CSPI06G02440 (gene) Wild cucumber (PI 183967) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CSPI06G02440
Type	gene
Organism	Cucumis sativus (Wild cucumber (PI 183967))
Description	Thioredoxin
Location	Chr6 : 1828354 .. 1832016 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATCTCATTCCTTTCATCCAACGCTTCTCATTTATCAGGAACAGAATAGCTAAAATTTTCCCCTTCACTTCTCGTTGTCCGATTGAAGCCAAAACAGACGACAGAATTCCTCTATCGACATTGTGGGAGCTGAGAGAGCCTTCACATGGCGGCCTCCTTTTCAACTTCACCTTATCCTATCCTCACCTCTCACCGCTCCAATCGCTTGCCTGCATACCATTCTTCTTCATCCAGCCTCTCTTTCTCCTCCTCTCTACACCTACCTCTTCAGCTTAGACGTTTTCCACTTGCAAACACTCGGATTTCACCTCCATCCTCCTCTCCATCCTTCCCTGTGGTAATCATCTCTTTTCTTTCATCTTTTTGTCGTTTTAAACGAGGAACTAATGAACAATTTGTCATCCATGGTTTTTCCATTTATTTCGCGCCTAAATTTCCTCCACTTATTCTTAATTTCTAGGTTTCTTCGCTTAATGCTAACTATAGACGTTCTGGAGAACGAAACTCATATGACTTCGTTGTTTTTCTTTTATTTCTGGAATTCCTTTTTGTTTGAATTTTGATTCTAACCGTGTTTACTACCTCCTTACGCAGAACTAGAACCTATATGGTTCATTTGTTATATTGGAGTTCGCTCATCTAGTTACATATTTGGATTTGTTTCTATCTGATTCTATTATTTTTCCGATTCATTCCAAATCTCAGTTCTTAACTAGTTTCCGCATTATTGTTCACTCTGAGTAGTTAGCAAGATTGCATTTCCCTTTTTCTCGTGCTTCATGCGCTTGAAAGCACAACTGCTGCATTCGTATTTTTCCTGATTCTGACGTAGTTTGTTTAAAATGGATGACAATTTTAGTTAAAACTGCTGTAACGAATAACAATGGACTTGTTCGAACTTCTGTAGGTCAAAGCAAAGAACCAAACCTTCTCTTCCTTTGATGATTTACTGGCCAACTCGGACACACCTGTGTTAGTTGACTTCTATGCAACATGGTTAGTCCCTTTCTCTCTCTTCTGCACACACCTATATCTCATCACTTCTCTCTCAAAATGGTATTGGTAATCTGTGGGAATCATATTTTTAACCTATAATTTCAAAATAAGCTATTGTTCCTCTGGATCAATGAGCATGTTAGTGCTTAACTATTGAGGAGAAAATGAGAGGCATAAGGGTATTGTGGAACAGATTTTTTTTTTTTTTTTTTGTAGAAGGAAGTAATGTAATGTAATGTTTGTAAACGATGAGTAAAAATGTAAAATGTGGTATGTCTGTGTATTCCTTCATTTCTACTCAATGAAAGTTGTTTCAATAATAACAGAAATACTGAGTAAACATAGCTCCTCTATCGCAGGTGTGGTCCTTGTCAGTTCATGGTTCCTATTCTTGAACAAGTTAGTGCAGCACTGATTGACAAAGTCCAGGTGGTCAAGATTGACACCGAAAAATATCCTGCCATTGCTGATAAATACAGAATAGAGGCATTGCCTACATTCATCCTCTTCAAAGATGGAAAACCCCTTGACCGATTCGTAAGTGAAAGCTTTATATTTTTTCTAGCCAATTGGAGATATATCAAATGTATGATAAGTTTATGCATGAAGAAACGACATATATGTTTCAGAATCTTATTCGATTTCATTTTTGAGTTGAACTAAAATGGGAAGTTTTCAAATGATTAGTTGTGTCAAGAAAGTCTGATTATCCTTGAAGTTTCTATTAAGATTTATCCTTTAATACCTCAAAACCATTGTCTACTGTATCTTTACTCTACTTTTTACCAGTTTAATTTCAAAGAGTTAAAAAGGGTAGGCCCAAGCTTCCATTGTGCAGTTTGCTACCGTTGATTTAATCACATTAGCACATCTTCTTTCTTGCTAGGCTACAACTATTTTTCCTTTTCTGTTAGTTCTAGTGCTATCTCATAAACAGTTTTTTAACATTTTAGACTTCCCTGTTGAAATGTCTGGCAAATGGACGTTCGGTTTCTTGTGCTTAGATTATTTATTATTTATTTTAAACATGCATGCAAATTATATATGTTCAGGAAGGAGCTTTGGCTGCGCGTGAGCTCATCCAACGCATTGAAGATTCTCTGAAGGTTAAGCAATAACAGTGGTGAGATTCTATACCCCGATTGAGGAGTTTATCTAAACTTGCATGCTTAAAAGATTTAGCACCCCAAACCAAATCCCTGACTGTAATCAAAATCAATTTTTTGCTAATAATTTTAGATTCACGTTCTGATAAATATGAATAGATGAAACTTAAAATACTTTGTTGGTTTATAATGCATTTAAAGGAGTAGACACAGTAAGCACACAACTCACATTTAGAGGGTCTATCAAATTAGAATCAGCTTGCTAATGTAAAAGTGTCAATTCTGGTTATAATAACCATACCCAAGACTAAGTTGGGGACTTCAGCCTCTTGCTTGGTAGTTGACCTAGACTATACCTTTCCTTAGTAGTTTCCAATTCTGATTCATGGGGCTATCGTCCATGTGCCTGGTTCTTTTTTAACATTGAAAGCAGTTTAGTATCACTCTGTCACATGTTCGGCTTTCACTTTTTATTTTTTTTATTAATCTTTCTCCACAAAGCTTCTGCGAGGGTGGTAAGAAAATAGTTATAACTGGTATCTACACCCAAACATAAATTATTGTAATCCACAAACTATAATAACCAACTCAACATCCCACACACTTAAAGTTTCCTTCTAGTACTCTAGAGTTTAGTCTTCTTTGCCTGAACTTGATAAACTTATTCCGTTAATTAAAGGACAAGTGGACAACTAATTTTGTTATCTGGTCGATCATCAAGAATATGATATTGTATTCCATGGCATGTCTTTTCGAGTGTTTATTCATCTTGAACTTTGATTAAAATTTCAAAGTTAATCACCTACTAAATATTTAAAAACACTCCAATTTTTTAAAGTTTTATGTATCTATAGTTTCTTCATTCTTGAGTTTTCAAATCTTATAAGTATTTGAATGTAGGTTGATAATTAAAAATATTAATTATGCCAATTGAGATTAAAGTATTACTTTTGTATCAATTGACTTGCATGACAGAAATACTCTATTGAGAAGTTTCCTGATACTACAAGTATAAACTATAAAATTTTGAGAACACGTGATTTATTCTTCTAAAATTCTGGGATGTTGAACATGCAGGGGAGATGTGACTGAGAAATTAAAGAAATGGAAATCAATGTCTTCAACAGGAATTCTGGGTATGATAGATGAGAAACTTCAATAAAATTAACCCCCCCTCTCAAACCAAAAAATGAAAAAAAGAAAAGAAAGAACATTTTAGACCACTCTGTAAACTTGTATGTAATTGAAATACCTTGAAGAATGTAACTATAGACGTTCGTATTAATCCCAATTTTTGTGTTCATTTTATTGCAATAAGATGCTTAATGTTCCTGATAAATAAACATTCAGTTTGTGGCTATGTTTACAATGTTGATGAATTGGTACAAGGGTATTCTTAAGTGGCAGAGTGGGCTTGGGCTTGCTGCCACGATCTACTGTGACCTAGTCCTTTGTTACTCCGATTTGAAAAAATACAATGTTGATGAATTGGTGATAGATGTGTAATAAGATGGGGAATTGTTACACATTTGATTTTTTAATTTGAGTAATTATTCTTTTAG

