ClCG08G002110 (gene) Watermelon (Charleston Gray)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GTAATCCACCACCCCATATTCCTTTATAAATATTTGGCCATTTCCTTTCCAAAATACCAACGCATCCAATTAACAAAATACAATACAATCTCAACTAGAAAAAAATACCATGTCGGAGGAAAACCGCCACCACGGCCACCACCACGGCCTCTTCCACCGCCACAAGGAGGAGGAAGGAAATCTCCCCTCCGAAACCACCCCATATTCTGAATCTCAATACTCCAAAAACTCCACTTACTCTTCTGACCAATCTGAAAACAAAACCGCCGGTTATGGCGGTGGCTACGGCGACTCAGAAAATAAGTCGGCCGAATACGGCGGTGGCTATGGGGAGTCTCAAAATAAGGTCTCTGAGTACGGTGGTAGGTACGGTGGTTCGGAAGATAAAACTGGTGAATACGGCGGTGGTTATGGTACGTCTGAAAATAAGGTCGCCGCCGAGTACGGTGGTGGGTACAGCGAGTCGGGGAATAAGGGCGGCGAGTACGGTGGTGGGTATGGTGAGTCCGAAGGTAAGGGCGGCGACTATGATGGTGGGTACAATAAGGGTGGATATAAATCCGGCGAGTACGGTGGTGGGTACGGTGGGTCGGAAGATAAAGGCAGCGAGTACGGCGGTGGATACAAGAAAGAATATGAGGAAGAAAAGGAAGAAGAGAATTCAGATTACAAAAAGGAAGAGAAACACCACAAACATCTTGAGCACCTCGGCGAGCTCGGTGCCGCCGCCGCCGGTGCCTTTGCCTTGGTATATCATATTTAATACACATTTTTATACCTCATGCATCAATCTTTTTTATAATTATTTTATTTTTGAAAAAAAAAATCAAAAATCTTTTAAAATCTAATTTTTATTTATTCCAAAAAGTTATCTTTTTAGTTATTTAGTTTGATTTCAATTTAGTTTTTAAATTTCAAATGGTTACAAATTTTGTTTCAATTTAGTATCTTGGTAATTTAAAAATTTATCTTGATTTTTCGCTAAAAAATTACTTTCAATTTTGATGTTAATGTCTATTAATTAATTGAAATTAATTATAAAGTGAGATTTTAAAATTAACTTTAAAAGTGATAAAGAAAATAGTGAAATTTAATTATTTATAATTCTTTTAGATTAATTATTAGACATTAACATTAAAGACTAAAAGTAAATATTTAATGAAAAATTGAGGTTAAAAGTGTAAAATTTCAAAACAAACCAATTTGAAACAAAACTCAAACCTGAATGATATAATTAACTAAAATCGAACTCAAAACATAAAGACTAAAAATATAATATTTTAAAACCTAAATACTAAAGTGAAACTAGAACCAACACTTAAAAAAAAGTAGAAATGCGTTTTTCTTTATTTTCTTTCTTATACATGAAAAAGTTTTGGAATGAAAGTAAAAAATATCAAACATTGTTATTTAAGAAAAAAATGTTTTTTTTTAAGTTCATTTTAAATGGATTTTCAAGTTACTAATACAAGCACAATTCATTTGGGATAGACTTTTTTTTTATTATTATTATTTTTTTTAATATGAAACAATAAGCCATACGTGCATCCTCAATGTATCTATCTTTTTTTAATTAACCTTAACTACACAAATAAAAGATTAAAAAATATTTAGAAAAGAAAGAACAACTTTGCATCAATCCAAGTATTTTTCTAAAACAATTCATATATGTGAAACTACTAATTAACACACACATCATATAGATTTTTAGGACTATAGTTTAAACTAATTTCTATTTTAATTTAGTACTTTTTGTCAAGATTTCGCATTCGAAAAGTGAATAAACTTCAAAATAACATTTATAGGATGTACGATTTACTCTTCTCAATGTGAAATATTGATTTTGAGATGAAACTTCATGCATGTTAATTTATTTAATATTTTTTAATTATAAATTTAATTTTAAATTTTGATGTTTATGTTTATGTTTATTAGGTTATTTATAGTGATTCAAATTATACACGTGAAATTTGTCATGAGATGACACAAAGAAATATGGTTAGATGGATACGATAAAAAAGTAAGCCTAAAAGTGAACCTATACTTTGTTGTATTACAATTAGCCAATTTATCAATAATTAGTCTAACTCAAAATGTCTAATGCTTATCTACATTTAAATAATGACATACTGAAAATAAAAAGATTAGAAACATTTTTAATAGTTAGATGCAGAAAATAGACATATAATCATTGAAATTTAGTGATAAAAATTTTTAATTTGAATTTTTATATGGAAAATTATCTTAAATGACAAAACTGCTTAAAATAATTACAACTAATAGCAAAATACATAGTTTATCTATGATAGACTGCAATAGATCGTGATAGACTACTATTTGTGTCTATTGCGATCTATCGTGGTCTATTATAGATAGATAGTGAAATTTTGATTTGTAAATATTTTGGTTCCTTTTGCTATATTTGAAAAGAACATTTTTTATTATTCATATATTTTTTGAACCTTAGACCTTTTAATTGATTTATCTTTTGCTAATAAATTGTCCTATAATATTTAATTAATTATTTTCTTGACATCATATAAACTTTGAATTTTATGCTTTGTAGATTCTAGTTGTGTCCTATTCAACTAAAGTGACTTAAGTACCACATGTTTGAGAATAGTTTTAAAATTGTTAAAGTTAGGGGAGTTCAAAGAACTCAATAACGTTAACGAAATTCATTCCATTCGGTTTGAATTGGGTTGGGTTTAAATAGATGAAAATGTTATTGGTTGGTTGGTTTATAGGTTCTCTTAAATAACCCAAACTAACTTAAACCAACCCGAACTTATAATAATTAATTTTAAAATGTATATTTCTTTTTACTTATGATAAAATAATAGATACATATATTTCTTTTTGTTTTATTTAATATCGTATTTTTTGGATAATTTTTTCTCTAACGACTCCTAAGAGCAATTTTTTAGTACTTTGGAAAAAAAAAAACTTTTCATAATATAAATTGAGATTGAGTTGTTAATTCTGATTCAATATATAAAAATAACTAAATAAATTTTTTACTTATTATCATTTTACTAATTTAAATAAATGATCCAATTAACCCGAACCATCCAAACTCAAGTGTTTCATGGTTGGATTGGGTTGGGTTGGGTTGGGTTGAGTTCATTTTTTAAATGAGTTATTTGAGTTGAAGAAATTTACAACATGAACAATTGGATCAGGTCTAAAAAGTTCTTAACCCAACCTACGAGCACCCTTAATTAAAATCAATTAGTTCATAAAATCACACAAAGCATGTTTTTTTGACCATTTAAAATTATTTTTAGTGGTACAAAAATCACATTTAAAAGCTTTAAATTTGATTGATTAAAAATATATGTATACAATTATTTTAACCGTTTCAAAATCAGTTCCAAATATGTACTAAAAAAAAATTTCTTTATATCAAGGTTACAATTTAGATATGACAACATACCAAAACAAGGATATTTTTACTCTTTTGATGAGTAAAACAAAAATATTTTTTAAAGTATAAAAGTATAATTAGAACAATAAAAGAAAAATTTGACCTTTGACCAATTATGTAATTGAACTGTTAATTTATAATATAATTTATTTAATGTCAATTTGTCTCAAGTGGATGATTCCATCACTCACCTTGTAATTATTGAAGTAAAAGCTAATTAAGTTTGAAATCATCTAAATTTTCATACTCGTTAAGAGGAAGAAACTAAAGTTTTCCATTGGCTCCGAATGTGTAATCTCAGCACGAGAAGCATGAGGCAAAGGAGGACACAGAGCATGGGCATAGGCACAAGTTAGAGGAGGAGATAGCGGCGGTAGCTGCCGTCGGAGCTGGTGGCTTTGCATTTCACGAGCACCATGAGAAGGAAGAGGCAAAAGAGCGAGATGAAGAGGCTCATGGAAAGAAGCATCACCATATATTCTAAATTAAACTTCCTATTTTTCCACAATAATATTGTCCATTTTAAAAAGTTAATTACTATCAAATACATGTGTTTTAAAACTTTTTAAAAAATAAATAATAAAAACGGTGTGTTTTGTAAAAGTTTGGTTTCAAAAGAAGTGTTTGGTCAAAGTCAATGTGCCATGTTCTATGATTTTGTCAAACATTTTTTTGGTAAGTTTTTAAAATTACATTTTTTTTTTTTTTTTTTAAACTAAGTTTTAAAACCTGTTGTTTTATATGTATATTGTGTAATGTGTGGTCTTGTGAGTGCTTTCTCTCTGGGTTTGTTTTGTACTTCATTTTGGATTATGTTTCCTTTTTCTTGTTTAAAGAATTTAGAAATGGGTGTGGGAGGGGGTTGGAGATGTAATGTGTTTAGCTGTGCAATAATATTTAACTCTTGTCTTTTTTAA