CmoCh09G001910 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CCCATCGCCGGATCGCGCTAAACTTCGAGAGCAAAGCAACTGCGGAAGAGAGTGACGATGACGGTGTTTCATTTCTTCAACTGTGCGATTCTCACTTTCGGTCCTCATGCAGTCTACTACTCTGCCACGCCATTGTAAGGATCTCCGTCTTCTCCTCTTCTATCGTTTAATTTTTCTCCTATCTTCCTCTACTTTTTAGATCTCCTCTTCCGATTACTGCCTCTTTAGGTTCACACTGATTCCTTCTCTTTATATTCTGCTCTATTTTCTTTGTTTGAATCGGAATTCGCATGGAACTATATATCAGAGTCTCCTCTTTGCCGCAGTGATTCCTTCTGTTGAAATTCCGTTCTGTTTGCTTTGTTTTAAATGATTTTTTGACATTTTGTTTGAGCTGTTCAAATTTTTATTTCTTATTCGTATGGAATTGGATATTAGAATCAGATTGGAGAAACAGTTTAAAAAGCAGTCTGTTAACTACCGAAATGCTTCGAGATTTGATCCAGACGGCCAAATCTCTTATTTTGATTAGGTAACCTTGAAATTGCTAGAGATTTTTTGACGAATTAGGAGGTTAGTGGATGCTGTTACTTGGAATATCATGATCTCAGCAGTCAGCATATACAAGGGTAGGAAAGTTGTCATTAGCTCGAGAGTTGTTTGATTATATGCCACAAAGAGATGTTGTTTCGTGGAATTCAATGATAGCTCTTAGGATATGCACACAATTCAATGCAAATTGCTGGAAGGCCAGCCAGTTTTATATTTTTATTTTTACTTTTGTATTAGTTTGTACTAATTCATTCAGAATTCAATAGAGCCGATCATTTTTGTCCCTCAAAAATAATAATATAGTAATAATGGTAATGATAATACTAACAATAAAGATATTGGCCAGTTGGATTCTTTAAAGACTTTTAGATGAAGTAAATCTGAGATACAATTGCATATTATCTTGCTCATGGAATCGACGATACTTATGCAAGTATCTGATTCTGTCATAATTTTATCTTTTATATTTACCTAAAAGTCACAATTTCATTTTCACTAAGAACTCAAGCTTTGCAGGTCTGAGTATGATACGCTCGGAACATCAGTTAAAGCGGCATTTGTTTATCTCGGAACTGCCTTAGTAAAGGTTGATGATTTCCGAACATGCCAAACTCCAAAATGGATTGAGACCTTGAATTTCTTTACTTATATTTTTGGTATATTGTTATTATTAAAGACACTTCTTCAGGAATCTAACTGATTTCTTTTTCTGCATTCTCATCAGCTTGTATGCCTTGCAACCTTTCTGAACGTGTCAGAGAATGATTCCTTTGACCTATATCAGGTATTCACAATCTTTTCATCTATACTTGGTGAAGATATCAGTAATATATTGTTGTTACATTTTGATTCCATCATTTGTAATGCCTATTCCTATCATTGCAATTATGCTCTTCAACTATGTACCTTCATTCCTATAAAAATAACTATGAATGATCATAAAATTATTAGAAGCTTTCATCTTTGTTTTTATTTCTTTTTCAGCGTATTTTGGTAATGGCTACTACCACATCACTAGGCATAAATGATTTAAATTTTCATATCTCGAAGATATGCATTTTGTCCCTTTTAGTTCGTTCAAATCTTCGACTTGGAAGGTTAAATGCATTAATTTACCTTGGAATTAGGGGGAAAAAATTTGGTTGCTTGAGTATATTCCTCAACTGGGAAACCTAACTTCCATTATGTAATACTGGCCCTCCTTTTTTTGAATTTACTTGAATTGTCATGCTCCACATTGCACTCCGCTTTATTGGTTGGTGTTGATTTAGTCGACTGTTGGAAATTGTTATTTACTATCACGATTATGGAAATCCTGTTTGTATAGAACACGAGGAGTCAATGCTATGCCATTAAATGGTTTGCAACGAAAAGATTAATGCATCCCTTGGATTCAGAATTTTACAACTTGAATCAGAATAGTATTACAGAACTGTTCTTAGTGTTGAATTGAAAAGGGATTACTTGTGATGTAGTTGCAAGGCACTATTTGGTGAACTAGCCTTGTTTGCTTCCTCTTTTCCTCTTTCTTCTATCAAATGGTCATATAGCAGAGCTAAATGTTATGGTTCTTTTATTAGATTCTCTTATCAAATGTACTAATACTTTCAGCTGAAACCTTCCTATTTGTAGGAAATTTCATTAGAAAGTCTTTACACGTGCCTGTAGCTTAGCAGTTGTTAACAAGGTAGAATTCTTTTACTTCAGGAACTGTTGAAAGCGCTTATTGGTTTTATTGATGTCGCCGGACTTTACTTTGCTTTGACCCAGTTGACATATCGGAACATATCTCAGAACCATAAATTTCAGGCAGTTGGACTGGGTGAGTTTATATAGAGTTAATTAATTAAGGTTCTTTTAGTTTGAATGTAAATGCAGGCTGCAGATCGGTTTCTGCTTGTTTATTTCCATCTTTTAATATCTCCCCTAACATTTAATCATCGAATGGTCTTGTTACTCTATTCTTTTTGTCTGCAGGTTGGGCATTTGCTGATTCTGTTTTACACAGATTGGCACCACTTTGGGTCGGCGCCAGAGGACTGGAGTTTACTTGGGATTACATTTTGCAGGGCCTTGAATCTAATGCAAATCTGGTTTCGATCTTTCTTCTTCTTTACTTTTAAATATTCTTTATTTGGTTACTTTAAGGAGGCATTCAACCGTCGATATGATCCTATTTTATTTACAAGAAATTCTTGGGTTCTTTATCTTGCAATGTGAGTGAAGAATTCCTCAACTGGACTGTTGCTTCTCTAATTTCTGTCCCCCACTTCAATTCAGGTGTTGAGTATATCTCTTGCCGCATTGGGGTCTTTGATGTGGCTTCGGAAAAACAAGCCCAAGACTTTAATTCCCATAATTTATATCTGTGCACTGATCGTGGCTACCATGCCATCCATCACAAGGTATGCACATCAAAATTAAATGATTTTCCATTTCATTTTATTTACCTGCTTTTTAACTATCCGAGCATCAATAGGCAAGTAAAATAATACTGTTGTTCTAGATTCAAAACTTATGACAAGCTTACCTATTTAGAGATTTGCCTTTTGCTTGCGCAATCTGTTATGCTAATTTTCAAAATTGATGTTGAATCTTTCCCCTTGCAAATTGGCTGGCTTTCAGCAATTTGCAGGGTTTCAAGCTCCTAAGTTCAATTCACAATTCAGATATGGAGAGTGCTTAATTTTAATAATACTCTTGCAAATTGTTTCTTCCAGCTACTTAAGGCGAGACATGGATTGGCACTTCCCAAAGGTGGTGGGATTTGAACTCTTCACCTCCATGGTTATGGCTTTTACTAGTTGGCAGCTTTTTTCTGCTTGTCAGAGACCCTCTGCTTAAGGGTACGGCACATTGGGTTGACTGGGGGGCAATTTATCGAGGGTGGACGTGGATTTTGGAGGTGTGGACCCGTCTACCTAAGCTTGCTGTTGTGCGCAGTTTTCCGCCTAATTTTATTGCCATTGCAAAATCATAATGTGTCGTTTAGTTTCAGATTTAGAGATTGTCAGCTTTGTAGTGTTTAATCTCAGGTAAAAAGGAGAGTTGATTTTGAATGGAAGTAAAAGGTTAGCTTGTGGAGACTACGTAATCCTTACTCTTTTTCCCCTCCAGATTTGGAACGAAAGTAGAAAATAATGTTTGGTTAGTCTTTCCTTTTTCAATTCTTCTACTGAAGGCAATGGTTGCCTCACATCTAGTCTCGCTTAGTTCTTCAGATTTTACGTCCAGATATCAATTTAAGTTATTTTTTTTTCATTTAA CCCATCGCCGGATCGCGCTAAACTTCGAGAGCAAAGCAACTGCGGAAGAGAGTGACGATGACGGTGTTTCATTTCTTCAACTGTGCGATTCTCACTTTCGGTCCTCATGCAGTCTACTACTCTGCCACGCCATTGTCTGAGTATGATACGCTCGGAACATCAGTTAAAGCGGCATTTGTTTATCTCGGAACTGCCTTAGTAAAGCTTGTATGCCTTGCAACCTTTCTGAACGTGTCAGAGAATGATTCCTTTGACCTATATCAGGAACTGTTGAAAGCGCTTATTGGTTTTATTGATGTCGCCGGACTTTACTTTGCTTTGACCCAGTTGACATATCGGAACATATCTCAGAACCATAAATTTCAGGCAGTTGGACTGGGTTGGGCATTTGCTGATTCTGTTTTACACAGATTGGCACCACTTTGGGTCGGCGCCAGAGGACTGGAGTTTACTTGGGATTACATTTTGCAGGGCCTTGAATCTAATGCAAATCTGGTGTTGAGTATATCTCTTGCCGCATTGGGGTCTTTGATGTGGCTTCGGAAAAACAAGCCCAAGACTTTAATTCCCATAATTTATATCTGTGCACTGATCGTGGCTACCATGCCATCCATCACAAGCTACTTAAGGCGAGACATGGATTGGCACTTCCCAAAGGTGGTGGGATTTGAACTCTTCACCTCCATGGTTATGGCTTTTACTAGTTGGCAGCTTTTTTCTGCTTGTCAGAGACCCTCTGCTTAAGGGTACGGCACATTGGGTTGACTGGGGGGCAATTTATCGAGGGTGGACGTGGATTTTGGAGGTGTGGACCCGTCTACCTAAGCTTGCTGTTGTGCGCAGTTTTCCGCCTAATTTTATTGCCATTGCAAAATCATAATGTGTCGTTTAGTTTCAGATTTAGAGATTGTCAGCTTTGTAGTGTTTAATCTCAGGTAAAAAGGAGAGTTGATTTTGAATGGAAGTAAAAGGTTAGCTTGTGGAGACTACGTAATCCTTACTCTTTTTCCCCTCCAGATTTGGAACGAAAGTAGAAAATAATGTTTGGTTAGTCTTTCCTTTTTCAATTCTTCTACTGAAGGCAATGGTTGCCTCACATCTAGTCTCGCTTAGTTCTTCAGATTTTACGTCCAGATATCAATTTAAGTTATTTTTTTTTCATTTAA