mRNA sequence

ATGGCGGCCTCCTTTTCAACTTCACCTTATCCTATCCTCACCTCTCACCGCTCCAATCGCTTGCCTGCATACCATTCTTCTTCATCCAGCCTCTCTTTCTCCTCCTCTCTACACCTACCTCTTCAGCTTAGACGTTTTCCACTTGCAAACACTCGGATTTCACCTCCATCCTCCTCTCCATCCTTCCCTGTGGTCAAAGCAAAGAACCAAACCTTCTCTTCCTTTGATGATTTACTGGCCAACTCGGACACACCTGTGTTAGTTGACTTCTATGCAACATGGTGTGGTCCTTGTCAGTTCATGGTTCCTATTCTTGAACAAGTTAGTGCAGCACTGATTGACAAAGTCCAGGTGGTCAAGATTGACACCGAAAAATATCCTGCCATTGCTGATAAATACAGAATAGAGGCATTGCCTACATTCATCCTCTTCAAAGATGGAAAACCCCTTGACCGATTCGAAGGAGCTTTGGCTGCGCGTGAGCTCATCCAACGCATTGAAGATTCTCTGAAGGTTAAGCAATAA

Coding sequence (CDS)

ATGGCGGCCTCCTTTTCAACTTCACCTTATCCTATCCTCACCTCTCACCGCTCCAATCGCTTGCCTGCATACCATTCTTCTTCATCCAGCCTCTCTTTCTCCTCCTCTCTACACCTACCTCTTCAGCTTAGACGTTTTCCACTTGCAAACACTCGGATTTCACCTCCATCCTCCTCTCCATCCTTCCCTGTGGTCAAAGCAAAGAACCAAACCTTCTCTTCCTTTGATGATTTACTGGCCAACTCGGACACACCTGTGTTAGTTGACTTCTATGCAACATGGTGTGGTCCTTGTCAGTTCATGGTTCCTATTCTTGAACAAGTTAGTGCAGCACTGATTGACAAAGTCCAGGTGGTCAAGATTGACACCGAAAAATATCCTGCCATTGCTGATAAATACAGAATAGAGGCATTGCCTACATTCATCCTCTTCAAAGATGGAAAACCCCTTGACCGATTCGAAGGAGCTTTGGCTGCGCGTGAGCTCATCCAACGCATTGAAGATTCTCTGAAGGTTAAGCAATAA

Homology

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BLAST of CSPI06G02440 vs. Swiss-Prot
Match: TRXY1_ARATH (Thioredoxin Y1, chloroplastic OS=Arabidopsis thaliana GN=At1g76760 PE=2 SV=1)

HSP 1 Score: 187.2 bits (474), Expect = 1.5e-46
Identity = 102/172 (59.30%), Postives = 124/172 (72.09%), Query Frame = 1


Query: 4   SFSTSPYPILTSHRSNRLPAYHSSSSSLSFSSSLHLPLQLRRFPLANTRISPPSSSPSFP 63
           S S+S  P L S  S+ + A+ S S S     ++     +RR    + +    SS+    
Sbjct: 5   SLSSSTVPSLNSKESSGVSAFASRSIS-----AVKFQFPVRRVRTGDLKFPSLSSTTRCT 64

Query: 64  V--VKAKNQTFSSFDDLLANSDTPVLVDFYATWCGPCQFMVPILEQVSAALIDKVQVVKI 123
              ++AK QTF SF+DLL NSD PVLVD+YATWCGPCQFMVPIL +VS  L DK+QVVKI
Sbjct: 65  PRRIEAKKQTFDSFEDLLVNSDKPVLVDYYATWCGPCQFMVPILNEVSETLKDKIQVVKI 124

Query: 124 DTEKYPAIADKYRIEALPTFILFKDGKPLDRFEGALAARELIQRIEDSLKVK 174
           DTEKYP+IA+KY+IEALPTFILFKDG+P DRFEGAL A++LIQRIEDSLKVK
Sbjct: 125 DTEKYPSIANKYKIEALPTFILFKDGEPCDRFEGALTAKQLIQRIEDSLKVK 171

