CmoCh09G011780 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below.AAGACATCAAATTTAGAAATACAATACAATCAACTAGAAACCACCATGTCGGAGGAGAACCACCAGCGCCACCACCACCACCACGGCCTTTTCCACCGCCACAAGGAGGAGGAAGAAAATATCCCCTCCGAAACCACCCCATATTCCGAATCTCAATTCTCCAAAAATTCCACTTATTCTTCTGACCTCTCTGAAAATAAAACCGCCAGTTATGGCGGTGGCTACGGTGTATCAAAAAATAAGGCCGACGAATATGACGGTGGAGGTTACGGTGAGTTAAAAGATATTATAATAATTAGTTATAAAAGATTTATAAGATATTCAGATAATATTTTTTCATTTAATTGATAGTGTATTTTATTTTATTCTTTAATATTTTCTTTTATATATATATATATATATTTTTTCTTTACATTAATGAAAATTGGACTTTAGATTTGATAGTCACTTCTATTTCTCATTCTTAACAGAAGATAAAGCAAGTGAATACGGTGGTGACTTTGGTAAGTCCGGAAATAAGGTTGCCGCTGAGTACGGTGGTGGCTATAGTGAGTCAGAAAATAAGGCCACCGAGTACGGTGGTGGGTACGGCGAGTCGGAAGAGAAGGTAGGCGAATATGGTGGAGGCTTCGGTAAGTCTGAAAATAAAGTCGCCGCCGCGTACGGCGGCTATAGTGAGTCGGGAAATAAGGCTACTGAGTACGAGGGTGGGTTCGGTGAGTCGGAAGATAAGGGAGACGAATACAGTGGTGGCTATGGTAAGTCTGGAAAAAAGGCTGCCGCTGAGTACGGGGGTGGCTATGGTGAGTCGGAAAATAAGGACACCGAGTACGGTGGTGGATACGGTGAGATAGAAGGTAAGTCTGGACATAAATCCGGGGAGTACGGTGGTGGGTACGGCGGGTTGGAAGATCAGGGCGGCGAGTACGGTGGTGGGGATAGGACAGATAACAAAAAGGAAGTGGAACACCACAAGCACCTTGAGCACCTCGGCGAGATCGGTGCTGCAGCCGCTGGTGCCTTCGCCTTGGTATATAATATATTTAATATATAA AAGACATCAAATTTAGAAATACAATACAATCAACTAGAAACCACCATGTCGGAGGAGAACCACCAGCGCCACCACCACCACCACGGCCTTTTCCACCGCCACAAGGAGGAGGAAGAAAATATCCCCTCCGAAACCACCCCATATTCCGAATCTCAATTCTCCAAAAATTCCACTTATTCTTCTGACCTCTCTGAAAATAAAACCGCCAGTTATGGCGGTGGCTACGGTGTATCAAAAAATAAGGCCGACGAATATGACGGTGGAGGTTACGAAAATAAGGCCACCGAGTACGGTGGTGGGTACGGCGAGTCGGAAGAGAAGGTAGGCGAATATGGTGGAGGCTTCGGTAAGTCTGAAAATAAAGTCGCCGCCGCGTACGGCGGCTATAGTGAGTCGGGAAATAAGGCTACTGAGTACGAGGGTGGGTTCGGTGAGTCGGAAGATAAGGGAGACGAATACAGTGGTGGCTATGGTAAGTCTGGAAAAAAGGCTGCCGCTGAGTACGGGGGTGGCTATGGTGAGTCGGAAAATAAGGACACCGAGTACGGTGGTGGATACGGTGAGATAGAAGGTAAGTCTGGACATAAATCCGGGGAGTACGGTGGTGGGTACGGCGGGTTGGAAGATCAGGGCGGCGAGTACGGTGGTGGGGATAGGACAGATAACAAAAAGGAAGTGGAACACCACAAGCACCTTGAGCACCTCGGCGAGATCGGTGCTGCAGCCGCTGGTGCCTTCGCCTTGGTATATAATATATTTAATATATAA ATGTCGGAGGAGAACCACCAGCGCCACCACCACCACCACGGCCTTTTCCACCGCCACAAGGAGGAGGAAGAAAATATCCCCTCCGAAACCACCCCATATTCCGAATCTCAATTCTCCAAAAATTCCACTTATTCTTCTGACCTCTCTGAAAATAAAACCGCCAGTTATGGCGGTGGCTACGGTGTATCAAAAAATAAGGCCGACGAATATGACGGTGGAGGTTACGAAAATAAGGCCACCGAGTACGGTGGTGGGTACGGCGAGTCGGAAGAGAAGGTAGGCGAATATGGTGGAGGCTTCGGTAAGTCTGAAAATAAAGTCGCCGCCGCGTACGGCGGCTATAGTGAGTCGGGAAATAAGGCTACTGAGTACGAGGGTGGGTTCGGTGAGTCGGAAGATAAGGGAGACGAATACAGTGGTGGCTATGGTAAGTCTGGAAAAAAGGCTGCCGCTGAGTACGGGGGTGGCTATGGTGAGTCGGAAAATAAGGACACCGAGTACGGTGGTGGATACGGTGAGATAGAAGGTAAGTCTGGACATAAATCCGGGGAGTACGGTGGTGGGTACGGCGGGTTGGAAGATCAGGGCGGCGAGTACGGTGGTGGGGATAGGACAGATAACAAAAAGGAAGTGGAACACCACAAGCACCTTGAGCACCTCGGCGAGATCGGTGCTGCAGCCGCTGGTGCCTTCGCCTTGGTATATAATATATTTAATATATAA