ATGACGGTGTTTCATTTCTTCAACTGTGCGATTCTCACTTTCGGTCCTCATGCAGTCTACTACTCTGCCACGCCATTGTCTGAGTATGATACGCTCGGAACATCAGTTAAAGCGGCATTTGTTTATCTCGGAACTGCCTTAGTAAAGCTTGTATGCCTTGCAACCTTTCTGAACGTGTCAGAGAATGATTCCTTTGACCTATATCAGGAACTGTTGAAAGCGCTTATTGGTTTTATTGATGTCGCCGGACTTTACTTTGCTTTGACCCAGTTGACATATCGGAACATATCTCAGAACCATAAATTTCAGGCAGTTGGACTGGGTTGGGCATTTGCTGATTCTGTTTTACACAGATTGGCACCACTTTGGGTCGGCGCCAGAGGACTGGAGTTTACTTGGGATTACATTTTGCAGGGCCTTGAATCTAATGCAAATCTGGTGTTGAGTATATCTCTTGCCGCATTGGGGTCTTTGATGTGGCTTCGGAAAAACAAGCCCAAGACTTTAATTCCCATAATTTATATCTGTGCACTGATCGTGGCTACCATGCCATCCATCACAAGCTACTTAAGGCGAGACATGGATTGGCACTTCCCAAAGGTGGTGGGATTTGAACTCTTCACCTCCATGGTTATGGCTTTTACTAGTTGGCAGCTTTTTTCTGCTTGTCAGAGACCCTCTGCTTAA
BLAST of CmoCh09G001910 vs. Swiss-Prot
Match: TM147_XENLA (Transmembrane protein 147 OS=Xenopus laevis GN=tmem147 PE=2 SV=1) HSP 1 Score: 115.5 bits (288), Expect = 7.4e-25 Identity = 65/169 (38.46%), Postives = 95/169 (56.21%), Query Frame = 1
BLAST of CmoCh09G001910 vs. Swiss-Prot
Match: TM147_XENTR (Transmembrane protein 147 OS=Xenopus tropicalis GN=tmem147 PE=2 SV=1) HSP 1 Score: 115.5 bits (288), Expect = 7.4e-25 Identity = 65/169 (38.46%), Postives = 95/169 (56.21%), Query Frame = 1
BLAST of CmoCh09G001910 vs. Swiss-Prot
Match: TM147_DANRE (Transmembrane protein 147 OS=Danio rerio GN=tmem147 PE=2 SV=1) HSP 1 Score: 113.2 bits (282), Expect = 3.7e-24 Identity = 67/184 (36.41%), Postives = 102/184 (55.43%), Query Frame = 1
BLAST of CmoCh09G001910 vs. Swiss-Prot
Match: TM147_BOVIN (Transmembrane protein 147 OS=Bos taurus GN=TMEM147 PE=2 SV=1) HSP 1 Score: 111.3 bits (277), Expect = 1.4e-23 Identity = 60/155 (38.71%), Postives = 85/155 (54.84%), Query Frame = 1
BLAST of CmoCh09G001910 vs. Swiss-Prot
Match: TM147_HUMAN (Transmembrane protein 147 OS=Homo sapiens GN=TMEM147 PE=1 SV=1) HSP 1 Score: 111.3 bits (277), Expect = 1.4e-23 Identity = 60/155 (38.71%), Postives = 85/155 (54.84%), Query Frame = 1
BLAST of CmoCh09G001910 vs. TrEMBL
Match: A0A0A0LDP2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G852520 PE=4 SV=1) HSP 1 Score: 443.4 bits (1139), Expect = 1.7e-121 Identity = 218/227 (96.04%), Postives = 222/227 (97.80%), Query Frame = 1
BLAST of CmoCh09G001910 vs. TrEMBL