[Close]

BLAST of CSPI06G02440 vs. Swiss-Prot
Match: TRXY2_ARATH (Thioredoxin Y2, chloroplastic OS=Arabidopsis thaliana GN=At1g43560 PE=2 SV=1)

HSP 1 Score: 182.2 bits (461), Expect = 4.9e-45
Identity = 99/156 (63.46%), Postives = 116/156 (74.36%), Query Frame = 1


Query: 22  PAYHSSSSSLSFSSSLHLPLQLRRFPLANTRISPPSSSPSFP---VVKAKNQTFSSFDDL 81
           P   +S+S     SS+ LP Q+RRF      +  PSSS  F    V  AK QTF+SFDDL
Sbjct: 16  PESSNSASPSRTLSSVRLPSQIRRFG----SVQSPSSSTRFAPLTVRAAKKQTFNSFDDL 75

Query: 82  LANSDTPVLVDFYATWCGPCQFMVPILEQVSAALIDKVQVVKIDTEKYPAIADKYRIEAL 141
           L NSD PVLVDFYATWCGPCQ MVPIL +VS  L D + VVKIDTEKYP++A+KY+IEAL
Sbjct: 76  LQNSDKPVLVDFYATWCGPCQLMVPILNEVSETLKDIIAVVKIDTEKYPSLANKYQIEAL 135

Query: 142 PTFILFKDGKPLDRFEGALAARELIQRIEDSLKVKQ 175
           PTFILFKDGK  DRFEGAL A +L++RIE+SL+VKQ
Sbjct: 136 PTFILFKDGKLWDRFEGALPANQLVERIENSLQVKQ 167

[Close]

BLAST of CSPI06G02440 vs. Swiss-Prot
Match: TRXY_ORYSJ (Thioredoxin Y, chloroplastic OS=Oryza sativa subsp. japonica GN=Os01g0963400 PE=3 SV=2)

HSP 1 Score: 166.0 bits (419), Expect = 3.7e-40
Identity = 81/121 (66.94%), Postives = 100/121 (82.64%), Query Frame = 1


Query: 52  RISPPSSSPSFPVVKAKNQTFSSFDDLLANSDTPVLVDFYATWCGPCQFMVPILEQVSAA 111
           R + PS   +   V+AK QTFSSFD+LL  S+ PVLVDFYATWCGPCQ+MVPIL++VS  
Sbjct: 46  RAAAPSRRGATLRVQAKKQTFSSFDELLEKSEKPVLVDFYATWCGPCQYMVPILQEVSEK 105

Query: 112 LIDKVQVVKIDTEKYPAIADKYRIEALPTFILFKDGKPLDRFEGALAARELIQRIEDSLK 171
           L DK+QVVKIDTEKY +IA++Y+IEALPTFI+FK+GKP  RFEGAL A +LIQ+IE +L+
Sbjct: 106 LGDKIQVVKIDTEKYTSIANRYQIEALPTFIIFKNGKPCHRFEGALPANQLIQQIESALE 165

Query: 172 V 173
           V
Sbjct: 166 V 166

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BLAST of CSPI06G02440 vs. Swiss-Prot
Match: THIO1_SYNY3 (Thioredoxin-like protein slr0233 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=slr0233 PE=1 SV=1)

HSP 1 Score: 130.2 bits (326), Expect = 2.2e-29
Identity = 59/101 (58.42%), Postives = 79/101 (78.22%), Query Frame = 1


Query: 67  AKNQTFSSFDDLLANSDTPVLVDFYATWCGPCQFMVPILEQVSAALIDKVQVVKIDTEKY 126
           A  + F++F ++LA S  PVLVDFYATWCGPCQ M PILEQV + L  ++QVVKIDT+KY
Sbjct: 2   AVKKQFANFAEMLAGSPKPVLVDFYATWCGPCQMMAPILEQVGSHLRQQIQVVKIDTDKY 61

Query: 127 PAIADKYRIEALPTFILFKDGKPLDRFEGALAARELIQRIE 168
           PAIA +Y+I++LPT +LFK G+P+ R EG   A +LIQ+++
Sbjct: 62  PAIATQYQIQSLPTLVLFKQGQPVHRMEGVQQAAQLIQQLQ 102

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BLAST of CSPI06G02440 vs. Swiss-Prot
Match: THIO1_NOSS1 (Thioredoxin-1 OS=Nostoc sp. (strain PCC 7120 / UTEX 2576) GN=trxA PE=3 SV=2)

HSP 1 Score: 92.8 bits (229), Expect = 3.9e-18
Identity = 40/104 (38.46%), Postives = 68/104 (65.38%), Query Frame = 1


Query: 67  AKNQTFSSFDDLLANSDTPVLVDFYATWCGPCQFMVPILEQVSAALIDKVQVVKIDTEKY 126
           A   T S+F   + +SD PVLVDF+A WCGPC+ + P++++++     K++VVK++T++ 
Sbjct: 4   AAQVTDSTFKQEVLDSDVPVLVDFWAPWCGPCRMVAPVVDEIAQQYEGKIKVVKVNTDEN 63

Query: 127 PAIADKYRIEALPTFILFKDGKPLDRFEGALAARELIQRIEDSL 171
           P +A +Y I ++PT ++FK G+ +D   GA+    L Q +E  L
Sbjct: 64  PQVASQYGIRSIPTLMIFKGGQKVDMVVGAVPKTTLSQTLEKHL 107

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BLAST of CSPI06G02440 vs. TrEMBL
Match: A0A0A0K7X7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G014850 PE=4 SV=1)

HSP 1 Score: 340.1 bits (871), Expect = 1.6e-90
Identity = 174/174 (100.00%), Postives = 174/174 (100.00%), Query Frame = 1


Query: 1   MAASFSTSPYPILTSHRSNRLPAYHSSSSSLSFSSSLHLPLQLRRFPLANTRISPPSSSP 60
           MAASFSTSPYPILTSHRSNRLPAYHSSSSSLSFSSSLHLPLQLRRFPLANTRISPPSSSP
Sbjct: 1   MAASFSTSPYPILTSHRSNRLPAYHSSSSSLSFSSSLHLPLQLRRFPLANTRISPPSSSP 60