BLAST of CmoCh09G011780 vs. TrEMBL
Match: A0A0A0K8U6_CUCSA (Abscisic stress ripening-like protein OS=Cucumis sativus GN=Csa_6G014830 PE=4 SV=1) HSP 1 Score: 201.4 bits (511), Expect = 1.2e-48 Identity = 143/252 (56.75%), Postives = 162/252 (64.29%), Query Frame = 1
BLAST of CmoCh09G011780 vs. TrEMBL
Match: K4FAV1_9ROSA (Abscisic stress ripening protein OS=Ziziphus mauritiana GN=Asr PE=2 SV=1) HSP 1 Score: 75.5 bits (184), Expect = 1.0e-10 Identity = 92/237 (38.82%), Postives = 116/237 (48.95%), Query Frame = 1
BLAST of CmoCh09G011780 vs. TrEMBL
Match: G7IBZ5_MEDTR (ABA/WDS induced protein OS=Medicago truncatula GN=MTR_1g098680 PE=4 SV=1) HSP 1 Score: 72.8 bits (177), Expect = 6.5e-10 Identity = 90/244 (36.89%), Postives = 113/244 (46.31%), Query Frame = 1
BLAST of CmoCh09G011780 vs. TrEMBL
Match: Q2TUW1_SOYBN (Abscisic stress ripening-like protein OS=Glycine max GN=GLYMA_20G167500 PE=2 SV=1) HSP 1 Score: 71.6 bits (174), Expect = 1.4e-09 Identity = 85/229 (37.12%), Postives = 106/229 (46.29%), Query Frame = 1
BLAST of CmoCh09G011780 vs. TrEMBL
Match: C6T3F7_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1) HSP 1 Score: 70.1 bits (170), Expect = 4.2e-09 Identity = 85/229 (37.12%), Postives = 105/229 (45.85%), Query Frame = 1
BLAST of CmoCh09G011780 vs. NCBI nr
Match: gi|449441220|ref|XP_004138380.1| (PREDICTED: glycine-rich cell wall structural protein 1.8-like [Cucumis sativus]) HSP 1 Score: 201.4 bits (511), Expect = 1.7e-48 Identity = 143/252 (56.75%), Postives = 162/252 (64.29%), Query Frame = 1
BLAST of CmoCh09G011780 vs. NCBI nr
Match: gi|659126238|ref|XP_008463082.1| (PREDICTED: keratin, type I cytoskeletal 9-like [Cucumis melo]) HSP 1 Score: 181.4 bits (459), Expect = 1.8e-42 Identity = 131/243 (53.91%), Postives = 143/243 (58.85%), Query Frame = 1
BLAST of CmoCh09G011780 vs. NCBI nr
Match: gi|502118982|ref|XP_004496466.1| (PREDICTED: keratin, type I cytoskeletal 10-like [Cicer arietinum]) HSP 1 Score: 82.8 bits (203), Expect = 9.0e-13 Identity = 96/242 (39.67%), Postives = 124/242 (51.24%), Query Frame = 1
BLAST of CmoCh09G011780 vs. NCBI nr
Match: gi|380857379|gb|AFE89428.1| (abscisic stress ripening protein [Ziziphus mauritiana]) HSP 1 Score: 75.5 bits (184), Expect = 1.4e-10 Identity = 92/237 (38.82%), Postives = 116/237 (48.95%), Query Frame = 1
BLAST of CmoCh09G011780 vs. NCBI nr
Match: gi|357443641|ref|XP_003592098.1| (ABA/WDS induced protein [Medicago truncatula]) HSP 1 Score: 72.8 bits (177), Expect = 9.3e-10 Identity = 90/244 (36.89%), Postives = 113/244 (46.31%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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