GTAATCCACCACCCCATATTCCTTTATAAATATTTGGCCATTTCCTTTCCAAAATACCAACGCATCCAATTAACAAAATACAATACAATCTCAACTAGAAAAAAATACCATGTCGGAGGAAAACCGCCACCACGGCCACCACCACGGCCTCTTCCACCGCCACAAGGAGGAGGAAGGAAATCTCCCCTCCGAAACCACCCCATATTCTGAATCTCAATACTCCAAAAACTCCACTTACTCTTCTGACCAATCTGAAAACAAAACCGCCGGTTATGGCGGTGGCTACGGCGACTCAGAAAATAAGTCGGCCGAATACGGCGGTGGCTATGGGGAGTCTCAAAATAAGGTCTCTGAGTACGGTGGTAGGTACGGTGGTTCGGAAGATAAAACTGGTGAATACGGCGGTGGTTATGGTACGTCTGAAAATAAGGTCGCCGCCGAGTACGGTGGTGGGTACAGCGAGTCGGGGAATAAGGGCGGCGAGTACGGTGGTGGGTATGGTGAGTCCGAAGGTAAGGGCGGCGACTATGATGGTGGGTACAATAAGGGTGGATATAAATCCGGCGAGTACGGTGGTGGGTACGGTGGGTCGGAAGATAAAGGCAGCGAGTACGGCGGTGGATACAAGAAAGAATATGAGGAAGAAAAGGAAGAAGAGAATTCAGATTACAAAAAGGAAGAGAAACACCACAAACATCTTGAGCACCTCGGCGAGCTCGGTGCCGCCGCCGCCGGTGCCTTTGCCTTGCACGAGAAGCATGAGGCAAAGGAGGACACAGAGCATGGGCATAGGCACAAGTTAGAGGAGGAGATAGCGGCGGTAGCTGCCGTCGGAGCTGGTGGCTTTGCATTTCACGAGCACCATGAGAAGGAAGAGGCAAAAGAGCGAGATGAAGAGGCTCATGGAAAGAAGCATCACCATATATTCTAAATTAAACTTCCTATTTTTCCACAATAATATTGTCCATTTTAAAAAGTTAATTACTATCAAATACATGTGTTTTAAAACTTTTTAAAAAATAAATAATAAAAACGGTGTGTTTTGTAAAAGTTTGGTTTCAAAAGAAGTGTTTGGTCAAAGTCAATGTGCCATGTTCTATGATTTTGTCAAACATTTTTTTGGTAAGTTTTTAAAATTACATTTTTTTTTTTTTTTTTTAAACTAAGTTTTAAAACCTGTTGTTTTATATGTATATTGTGTAATGTGTGGTCTTGTGAGTGCTTTCTCTCTGGGTTTGTTTTGTACTTCATTTTGGATTATGTTTCCTTTTTCTTGTTTAAAGAATTTAGAAATGGGTGTGGGAGGGGGTTGGAGATGTAATGTGTTTAGCTGTGCAATAATATTTAACTCTTGTCTTTTTTAA ATGTCGGAGGAAAACCGCCACCACGGCCACCACCACGGCCTCTTCCACCGCCACAAGGAGGAGGAAGGAAATCTCCCCTCCGAAACCACCCCATATTCTGAATCTCAATACTCCAAAAACTCCACTTACTCTTCTGACCAATCTGAAAACAAAACCGCCGGTTATGGCGGTGGCTACGGCGACTCAGAAAATAAGTCGGCCGAATACGGCGGTGGCTATGGGGAGTCTCAAAATAAGGTCTCTGAGTACGGTGGTAGGTACGGTGGTTCGGAAGATAAAACTGGTGAATACGGCGGTGGTTATGGTACGTCTGAAAATAAGGTCGCCGCCGAGTACGGTGGTGGGTACAGCGAGTCGGGGAATAAGGGCGGCGAGTACGGTGGTGGGTATGGTGAGTCCGAAGGTAAGGGCGGCGACTATGATGGTGGGTACAATAAGGGTGGATATAAATCCGGCGAGTACGGTGGTGGGTACGGTGGGTCGGAAGATAAAGGCAGCGAGTACGGCGGTGGATACAAGAAAGAATATGAGGAAGAAAAGGAAGAAGAGAATTCAGATTACAAAAAGGAAGAGAAACACCACAAACATCTTGAGCACCTCGGCGAGCTCGGTGCCGCCGCCGCCGGTGCCTTTGCCTTGCACGAGAAGCATGAGGCAAAGGAGGACACAGAGCATGGGCATAGGCACAAGTTAGAGGAGGAGATAGCGGCGGTAGCTGCCGTCGGAGCTGGTGGCTTTGCATTTCACGAGCACCATGAGAAGGAAGAGGCAAAAGAGCGAGATGAAGAGGCTCATGGAAAGAAGCATCACCATATATTCTAA MSEENRHHGHHHGLFHRHKEEEGNLPSETTPYSESQYSKNSTYSSDQSENKTAGYGGGYGDSENKSAEYGGGYGESQNKVSEYGGRYGGSEDKTGEYGGGYGTSENKVAAEYGGGYSESGNKGGEYGGGYGESEGKGGDYDGGYNKGGYKSGEYGGGYGGSEDKGSEYGGGYKKEYEEEKEEENSDYKKEEKHHKHLEHLGELGAAAAGAFALHEKHEAKEDTEHGHRHKLEEEIAAVAAVGAGGFAFHEHHEKEEAKERDEEAHGKKHHHIF
BLAST of ClCG08G002110 vs. Swiss-Prot
Match: ASR2_SOLLC (Abscisic stress-ripening protein 2 OS=Solanum lycopersicum GN=ASR2 PE=4 SV=1) HSP 1 Score: 141.7 bits (356), Expect = 1.2e-32 Identity = 64/98 (65.31%), Postives = 76/98 (77.55%), Query Frame = 1
BLAST of ClCG08G002110 vs. Swiss-Prot
Match: ASR1_SOLLC (Abscisic stress-ripening protein 1 OS=Solanum lycopersicum GN=ASR1 PE=2 SV=1) HSP 1 Score: 134.8 bits (338), Expect = 1.4e-30 Identity = 59/88 (67.05%), Postives = 74/88 (84.09%), Query Frame = 1
HSP 2 Score: 40.4 bits (93), Expect = 3.6e-02 Identity = 32/85 (37.65%), Postives = 38/85 (44.71%), Query Frame = 1
BLAST of ClCG08G002110 vs. Swiss-Prot
Match: ASR3_SOLLC (Abscisic stress-ripening protein 3 OS=Solanum lycopersicum GN=ASR3 PE=4 SV=2) HSP 1 Score: 131.7 bits (330), Expect = 1.2e-29 Identity = 59/97 (60.82%), Postives = 77/97 (79.38%), Query Frame = 1
BLAST of ClCG08G002110 vs. Swiss-Prot
Match: K1C9_HUMAN (Keratin, type I cytoskeletal 9 OS=Homo sapiens GN=KRT9 PE=1 SV=3) HSP 1 Score: 91.7 bits (226), Expect = 1.4e-17 Identity = 51/121 (42.15%), Postives = 51/121 (42.15%), Query Frame = 1
HSP 2 Score: 80.9 bits (198), Expect = 2.4e-14 Identity = 55/139 (39.57%), Postives = 59/139 (42.45%), Query Frame = 1
HSP 3 Score: 69.7 bits (169), Expect = 5.6e-11 Identity = 46/130 (35.38%), Postives = 54/130 (41.54%), Query Frame = 1
BLAST of ClCG08G002110 vs. Swiss-Prot
Match: GRP2_PHAVU (Glycine-rich cell wall structural protein 1.8 OS=Phaseolus vulgaris PE=2 SV=1) HSP 1 Score: 90.1 bits (222), Expect = 4.0e-17 Identity = 54/119 (45.38%), Postives = 60/119 (50.42%), Query Frame = 1
HSP 2 Score: 88.6 bits (218), Expect = 1.2e-16 Identity = 52/118 (44.07%), Postives = 57/118 (48.31%), Query Frame = 1