Query: 61  SFPVVKAKNQTFSSFDDLLANSDTPVLVDFYATWCGPCQFMVPILEQVSAALIDKVQVVK 120
           SFPVVKAKNQTFSSFDDLLANSDTPVLVDFYATWCGPCQFMVPILEQVSAALIDKVQVVK
Sbjct: 61  SFPVVKAKNQTFSSFDDLLANSDTPVLVDFYATWCGPCQFMVPILEQVSAALIDKVQVVK 120

Query: 121 IDTEKYPAIADKYRIEALPTFILFKDGKPLDRFEGALAARELIQRIEDSLKVKQ 175
           IDTEKYPAIADKYRIEALPTFILFKDGKPLDRFEGALAARELIQRIEDSLKVKQ
Sbjct: 121 IDTEKYPAIADKYRIEALPTFILFKDGKPLDRFEGALAARELIQRIEDSLKVKQ 174

[Close]

BLAST of CSPI06G02440 vs. TrEMBL
Match: D7SRD7_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0072g00400 PE=4 SV=1)

HSP 1 Score: 215.7 bits (548), Expect = 4.5e-53
Identity = 118/175 (67.43%), Postives = 131/175 (74.86%), Query Frame = 1


Query: 1   MAASFSTSPYPILTSHRSNRLPAYHSSSSSLSFSSS-LHLPLQLRRFPLANTRISPPSSS 60
           MA S + S    L S R   L    SS SS  FSSS L  P QLR   + N  IS PS  
Sbjct: 1   MATSLTFSTVRALNSQRPTPLAFSSSSPSSKLFSSSPLQFPRQLRPIRIGNNGISSPSRP 60

Query: 61  PSFPVVKAKNQTFSSFDDLLANSDTPVLVDFYATWCGPCQFMVPILEQVSAALIDKVQVV 120
            + PVV+AK QTFSS D+LLANS+ PVLVDFYATWCGPCQFMVPIL +V A+L DK+QVV
Sbjct: 61  RTLPVVEAKKQTFSSLDELLANSEKPVLVDFYATWCGPCQFMVPILNEVGASLKDKIQVV 120

Query: 121 KIDTEKYPAIADKYRIEALPTFILFKDGKPLDRFEGALAARELIQRIEDSLKVKQ 175
           KIDTEKYP+IADKYRIEALPTFI+FKDGKP DRFEGAL A +LIQRIE +LKVKQ
Sbjct: 121 KIDTEKYPSIADKYRIEALPTFIIFKDGKPYDRFEGALTADQLIQRIETTLKVKQ 175

[Close]

BLAST of CSPI06G02440 vs. TrEMBL
Match: A0A151S6Z7_CAJCA (Thioredoxin-like protein slr0233 family OS=Cajanus cajan GN=KK1_027620 PE=4 SV=1)

HSP 1 Score: 212.2 bits (539), Expect = 5.0e-52
Identity = 118/176 (67.05%), Postives = 135/176 (76.70%), Query Frame = 1


Query: 1   MAASFSTSP-YPILTSHRSNRLPAYHSSSSSLSFSSSLHLPLQLRRFPLANTRISPPSSS 60
           MA S STS   P L S RS R  +  +SSSSL F      P + R  P+   R+ PPSS 
Sbjct: 1   MALSVSTSSAIPSLNSERSTRFAS--ASSSSLQF------PFRTRLLPITTPRL-PPSSR 60

Query: 61  PSF-PVVKAKNQTFSSFDDLLANSDTPVLVDFYATWCGPCQFMVPILEQVSAALIDKVQV 120
           P F P+V+AK QTF+SFDDLLANS+ PVLVDFYATWCGPCQFMVPIL++VS  L DK+QV
Sbjct: 61  PRFLPLVQAKKQTFNSFDDLLANSEKPVLVDFYATWCGPCQFMVPILDEVSTRLKDKIQV 120

Query: 121 VKIDTEKYPAIADKYRIEALPTFILFKDGKPLDRFEGALAARELIQRIEDSLKVKQ 175
           VKIDTEKYP+IADKYRIEALPTFI+FKDG+P DRFEGAL A +LI+RIE  LKVKQ
Sbjct: 121 VKIDTEKYPSIADKYRIEALPTFIMFKDGEPFDRFEGALTADQLIERIEAGLKVKQ 167

[Close]

BLAST of CSPI06G02440 vs. TrEMBL
Match: W9S850_9ROSA (Thioredoxin Y1 OS=Morus notabilis GN=L484_017852 PE=4 SV=1)

HSP 1 Score: 211.1 bits (536), Expect = 1.1e-51
Identity = 118/179 (65.92%), Postives = 132/179 (73.74%), Query Frame = 1


Query: 1   MAASFSTSPYPILTSHRSNRLPAYHSSSSS-----LSFSSSLHLPLQLRRFPLANTRISP 60
           MA S STS  P L S RSNR      SSSS      S+SSSL  PL++    L+    S 
Sbjct: 1   MAVSVSTSSIPSLNSDRSNRFATSAISSSSPGLRLSSYSSSLLFPLRIGTGGLS----SS 60

Query: 61  PSSSPSFPVVKAKNQTFSSFDDLLANSDTPVLVDFYATWCGPCQFMVPILEQVSAALIDK 120
                  PVVKAK QTFSSFDDLLA SD PVLVDFYATWCGPCQFMVPIL +VSA+L DK
Sbjct: 61  SRRKRILPVVKAKKQTFSSFDDLLAKSDKPVLVDFYATWCGPCQFMVPILNEVSASLNDK 120

Query: 121 VQVVKIDTEKYPAIADKYRIEALPTFILFKDGKPLDRFEGALAARELIQRIEDSLKVKQ 175
           +QVVKIDTEKYP+IA+KY IEALPTFI+FKD KP DRFEGA+ A +LIQRIED+LK+KQ
Sbjct: 121 IQVVKIDTEKYPSIANKYNIEALPTFIIFKDAKPFDRFEGAMTAAQLIQRIEDALKIKQ 175

