmoCh09G011810 vs. NCBI nr
Match: gi|645264797|ref|XP_008237848.1| (PREDICTED: thioredoxin Y1, chloroplastic [Prunus mume])

HSP 1 Score: 237.7 bits (605), Expect = 1.6e-59
Identity = 118/177 (66.67%), Postives = 141/177 (79.66%), Query Frame = 1


Query: 1   MAASISTSPYPLLTSERSNRFAVNDSSS---SRLFFSSSLQLPVQLRCVRLGNCGISAPS 60
           MA S++ S     +S+R+ R A   SSS   S+L  SS LQ+PVQLRCVR+G  G+SAPS
Sbjct: 1   MAVSVTASTISSFSSDRTTRIAATSSSSASCSKLSSSSFLQVPVQLRCVRIGRSGVSAPS 60

Query: 61  RSRIFPVVKAKNQTFSSFDDLLANSDKPVLVDFYATWCGPCQFMVPILEKVSDALSDTVQ 120
           R RI PVV AK QTFSSF+DLLA SDKPVLVDFYATWCGPCQFM PIL +VS  L+D +Q
Sbjct: 61  RPRILPVVAAKKQTFSSFEDLLATSDKPVLVDFYATWCGPCQFMAPILNEVSITLNDKIQ 120

Query: 121 VVKIDTEKYPVIADKYKIEALPTFILFKDGKPLDRFEGAVAAGELIQRIENSLKIKQ 175
           VVKIDTEKYP IADKY I+ALPTFI+FKDG+P DRFEGA+ A +L++RIE +L++KQ
Sbjct: 121 VVKIDTEKYPSIADKYNIQALPTFIIFKDGEPYDRFEGALTADQLVERIETTLQVKQ 177

[Close]

BLAST of CmoCh09G011810 vs. NCBI nr
Match: gi|225460644|ref|XP_002266350.1| (PREDICTED: thioredoxin Y1, chloroplastic [Vitis vinifera])

HSP 1 Score: 235.3 bits (599), Expect = 7.8e-59
Identity = 120/175 (68.57%), Postives = 140/175 (80.00%), Query Frame = 1


Query: 1   MAASISTSPYPLLTSERSNRFAVNDSS-SSRLFFSSSLQLPVQLRCVRLGNCGISAPSRS 60
           MA S++ S    L S+R    A + SS SS+LF SS LQ P QLR +R+GN GIS+PSR 
Sbjct: 1   MATSLTFSTVRALNSQRPTPLAFSSSSPSSKLFSSSPLQFPRQLRPIRIGNNGISSPSRP 60

Query: 61  RIFPVVKAKNQTFSSFDDLLANSDKPVLVDFYATWCGPCQFMVPILEKVSDALSDTVQVV 120
           R  PVV+AK QTFSS D+LLANS+KPVLVDFYATWCGPCQFMVPIL +V  +L D +QVV
Sbjct: 61  RTLPVVEAKKQTFSSLDELLANSEKPVLVDFYATWCGPCQFMVPILNEVGASLKDKIQVV 120

Query: 121 KIDTEKYPVIADKYKIEALPTFILFKDGKPLDRFEGAVAAGELIQRIENSLKIKQ 175
           KIDTEKYP IADKY+IEALPTFI+FKDGKP DRFEGA+ A +LIQRIE +LK+KQ
Sbjct: 121 KIDTEKYPSIADKYRIEALPTFIIFKDGKPYDRFEGALTADQLIQRIETTLKVKQ 175

The following BLAST results are available for this feature:

BLAST of CmoCh09G011810 vs. Swiss-Prot


Match Name	E-value	Identity	Description
TRXY1_ARATH	8.1e-48	61.05	Thioredoxin Y1, chloroplastic OS=Arabidopsis thaliana GN=At1g76760 PE=2 SV=1	[more]
TRXY2_ARATH	1.2e-46	60.11	Thioredoxin Y2, chloroplastic OS=Arabidopsis thaliana GN=At1g43560 PE=2 SV=1	[more]
TRXY_ORYSJ	1.9e-41	67.23	Thioredoxin Y, chloroplastic OS=Oryza sativa subsp. japonica GN=Os01g0963400 PE=...	[more]
THIO1_SYNY3	1.7e-29	57.43	Thioredoxin-like protein slr0233 OS=Synechocystis sp. (strain PCC 6803 / Kazusa)...	[more]
THIO_RICBR	3.9e-18	41.35	Thioredoxin OS=Rickettsia bellii (strain RML369-C) GN=trxA PE=3 SV=2	[more]

BLAST of CmoCh09G011810 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K7X7_CUCSA	1.2e-69	81.03	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G014850 PE=4 SV=1	[more]
M5VN05_PRUPE	1.7e-60	67.23	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012274mg PE=4 SV=1	[more]
D7SRD7_VITVI	5.5e-59	68.57	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0072g00400 PE=4 SV=...	[more]
W9S850_9ROSA	1.5e-56	68.89	Thioredoxin Y1 OS=Morus notabilis GN=L484_017852 PE=4 SV=1	[more]
A0A061FI77_THECC	1.5e-53	65.71	Thioredoxin Y1 isoform 1 OS=Theobroma cacao GN=TCM_035632 PE=4 SV=1	[more]