HSP 3 Score: 87.8 bits (216), Expect = 2.0e-16 Identity = 55/127 (43.31%), Postives = 61/127 (48.03%), Query Frame = 1
HSP 4 Score: 81.6 bits (200), Expect = 1.4e-14 Identity = 53/123 (43.09%), Postives = 58/123 (47.15%), Query Frame = 1
HSP 5 Score: 80.9 bits (198), Expect = 2.4e-14 Identity = 53/135 (39.26%), Postives = 58/135 (42.96%), Query Frame = 1
BLAST of ClCG08G002110 vs. TrEMBL
Match: A0A0A0K8U6_CUCSA (Abscisic stress ripening-like protein OS=Cucumis sativus GN=Csa_6G014830 PE=4 SV=1) HSP 1 Score: 415.6 bits (1067), Expect = 4.6e-113 Identity = 211/303 (69.64%), Postives = 227/303 (74.92%), Query Frame = 1
BLAST of ClCG08G002110 vs. TrEMBL
Match: K4FAV1_9ROSA (Abscisic stress ripening protein OS=Ziziphus mauritiana GN=Asr PE=2 SV=1) HSP 1 Score: 241.1 bits (614), Expect = 1.6e-60 Identity = 148/299 (49.50%), Postives = 174/299 (58.19%), Query Frame = 1
BLAST of ClCG08G002110 vs. TrEMBL
Match: G7IBZ5_MEDTR (ABA/WDS induced protein OS=Medicago truncatula GN=MTR_1g098680 PE=4 SV=1) HSP 1 Score: 239.2 bits (609), Expect = 5.9e-60 Identity = 137/283 (48.41%), Postives = 172/283 (60.78%), Query Frame = 1
BLAST of ClCG08G002110 vs. TrEMBL
Match: Q2TUW1_SOYBN (Abscisic stress ripening-like protein OS=Glycine max GN=GLYMA_20G167500 PE=2 SV=1) HSP 1 Score: 231.9 bits (590), Expect = 9.5e-58 Identity = 136/279 (48.75%), Postives = 165/279 (59.14%), Query Frame = 1
BLAST of ClCG08G002110 vs. TrEMBL
Match: C6T3F7_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1) HSP 1 Score: 229.2 bits (583), Expect = 6.1e-57 Identity = 137/274 (50.00%), Postives = 162/274 (59.12%), Query Frame = 1
BLAST of ClCG08G002110 vs. TAIR10
Match: AT5G46730.1 (AT5G46730.1 glycine-rich protein) HSP 1 Score: 80.9 bits (198), Expect = 1.4e-15 Identity = 50/126 (39.68%), Postives = 55/126 (43.65%), Query Frame = 1
BLAST of ClCG08G002110 vs. TAIR10
Match: AT2G05580.1 (AT2G05580.1 Glycine-rich protein family) HSP 1 Score: 71.6 bits (174), Expect = 8.3e-13 Identity = 49/143 (34.27%), Postives = 61/143 (42.66%), Query Frame = 1
HSP 2 Score: 65.5 bits (158), Expect = 5.9e-11 Identity = 46/132 (34.85%), Postives = 58/132 (43.94%), Query Frame = 1
HSP 3 Score: 53.9 bits (128), Expect = 1.8e-07 Identity = 38/124 (30.65%), Postives = 52/124 (41.94%), Query Frame = 1
BLAST of ClCG08G002110 vs. TAIR10
Match: AT5G35660.1 (AT5G35660.1 Glycine-rich protein family) HSP 1 Score: 68.6 bits (166), Expect = 7.0e-12 Identity = 49/135 (36.30%), Postives = 60/135 (44.44%), Query Frame = 1
BLAST of ClCG08G002110 vs. TAIR10
Match: AT4G30460.1 (AT4G30460.1 glycine-rich protein) HSP 1 Score: 64.7 bits (156), Expect = 1.0e-10 Identity = 42/117 (35.90%), Postives = 48/117 (41.03%), Query Frame = 1
BLAST of ClCG08G002110 vs. TAIR10
Match: AT2G21660.1 (AT2G21660.1 cold, circadian rhythm, and rna binding 2) HSP 1 Score: 63.5 bits (153), Expect = 2.3e-10 Identity = 47/120 (39.17%), Postives = 54/120 (45.00%), Query Frame = 1
BLAST of ClCG08G002110 vs. NCBI nr
Match: gi|449441220|ref|XP_004138380.1| (PREDICTED: glycine-rich cell wall structural protein 1.8-like [Cucumis sativus]) HSP 1 Score: 415.6 bits (1067), Expect = 6.6e-113 Identity = 211/303 (69.64%), Postives = 227/303 (74.92%), Query Frame = 1
BLAST of ClCG08G002110 vs. NCBI nr
Match: gi|659126238|ref|XP_008463082.1| (PREDICTED: keratin, type I cytoskeletal 9-like [Cucumis melo]) HSP 1 Score: 384.8 bits (987), Expect = 1.3e-103 Identity = 203/289 (70.24%), Postives = 217/289 (75.09%), Query Frame = 1
BLAST of ClCG08G002110 vs. NCBI nr
Match: gi|502118982|ref|XP_004496466.1| (PREDICTED: keratin, type I cytoskeletal 10-like [Cicer arietinum]) HSP 1 Score: 250.8 bits (639), Expect = 2.8e-63 Identity = 137/277 (49.46%), Postives = 169/277 (61.01%), Query Frame = 1
BLAST of ClCG08G002110 vs. NCBI nr
Match: gi|380857379|gb|AFE89428.1| (abscisic stress ripening protein [Ziziphus mauritiana]) HSP 1 Score: 241.1 bits (614), Expect = 2.2e-60 Identity = 148/299 (49.50%), Postives = 174/299 (58.19%), Query Frame = 1
BLAST of ClCG08G002110 vs. NCBI nr
Match: gi|357443641|ref|XP_003592098.1| (ABA/WDS induced protein [Medicago truncatula]) HSP 1 Score: 239.2 bits (609), Expect = 8.5e-60 Identity = 137/283 (48.41%), Postives = 172/283 (60.78%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
|