[Close]

BLAST of CSPI06G02440 vs. TrEMBL
Match: M5VN05_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012274mg PE=4 SV=1)

HSP 1 Score: 209.5 bits (532), Expect = 3.2e-51
Identity = 111/177 (62.71%), Postives = 132/177 (74.58%), Query Frame = 1


Query: 1   MAASFSTSPYPILTSHRSNRLPAYHSSSSS---LSFSSSLHLPLQLRRFPLANTRISPPS 60
           MA S + S      S R+ R+ A  SSS+S   LS SSSL +P+QLR   +  + +S PS
Sbjct: 1   MAVSVTASTISSFRSDRTTRIAATSSSSASCSKLSSSSSLQVPVQLRCVRIGRSGVSAPS 60

Query: 61  SSPSFPVVKAKNQTFSSFDDLLANSDTPVLVDFYATWCGPCQFMVPILEQVSAALIDKVQ 120
                PVV AK QTFSSF+DLLA SD P+LVDFYATWCGPCQFM PIL +VS  L DK+Q
Sbjct: 61  RPRILPVVAAKKQTFSSFEDLLATSDKPILVDFYATWCGPCQFMAPILNEVSITLNDKIQ 120

Query: 121 VVKIDTEKYPAIADKYRIEALPTFILFKDGKPLDRFEGALAARELIQRIEDSLKVKQ 175
           VVKIDTEKYP+IADKY I+ALPTFI+FKDG+P DRFEGAL A +L++RIE +LKVKQ
Sbjct: 121 VVKIDTEKYPSIADKYNIQALPTFIIFKDGEPYDRFEGALTADQLVERIETTLKVKQ 177

[Close]

BLAST of CSPI06G02440 vs. TAIR10
Match: AT1G76760.1 (AT1G76760.1 thioredoxin Y1)

HSP 1 Score: 187.2 bits (474), Expect = 8.7e-48
Identity = 102/172 (59.30%), Postives = 124/172 (72.09%), Query Frame = 1


Query: 4   SFSTSPYPILTSHRSNRLPAYHSSSSSLSFSSSLHLPLQLRRFPLANTRISPPSSSPSFP 63
           S S+S  P L S  S+ + A+ S S S     ++     +RR    + +    SS+    
Sbjct: 5   SLSSSTVPSLNSKESSGVSAFASRSIS-----AVKFQFPVRRVRTGDLKFPSLSSTTRCT 64

Query: 64  V--VKAKNQTFSSFDDLLANSDTPVLVDFYATWCGPCQFMVPILEQVSAALIDKVQVVKI 123
              ++AK QTF SF+DLL NSD PVLVD+YATWCGPCQFMVPIL +VS  L DK+QVVKI
Sbjct: 65  PRRIEAKKQTFDSFEDLLVNSDKPVLVDYYATWCGPCQFMVPILNEVSETLKDKIQVVKI 124

Query: 124 DTEKYPAIADKYRIEALPTFILFKDGKPLDRFEGALAARELIQRIEDSLKVK 174
           DTEKYP+IA+KY+IEALPTFILFKDG+P DRFEGAL A++LIQRIEDSLKVK
Sbjct: 125 DTEKYPSIANKYKIEALPTFILFKDGEPCDRFEGALTAKQLIQRIEDSLKVK 171

[Close]

BLAST of CSPI06G02440 vs. TAIR10
Match: AT1G43560.1 (AT1G43560.1 thioredoxin Y2)

HSP 1 Score: 182.2 bits (461), Expect = 2.8e-46
Identity = 99/156 (63.46%), Postives = 116/156 (74.36%), Query Frame = 1


Query: 22  PAYHSSSSSLSFSSSLHLPLQLRRFPLANTRISPPSSSPSFP---VVKAKNQTFSSFDDL 81
           P   +S+S     SS+ LP Q+RRF      +  PSSS  F    V  AK QTF+SFDDL
Sbjct: 16  PESSNSASPSRTLSSVRLPSQIRRFG----SVQSPSSSTRFAPLTVRAAKKQTFNSFDDL 75

Query: 82  LANSDTPVLVDFYATWCGPCQFMVPILEQVSAALIDKVQVVKIDTEKYPAIADKYRIEAL 141
           L NSD PVLVDFYATWCGPCQ MVPIL +VS  L D + VVKIDTEKYP++A+KY+IEAL
Sbjct: 76  LQNSDKPVLVDFYATWCGPCQLMVPILNEVSETLKDIIAVVKIDTEKYPSLANKYQIEAL 135

Query: 142 PTFILFKDGKPLDRFEGALAARELIQRIEDSLKVKQ 175
           PTFILFKDGK  DRFEGAL A +L++RIE+SL+VKQ
Sbjct: 136 PTFILFKDGKLWDRFEGALPANQLVERIENSLQVKQ 167

[Close]

BLAST of CSPI06G02440 vs. TAIR10
Match: AT1G50320.1 (AT1G50320.1 thioredoxin X)

HSP 1 Score: 85.1 bits (209), Expect = 4.6e-17
Identity = 43/100 (43.00%), Postives = 61/100 (61.00%), Query Frame = 1


Query: 73  SSFDDLLANSDTPVLVDFYATWCGPCQFMVPILEQVSAALIDKVQVVKIDTEKYPAIADK 132
           S F   +  S  PVLV+F ATWCGPC+ + P +E +S    DK+ +VKID +  P +  +
Sbjct: 77  SEFSSTVLESAQPVLVEFVATWCGPCKLIYPAMEALSQEYGDKLTIVKIDHDANPKLIAE 136

Query: 133 YRIEALPTFILFKDGK--PLDRFEGALAARELIQRIEDSL 171
           +++  LP FILFKDGK  P  R EGA+   +L + I+  L
Sbjct: 137 FKVYGLPHFILFKDGKEVPGSRREGAITKAKLKEYIDGLL 176

[Close]

BLAST of CSPI06G02440 vs. TAIR10
Match: AT3G15360.1 (AT3G15360.1 thioredoxin M-type 4)

HSP 1 Score: 82.8 bits (203), Expect = 2.3e-16
Identity = 41/116 (35.34%), Postives = 68/116 (58.62%), Query Frame = 1


Query: 52  RISPPSSSPSFPVVKAKNQTFSSFDDLLANSDTPVLVDFYATWCGPCQFMVPILEQVSAA 111
           RI+  +   +   V+  N + S +   +  SD PVLV+F+A WCGPC+ + PI++Q++  
Sbjct: 73  RIACEAQDTTAAAVEVPNLSDSEWQTKVLESDVPVLVEFWAPWCGPCRMIHPIVDQLAKD 132

Query: 112 LIDKVQVVKIDTEKYPAIADKYRIEALPTFILFKDGKPLDRFEGALAARELIQRIE 168
              K +  KI+T++ P  A++Y I ++PT I+FK G+  D   GA+    L + IE
Sbjct: 133 FAGKFKFYKINTDESPNTANRYGIRSVPTVIIFKGGEKKDSIIGAVPRETLEKTIE 188

[Close]

BLAST of CSPI06G02440 vs. TAIR10
Match: AT1G03680.1 (AT1G03680.1 thioredoxin M-type 1)

HSP 1 Score: 72.8 bits (177), Expect = 2.4e-13
Identity = 44/144 (30.56%), Postives = 78/144 (54.17%), Query Frame = 1


Query: 27  SSSSLSFSSSLHLPLQLRRFPLANTRISPPSSSPSFPVVKAKNQTFSSFDDLLANSDTPV 86
           S SSLS +S +    +LRR  +   +     ++   PVV       S++D L+  +D PV
Sbjct: 48  SLSSLSKNSRVS---RLRRGVICEAQ----DTATGIPVVND-----STWDSLVLKADEPV 107

Query: 87  LVDFYATWCGPCQFMVPILEQVSAALIDKVQVVKIDTEKYPAIADKYRIEALPTFILFKD 146
            VDF+A WCGPC+ + PI+ +++     + +  K++T++ PA   +Y + ++PT ++F +
Sbjct: 108 FVDFWAPWCGPCKMIDPIVNELAQKYAGQFKFYKLNTDESPATPGQYGVRSIPTIMIFVN 167

Query: 147 GKPLDRFEGALAARELIQRIEDSL 171
           G+  D   GA++   L   I   L
Sbjct: 168 GEKKDTIIGAVSKDTLATSINKFL 179

[Close]

BLAST of CSPI06G02440 vs. NCBI nr
Match: gi|449441218|ref|XP_004138379.1| (PREDICTED: thioredoxin Y1, chloroplastic [Cucumis sativus])

HSP 1 Score: 340.1 bits (871), Expect = 2.3e-90
Identity = 174/174 (100.00%), Postives = 174/174 (100.00%), Query Frame = 1


Query: 1   MAASFSTSPYPILTSHRSNRLPAYHSSSSSLSFSSSLHLPLQLRRFPLANTRISPPSSSP 60
           MAASFSTSPYPILTSHRSNRLPAYHSSSSSLSFSSSLHLPLQLRRFPLANTRISPPSSSP
Sbjct: 1   MAASFSTSPYPILTSHRSNRLPAYHSSSSSLSFSSSLHLPLQLRRFPLANTRISPPSSSP 60

Query: 61  SFPVVKAKNQTFSSFDDLLANSDTPVLVDFYATWCGPCQFMVPILEQVSAALIDKVQVVK 120
           SFPVVKAKNQTFSSFDDLLANSDTPVLVDFYATWCGPCQFMVPILEQVSAALIDKVQVVK
Sbjct: 61  SFPVVKAKNQTFSSFDDLLANSDTPVLVDFYATWCGPCQFMVPILEQVSAALIDKVQVVK 120

Query: 121 IDTEKYPAIADKYRIEALPTFILFKDGKPLDRFEGALAARELIQRIEDSLKVKQ 175
           IDTEKYPAIADKYRIEALPTFILFKDGKPLDRFEGALAARELIQRIEDSLKVKQ
Sbjct: 121 IDTEKYPAIADKYRIEALPTFILFKDGKPLDRFEGALAARELIQRIEDSLKVKQ 174

[Close]

BLAST of CSPI06G02440 vs. NCBI nr
Match: gi|659126232|ref|XP_008463079.1| (PREDICTED: thioredoxin Y1, chloroplastic [Cucumis melo])

HSP 1 Score: 316.2 bits (809), Expect = 3.5e-83
Identity = 162/174 (93.10%), Postives = 167/174 (95.98%), Query Frame = 1


Query: 1   MAASFSTSPYPILTSHRSNRLPAYHSSSSSLSFSSSLHLPLQLRRFPLANTRISPPSSSP 60
           MAASFSTSPYP+LTSHRSNRLPAYHSSSS+LS SSSLHLPLQLRRF L NTRISPPS S 
Sbjct: 1   MAASFSTSPYPLLTSHRSNRLPAYHSSSSALSSSSSLHLPLQLRRFRLGNTRISPPSPSR 60

Query: 61  SFPVVKAKNQTFSSFDDLLANSDTPVLVDFYATWCGPCQFMVPILEQVSAALIDKVQVVK 120
           + P+VKAKNQTFSSFDDLLANSD PVLVDFYATWCGPCQFMVPILE+VSAALIDKVQVVK
Sbjct: 61  TLPLVKAKNQTFSSFDDLLANSDKPVLVDFYATWCGPCQFMVPILEKVSAALIDKVQVVK 120

Query: 121 IDTEKYPAIADKYRIEALPTFILFKDGKPLDRFEGALAARELIQRIEDSLKVKQ 175
           IDTEKYPAIADKYRIEALPTFILFKDGKPLDRFEGALAARELIQRIEDSLKVKQ
Sbjct: 121 IDTEKYPAIADKYRIEALPTFILFKDGKPLDRFEGALAARELIQRIEDSLKVKQ 174

[Close]

BLAST of CSPI06G02440 vs. NCBI nr
Match: gi|225460644|ref|XP_002266350.1| (PREDICTED: thioredoxin Y1, chloroplastic [Vitis vinifera])

HSP 1 Score: 215.7 bits (548), Expect = 6.5e-53
Identity = 118/175 (67.43%), Postives = 131/175 (74.86%), Query Frame = 1


Query: 1   MAASFSTSPYPILTSHRSNRLPAYHSSSSSLSFSSS-LHLPLQLRRFPLANTRISPPSSS 60
           MA S + S    L S R   L    SS SS  FSSS L  P QLR   + N  IS PS  
Sbjct: 1   MATSLTFSTVRALNSQRPTPLAFSSSSPSSKLFSSSPLQFPRQLRPIRIGNNGISSPSRP 60

Query: 61  PSFPVVKAKNQTFSSFDDLLANSDTPVLVDFYATWCGPCQFMVPILEQVSAALIDKVQVV 120
            + PVV+AK QTFSS D+LLANS+ PVLVDFYATWCGPCQFMVPIL +V A+L DK+QVV
Sbjct: 61  RTLPVVEAKKQTFSSLDELLANSEKPVLVDFYATWCGPCQFMVPILNEVGASLKDKIQVV 120

Query: 121 KIDTEKYPAIADKYRIEALPTFILFKDGKPLDRFEGALAARELIQRIEDSLKVKQ 175
           KIDTEKYP+IADKYRIEALPTFI+FKDGKP DRFEGAL A +LIQRIE +LKVKQ
Sbjct: 121 KIDTEKYPSIADKYRIEALPTFIIFKDGKPYDRFEGALTADQLIQRIETTLKVKQ 175

[Close]

BLAST of CSPI06G02440 vs. NCBI nr
Match: gi|1012339330|gb|KYP50564.1| (Thioredoxin-like protein slr0233 family [Cajanus cajan])

HSP 1 Score: 212.2 bits (539), Expect = 7.1e-52
Identity = 118/176 (67.05%), Postives = 135/176 (76.70%), Query Frame = 1


Query: 1   MAASFSTSP-YPILTSHRSNRLPAYHSSSSSLSFSSSLHLPLQLRRFPLANTRISPPSSS 60
           MA S STS   P L S RS R  +  +SSSSL F      P + R  P+   R+ PPSS 
Sbjct: 1   MALSVSTSSAIPSLNSERSTRFAS--ASSSSLQF------PFRTRLLPITTPRL-PPSSR 60

Query: 61  PSF-PVVKAKNQTFSSFDDLLANSDTPVLVDFYATWCGPCQFMVPILEQVSAALIDKVQV 120
           P F P+V+AK QTF+SFDDLLANS+ PVLVDFYATWCGPCQFMVPIL++VS  L DK+QV
Sbjct: 61  PRFLPLVQAKKQTFNSFDDLLANSEKPVLVDFYATWCGPCQFMVPILDEVSTRLKDKIQV 120

Query: 121 VKIDTEKYPAIADKYRIEALPTFILFKDGKPLDRFEGALAARELIQRIEDSLKVKQ 175
           VKIDTEKYP+IADKYRIEALPTFI+FKDG+P DRFEGAL A +LI+RIE  LKVKQ
Sbjct: 121 VKIDTEKYPSIADKYRIEALPTFIMFKDGEPFDRFEGALTADQLIERIEAGLKVKQ 167

[Close]

BLAST of CSPI06G02440 vs. NCBI nr
Match: gi|1009138244|ref|XP_015886482.1| (PREDICTED: thioredoxin Y1, chloroplastic-like [Ziziphus jujuba])

HSP 1 Score: 212.2 bits (539), Expect = 7.1e-52
Identity = 112/171 (65.50%), Postives = 130/171 (76.02%), Query Frame = 1


Query: 1   MAASFSTSPYPILTSHRSNRLPAYHSSSSSLSFSSSLHLPLQLRRFPLANTRISPPSSSP 60
           MA + S    P L+S R+  L A  S SS+LS +SSL  P+QLRRF +    IS PS   
Sbjct: 1   MAVTVSAFTIPSLSSDRTTFLAASSSHSSALSSASSLQFPVQLRRFRIGTKGISAPSRPR 60

Query: 61  SFPVVKAKNQTFSSFDDLLANSDTPVLVDFYATWCGPCQFMVPILEQVSAALIDKVQVVK 120
             P+V+A  QTFS+ DDLLA ++ PVLVDFYATWCGPCQFMVPIL +V+A L DK+QVVK
Sbjct: 61  ILPLVEATKQTFSNLDDLLAKAEKPVLVDFYATWCGPCQFMVPILNEVNAKLKDKIQVVK 120

Query: 121 IDTEKYPAIADKYRIEALPTFILFKDGKPLDRFEGALAARELIQRIEDSLK 172
           IDTEKYP+IADKYRIEALPTFILFKDG P DRFEGA  A +LIQRIED+LK
Sbjct: 121 IDTEKYPSIADKYRIEALPTFILFKDGVPYDRFEGAFTADKLIQRIEDALK 171

The following BLAST results are available for this feature:

BLAST of CSPI06G02440 vs. Swiss-Prot


Match Name	E-value	Identity	Description
TRXY1_ARATH	1.5e-46	59.30	Thioredoxin Y1, chloroplastic OS=Arabidopsis thaliana GN=At1g76760 PE=2 SV=1	[more]
TRXY2_ARATH	4.9e-45	63.46	Thioredoxin Y2, chloroplastic OS=Arabidopsis thaliana GN=At1g43560 PE=2 SV=1	[more]
TRXY_ORYSJ	3.7e-40	66.94	Thioredoxin Y, chloroplastic OS=Oryza sativa subsp. japonica GN=Os01g0963400 PE=...	[more]
THIO1_SYNY3	2.2e-29	58.42	Thioredoxin-like protein slr0233 OS=Synechocystis sp. (strain PCC 6803 / Kazusa)...	[more]
THIO1_NOSS1	3.9e-18	38.46	Thioredoxin-1 OS=Nostoc sp. (strain PCC 7120 / UTEX 2576) GN=trxA PE=3 SV=2	[more]

BLAST of CSPI06G02440 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K7X7_CUCSA	1.6e-90	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G014850 PE=4 SV=1	[more]
D7SRD7_VITVI	4.5e-53	67.43	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0072g00400 PE=4 SV=...	[more]
A0A151S6Z7_CAJCA	5.0e-52	67.05	Thioredoxin-like protein slr0233 family OS=Cajanus cajan GN=KK1_027620 PE=4 SV=1	[more]
W9S850_9ROSA	1.1e-51	65.92	Thioredoxin Y1 OS=Morus notabilis GN=L484_017852 PE=4 SV=1	[more]
M5VN05_PRUPE	3.2e-51	62.71	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012274mg PE=4 SV=1	[more]

BLAST of CSPI06G02440 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G76760.1	8.7e-48	59.30	thioredoxin Y1	[more]
AT1G43560.1	2.8e-46	63.46	thioredoxin Y2	[more]
AT1G50320.1	4.6e-17	43.00	thioredoxin X	[more]
AT3G15360.1	2.3e-16	35.34	thioredoxin M-type 4	[more]
AT1G03680.1	2.4e-13	30.56	thioredoxin M-type 1	[more]

BLAST of CSPI06G02440 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449441218\|ref\|XP_004138379.1\|	2.3e-90	100.00	PREDICTED: thioredoxin Y1, chloroplastic [Cucumis sativus]	[more]
gi\|659126232\|ref\|XP_008463079.1\|	3.5e-83	93.10	PREDICTED: thioredoxin Y1, chloroplastic [Cucumis melo]	[more]
gi\|225460644\|ref\|XP_002266350.1\|	6.5e-53	67.43	PREDICTED: thioredoxin Y1, chloroplastic [Vitis vinifera]	[more]
gi\|1012339330\|gb\|KYP50564.1\|	7.1e-52	67.05	Thioredoxin-like protein slr0233 family [Cajanus cajan]	[more]
gi\|1009138244\|ref\|XP_015886482.1\|	7.1e-52	65.50	PREDICTED: thioredoxin Y1, chloroplastic-like [Ziziphus jujuba]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR005746	Thioredoxin
IPR012336	Thioredoxin-like_fold
IPR013766	Thioredoxin_domain
IPR017937	Thioredoxin_CS

Vocabulary: **Biological Process**
Term	Definition
GO:0006662	glycerol ether metabolic process
GO:0045454	cell redox homeostasis

Vocabulary: **Molecular Function**
Term	Definition
GO:0015035	protein disulfide oxidoreductase activity

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045454	cell redox homeostasis
biological_process	GO:0006662	glycerol ether metabolic process
biological_process	GO:0055114	oxidation-reduction process
biological_process	GO:0043085	positive regulation of catalytic activity
biological_process	GO:0006457	protein folding
biological_process	GO:0034599	cellular response to oxidative stress
cellular_component	GO:0005623	cell
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0008047	enzyme activator activity
molecular_function	GO:0016671	oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor
molecular_function	GO:0015035	protein disulfide oxidoreductase activity
molecular_function	GO:0016853	isomerase activity
molecular_function	GO:0003756	protein disulfide isomerase activity
molecular_function	GO:0047134	protein-disulfide reductase activity
molecular_function	GO:0004791	thioredoxin-disulfide reductase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI06G02440.1	CSPI06G02440.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005746	Thioredoxin	PANTHER	PTHR10438	THIOREDOXIN	coord: 1..171 score: 2.3
IPR005746	Thioredoxin	TIGRFAMs	TIGR01068	TIGR01068	coord: 72..168 score: 4.2
IPR012336	Thioredoxin-like fold	GENE3D	G3DSA:3.40.30.10		coord: 71..170 score: 8.4
IPR012336	Thioredoxin-like fold	unknown	SSF52833	Thioredoxin-like	coord: 71..171 score: 9.62
IPR013766	Thioredoxin domain	PFAM	PF00085	Thioredoxin	coord: 71..167 score: 1.4
IPR013766	Thioredoxin domain	PROFILE	PS51352	THIOREDOXIN_2	coord: 53..171 score: 16
IPR017937	Thioredoxin, conserved site	PROSITE	PS00194	THIOREDOXIN_1	coord: 87..105 scor
None	No IPR available	PRINTS	PR00421	THIOREDOXIN	coord: 134..145 score: 3.2E-7coord: 94..103 score: 3.2E-7coord: 86..94 score: 3.
None	No IPR available	PANTHER	PTHR10438:SF280	THIOREDOXIN Y1, CHLOROPLASTIC-RELATED	coord: 1..171 score: 2.3

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CSPI06G02440	Csa6G014850	Cucumber (Chinese Long) v2	cpicuB314
CSPI06G02440	MELO3C025023	Melon (DHL92) v3.5.1	cpimeB468
CSPI06G02440	ClCG08G002220	Watermelon (Charleston Gray)	cpiwcgB526
CSPI06G02440	Lsi08G002120	Bottle gourd (USVL1VR-Ls)	cpilsiB479
CSPI06G02440	MELO3C025023.2	Melon (DHL92) v3.6.1	cpimedB464
CSPI06G02440	Bhi04G001790	Wax gourd	cpiwgoB594
CSPI06G02440	Cucsa.325740	Cucumber (Gy14) v1	cgycpiB491
CSPI06G02440	CmaCh01G009060	Cucurbita maxima (Rimu)	cmacpiB488
CSPI06G02440	CmaCh09G011740	Cucurbita maxima (Rimu)	cmacpiB035
CSPI06G02440	CmoCh01G009460	Cucurbita moschata (Rifu)	cmocpiB477
CSPI06G02440	CmoCh09G011810	Cucurbita moschata (Rifu)	cmocpiB025
CSPI06G02440	Cp4.1LG02g09430	Cucurbita pepo (Zucchini)	cpecpiB585
CSPI06G02440	CsGy6G002480	Cucumber (Gy14) v2	cgybcpiB288

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CSPI06G02440	Cucumber (Chinese Long) v3	cpicucB364
CSPI06G02440	Watermelon (97103) v2	cpiwmbB516