BLAST of CmoCh09G011810 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G76760.1	4.6e-49	61.05	thioredoxin Y1	[more]
AT1G43560.1	6.6e-48	60.11	thioredoxin Y2	[more]
AT1G50320.1	1.2e-17	34.10	thioredoxin X	[more]
AT3G15360.1	3.0e-16	32.39	thioredoxin M-type 4	[more]
AT1G03680.1	3.7e-14	29.51	thioredoxin M-type 1	[more]

BLAST of CmoCh09G011810 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659126232\|ref\|XP_008463079.1\|	3.1e-71	82.76	PREDICTED: thioredoxin Y1, chloroplastic [Cucumis melo]	[more]
gi\|449441218\|ref\|XP_004138379.1\|	1.7e-69	81.03	PREDICTED: thioredoxin Y1, chloroplastic [Cucumis sativus]	[more]
gi\|595798572\|ref\|XP_007201408.1\|	2.4e-60	67.23	hypothetical protein PRUPE_ppa012274mg [Prunus persica]	[more]
gi\|645264797\|ref\|XP_008237848.1\|	1.6e-59	66.67	PREDICTED: thioredoxin Y1, chloroplastic [Prunus mume]	[more]
gi\|225460644\|ref\|XP_002266350.1\|	7.8e-59	68.57	PREDICTED: thioredoxin Y1, chloroplastic [Vitis vinifera]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR005746	Thioredoxin
IPR012336	Thioredoxin-like_fold
IPR013766	Thioredoxin_domain
IPR017937	Thioredoxin_CS

Vocabulary: **Biological Process**
Term	Definition
GO:0006662	glycerol ether metabolic process
GO:0045454	cell redox homeostasis

Vocabulary: **Molecular Function**
Term	Definition
GO:0015035	protein disulfide oxidoreductase activity

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045454	cell redox homeostasis
biological_process	GO:0006662	glycerol ether metabolic process
biological_process	GO:0055114	oxidation-reduction process
biological_process	GO:0006457	protein folding
biological_process	GO:0043085	positive regulation of catalytic activity
biological_process	GO:0034599	cellular response to oxidative stress
cellular_component	GO:0005623	cell
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0003756	protein disulfide isomerase activity
molecular_function	GO:0015035	protein disulfide oxidoreductase activity
molecular_function	GO:0008047	enzyme activator activity
molecular_function	GO:0016671	oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor
molecular_function	GO:0016853	isomerase activity
molecular_function	GO:0047134	protein-disulfide reductase activity
molecular_function	GO:0004791	thioredoxin-disulfide reductase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh09G011810.1	CmoCh09G011810.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005746	Thioredoxin	PANTHER	PTHR10438	THIOREDOXIN	coord: 1..171 score: 9.8
IPR005746	Thioredoxin	TIGRFAMs	TIGR01068	TIGR01068	coord: 72..168 score: 1.6
IPR012336	Thioredoxin-like fold	GENE3D	G3DSA:3.40.30.10		coord: 71..170 score: 5.1
IPR012336	Thioredoxin-like fold	unknown	SSF52833	Thioredoxin-like	coord: 71..171 score: 4.71
IPR013766	Thioredoxin domain	PFAM	PF00085	Thioredoxin	coord: 71..167 score: 2.1
IPR013766	Thioredoxin domain	PROFILE	PS51352	THIOREDOXIN_2	coord: 49..171 score: 16
IPR017937	Thioredoxin, conserved site	PROSITE	PS00194	THIOREDOXIN_1	coord: 87..105 scor
None	No IPR available	PRINTS	PR00421	THIOREDOXIN	coord: 94..103 score: 2.7E-7coord: 86..94 score: 2.7E-7coord: 134..145 score: 2.
None	No IPR available	PANTHER	PTHR10438:SF280	THIOREDOXIN Y1, CHLOROPLASTIC-RELATED	coord: 1..171 score: 9.8

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh09G011810	Cucsa.325740	Cucumber (Gy14) v1	cgycmoB0899
CmoCh09G011810	CmaCh01G009060	Cucurbita maxima (Rimu)	cmacmoB441
CmoCh09G011810	Csa6G014850	Cucumber (Chinese Long) v2	cmocuB025
CmoCh09G011810	MELO3C025023	Melon (DHL92) v3.5.1	cmomeB018
CmoCh09G011810	CSPI06G02440	Wild cucumber (PI 183967)	cmocpiB025
CmoCh09G011810	Cp4.1LG02g09430	Cucurbita pepo (Zucchini)	cmocpeB021
CmoCh09G011810	CsGy6G002480	Cucumber (Gy14) v2	cgybcmoB687

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmoCh09G011810	CmoCh01G009460	Cucurbita moschata (Rifu)	cmocmoB024

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh09G011810	Cucumber (Chinese Long) v3	cmocucB0030
CmoCh09G011810	Watermelon (97103) v2	cmowmbB029
CmoCh09G011810	Wax gourd	cmowgoB0012
CmoCh09G011810	Cucurbita maxima (Rimu)	cmacmoB027
CmoCh09G011810	Watermelon (Charleston Gray)	cmowcgB028
CmoCh09G011810	Watermelon (97103) v1	cmowmB012
CmoCh09G011810	Cucurbita pepo (Zucchini)	cmocpeB012
CmoCh09G011810	Bottle gourd (USVL1VR-Ls)	cmolsiB026
CmoCh09G011810	Melon (DHL92) v3.6.1	cmomedB016