Match: E0CPD6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0001g11380 PE=4 SV=1) HSP 1 Score: 431.8 bits (1109), Expect = 5.2e-118 Identity = 212/227 (93.39%), Postives = 219/227 (96.48%), Query Frame = 1
BLAST of CmoCh09G001910 vs. TrEMBL
Match: A0A061FBA2_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_033938 PE=4 SV=1) HSP 1 Score: 431.0 bits (1107), Expect = 8.9e-118 Identity = 214/228 (93.86%), Postives = 218/228 (95.61%), Query Frame = 1
BLAST of CmoCh09G001910 vs. TrEMBL
Match: A9P9X3_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0002s13160g PE=2 SV=1) HSP 1 Score: 430.6 bits (1106), Expect = 1.2e-117 Identity = 212/228 (92.98%), Postives = 220/228 (96.49%), Query Frame = 1
BLAST of CmoCh09G001910 vs. TrEMBL
Match: V4SK86_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10002374mg PE=4 SV=1) HSP 1 Score: 430.3 bits (1105), Expect = 1.5e-117 Identity = 213/228 (93.42%), Postives = 219/228 (96.05%), Query Frame = 1
BLAST of CmoCh09G001910 vs. TAIR10
Match: AT1G47640.1 (AT1G47640.1 unknown protein) HSP 1 Score: 399.1 bits (1024), Expect = 1.9e-111 Identity = 195/227 (85.90%), Postives = 209/227 (92.07%), Query Frame = 1
BLAST of CmoCh09G001910 vs. NCBI nr
Match: gi|659109352|ref|XP_008454671.1| (PREDICTED: transmembrane protein 147 [Cucumis melo]) HSP 1 Score: 444.1 bits (1141), Expect = 1.5e-121 Identity = 219/227 (96.48%), Postives = 222/227 (97.80%), Query Frame = 1
BLAST of CmoCh09G001910 vs. NCBI nr
Match: gi|778686441|ref|XP_011652393.1| (PREDICTED: transmembrane protein 147 [Cucumis sativus]) HSP 1 Score: 443.4 bits (1139), Expect = 2.5e-121 Identity = 218/227 (96.04%), Postives = 222/227 (97.80%), Query Frame = 1
BLAST of CmoCh09G001910 vs. NCBI nr
Match: gi|225458469|ref|XP_002284036.1| (PREDICTED: transmembrane protein 147 [Vitis vinifera]) HSP 1 Score: 431.8 bits (1109), Expect = 7.5e-118 Identity = 212/227 (93.39%), Postives = 219/227 (96.48%), Query Frame = 1
BLAST of CmoCh09G001910 vs. NCBI nr
Match: gi|590592865|ref|XP_007017400.1| (Uncharacterized protein TCM_033938 [Theobroma cacao]) HSP 1 Score: 431.0 bits (1107), Expect = 1.3e-117 Identity = 214/228 (93.86%), Postives = 218/228 (95.61%), Query Frame = 1
BLAST of CmoCh09G001910 vs. NCBI nr
Match: gi|224067292|ref|XP_002302451.1| (hypothetical protein POPTR_0002s13160g [Populus trichocarpa]) HSP 1 Score: 430.6 bits (1106), Expect = 1.7e-117 Identity = 212/228 (92.98%), Postives = 220/228 (96.49%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |