Carg10573 (gene) Silver-seed gourd

Overview
NameCarg10573
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionPentatricopeptide repeat-containing protein
LocationCucurbita_argyrosperma_scaffold_031 : 34027 .. 39874 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATATATATAAAATACAATTTTGTGGCGAGGGGTTGGGACCGATGAGCGAATAGCAGGGGAAGGCCAACGCCGGATCGCGCTGAAGTTGGAGAGCAAAGCAACTGCGGAAGAGAGCAACGATGACGGTGTTTCATTTCTTCAACTGTGCGATTCTCACTTTCGGTCCTCATGCTGTCTACTACTCTGCAACGCCCTTGTAAGGATCTCGCTTTTTCATCTTCCTTGCATCTCCTTCTACTTCTTTAGATCTCCTGTTCCTCGCACTGTCTCTTCAGACCCACAGTGATTTGTTGTGTTGAAATTCTCCTCACTTTGCTTTGTTTGGAATGATTTCTTGCTGTTTAATCTTGGACTGCTTCAATTTTAGTTCCTCTGCTCGTCCGGAGTGATTCGTTCGGTTGAAATTCCGTTCTCCTTGCTTTGTTTTTATATGATTTATTCATTGTTTGGACTGTTCAAGTTATTAGTTCTGATTTGTATGGAGCTGTGTGTCTGAACTGGATTAGAGAATCAGTTTAGAAGCAGTCTCTATTTTGCAAAGTACCGAAATGCTTAATGACTTGAGTCGGCTGACCAACTTCCTTGTTTTGATGAAATGGAATTGCTGTAGTTTATTAGAGTAGTGGAACGGTTTGTATTCCCAGTGCCACGTTCTGATTTCTACCATGTACGATTTGGTTGCCATAGCTACCAAAATAAGCAATATAAGTCAGTTAAGACAGCTTCATGCGCATCTTGTTCTCAATTCCCTCCAATCTCAGAACTACTGGGTTTCTCTGCTCCTCACTATCTGTACTCGTCTTCACGCTCATCCTTCCTATGCGGCTTCTATTTTTACCTCCTCGCCCTACCCCAATGCTTCTGTTTACAGTTGTATGCTCAAATATTACTCCCGCATGGGTGCCCACGACGAGGTGGTTTCTCTCTTCCGATGCATGCAGTGTCTAGACCTCAGGCCCCATCCCTCTGTTTATATATACTTGATTAAGTTAGCTGGGAAATCTGGCAATTTGTTCCATGCTTCTGTCCTGAAGTTGGGTCATATTGACGACCACTTCATCCGTAATGCTGTATTGGATATGTATGCAAAATATGGACAAGTGGATCTTGCCAGGAAGTTGTTTGAGCAAATGCCTAATAGAACTCTAGCGGACTGGAATTCAATGATTTCTGGCTGTTGGAATTCGGGAAATGAAGCTGATGCAGTCATGCTGTTTAATATGATGCCTGATAGGAATACTATTTCATGGACTGCCATGGTTACTGGGTATGCTAAGAGGAGGGACTTGGAGAGTGCTAGAAGGTATTTTGACGAGATGCCAGAGAAAACTGTAGTCTCGTGGAATGCCATGCTATCAGCTTATGCTCAAAATGAATGTGCAGAAGAGGCTTTGAAATTGTTCCATCGAATGCTGAAAGAGGGAATCACTCCTGATGATACAACATGGGTAGCTGCAATTTCATCGTGCTCTTCCATCGGCAATCCTAACCTTGCTGATTCACTTCTAGCAAAGATTAACCAAAAGCACGTCATTTTGAATAATTATGTCAAAACGGCTTTACTTGACATGCATGCAAAATTTGGTAACCTTGAAATTGCTAGAAGAATTTTTGATGAATTGGGAGGTCAGAGGAATGCTGTTACTTGGAATGTCATGATCTCAGCATATACAAGGGCAGGAAAACTGTCATTAGCTCGGGAGCTGTTTGACAATATGCCAAAAAGAGATGTTGTTTCATGGAATTCAATGATAGCTGGTTATGCACAAAATGGAGAGTCTGCCATGTCAATTCACCTCTTTAGAGAAATGATTGATTGTACGGACATACAACCAGATGAGGTCACCATAGCTAGTGTCTTATCGGCCTGTGGACATATTGGGGCTCTGAAATTTAGTTACTGGGTTCTAAATATCGTTCAAGAGAAGAACATAAAGTTTGGCATTTCAGGATTCAATTCTTTGATATTCATGTACTCTAAATGTGGAAATGTGGTTGATGCCCATAGGATATTCCAAAATATGGGGACGAAAGATGTTGTTACTTTCAATACACTGATTTCAGGATTTGCAGCCAATGGTCATGGGAAGGATGCTATCAAGTTACTGTTAACAATGGAAGAAGAAGGCATTGAACCAGACAATGTCACATATATTGGTGTTTTGACTGCATGTAGTCATGCAGGAATGCTGAAAGAAGGTAAAAACATCTTTAAGTCAATTAAAGCACCTACCGTGGATCACTATGCTTGTATGGTTGATTTATTAGGAAGAGCAGGTGAATTAGATGAAGCCAAAATATTAATTGAATCTATGCCAATGAAACCTCACGCTGGTGTTTATGGCTCTTTGTTAAATGGCAGTCGAATTCACAAGAGAGTTGAGCTGGGAGAACTTGCTGCTAACAAGCTCTTAGAGCTTGAACCTCAAAACCCAGGAAATTATATTTTACTTTCTAATATATATGCCTCTGCTGGAAGATGGGAAGATGTTAGACAGGTTAGAGAGAAGATGAGGAAGGGAGGTGTCAAGAAATCAGTTGGAATGAGTTGGGTGGAATATAAGGGTCAAATACATAATTTCACTGTGGGTGATAGATCGCATGAATGGTCAAAAGATATTTATCGATTATTGGCTGAACTTGAAAGGAAGATGAAGAGGGTTGGCTTTGTAACTGATAAAAGTTGTGCACTGCGAGATGTTGAGGAGGAAGAGAAGGAAGAAATGCTGGGGACTCACAGTGAGAAGTTGGCCATTTGTTTTGCTCTTCTTGTCAGTGAAGTGGGGACACCAATTAGAGTGGTGAAAAATTTGAGAATTTGTATGGATTGTCATACAGCTATTAAGATGATCTCAAAGTTAGAGGAAAGAGAGATTATTGTCCGTGATAATAATAGGTTCCATTGTTTTAGTGAAGGGATATGTTCTTGCCATGATTACTGGTAAATTGGCGAAGAGCAAATTTATGGATAAAATTCATTTGCATAAAGAGAGATTGTAAGCACAACCCGGCCTTCAATAGTGAATCACGTATTTTACCCTACTTGTCTTGTCACCATATTCAGCTTTTAACTGAAGAACACTTAATGATTAGGTCCAAGGATCAATATCAAAGAGCATTGTATCTCTGTGATGTACCTTACAAGAGTTATGCATTAGGAGTTTGATAGTTTTATTTTTCTACCAATTCATTCATAATTCAACAGAGCAAACCATGTTTATCAGGGAAAATAAATTAGGAGAGATTGGCCAGTTGGAATCTTTGAAGTGTTTTTGATGATGTAATCAAGAATTGCATATTTTCTTCCTCACAGAATCGATGAATGCATGGTCTAATATCTGGTTCTGTCATAATTTTACGTTTGTCTATAAGTCACGATTTCATTTCACTGAGAACTCTAGCTATACAGATCTGAGTATGACACACTCGGAACGTCAGTCAAAGCAGCACTGGTTTACCTTGGAACGGCCTTAGTAAAGGTTTGTGATTTCTGAACACTTCAAGGTGGATTGAGACCTTGAATTTCTCTCCATATATTTTTGGTATATTATTGTTTTTTCACTTCTCCATGAATCTAACTGATATTTTTCTATGCATTCTTGTCAGCTTGTCTGCCTTGCAACCTTCCTTAACGTGTCAGAGAATGACTCCTTTGACCTATATCAGGTATTGATGTTCTTTTCATCTGCAATTGGTGGAGACATTTTTTTTATATATTTTAGTGTACATTTTAATTCCATCAGTTGTAATGCCTAGTATCCTTTCTACATTGTAAGTCTCTGACTTGGAAAATTAAAACTTCATTTAACCTTTGGATGTCGGGACAAAATTATTGGTTGCTTGGCTATAACCCTCAACTGGGAAACTTAAATTGTTATACTCTACCCTGCATTCAACCTTTCTGGTTGATTGGATTGGTGTTGGTGGGTGGGAAGGTTTAGTTAGTCTATTGTTAGAACTTGTTTTTTACTATCACATATATATAATTTTTGTTTAATAGAACATAGAGTTAATGTCATACCATTAAATGGTTTGGAACGAAATGAATAATGCAGCCTAGTATCCAGAATTGGACAAACATGAATCAGAATAGCATTACAGAACTGTTTTTAGCGTTAAGGTGAAAAATAGTTTCCAGTCTCTATTTCATGTACTAGCCTTGATTCCATCCTCTTTTTCCCTCTTTATGGGATGTCTTCCTGTTTCATCCAATGAGCAGTGCTAAATGGTATGTTTCTTTTATTAGATCCTCATGTCAAGTGTACTAACTATGCTTTTATTAACAAGGCCTCCATATTTTTAGGAAATTTTGTTCGAGTCGTGCCTGTAACTTGCCTGTAGTTACAGCGAATGTTAACAAGGTATAATTCGTGTACGACAGGAACTGTTGAAAGCGCTTATTGGTTTAATAGATGTTGCCGGACTTTACTTCGCTTTGACCCAGTTGACTTACCGGAACATTTCTCAGAACCATAAATTTCAGGCAGTTGGACTGGGTGAGTTTGTTGAGCAATTAATTGAGGTTTTTTAGTTTGATTGTAAATGATGACTGCATGCACGGTTTATGTTTGTTTATTTCGATCTTTCAATATTTTTCCCCATCTTCTAATCATTGGATGGCCTGGTTACTCTGTTCTTCTTGTCTGCAGGTTGGGCATTCGCTGATTCTGTTTTGCATAGACTTGCACCACTTTGGATTGGTGCCAGAGGACTAGAGTTTACTTGGGATTACATTTTGCAGGGCCTTGAAGCTAATGCAAATCTGGTTTCCATCTCTCTTCTTCTTTATTTTAAGATACTCTTTATTTGGCTATTGTGAGAGATTCAATCATCGATTTGATTTTATTTACTTGATATTTCTTGGGTTCTTGATCTTGCATTCTGGGTGAAGTATTTGTCATGTCAGCCGCGCTGTTGCTTCTCTAATTTCTGCTCCCCACTTCAATTCAGGTGTTGAGCATATCCCTTGCTGCATTGGGATCTTTGATGTGGCTTCGGAAGAACAAACCCAAAGCGCTAATTCCCATAATTTATATCTGTGCACTGATTGTGGCTACTATGCCATCAATCACAAGGTATGTAACATCAATATTAGAAAATTTGCCACTTCGAACTTGATTCACTTTGCCTTCAAACTATCTGTGAACATCAAAAGAAGGTATGCAACATTTATTTGGTTTTTGAAAATTGTGCTTGTTTTCCTAATATTTCTCTACAATGAGTTTCATTATTTTTAAGAAAAAGTTGAAATTCCTAGCCAAACTCTAAAAATAAAACAAGTTTTTCAAAACCCGTTTTAATTTTCAAATTCAAATAAAGATGTACACAATTTTAACACAAGCTGCAAATTTTCTTTCCAGCTACTTAAGGCGGGGAATGGGTTGGCATTTCCCTAAGGTGGTGGGATTTGAACTCTTCACCTCTTTGGCGATGGCTTTTATTAGTTGGCAGCTTTTTTCTGCTTGTCAGAGACCCTCTGTTTAAGGTTATGGCACACGGGTTGACTATATTGAGGCCGGACGTGAATTTTGGAGGTGTGGATTGCAGATCTCCTTTTACTTAACCTTCTCTTTTGCAGTGTTCCGCCTAATTTCGTTATCATTTGCAAAACCAAATTGTGGGGTTAAGTTTCAGATGTTGTAAGGTTGTAAGCTTTGTAATGTATGATGACAGGTAAAAGGGAGTTTCAGATGTTGTAACGTTTAGTTCTTTTTCTTTTGAGATTTTGACTGGAAGTAAAAGGTAGCTTGCCAGGACAATGTTATCTCATTTTCCTTTCCCTACCCTCCCTTCCATTCTTTTACTGAGGAACATGATTACACAGATGGAAGAGGTTACCTCAGATCAA

mRNA sequence

ATATATATAAAATACAATTTTGTGGCGAGGGGTTGGGACCGATGAGCGAATAGCAGGGGAAGGCCAACGCCGGATCGCGCTGAAGTTGGAGAGCAAAGCAACTGCGGAAGAGAGCAACGATGACGGTGTTTCATTTCTTCAACTGTGCGATTCTCACTTTCGGTCCTCATGCTGTCTACTACTCTGCAACGCCCTTAGTAGTGGAACGGTTTGTATTCCCAGTGCCACGTTCTGATTTCTACCATAACTACTGGGTTTCTCTGCTCCTCACTATCTGTACTCGTCTTCACGCTCATCCTTCCTATGCGGCTTCTATTTTTACCTCCTCGCCCTACCCCAATGCTTCTGTTTACAGTTGTATGCTCAAATATTACTCCCGCATGGGTGCCCACGACGAGGTGGTTTCTCTCTTCCGATGCATGCAGTGTCTAGACCTCAGGCCCCATCCCTCTGTTTATATATACTTGATTAAGTTAGCTGGGAAATCTGGCAATTTGTTCCATGCTTCTGTCCTGAAGTTGGGTCATATTGACGACCACTTCATCCGTAATGCTGTATTGGATATGTATGCAAAATATGGACAAGTGGATCTTGCCAGGAAGTTGTTTGAGCAAATGCCTAATAGAACTCTAGCGGACTGGAATTCAATGATTTCTGGCTGTTGGAATTCGGGAAATGAAGCTGATGCAGTCATGCTGTTTAATATGATGCCTGATAGGAATACTATTTCATGGACTGCCATGGTTACTGGGTATGCTAAGAGGAGGGACTTGGAGAGTGCTAGAAGGTATTTTGACGAGATGCCAGAGAAAACTGTAGTCTCGTGGAATGCCATGCTATCAGCTTATGCTCAAAATGAATGTGCAGAAGAGGCTTTGAAATTGTTCCATCGAATGCTGAAAGAGGGAATCACTCCTGATGATACAACATGGGTAGCTGCAATTTCATCGTGCTCTTCCATCGGCAATCCTAACCTTGCTGATTCACTTCTAGCAAAGATTAACCAAAAGCACGTCATTTTGAATAATTATGTCAAAACGGCTTTACTTGACATGCATGCAAAATTTGGTAACCTTGAAATTGCTAGAAGAATTTTTGATGAATTGGGAGGATTTGCAGCCAATGGTCATGGGAAGGATGCTATCAAGTTACTGTTAACAATGGAAGAAGAAGGCATTGAACCAGACAATGTCACATATATTGGTGTTTTGACTGCATGTAGTCATGCAGGAATGCTGAAAGAAGGTAAAAACATCTTTAAGTCAATTAAAGCACCTACCGTGGATCACTATGCTTGTATGGTTGATTTATTAGGAAGAGCAGGTGAATTAGATGAAGCCAAAATATTAATTGAATCTATGCCAATGAAACCTCACGCTGGTGTTTATGGCTCTTTGTTAAATGGCAGTCGAATTCACAAGAGAGTTGAGCTGGGAGAACTTGCTGCTAACAAGCTCTTAGAGCTTGAACCTCAAAACCCAGGAAATTATATTTTACTTTCTAATATATATGCCTCTGCTGGAAGATGGGAAGATGTTAGACAGGTTAGAGAGAAGATGAGGAAGGGAGGTGTCAAGAAATCAGTTGGAATGAGTTGGGTGGAATATAAGGGTCAAATACATAATTTCACTGTGGGTGATAGATCGCATGAATGGTCAAAAGATATTTATCGATTATTGGCTGAACTTGAAAGGAAGATGAAGAGGGTTGGCTTTGTAACTGATAAAAGTTGTGCACTGCGAGATGTTGAGGAGGAAGAGAAGGAAGAAATGCTGGGGACTCACAGTGAGAAGTTGGCCATTTGTTTTGCTCTTCTTGTCAGTGAAGTGGGGACACCAATTAGAGTGGTGAAAAATTTGAGAATTTTGAAGGGATATGTTCTTGCCATGATTACTGGTAAATTGGCGAAGAGCAAATTTATGGATAAAATTCATTTGCATAAAGAGAGATTATCTGAGTATGACACACTCGGAACGTCAGTCAAAGCAGCACTGGTTTACCTTGGAACGGCCTTAGTAAAGCTTGTCTGCCTTGCAACCTTCCTTAACGTGTCAGAGAATGACTCCTTTGACCTATATCAGGAACTGTTGAAAGCGCTTATTGGTTTAATAGATGTTGCCGGACTTTACTTCGCTTTGACCCAGTTGACTTACCGGAACATTTCTCAGAACCATAAATTTCAGGCAGTTGGACTGGGTTGGGCATTCGCTGATTCTGTTTTGCATAGACTTGCACCACTTTGGATTGGTGCCAGAGGACTAGAGTTTACTTGGGATTACATTTTGCAGGGCCTTGAAGCTAATGCAAATCTGGTGTTGAGCATATCCCTTGCTGCATTGGGATCTTTGATGTGGCTTCGGAAGAACAAACCCAAAGCGCTAATTCCCATAATTTATATCTGTGCACTGATTGTGGCTACTATGCCATCAATCACAAGCTACTTAAGGCGGGGAATGGGTTGGCATTTCCCTAAGGTGGTGGGATTTGAACTCTTCACCTCTTTGGCGATGGCTTTTATTAGTTGGCAGCTTTTTTCTGCTTGTCAGAGACCCTCTGTTTAAGGTTATGGCACACGGGTTGACTATATTGAGGCCGGACGTGAATTTTGGAGGTGTGGATTGCAGATCTCCTTTTACTTAACCTTCTCTTTTGCAGTGTTCCGCCTAATTTCGTTATCATTTGCAAAACCAAATTGTGGGGTTAAGTTTCAGATGTTGTAAGGTTGTAAGCTTTGTAATGTATGATGACAGGTAAAAGGGAGTTTCAGATGTTGTAACGTTTAGTTCTTTTTCTTTTGAGATTTTGACTGGAAGTAAAAGGTAGCTTGCCAGGACAATGTTATCTCATTTTCCTTTCCCTACCCTCCCTTCCATTCTTTTACTGAGGAACATGATTACACAGATGGAAGAGGTTACCTCAGATCAA

Coding sequence (CDS)

ATGACGGTGTTTCATTTCTTCAACTGTGCGATTCTCACTTTCGGTCCTCATGCTGTCTACTACTCTGCAACGCCCTTAGTAGTGGAACGGTTTGTATTCCCAGTGCCACGTTCTGATTTCTACCATAACTACTGGGTTTCTCTGCTCCTCACTATCTGTACTCGTCTTCACGCTCATCCTTCCTATGCGGCTTCTATTTTTACCTCCTCGCCCTACCCCAATGCTTCTGTTTACAGTTGTATGCTCAAATATTACTCCCGCATGGGTGCCCACGACGAGGTGGTTTCTCTCTTCCGATGCATGCAGTGTCTAGACCTCAGGCCCCATCCCTCTGTTTATATATACTTGATTAAGTTAGCTGGGAAATCTGGCAATTTGTTCCATGCTTCTGTCCTGAAGTTGGGTCATATTGACGACCACTTCATCCGTAATGCTGTATTGGATATGTATGCAAAATATGGACAAGTGGATCTTGCCAGGAAGTTGTTTGAGCAAATGCCTAATAGAACTCTAGCGGACTGGAATTCAATGATTTCTGGCTGTTGGAATTCGGGAAATGAAGCTGATGCAGTCATGCTGTTTAATATGATGCCTGATAGGAATACTATTTCATGGACTGCCATGGTTACTGGGTATGCTAAGAGGAGGGACTTGGAGAGTGCTAGAAGGTATTTTGACGAGATGCCAGAGAAAACTGTAGTCTCGTGGAATGCCATGCTATCAGCTTATGCTCAAAATGAATGTGCAGAAGAGGCTTTGAAATTGTTCCATCGAATGCTGAAAGAGGGAATCACTCCTGATGATACAACATGGGTAGCTGCAATTTCATCGTGCTCTTCCATCGGCAATCCTAACCTTGCTGATTCACTTCTAGCAAAGATTAACCAAAAGCACGTCATTTTGAATAATTATGTCAAAACGGCTTTACTTGACATGCATGCAAAATTTGGTAACCTTGAAATTGCTAGAAGAATTTTTGATGAATTGGGAGGATTTGCAGCCAATGGTCATGGGAAGGATGCTATCAAGTTACTGTTAACAATGGAAGAAGAAGGCATTGAACCAGACAATGTCACATATATTGGTGTTTTGACTGCATGTAGTCATGCAGGAATGCTGAAAGAAGGTAAAAACATCTTTAAGTCAATTAAAGCACCTACCGTGGATCACTATGCTTGTATGGTTGATTTATTAGGAAGAGCAGGTGAATTAGATGAAGCCAAAATATTAATTGAATCTATGCCAATGAAACCTCACGCTGGTGTTTATGGCTCTTTGTTAAATGGCAGTCGAATTCACAAGAGAGTTGAGCTGGGAGAACTTGCTGCTAACAAGCTCTTAGAGCTTGAACCTCAAAACCCAGGAAATTATATTTTACTTTCTAATATATATGCCTCTGCTGGAAGATGGGAAGATGTTAGACAGGTTAGAGAGAAGATGAGGAAGGGAGGTGTCAAGAAATCAGTTGGAATGAGTTGGGTGGAATATAAGGGTCAAATACATAATTTCACTGTGGGTGATAGATCGCATGAATGGTCAAAAGATATTTATCGATTATTGGCTGAACTTGAAAGGAAGATGAAGAGGGTTGGCTTTGTAACTGATAAAAGTTGTGCACTGCGAGATGTTGAGGAGGAAGAGAAGGAAGAAATGCTGGGGACTCACAGTGAGAAGTTGGCCATTTGTTTTGCTCTTCTTGTCAGTGAAGTGGGGACACCAATTAGAGTGGTGAAAAATTTGAGAATTTTGAAGGGATATGTTCTTGCCATGATTACTGGTAAATTGGCGAAGAGCAAATTTATGGATAAAATTCATTTGCATAAAGAGAGATTATCTGAGTATGACACACTCGGAACGTCAGTCAAAGCAGCACTGGTTTACCTTGGAACGGCCTTAGTAAAGCTTGTCTGCCTTGCAACCTTCCTTAACGTGTCAGAGAATGACTCCTTTGACCTATATCAGGAACTGTTGAAAGCGCTTATTGGTTTAATAGATGTTGCCGGACTTTACTTCGCTTTGACCCAGTTGACTTACCGGAACATTTCTCAGAACCATAAATTTCAGGCAGTTGGACTGGGTTGGGCATTCGCTGATTCTGTTTTGCATAGACTTGCACCACTTTGGATTGGTGCCAGAGGACTAGAGTTTACTTGGGATTACATTTTGCAGGGCCTTGAAGCTAATGCAAATCTGGTGTTGAGCATATCCCTTGCTGCATTGGGATCTTTGATGTGGCTTCGGAAGAACAAACCCAAAGCGCTAATTCCCATAATTTATATCTGTGCACTGATTGTGGCTACTATGCCATCAATCACAAGCTACTTAAGGCGGGGAATGGGTTGGCATTTCCCTAAGGTGGTGGGATTTGAACTCTTCACCTCTTTGGCGATGGCTTTTATTAGTTGGCAGCTTTTTTCTGCTTGTCAGAGACCCTCTGTTTAA

Protein sequence

MTVFHFFNCAILTFGPHAVYYSATPLVVERFVFPVPRSDFYHNYWVSLLLTICTRLHAHPSYAASIFTSSPYPNASVYSCMLKYYSRMGAHDEVVSLFRCMQCLDLRPHPSVYIYLIKLAGKSGNLFHASVLKLGHIDDHFIRNAVLDMYAKYGQVDLARKLFEQMPNRTLADWNSMISGCWNSGNEADAVMLFNMMPDRNTISWTAMVTGYAKRRDLESARRYFDEMPEKTVVSWNAMLSAYAQNECAEEALKLFHRMLKEGITPDDTTWVAAISSCSSIGNPNLADSLLAKINQKHVILNNYVKTALLDMHAKFGNLEIARRIFDELGGFAANGHGKDAIKLLLTMEEEGIEPDNVTYIGVLTACSHAGMLKEGKNIFKSIKAPTVDHYACMVDLLGRAGELDEAKILIESMPMKPHAGVYGSLLNGSRIHKRVELGELAANKLLELEPQNPGNYILLSNIYASAGRWEDVRQVREKMRKGGVKKSVGMSWVEYKGQIHNFTVGDRSHEWSKDIYRLLAELERKMKRVGFVTDKSCALRDVEEEEKEEMLGTHSEKLAICFALLVSEVGTPIRVVKNLRILKGYVLAMITGKLAKSKFMDKIHLHKERLSEYDTLGTSVKAALVYLGTALVKLVCLATFLNVSENDSFDLYQELLKALIGLIDVAGLYFALTQLTYRNISQNHKFQAVGLGWAFADSVLHRLAPLWIGARGLEFTWDYILQGLEANANLVLSISLAALGSLMWLRKNKPKALIPIIYICALIVATMPSITSYLRRGMGWHFPKVVGFELFTSLAMAFISWQLFSACQRPSV
Homology
[Close]
BLAST of Carg10573 vs. NCBI nr
Match: XP_022941407.1 (pentatricopeptide repeat-containing protein At1g14470 [Cucurbita moschata])

HSP 1 Score: 855.5 bits (2209), Expect = 1.5e-244
Identity = 537/686 (78.28%), Postives = 538/686 (78.43%), Query Frame = 0 

Query: 43  NYWVSLLLTICTRLHAHPSYAASIFTSSPYPNASVYSCMLKYYSRMGAHDEVVSLFRCMQ 102
           NYWVSLLLTICTRLHAHPSYAASIFTSSPYPNASVYSCMLKYYSRMGAHDEVVSLFRCMQ
Sbjct: 33  NYWVSLLLTICTRLHAHPSYAASIFTSSPYPNASVYSCMLKYYSRMGAHDEVVSLFRCMQ 92

Query: 103 CLDLRPHPSVYIYLIKLAGKSGNLFHASVLKLGHIDDHFIRNAVLDMYAKYGQVDLARKL 162
           CLDLRPHPSVYIYLIKLAGKSGNLFHASVLKLGHIDDHFIRNAVLDMYAKYGQVDLARKL
Sbjct: 93  CLDLRPHPSVYIYLIKLAGKSGNLFHASVLKLGHIDDHFIRNAVLDMYAKYGQVDLARKL 152

Query: 163 FEQMPNRTLADWNSMISGCWNSGNEADXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 222
           FEQMPNRTLADWNSMISGCWNSGNEADXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 153 FEQMPNRTLADWNSMISGCWNSGNEADXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 212

Query: 223 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGITPDDTTWVAAISSCSSIG 282
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  TPDDTTWVAAISSCSSIG
Sbjct: 213 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTPDDTTWVAAISSCSSIG 272

Query: 283 NPNLADSLLAKINQKHVILNNYVKTALLDMHAKFGNLEIARRIFDELG------------ 342
           NPNLADSLLAKINQKHVILNNYVKTALLDMHAKFGNLEIARRIFDELG            
Sbjct: 273 NPNLADSLLAKINQKHVILNNYVKTALLDMHAKFGNLEIARRIFDELGGQRNAVTWNVMI 332

Query: 343 ------------------------------------------------------------ 402
                                                                       
Sbjct: 333 SAYTRAGKLSLARELFDNMPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIDCTDIQPDE 392

Query: 403 ------------------------------------------------------------ 462
                                                                       
Sbjct: 393 VTIASVLSACGHIGALKFSYWVLNIVQEKNIKFGISGFNSLIFMYSKCGNVVDAHRIFQN 452

Query: 463 --------------GFAANGHGKDAIKLLLTMEEEGIEPDNVTYIGVLTACSHAGMLKEG 522
                         GFAANGHGKDAIKLLLTMEEEGIEPD+VTYIGVLTACSHAGMLKEG
Sbjct: 453 MGTKDVVTFNTLISGFAANGHGKDAIKLLLTMEEEGIEPDHVTYIGVLTACSHAGMLKEG 512

Query: 523 KNIFKSIKAPTVDHYACMVDLLGRAGELDEAKILIESMPMKPHAGVYGSLLNGSRIHKRV 582
           KNIFKSIKAPTVDHYACMVDLLGRAGELDEAKILIESMPMKPHAGVYGSLLNGSRIHKRV
Sbjct: 513 KNIFKSIKAPTVDHYACMVDLLGRAGELDEAKILIESMPMKPHAGVYGSLLNGSRIHKRV 572

[Close]
BLAST of Carg10573 vs. NCBI nr
Match: XP_023523920.1 (pentatricopeptide repeat-containing protein At1g14470 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 854.0 bits (2205), Expect = 4.2e-244
Identity = 535/686 (77.99%), Postives = 538/686 (78.43%), Query Frame = 0 

Query: 43  NYWVSLLLTICTRLHAHPSYAASIFTSSPYPNASVYSCMLKYYSRMGAHDEVVSLFRCMQ 102
           NYWVSLLLTICTRLHAHPSYAASIFTSSPYPNASVYSCMLKYYSRMGAHDEVVSLFRCMQ
Sbjct: 33  NYWVSLLLTICTRLHAHPSYAASIFTSSPYPNASVYSCMLKYYSRMGAHDEVVSLFRCMQ 92

Query: 103 CLDLRPHPSVYIYLIKLAGKSGNLFHASVLKLGHIDDHFIRNAVLDMYAKYGQVDLARKL 162
           CLDLRPHPSVYIYLIKLAGKSGNLFHASVLKLGHIDDHFIRNA+LDMYAKYGQVDLARKL
Sbjct: 93  CLDLRPHPSVYIYLIKLAGKSGNLFHASVLKLGHIDDHFIRNAILDMYAKYGQVDLARKL 152

Query: 163 FEQMPNRTLADWNSMISGCWNSGNEADXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 222
           FEQMPNRTLADWNSMISGCWNSGNEADXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 153 FEQMPNRTLADWNSMISGCWNSGNEADXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 212

Query: 223 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGITPDDTTWVAAISSCSSIG 282
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  TPDDTTWVAAISSCSSIG
Sbjct: 213 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTPDDTTWVAAISSCSSIG 272

Query: 283 NPNLADSLLAKINQKHVILNNYVKTALLDMHAKFGNLEIARRIFDELG------------ 342
           NPNLADSLLAKINQKHVILNNYVKTALLDMHAKFGNLEIARRIFDELG            
Sbjct: 273 NPNLADSLLAKINQKHVILNNYVKTALLDMHAKFGNLEIARRIFDELGGQRNAVTWNVMI 332

Query: 343 ------------------------------------------------------------ 402
                                                                       
Sbjct: 333 SAYTRAGKLSLARELFDNMPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIDCTDIQPDE 392

Query: 403 ------------------------------------------------------------ 462
                                                                       
Sbjct: 393 VTIASVLSACGHIGALKFSYWVLNIVQEKNIKFGISGFNSLIFMYSKCGNVVDAHRIFQN 452

Query: 463 --------------GFAANGHGKDAIKLLLTMEEEGIEPDNVTYIGVLTACSHAGMLKEG 522
                         GFAANGHGKDAIKLLLTMEEEGIEPD+VTYIGVLTACSHAGMLKEG
Sbjct: 453 MGTKDVVTFNTLISGFAANGHGKDAIKLLLTMEEEGIEPDHVTYIGVLTACSHAGMLKEG 512

Query: 523 KNIFKSIKAPTVDHYACMVDLLGRAGELDEAKILIESMPMKPHAGVYGSLLNGSRIHKRV 582
           KNIFKSIKAPTVDHYACMVDLLGRAGELDEAK+LIESMPMKPHAGVYGSLLNGSRIHKRV
Sbjct: 513 KNIFKSIKAPTVDHYACMVDLLGRAGELDEAKMLIESMPMKPHAGVYGSLLNGSRIHKRV 572

[Close]
BLAST of Carg10573 vs. NCBI nr
Match: XP_022982206.1 (pentatricopeptide repeat-containing protein At1g14470 [Cucurbita maxima])

HSP 1 Score: 839.0 bits (2166), Expect = 1.4e-239
Identity = 528/686 (76.97%), Postives = 534/686 (77.84%), Query Frame = 0 

Query: 43  NYWVSLLLTICTRLHAHPSYAASIFTSSPYPNASVYSCMLKYYSRMGAHDEVVSLFRCMQ 102
           NYWVSLLLTICTRLHAHP+YAASIFTSSPYPNASVYSCMLKYYSRMGAHDEVVSLFRCMQ
Sbjct: 33  NYWVSLLLTICTRLHAHPAYAASIFTSSPYPNASVYSCMLKYYSRMGAHDEVVSLFRCMQ 92

Query: 103 CLDLRPHPSVYIYLIKLAGKSGNLFHASVLKLGHIDDHFIRNAVLDMYAKYGQVDLARKL 162
           CLDLRPHPSVYIYLIKLAGKSGNLFHASVLKLGHIDDHFIRN +LDMYAKYGQVDLARKL
Sbjct: 93  CLDLRPHPSVYIYLIKLAGKSGNLFHASVLKLGHIDDHFIRNTILDMYAKYGQVDLARKL 152

Query: 163 FEQMPNRTLADWNSMISGCWNSGNEADXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 222
           FEQMPNRTLADWNSMISGCWNSGNEADXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 153 FEQMPNRTLADWNSMISGCWNSGNEADXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 212

Query: 223 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGITPDDTTWVAAISSCSSIG 282
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  TPDDTTWVAAISSCSSIG
Sbjct: 213 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTPDDTTWVAAISSCSSIG 272

Query: 283 NPNLADSLLAKINQKHVILNNYVKTALLDMHAKFGNLEIARRIFDELG------------ 342
           N +LADSLLAKINQKHVILNN+VKTALLDMHAKFGNLEIAR IFDELG            
Sbjct: 273 NLSLADSLLAKINQKHVILNNFVKTALLDMHAKFGNLEIARGIFDELGGQRNAVTWNVMI 332

Query: 343 ------------------------------------------------------------ 402
                                                                       
Sbjct: 333 SAYTRAGKLSLARELFDNMPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIDCTDIQPDE 392

Query: 403 ------------------------------------------------------------ 462
                                                                       
Sbjct: 393 VTIASVLSACGHIGALKFSCWVLNIVQEKNIKFGISGFNSLIFMYSKCGNVVDAHRIFQN 452

Query: 463 --------------GFAANGHGKDAIKLLLTMEEEGIEPDNVTYIGVLTACSHAGMLKEG 522
                         GFAANGHGKDAIKLLLTMEEEGIEPD+VTYIGVLTACSHAGMLKEG
Sbjct: 453 MGTKDVVTFNTLISGFAANGHGKDAIKLLLTMEEEGIEPDHVTYIGVLTACSHAGMLKEG 512

Query: 523 KNIFKSIKAPTVDHYACMVDLLGRAGELDEAKILIESMPMKPHAGVYGSLLNGSRIHKRV 582
           KNIFKSIKAPTVDHYACMVDLLGRAGELD+AKILIESMPMKPHAGVYGSLLN SRIHKRV
Sbjct: 513 KNIFKSIKAPTVDHYACMVDLLGRAGELDDAKILIESMPMKPHAGVYGSLLNASRIHKRV 572

[Close]
BLAST of Carg10573 vs. NCBI nr
Match: XP_022133377.1 (pentatricopeptide repeat-containing protein At1g14470-like isoform X1 [Momordica charantia])

HSP 1 Score: 741.9 bits (1914), Expect = 2.3e-210
Identity = 476/687 (69.29%), Postives = 503/687 (73.22%), Query Frame = 0 

Query: 42  HNYWVSLLLTICTRLHAHPSYAASIFTSSPYPNASVYSCMLKYYSRMGAHDEVVSLFRCM 101
           HNYWVSLL+T+CT L AHP+YAASIFTSS  P+ SVYSCMLKYYSRMGAH+EVVS+FRCM
Sbjct: 32  HNYWVSLLITLCTHLQAHPAYAASIFTSSTSPSVSVYSCMLKYYSRMGAHNEVVSIFRCM 91

Query: 102 QCLDLRPHPSVYIYLIKLAGKSGNLFHASVLKLGHIDDHFIRNAVLDMYAKYGQVDLARK 161
           QCLDLRPHP VYIYLIKLAGKSGNLFHA VLKLGHIDDHF+RNA+LDMYAKYGQVDLARK
Sbjct: 92  QCLDLRPHPFVYIYLIKLAGKSGNLFHAYVLKLGHIDDHFVRNAILDMYAKYGQVDLARK 151

Query: 162 LFEQMPNRTLADWNSMISGCWNSGNEADXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 221
           LFEQM +RTLADW               XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 152 LFEQMADRTLADWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 211

Query: 222 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGITPDDTTWVAAISSCSSI 281
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   PDDTTWVAAISSCSS+
Sbjct: 212 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPDDTTWVAAISSCSSV 271

Query: 282 GNPNLADSLLAKINQKHVILNNYVKTALLDMHAKFGNLEIARRIFDELG----------- 341
           GNP+LAD ++ KINQKH+ILNN+VKTALLDMHAKFGNLEIAR IFDELG           
Sbjct: 272 GNPSLADYIIRKINQKHIILNNFVKTALLDMHAKFGNLEIAREIFDELGGQRNAVTWNIM 331

Query: 342 ------------------------------------------------------------ 401
                                                                       
Sbjct: 332 ISAYTRSGKLLLARELFDNMPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXITCTDIQPD 391

Query: 402 ------------------------------------------------------------ 461
                                                                       
Sbjct: 392 EVTIASVLSACGHIGASKLSYLVVNIVQEKNIKLGISAFNSLIFMYSKCGNMAHAHRIFQ 451

Query: 462 ---------------GFAANGHGKDAIKLLLTMEEEGIEPDNVTYIGVLTACSHAGMLKE 521
                          GFAANG GK+AI+L+L MEEEGIEPD+VTYIGVLTACSHAG+LKE
Sbjct: 452 NMGTRDVVTFNTLISGFAANGRGKEAIELVLKMEEEGIEPDHVTYIGVLTACSHAGLLKE 511

Query: 522 GKNIFKSIKAPTVDHYACMVDLLGRAGELDEAKILIESMPMKPHAGVYGSLLNGSRIHKR 581
           GKNIFKSIKAPTVDHYACMVDLLGRAGELDEAKILI+SMPMKPHAGVYGSLLN SRIHKR
Sbjct: 512 GKNIFKSIKAPTVDHYACMVDLLGRAGELDEAKILIQSMPMKPHAGVYGSLLNASRIHKR 571

Query: 582 VELGELAANKLLELEPQNPGNYILLSNIYASAGRWEDVRQVREKMRKGGVKKSVGMSWVE 583
           VELGELAANKL ELEPQNPGNY+LLSNIYASAGRWEDV+ VREKM+K GVKKSVGMSWVE
Sbjct: 572 VELGELAANKLFELEPQNPGNYVLLSNIYASAGRWEDVKMVREKMKKVGVKKSVGMSWVE 631

[Close]
BLAST of Carg10573 vs. NCBI nr
Match: XP_004147828.1 (PREDICTED: pentatricopeptide repeat-containing protein At1g14470 [Cucumis sativus])

HSP 1 Score: 721.5 bits (1861), Expect = 3.3e-204
Identity = 468/687 (68.12%), Postives = 499/687 (72.63%), Query Frame = 0 

Query: 42  HNYWVSLLLTICTRLHAHPSYAASIFTSSPYPNASVYSCMLKYYSRMGAHDEVVSLFRCM 101
           HNYWVSLLL  CTRLHAHP+Y  SIFTSSP P+ASVYSCMLKYYSRMGAH++VVSLF+C 
Sbjct: 32  HNYWVSLLLINCTRLHAHPAYVDSIFTSSPSPDASVYSCMLKYYSRMGAHNQVVSLFKCT 91

Query: 102 QCLDLRPHPSVYIYLIKLAGKSGNLFHASVLKLGHIDDHFIRNAVLDMYAKYGQVDLARK 161
             L+LRP P VYIYLIKLAGKSGNLFHA VLKLGHIDDHFIRNA+LDMYAK GQVDLAR 
Sbjct: 92  HSLNLRPQPFVYIYLIKLAGKSGNLFHAYVLKLGHIDDHFIRNAILDMYAKNGQVDLARN 151

Query: 162 LFEQMPNRTLADWNSMISGCWNSGNEADXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 221
           LFEQM  RTLADWNSMISGC        XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 152 LFEQMAERTLADWNSMISGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 211

Query: 222 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGITPDDTTWVAAISSCSSI 281
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  TPDDTTWV  ISSCSSI
Sbjct: 212 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTPDDTTWVVTISSCSSI 271

Query: 282 GNPNLADSLLAKINQKHVILNNYVKTALLDMHAKFGNLEIARRIFDELG----------- 341
           G+P LADS+L  I+QKH++LN++VKTALLDMHAKFGNLEIAR IFDELG           
Sbjct: 272 GDPTLADSILRMIDQKHIVLNSFVKTALLDMHAKFGNLEIARNIFDELGSQRNAVTWNIM 331

Query: 342 ------------------------------------------------------------ 401
                                                                       
Sbjct: 332 ISAYTRVXXXXXXXXXXXNMPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXISCMDIQPD 391

Query: 402 ------------------------------------------------------------ 461
                                                                       
Sbjct: 392 EVTIASVLSACGHIGALKLSYWVLDIVREKNIKLGISGFNSLIFMYSKCGSVADAHRIFQ 451

Query: 462 ---------------GFAANGHGKDAIKLLLTMEEEGIEPDNVTYIGVLTACSHAGMLKE 521
                          GFAANGHGK+AIKL+LTMEEEGIEPD+VTYIGVLTACSHAG+L E
Sbjct: 452 TMGTRDVVSFNTLISGFAANGHGKEAIKLVLTMEEEGIEPDHVTYIGVLTACSHAGLLNE 511

Query: 522 GKNIFKSIKAPTVDHYACMVDLLGRAGELDEAKILIESMPMKPHAGVYGSLLNGSRIHKR 581
           GKN+FKSI+APTVDHYACMVDLLGRAGELDEAK+LI+SMPMKPHAGVYGSLLN SRIHKR
Sbjct: 512 GKNVFKSIQAPTVDHYACMVDLLGRAGELDEAKMLIQSMPMKPHAGVYGSLLNASRIHKR 571

Query: 582 VELGELAANKLLELEPQNPGNYILLSNIYASAGRWEDVRQVREKMRKGGVKKSVGMSWVE 583
           V LGELAA+KL ELEPQN GNY+LLSNIYAS GRWEDV++VRE M+KGG+KKSVGMSWVE
Sbjct: 572 VGLGELAASKLFELEPQNLGNYVLLSNIYASFGRWEDVKRVREMMKKGGLKKSVGMSWVE 631

[Close]
BLAST of Carg10573 vs. TAIR10
Match: AT1G47640.1 (unknown protein)

HSP 1 Score: 350.1 bits (897), Expect = 3.6e-96
Identity = 172/203 (84.73%), Postives = 186/203 (91.63%), Query Frame = 0 

Query: 611 LSEYDTLGTSVKAALVYLGTALVKLVCLATFLNVSENDSFDLYQELLKALIGLIDVAGLY 670
           LSEYDTLGTSVKAA+VYL TALVKLVCLATFL VSE + FD YQE LKA+IG IDVAGLY
Sbjct: 26  LSEYDTLGTSVKAAVVYLATALVKLVCLATFLQVSETEVFDPYQEALKAMIGFIDVAGLY 85

Query: 671 FALTQLTYRNISQNHKFQAVGLGWAFADSVLHRLAPLWIGARGLEFTWDYILQGLEANAN 730
           +AL QLT+RNISQNHKFQAVGLGWAFADSVLHRLAPLW+GARGLEFTWDY+LQGLEANAN
Sbjct: 86  YALAQLTHRNISQNHKFQAVGLGWAFADSVLHRLAPLWVGARGLEFTWDYVLQGLEANAN 145

Query: 731 LVLSISLAALGSLMWLRKNKPKALIPIIYICALIVATMPSITSYLRRGMGWHFPKVVGFE 790
           LV +ISLAALGSLMWLRKNKPK+LIPIIY CA+I+ATMPSITSYL+R  GWHFPK+VGFE
Sbjct: 146 LVFTISLAALGSLMWLRKNKPKSLIPIIYTCAVIIATMPSITSYLKRVNGWHFPKIVGFE 205

Query: 791 LFTSLAMAFISWQLFSACQRPSV 814
           L TSL MAFIS QLF  CQRPS+
Sbjct: 206 LATSLVMAFISCQLFILCQRPSL 228


HSP 2 Score: 58.2 bits (139), Expect = 2.8e-08
Identity = 25/26 (96.15%), Postives = 26/26 (100.00%), Query Frame = 0 

Query: 1  MTVFHFFNCAILTFGPHAVYYSATPL 27
          MT+FHFFNCAILTFGPHAVYYSATPL
Sbjct: 1  MTLFHFFNCAILTFGPHAVYYSATPL 26

[Close]
BLAST of Carg10573 vs. TAIR10
Match: AT2G01510.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 304.3 bits (778), Expect = 2.3e-82
Identity = 182/544 (33.46%), Postives = 273/544 (50.18%), Query Frame = 0 

Query: 62  YAASIFTSSPYPNASVYSCMLKYYSRMGAHDEVVSLFRCMQCLDLRPHPSVYIYLIKLAG 121
           YA  +F     P   +++ + K Y R     E + L++ M+ L +RP    Y +++K   
Sbjct: 61  YARQVFDEMHKPRIFLWNTLFKGYVRNQLPFESLLLYKKMRDLGVRPDEFTYPFVVKAIS 120

Query: 122 KSGNL-----FHASVLKLGHIDDHFIRNAVLDMYAKYGQVDLARKLFEQMPNRTLADWNS 181
           + G+       HA V+K G      +   ++ MY K+G++  A  LFE M  + L  WN+
Sbjct: 121 QLGDFSCGFALHAHVVKYGFGCLGIVATELVMMYMKFGELSSAEFLFESMQVKDLVAWNA 180

Query: 182 MISGCWNSGNEADXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 241
            ++ C  +GN A                                                
Sbjct: 181 FLAVCVQTGNSA------------------------------------------------ 240

Query: 242 XXXXXXXXXXXXXXXXXXXXXXXXXXGITPDDTTWVAAISSCSSIGNPNLADSLLAKINQ 301
                                      +  D  T V+ +S+C  +G+  + + +  +  +
Sbjct: 241 --------------IALEYFNKMCADAVQFDSFTVVSMLSACGQLGSLEIGEEIYDRARK 300

Query: 302 KHVILNNYVKTALLDMHAKFGNLEIARRIFDELG------------GFAANGHGKDAIKL 361
           + +  N  V+ A LDMH K GN E AR +F+E+             G+A NG  ++A+ L
Sbjct: 301 EEIDCNIIVENARLDMHLKCGNTEAARVLFEEMKQRNVVSWSTMIVGYAMNGDSREALTL 360

Query: 362 LLTMEEEGIEPDNVTYIGVLTACSHAGMLKEGKNIFKSI-------KAPTVDHYACMVDL 421
             TM+ EG+ P+ VT++GVL+ACSHAG++ EGK  F  +         P  +HYACMVDL
Sbjct: 361 FTTMQNEGLRPNYVTFLGVLSACSHAGLVNEGKRYFSLMVQSNDKNLEPRKEHYACMVDL 420

Query: 422 LGRAGELDEAKILIESMPMKPHAGVYGSLLNGSRIHKRVELGELAANKLLELEPQNPGNY 481
           LGR+G L+EA   I+ MP++P  G++G+LL    +H+ + LG+  A+ L+E  P     +
Sbjct: 421 LGRSGLLEEAYEFIKKMPVEPDTGIWGALLGACAVHRDMILGQKVADVLVETAPDIGSYH 480

Query: 482 ILLSNIYASAGRWEDVRQVREKMRKGGVKKSVGMSWVEYKGQIHNFTVGDRSHEWSKDIY 541
           +LLSNIYA+AG+W+ V +VR KMRK G KK    S VE++G+IH F  GD+SH  SK IY
Sbjct: 481 VLLSNIYAAAGKWDCVDKVRSKMRKLGTKKVAAYSSVEFEGKIHFFNRGDKSHPQSKAIY 540

Query: 542 RLLAELERKMKRVGFVTDKSCALRDVEEEEKEEMLGTHSEKLAICFALLVSEVGTPIRVV 582
             L E+ +K++++G+V D      DVE EEKE  L  HSEKLAI F L+    G PIRV+
Sbjct: 541 EKLDEILKKIRKMGYVPDTCSVFHDVEMEEKECSLSHHSEKLAIAFGLIKGRPGHPIRVM 542

[Close]
BLAST of Carg10573 vs. TAIR10
Match: AT3G49142.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 293.1 bits (749), Expect = 5.2e-79
Identity = 181/553 (32.73%), Postives = 266/553 (48.10%), Query Frame = 0 

Query: 63  AASIFTSSPYPNASVYSCMLKYYSRMGAHDEVVSLFRCMQCLDLRPHPSVYIYLIKLAGK 122
           A  +F   P  N  + + M++ Y   G + E V +F  M   ++RP    +  ++K    
Sbjct: 93  ARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSC 152

Query: 123 SGNL-----FHASVLKLGHIDDHFIRNAVLDMYAKYGQVDLARKLFEQMPNRTLADWNSM 182
           SG +      H S  K+G     F+ N ++ MY K G +  AR + ++M  R +  WNS+
Sbjct: 153 SGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSL 212

Query: 183 ISGCWNSGNEAD------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 242
           + G   +    D                                                
Sbjct: 213 VVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTTTENVMYVKDMFFKMGKK 272

Query: 243 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGITPDDTTWVAAISSCSSIGNPNLADSLL 302
                                          G  PD  +  + + +C      +L   + 
Sbjct: 273 SLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIH 332

Query: 303 AKINQKHVILNNYVKTALLDMHAKFGNLEIARRIFDE------------LGGFAANGHGK 362
             I +K +I N  ++ AL+DM+AK G LE AR +F+             +  +  +G G 
Sbjct: 333 GYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGC 392

Query: 363 DAIKLLLTMEEEGIEPDNVTYIGVLTACSHAGMLKEGKNIFKSIK-----APTVDHYACM 422
           DA+ L   +++ G+ PD++ ++  L ACSHAG+L+EG++ FK +       P ++H ACM
Sbjct: 393 DAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACM 452

Query: 423 VDLLGRAGELDEAKILIESMPMKPHAGVYGSLLNGSRIHKRVELGELAANKLLELEPQNP 482
           VDLLGRAG++ EA   I+ M M+P+  V+G+LL   R+H   ++G LAA+KL +L P+  
Sbjct: 453 VDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAADKLFQLAPEQS 512

Query: 483 GNYILLSNIYASAGRWEDVRQVREKMRKGGVKKSVGMSWVEYKGQIHNFTVGDRSHEWSK 542
           G Y+LLSNIYA AGRWE+V  +R  M+  G+KK+ G S VE    IH F VGDRSH  S 
Sbjct: 513 GYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGASNVEVNRIIHTFLVGDRSHPQSD 572

Query: 543 DIYRLLAELERKMKRVGFVTDKSCALRDVEEEEKEEMLGTHSEKLAICFALL-----VSE 583
           +IYR L  L +KMK +G+V D   AL DVEEE+KE  L  HSEKLAI FAL+       +
Sbjct: 573 EIYRELDVLVKKMKELGYVPDSESALHDVEEEDKETHLAVHSEKLAIVFALMNTKEEEED 632

[Close]
BLAST of Carg10573 vs. TAIR10
Match: AT3G13770.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 292.7 bits (748), Expect = 6.8e-79
Identity = 174/544 (31.99%), Postives = 274/544 (50.37%), Query Frame = 0 

Query: 63  AASIFTSSPYPNASVYSCMLKYYSRMGAHDEVVSLFRCMQCLDLRPH----PSVYIYLIK 122
           A  +    P  N   ++ M+  YS+ G   E +++F  M   D +P+     +V    I+
Sbjct: 106 ARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIR 165

Query: 123 LAGKS-GNLFHASVLKLGHIDDHFIRNAVLDMYAKYGQVDLARKLFEQMPNRTLADWNSM 182
            +G   G   H  ++K  +    F+ +++LDMYAK GQ+  AR++FE +P R +    ++
Sbjct: 166 ASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAI 225

Query: 183 ISGCWNSGNEADXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 242
           I+G    G + +                                                
Sbjct: 226 IAGYAQLGLDEE------------------------------------------------ 285

Query: 243 XXXXXXXXXXXXXXXXXXXXXXXXXGITPDDTTWVAAISSCSSIGNPNLADSLLAKINQK 302
                                    G++P+  T+ + +++ S +   +        + ++
Sbjct: 286 --------------ALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRR 345

Query: 303 HVILNNYVKTALLDMHAKFGNLEIARRIFDE------------LGGFAANGHGKDAIKLL 362
            +     ++ +L+DM++K GNL  ARR+FD             L G++ +G G++ ++L 
Sbjct: 346 ELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELF 405

Query: 363 -LTMEEEGIEPDNVTYIGVLTACSHAGMLKEGKNIFKSIKA------PTVDHYACMVDLL 422
            L  +E+ ++PD VT + VL+ CSH  M   G NIF  + A      P  +HY C+VD+L
Sbjct: 406 RLMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDML 465

Query: 423 GRAGELDEAKILIESMPMKPHAGVYGSLLNGSRIHKRVELGELAANKLLELEPQNPGNYI 482
           GRAG +DEA   I+ MP KP AGV GSLL   R+H  V++GE    +L+E+EP+N GNY+
Sbjct: 466 GRAGRIDEAFEFIKRMPSKPTAGVLGSLLGACRVHLSVDIGESVGRRLIEIEPENAGNYV 525

Query: 483 LLSNIYASAGRWEDVRQVREKMRKGGVKKSVGMSWVEYKGQIHNFTVGDRSHEWSKDIYR 542
           +LSN+YASAGRW DV  VR  M +  V K  G SW++++  +H F   DR+H   +++  
Sbjct: 526 ILSNLYASAGRWADVNNVRAMMMQKAVTKEPGRSWIQHEQTLHYFHANDRTHPRREEVLA 585

Query: 543 LLAELERKMKRVGFVTDKSCALRDVEEEEKEEMLGTHSEKLAICFALLVSEVGTPIRVVK 583
            + E+  KMK+ G+V D SC L DV+EE+KE+ML  HSEKLA+ F L+ +  G PIRV K
Sbjct: 586 KMKEISIKMKQAGYVPDLSCVLYDVDEEQKEKMLLGHSEKLALTFGLIATGEGIPIRVFK 587

[Close]
BLAST of Carg10573 vs. TAIR10
Match: AT3G57430.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 289.7 bits (740), Expect = 5.8e-78
Identity = 186/559 (33.27%), Postives = 283/559 (50.63%), Query Frame = 0 

Query: 77  VYSCMLKYYSRMGAHDEVVSLFRCM-QCLDLRPHPSVYIYLIKLAGKSG-----NLFHAS 136
           +++ M+  YS+     E + LF  M +   L  + +    ++    +SG        H  
Sbjct: 371 LWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGF 430

Query: 137 VLKLGHIDDHFIRNAVLDMYAKYGQVDLARKLFEQMPNRTLADWNSMISGCWNSGNEADX 196
           V+K G   D F++N ++DMY++ G++D+A ++F +M +R L  WN+MI+G   S +  D 
Sbjct: 431 VVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHED- 490

Query: 197 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 256
                                                                       
Sbjct: 491 --------------------------------------------------ALLLLHKMQN 550

Query: 257 XXXXXXXXXXXXGITPDDTTWVAAISSCSSIGNPNLADSLLAKINQKH--VILNNY---- 316
                        + P+  T +  + SC+++       S LAK  + H   I NN     
Sbjct: 551 LERKVSKGASRVSLKPNSITLMTILPSCAAL-------SALAKGKEIHAYAIKNNLATDV 610

Query: 317 -VKTALLDMHAKFGNLEIARRIFDELG------------GFAANGHGKDAIKLLLTMEEE 376
            V +AL+DM+AK G L+++R++FD++              +  +G+G++AI LL  M  +
Sbjct: 611 AVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQ 670

Query: 377 GIEPDNVTYIGVLTACSHAGMLKEGKNIFKSIK-----APTVDHYACMVDLLGRAGELDE 436
           G++P+ VT+I V  ACSH+GM+ EG  IF  +K      P+ DHYAC+VDLLGRAG + E
Sbjct: 671 GVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKE 730

Query: 437 AKILIESMPMK-PHAGVYGSLLNGSRIHKRVELGELAANKLLELEPQNPGNYILLSNIYA 496
           A  L+  MP     AG + SLL  SRIH  +E+GE+AA  L++LEP    +Y+LL+NIY+
Sbjct: 731 AYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYS 790

Query: 497 SAGRWEDVRQVREKMRKGGVKKSVGMSWVEYKGQIHNFTVGDRSHEWSKDIYRLLAELER 556
           SAG W+   +VR  M++ GV+K  G SW+E+  ++H F  GD SH  S+ +   L  L  
Sbjct: 791 SAGLWDKATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLSGYLETLWE 850

Query: 557 KMKRVGFVTDKSCALRDVEEEEKEEMLGTHSEKLAICFALLVSEVGTPIRVVKNLRILKG 605
           +M++ G+V D SC L +VEE+EKE +L  HSEKLAI F +L +  GT IRV KNLR+   
Sbjct: 851 RMRKEGYVPDTSCVLHNVEEDEKEILLCGHSEKLAIAFGILNTSPGTIIRVAKNLRVCND 863

[Close]
BLAST of Carg10573 vs. Swiss-Prot
Match: sp|Q9ZVF4|PP140_ARATH (Pentatricopeptide repeat-containing protein At2g01510, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-H37 PE=3 SV=1)

HSP 1 Score: 304.3 bits (778), Expect = 4.1e-81
Identity = 182/544 (33.46%), Postives = 273/544 (50.18%), Query Frame = 0 

Query: 62  YAASIFTSSPYPNASVYSCMLKYYSRMGAHDEVVSLFRCMQCLDLRPHPSVYIYLIKLAG 121
           YA  +F     P   +++ + K Y R     E + L++ M+ L +RP    Y +++K   
Sbjct: 61  YARQVFDEMHKPRIFLWNTLFKGYVRNQLPFESLLLYKKMRDLGVRPDEFTYPFVVKAIS 120

Query: 122 KSGNL-----FHASVLKLGHIDDHFIRNAVLDMYAKYGQVDLARKLFEQMPNRTLADWNS 181
           + G+       HA V+K G      +   ++ MY K+G++  A  LFE M  + L  WN+
Sbjct: 121 QLGDFSCGFALHAHVVKYGFGCLGIVATELVMMYMKFGELSSAEFLFESMQVKDLVAWNA 180

Query: 182 MISGCWNSGNEADXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 241
            ++ C  +GN A                                                
Sbjct: 181 FLAVCVQTGNSA------------------------------------------------ 240

Query: 242 XXXXXXXXXXXXXXXXXXXXXXXXXXGITPDDTTWVAAISSCSSIGNPNLADSLLAKINQ 301
                                      +  D  T V+ +S+C  +G+  + + +  +  +
Sbjct: 241 --------------IALEYFNKMCADAVQFDSFTVVSMLSACGQLGSLEIGEEIYDRARK 300

Query: 302 KHVILNNYVKTALLDMHAKFGNLEIARRIFDELG------------GFAANGHGKDAIKL 361
           + +  N  V+ A LDMH K GN E AR +F+E+             G+A NG  ++A+ L
Sbjct: 301 EEIDCNIIVENARLDMHLKCGNTEAARVLFEEMKQRNVVSWSTMIVGYAMNGDSREALTL 360

Query: 362 LLTMEEEGIEPDNVTYIGVLTACSHAGMLKEGKNIFKSI-------KAPTVDHYACMVDL 421
             TM+ EG+ P+ VT++GVL+ACSHAG++ EGK  F  +         P  +HYACMVDL
Sbjct: 361 FTTMQNEGLRPNYVTFLGVLSACSHAGLVNEGKRYFSLMVQSNDKNLEPRKEHYACMVDL 420

Query: 422 LGRAGELDEAKILIESMPMKPHAGVYGSLLNGSRIHKRVELGELAANKLLELEPQNPGNY 481
           LGR+G L+EA   I+ MP++P  G++G+LL    +H+ + LG+  A+ L+E  P     +
Sbjct: 421 LGRSGLLEEAYEFIKKMPVEPDTGIWGALLGACAVHRDMILGQKVADVLVETAPDIGSYH 480

Query: 482 ILLSNIYASAGRWEDVRQVREKMRKGGVKKSVGMSWVEYKGQIHNFTVGDRSHEWSKDIY 541
           +LLSNIYA+AG+W+ V +VR KMRK G KK    S VE++G+IH F  GD+SH  SK IY
Sbjct: 481 VLLSNIYAAAGKWDCVDKVRSKMRKLGTKKVAAYSSVEFEGKIHFFNRGDKSHPQSKAIY 540

Query: 542 RLLAELERKMKRVGFVTDKSCALRDVEEEEKEEMLGTHSEKLAICFALLVSEVGTPIRVV 582
             L E+ +K++++G+V D      DVE EEKE  L  HSEKLAI F L+    G PIRV+
Sbjct: 541 EKLDEILKKIRKMGYVPDTCSVFHDVEMEEKECSLSHHSEKLAIAFGLIKGRPGHPIRVM 542

[Close]
BLAST of Carg10573 vs. Swiss-Prot
Match: sp|P0C899|PP271_ARATH (Putative pentatricopeptide repeat-containing protein At3g49142 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H77 PE=3 SV=1)

HSP 1 Score: 293.1 bits (749), Expect = 9.4e-78
Identity = 181/553 (32.73%), Postives = 266/553 (48.10%), Query Frame = 0 

Query: 63  AASIFTSSPYPNASVYSCMLKYYSRMGAHDEVVSLFRCMQCLDLRPHPSVYIYLIKLAGK 122
           A  +F   P  N  + + M++ Y   G + E V +F  M   ++RP    +  ++K    
Sbjct: 93  ARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSC 152

Query: 123 SGNL-----FHASVLKLGHIDDHFIRNAVLDMYAKYGQVDLARKLFEQMPNRTLADWNSM 182
           SG +      H S  K+G     F+ N ++ MY K G +  AR + ++M  R +  WNS+
Sbjct: 153 SGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSL 212

Query: 183 ISGCWNSGNEAD------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 242
           + G   +    D                                                
Sbjct: 213 VVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTTTENVMYVKDMFFKMGKK 272

Query: 243 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGITPDDTTWVAAISSCSSIGNPNLADSLL 302
                                          G  PD  +  + + +C      +L   + 
Sbjct: 273 SLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIH 332

Query: 303 AKINQKHVILNNYVKTALLDMHAKFGNLEIARRIFDE------------LGGFAANGHGK 362
             I +K +I N  ++ AL+DM+AK G LE AR +F+             +  +  +G G 
Sbjct: 333 GYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGC 392

Query: 363 DAIKLLLTMEEEGIEPDNVTYIGVLTACSHAGMLKEGKNIFKSIK-----APTVDHYACM 422
           DA+ L   +++ G+ PD++ ++  L ACSHAG+L+EG++ FK +       P ++H ACM
Sbjct: 393 DAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACM 452

Query: 423 VDLLGRAGELDEAKILIESMPMKPHAGVYGSLLNGSRIHKRVELGELAANKLLELEPQNP 482
           VDLLGRAG++ EA   I+ M M+P+  V+G+LL   R+H   ++G LAA+KL +L P+  
Sbjct: 453 VDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAADKLFQLAPEQS 512

Query: 483 GNYILLSNIYASAGRWEDVRQVREKMRKGGVKKSVGMSWVEYKGQIHNFTVGDRSHEWSK 542
           G Y+LLSNIYA AGRWE+V  +R  M+  G+KK+ G S VE    IH F VGDRSH  S 
Sbjct: 513 GYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGASNVEVNRIIHTFLVGDRSHPQSD 572

Query: 543 DIYRLLAELERKMKRVGFVTDKSCALRDVEEEEKEEMLGTHSEKLAICFALL-----VSE 583
           +IYR L  L +KMK +G+V D   AL DVEEE+KE  L  HSEKLAI FAL+       +
Sbjct: 573 EIYRELDVLVKKMKELGYVPDSESALHDVEEEDKETHLAVHSEKLAIVFALMNTKEEEED 632

[Close]
BLAST of Carg10573 vs. Swiss-Prot
Match: sp|Q9LIC3|PP227_ARATH (Putative pentatricopeptide repeat-containing protein At3g13770, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-H85 PE=3 SV=1)

HSP 1 Score: 292.7 bits (748), Expect = 1.2e-77
Identity = 174/544 (31.99%), Postives = 274/544 (50.37%), Query Frame = 0 

Query: 63  AASIFTSSPYPNASVYSCMLKYYSRMGAHDEVVSLFRCMQCLDLRPH----PSVYIYLIK 122
           A  +    P  N   ++ M+  YS+ G   E +++F  M   D +P+     +V    I+
Sbjct: 106 ARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIR 165

Query: 123 LAGKS-GNLFHASVLKLGHIDDHFIRNAVLDMYAKYGQVDLARKLFEQMPNRTLADWNSM 182
            +G   G   H  ++K  +    F+ +++LDMYAK GQ+  AR++FE +P R +    ++
Sbjct: 166 ASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAI 225

Query: 183 ISGCWNSGNEADXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 242
           I+G    G + +                                                
Sbjct: 226 IAGYAQLGLDEE------------------------------------------------ 285

Query: 243 XXXXXXXXXXXXXXXXXXXXXXXXXGITPDDTTWVAAISSCSSIGNPNLADSLLAKINQK 302
                                    G++P+  T+ + +++ S +   +        + ++
Sbjct: 286 --------------ALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRR 345

Query: 303 HVILNNYVKTALLDMHAKFGNLEIARRIFDE------------LGGFAANGHGKDAIKLL 362
            +     ++ +L+DM++K GNL  ARR+FD             L G++ +G G++ ++L 
Sbjct: 346 ELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELF 405

Query: 363 -LTMEEEGIEPDNVTYIGVLTACSHAGMLKEGKNIFKSIKA------PTVDHYACMVDLL 422
            L  +E+ ++PD VT + VL+ CSH  M   G NIF  + A      P  +HY C+VD+L
Sbjct: 406 RLMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDML 465

Query: 423 GRAGELDEAKILIESMPMKPHAGVYGSLLNGSRIHKRVELGELAANKLLELEPQNPGNYI 482
           GRAG +DEA   I+ MP KP AGV GSLL   R+H  V++GE    +L+E+EP+N GNY+
Sbjct: 466 GRAGRIDEAFEFIKRMPSKPTAGVLGSLLGACRVHLSVDIGESVGRRLIEIEPENAGNYV 525

Query: 483 LLSNIYASAGRWEDVRQVREKMRKGGVKKSVGMSWVEYKGQIHNFTVGDRSHEWSKDIYR 542
           +LSN+YASAGRW DV  VR  M +  V K  G SW++++  +H F   DR+H   +++  
Sbjct: 526 ILSNLYASAGRWADVNNVRAMMMQKAVTKEPGRSWIQHEQTLHYFHANDRTHPRREEVLA 585

Query: 543 LLAELERKMKRVGFVTDKSCALRDVEEEEKEEMLGTHSEKLAICFALLVSEVGTPIRVVK 583
            + E+  KMK+ G+V D SC L DV+EE+KE+ML  HSEKLA+ F L+ +  G PIRV K
Sbjct: 586 KMKEISIKMKQAGYVPDLSCVLYDVDEEQKEKMLLGHSEKLALTFGLIATGEGIPIRVFK 587

[Close]
BLAST of Carg10573 vs. Swiss-Prot
Match: sp|Q7Y211|PP285_ARATH (Pentatricopeptide repeat-containing protein At3g57430, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H81 PE=2 SV=2)

HSP 1 Score: 289.7 bits (740), Expect = 1.0e-76
Identity = 186/559 (33.27%), Postives = 283/559 (50.63%), Query Frame = 0 

Query: 77  VYSCMLKYYSRMGAHDEVVSLFRCM-QCLDLRPHPSVYIYLIKLAGKSG-----NLFHAS 136
           +++ M+  YS+     E + LF  M +   L  + +    ++    +SG        H  
Sbjct: 371 LWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGF 430

Query: 137 VLKLGHIDDHFIRNAVLDMYAKYGQVDLARKLFEQMPNRTLADWNSMISGCWNSGNEADX 196
           V+K G   D F++N ++DMY++ G++D+A ++F +M +R L  WN+MI+G   S +  D 
Sbjct: 431 VVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHED- 490

Query: 197 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 256
                                                                       
Sbjct: 491 --------------------------------------------------ALLLLHKMQN 550

Query: 257 XXXXXXXXXXXXGITPDDTTWVAAISSCSSIGNPNLADSLLAKINQKH--VILNNY---- 316
                        + P+  T +  + SC+++       S LAK  + H   I NN     
Sbjct: 551 LERKVSKGASRVSLKPNSITLMTILPSCAAL-------SALAKGKEIHAYAIKNNLATDV 610

Query: 317 -VKTALLDMHAKFGNLEIARRIFDELG------------GFAANGHGKDAIKLLLTMEEE 376
            V +AL+DM+AK G L+++R++FD++              +  +G+G++AI LL  M  +
Sbjct: 611 AVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQ 670

Query: 377 GIEPDNVTYIGVLTACSHAGMLKEGKNIFKSIK-----APTVDHYACMVDLLGRAGELDE 436
           G++P+ VT+I V  ACSH+GM+ EG  IF  +K      P+ DHYAC+VDLLGRAG + E
Sbjct: 671 GVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKE 730

Query: 437 AKILIESMPMK-PHAGVYGSLLNGSRIHKRVELGELAANKLLELEPQNPGNYILLSNIYA 496
           A  L+  MP     AG + SLL  SRIH  +E+GE+AA  L++LEP    +Y+LL+NIY+
Sbjct: 731 AYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYS 790

Query: 497 SAGRWEDVRQVREKMRKGGVKKSVGMSWVEYKGQIHNFTVGDRSHEWSKDIYRLLAELER 556
           SAG W+   +VR  M++ GV+K  G SW+E+  ++H F  GD SH  S+ +   L  L  
Sbjct: 791 SAGLWDKATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLSGYLETLWE 850

Query: 557 KMKRVGFVTDKSCALRDVEEEEKEEMLGTHSEKLAICFALLVSEVGTPIRVVKNLRILKG 605
           +M++ G+V D SC L +VEE+EKE +L  HSEKLAI F +L +  GT IRV KNLR+   
Sbjct: 851 RMRKEGYVPDTSCVLHNVEEDEKEILLCGHSEKLAIAFGILNTSPGTIIRVAKNLRVCND 863

[Close]
BLAST of Carg10573 vs. Swiss-Prot
Match: sp|Q9C6T2|PPR68_ARATH (Pentatricopeptide repeat-containing protein At1g31920 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H11 PE=2 SV=1)

HSP 1 Score: 280.4 bits (716), Expect = 6.3e-74
Identity = 165/544 (30.33%), Postives = 283/544 (52.02%), Query Frame = 0 

Query: 61  SYAASIFTSSPYPNASVYSCMLKYYSRMGAHDEVVSLFRCMQCLDLRPHPSVYIYLIKLA 120
           +YAASIF     P    ++ M++ Y  + + +E +  +  M      P    Y  L+K  
Sbjct: 83  NYAASIFRGIDDPCTFDFNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLLKAC 142

Query: 121 G-----KSGNLFHASVLKLGHIDDHFIRNAVLDMYAKYGQVDLARKLFEQMPNRTLADWN 180
                 + G   H  V KLG   D F++N++++MY + G+++L+  +FE++ ++T A W+
Sbjct: 143 TRLKSIREGKQIHGQVFKLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTAASWS 202

Query: 181 SMISGCWNSGNEADXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240
           SM+S     G  ++                                              
Sbjct: 203 SMVSARAGMGMWSE---------------------------------------------- 262

Query: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXGITPDDTTWVAAISSCSSIGNPNLADSLLAKIN 300
                                       +  +++  V+A+ +C++ G  NL  S+   + 
Sbjct: 263 ---------------CLLLFRGMCSETNLKAEESGMVSALLACANTGALNLGMSIHGFLL 322

Query: 301 QKHVILNNYVKTALLDMHAKFGNLEIARRIFDE------------LGGFAANGHGKDAIK 360
           +    LN  V+T+L+DM+ K G L+ A  IF +            + G A +G G+ A++
Sbjct: 323 RNISELNIIVQTSLVDMYVKCGCLDKALHIFQKMEKRNNLTYSAMISGLALHGEGESALR 382

Query: 361 LLLTMEEEGIEPDNVTYIGVLTACSHAGMLKEGKNIFKSI-----KAPTVDHYACMVDLL 420
           +   M +EG+EPD+V Y+ VL ACSH+G++KEG+ +F  +       PT +HY C+VDLL
Sbjct: 383 MFSKMIKEGLEPDHVVYVSVLNACSHSGLVKEGRRVFAEMLKEGKVEPTAEHYGCLVDLL 442

Query: 421 GRAGELDEAKILIESMPMKPHAGVYGSLLNGSRIHKRVELGELAANKLLELEPQNPGNYI 480
           GRAG L+EA   I+S+P++ +  ++ + L+  R+ + +ELG++AA +LL+L   NPG+Y+
Sbjct: 443 GRAGLLEEALETIQSIPIEKNDVIWRTFLSQCRVRQNIELGQIAAQELLKLSSHNPGDYL 502

Query: 481 LLSNIYASAGRWEDVRQVREKMRKGGVKKSVGMSWVEYKGQIHNFTVGDRSHEWSKDIYR 540
           L+SN+Y+    W+DV + R ++   G+K++ G S VE KG+ H F   DRSH   K+IY+
Sbjct: 503 LISNLYSQGQMWDDVARTRTEIAIKGLKQTPGFSIVELKGKTHRFVSQDRSHPKCKEIYK 562

Query: 541 LLAELERKMKRVGFVTDKSCALRDVEEEEKEEMLGTHSEKLAICFALLVSEVGTPIRVVK 583
           +L ++E ++K  G+  D +  L +V+EEEK+E L  HS+K+AI F LL +  G+ I++ +
Sbjct: 563 MLHQMEWQLKFEGYSPDLTQILLNVDEEEKKERLKGHSQKVAIAFGLLYTPPGSIIKIAR 565

[Close]
BLAST of Carg10573 vs. TrEMBL
Match: tr|A0A1S3BZ59|A0A1S3BZ59_CUCME (pentatricopeptide repeat-containing protein At1g14470 OS=Cucumis melo OX=3656 GN=LOC103495023 PE=4 SV=1)

HSP 1 Score: 719.9 bits (1857), Expect = 6.3e-204
Identity = 465/687 (67.69%), Postives = 496/687 (72.20%), Query Frame = 0 

Query: 42  HNYWVSLLLTICTRLHAHPSYAASIFTSSPYPNASVYSCMLKYYSRMGAHDEVVSLFRCM 101
           HNYWVSLLL IC RLHAHP+Y  SIFTSSP P+ASVYSCMLKYYSRMGAH++VVSLF+CM
Sbjct: 32  HNYWVSLLLVICNRLHAHPAYVDSIFTSSPSPDASVYSCMLKYYSRMGAHNQVVSLFKCM 91

Query: 102 QCLDLRPHPSVYIYLIKLAGKSGNLFHASVLKLGHIDDHFIRNAVLDMYAKYGQVDLARK 161
             LDLRP P VYIYLIK AGKSGNLFHA VLKLGHIDD FIRNA+LDMY K GQVDLARK
Sbjct: 92  HSLDLRPQPFVYIYLIKSAGKSGNLFHAYVLKLGHIDDRFIRNAILDMYVKNGQVDLARK 151

Query: 162 LFEQMPNRTLADWNSMISGCWNSGNEADXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 221
           LFEQM  +TL DWNSMISGC        XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 152 LFEQMAEKTLVDWNSMISGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 211

Query: 222 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGITPDDTTWVAAISSCSSI 281
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX ITPDDTTW   ISSCSSI
Sbjct: 212 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXITPDDTTWAVTISSCSSI 271

Query: 282 GNPNLADSLLAKINQKHVILNNYVKTALLDMHAKFGNLEIARRIFDELG----------- 341
           G+P LADS+L  INQKH++LN++V+TALLDMHAKFGNLEIAR IFDELG           
Sbjct: 272 GDPTLADSILRMINQKHIVLNSFVQTALLDMHAKFGNLEIARNIFDELGSQRNDVAWNVM 331

Query: 342 ------------------------------------------------------------ 401
                                                                       
Sbjct: 332 ISAYTRXXXXXXXXXXXXNMPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXISCADIQPD 391

Query: 402 ------------------------------------------------------------ 461
                                                                       
Sbjct: 392 EVTIASVLSACGHIGALKLGYWVLDIVREKNIKLGISGFNSLIFMYSKCGSVADAHRIFQ 451

Query: 462 ---------------GFAANGHGKDAIKLLLTMEEEGIEPDNVTYIGVLTACSHAGMLKE 521
                          GFAANGHGK+AIKL+LTMEEEGIEPD+VTYIGVLTACSHAG+L E
Sbjct: 452 TMETRDVVSFNTLISGFAANGHGKEAIKLVLTMEEEGIEPDHVTYIGVLTACSHAGLLNE 511

Query: 522 GKNIFKSIKAPTVDHYACMVDLLGRAGELDEAKILIESMPMKPHAGVYGSLLNGSRIHKR 581
           GKN+FKSIKAPTVDHYACMVDLLGRAGELDEAK+LI+SMPMKPH GVYGSLLN SRIHKR
Sbjct: 512 GKNVFKSIKAPTVDHYACMVDLLGRAGELDEAKMLIQSMPMKPHGGVYGSLLNASRIHKR 571

Query: 582 VELGELAANKLLELEPQNPGNYILLSNIYASAGRWEDVRQVREKMRKGGVKKSVGMSWVE 583
           V LGELAA+KL ELEPQNPGNY+LLSNIYAS+GRWEDV++VRE MRK G++K VGMSWVE
Sbjct: 572 VGLGELAASKLFELEPQNPGNYVLLSNIYASSGRWEDVKRVREMMRKRGLQKLVGMSWVE 631

[Close]
BLAST of Carg10573 vs. TrEMBL
Match: tr|A0A2N9HBU0|A0A2N9HBU0_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS39719 PE=4 SV=1)

HSP 1 Score: 538.1 bits (1385), Expect = 3.4e-149
Identity = 386/694 (55.62%), Postives = 447/694 (64.41%), Query Frame = 0 

Query: 35  VPRSDFYHNYWVSLLLTICTRLHAHPSYAASIFTSSPYPNASVYSCMLKYYSRMGAHDEV 94
           +  S  +HNYWV+LLLT CTRLHA  +Y   IF S   P+  V++ ML+YYS++GAH EV
Sbjct: 25  IQNSLHHHNYWVALLLTHCTRLHAPSAYTRLIFNSVSCPDGYVFTSMLRYYSQLGAHSEV 84

Query: 95  VSLFRCMQCLDLRPHPSVYIYLIKLAGKSGNLFHASVLKLGHIDDHFIRNAVLDMYAKYG 154
           VSLF+ MQC  +RP   VY  LIKLAGK+  +FHA ++KLGH  D ++RNA++D+YAKYG
Sbjct: 85  VSLFKQMQCCGIRPGTFVYPVLIKLAGKACIVFHAHLVKLGHGQDRYVRNAIMDVYAKYG 144

Query: 155 QVDLARKLFEQMPNRTLADWNSMISGCWNSGNEADXXXXXXXXXXXXXXXXXXXXXXXXX 214
            + +AR+LFE+M  RT+ADW               XXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 145 PIKVARELFEEMHERTVADWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 204

Query: 215 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGITPDDTTWVAA 274
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXG+ P++TTWV  
Sbjct: 205 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVQPNETTWVIV 264

Query: 275 ISSCSSIGNPNLADSLLAKINQKHVILNNYVKTALLDMHAKFGNLEI------------- 334
           ISS S  G+  LADSL+  +++K + LN +VKTALLDM+AK GNLE              
Sbjct: 265 ISSLSLHGDTCLADSLVRTLDRKKIHLNCFVKTALLDMYAKCGNLETAXXXXXXXXXXXX 324

Query: 335 ------------------------------------------------------------ 394
                                                                       
Sbjct: 325 XXXXXXXXXXXXXXXXXXXXXXXXXXMPEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTA 384

Query: 395 ------------------------------------------------------------ 454
                                                                       
Sbjct: 385 IKGLKPDEVTMVSVFSACGHLGALKLGNWVVNILNENHINLSISGYNSLIFMYSRCGSVE 444

Query: 455 -ARRIFDE------------LGGFAANGHGKDAIKLLLTMEEEGIEPDNVTYIGVLTACS 514
            A+R+F E            + GFAA+GHG +AI+L+  M+EEGIEPD VT+IGVLTACS
Sbjct: 445 DAKRVFQEMATRDVVSYNTLIAGFAAHGHGMEAIELMSKMKEEGIEPDRVTFIGVLTACS 504

Query: 515 HAGMLKEGKNIFKSIKAPTVDHYACMVDLLGRAGELDEAKILIESMPMKPHAGVYGSLLN 574
           HAG+L+EG  ++KSI+AP VDHYACMVDLLGR GEL+EAK LIESMPM+ HAGVYGSLLN
Sbjct: 505 HAGLLEEGWKVYKSIQAPAVDHYACMVDLLGRVGELEEAKKLIESMPMEAHAGVYGSLLN 564

Query: 575 GSRIHKRVELGELAANKLLELEPQNPGNYILLSNIYASAGRWEDVRQVREKMRKGGVKKS 583
            SRIHKRVE GELAANKL ELEP N GNYILLSNIYASAGRWEDV +VR  MRK GVKK+
Sbjct: 565 ASRIHKRVEFGELAANKLFELEPYNSGNYILLSNIYASAGRWEDVERVRGTMRKVGVKKT 624

[Close]
BLAST of Carg10573 vs. TrEMBL
Match: tr|A5B4C7|A5B4C7_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_013866 PE=4 SV=1)

HSP 1 Score: 529.3 bits (1362), Expect = 1.6e-146
Identity = 362/690 (52.46%), Postives = 433/690 (62.75%), Query Frame = 0 

Query: 41  YHNYWVSLLLTICTRLHAHPSYAASIFTSSPYPNASVYSCMLKYYSRMGAHDEVVSLFRC 100
           +HNYWV+LL+  CTRL A P Y   +F S+  PN  V++ ML++YS +  H +VV +F  
Sbjct: 31  HHNYWVALLINHCTRLRAPPHYTHLLFNSTLNPNVFVFTSMLRFYSHLQDHAKVVLMFEH 90

Query: 101 MQCLDLRPHPSVYIYLIKLAGKSGNLFHASVLKLGHIDDHFIRNAVLDMYAKYGQVDLAR 160
           MQ   +RP   VY  LIK AG  G  FHA VLKLGH  D F+RNAV+DMYA+ G +  AR
Sbjct: 91  MQGCGVRPDAFVYPILIKSAGNGGIGFHAHVLKLGHGSDAFVRNAVIDMYARLGPIGHAR 150

Query: 161 KLFEQMPN--RTLADWNSMISGCWNSGNEADXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 220
           K+F+++P+  R +ADWN+M+SG W   +E           XXXXXXXXXXXXXXXXXXXX
Sbjct: 151 KVFDEIPDYERKVADWNAMVSGYWKWESEGQAQWLFDVMPXXXXXXXXXXXXXXXXXXXX 210

Query: 221 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGITPDDTTWVAAISSC 280
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  GI PD+TTWV  IS+C
Sbjct: 211 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNAGIEPDETTWVTVISAC 270

Query: 281 SSIGNPNLADSLLAKINQKHVILNNYVKTALLDMHAKFGNLEIARRIFDELG-------- 340
           SS G+P LA SL+  ++QK + LN +V+TALLDM+AK G++  ARRIFDELG        
Sbjct: 271 SSRGDPCLAASLVRTLHQKQIQLNCFVRTALLDMYAKCGSIGAARRIFDELGAYRNSVTW 330

Query: 341 ------------------------------------------------------------ 400
                                                                       
Sbjct: 331 NAMISAYTRVGNLDSAXELFNTMPGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTAKKL 390

Query: 401 ------------------------------------------------------------ 460
                                                                       
Sbjct: 391 TPDEVTMVSVISACGHLGALELGNWVVRFLTENQIKLSISGHNAMIFMYSRCGSMEDAKR 450

Query: 461 ------------------GFAANGHGKDAIKLLLTMEEEGIEPDNVTYIGVLTACSHAGM 520
                             GFAA+GHG +AI L+ TM+E GIEPD VT+IGVLTACSHAG+
Sbjct: 451 VFQEMATRDVVSYNTLISGFAAHGHGVEAINLMSTMKEGGIEPDRVTFIGVLTACSHAGL 510

Query: 521 LKEGKNIFKSIKAPTVDHYACMVDLLGRAGELDEAKILIESMPMKPHAGVYGSLLNGSRI 580
           L+EG+ +F+SIK P +DHYACMVDLLGR GEL++AK  +E MPM+PHAGVYGSLLN SRI
Sbjct: 511 LEEGRKVFESIKDPAIDHYACMVDLLGRVGELEDAKRTMERMPMEPHAGVYGSLLNASRI 570

Query: 581 HKRVELGELAANKLLELEPQNPGNYILLSNIYASAGRWEDVRQVREKMRKGGVKKSVGMS 583
           HK+VELGELAANKL ELEP N GN+ILLSNIYASAGRW+DV ++RE M+KGGVKK+ G S
Sbjct: 571 HKQVELGELAANKLFELEPDNSGNFILLSNIYASAGRWKDVERIREAMKKGGVKKTTGWS 630

[Close]
BLAST of Carg10573 vs. TrEMBL
Match: tr|A0A067KKU3|A0A067KKU3_JATCU (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_13364 PE=4 SV=1)

HSP 1 Score: 512.7 bits (1319), Expect = 1.5e-141
Identity = 363/695 (52.23%), Postives = 434/695 (62.45%), Query Frame = 0 

Query: 35  VPRSDFYHNYWVSLLLTICTRLHAHPSYAASIFTSSPYPNASVYSCMLKYYSRMGAHDEV 94
           +  S  +HN W SLL+  CT LHA P Y  SIF S+P P   V + MLKYYS +G  +EV
Sbjct: 25  IQNSLHHHNNWASLLIAQCTLLHAPPHYTRSIFNSTPDPTIHVVTSMLKYYSHLGGQNEV 84

Query: 95  VSLFRCMQCLD-LRPHPSVYIYLIKLAGKSGNLFHASVLKLGHIDDHFIRNAVLDMYAKY 154
           +S F+ MQC   ++    VY  +IK AGK G +FH  + KLG+++D +IRN +LDMYAK 
Sbjct: 85  ISFFKHMQCCSYVKLGAYVYPLVIKSAGKDGIMFHGHIWKLGYVNDPYIRNVILDMYAKR 144

Query: 155 GQVDLARKLFEQMPNRTLADWNSMISGCWNSGNEADXXXXXXXXXXXXXXXXXXXXXXXX 214
           G V++ARKLF++M  R+LADWNS             XXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 145 GPVEVARKLFDEMTERSLADWNSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 204

Query: 215 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGITPDDTTWVA 274
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   G+ P++TTW  
Sbjct: 205 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVNSGVQPNETTWAT 264

Query: 275 AISSCSSIGNPNLADSLLAKINQKHVILNNYVKTALLDMHAKFGNLEIARRIFDELG--- 334
            +S CS  G+P +A+S++  ++ K + +N +VKTALLDM+AK GNLE AR IF+ELG   
Sbjct: 265 VVSLCSLFGDPCVAESIVKMLDGKRIKMNCFVKTALLDMNAKCGNLEAARNIFNELGVHR 324

Query: 335 ------------------------------------------------------------ 394
                                                                       
Sbjct: 325 NSVTWNTMISAYTKVGDLDSARDHFDRMPEXXXXXXXXXXXXXXXXXXXXXXXXXXXXMI 384

Query: 395 ------------------------------------------------------------ 454
                                                                       
Sbjct: 385 SSKDLQPDEVTMASVISACGHLGALELGTWVVNHITEYKINLSILGYNSLIFMYSKCGNM 444

Query: 455 -----------------------GFAANGHGKDAIKLLLTMEEEGIEPDNVTYIGVLTAC 514
                                  GFAA+G G +AIKLL TM+EEGI PD VTYIGVLTAC
Sbjct: 445 KEAHRIFQEMETRDVVSYNTLIAGFAAHGKGIEAIKLLSTMKEEGIHPDRVTYIGVLTAC 504

Query: 515 SHAGMLKEGKNIFKSIKAPTVDHYACMVDLLGRAGELDEAKILIESMPMKPHAGVYGSLL 574
           SHAG+++EG  +F+SI++P VDHYACMVDLLGR G+LDEAK LI++MPM+PHAGVYGSLL
Sbjct: 505 SHAGLMEEGHKVFESIESPDVDHYACMVDLLGRVGKLDEAKKLIDNMPMEPHAGVYGSLL 564

Query: 575 NGSRIHKRVELGELAANKLLELEPQNPGNYILLSNIYASAGRWEDVRQVREKMRKGGVKK 583
           + S+IHKRV+ GELAA  L +LEPQN GNY+LLSNIYASAGRWE+V +VRE M KG VKK
Sbjct: 565 HASQIHKRVDFGELAAKMLFQLEPQNSGNYVLLSNIYASAGRWEEVNRVREMMSKGEVKK 624

[Close]
BLAST of Carg10573 vs. TrEMBL
Match: tr|A0A2I4EEL9|A0A2I4EEL9_9ROSI (pentatricopeptide repeat-containing protein At1g14470-like OS=Juglans regia OX=51240 GN=LOC108988911 PE=4 SV=1)

HSP 1 Score: 506.5 bits (1303), Expect = 1.1e-139
Identity = 368/688 (53.49%), Postives = 432/688 (62.79%), Query Frame = 0 

Query: 41  YHNYWVSLLLTICTRLHAHPSYAASIFTSSPYPNASVYSCMLKYYSRMGAHDEVVSLFRC 100
           +HNYWV+LLL  CTR+ A  +Y   IFTS P+P+  V++ ML+YYS  G H+EV SLFR 
Sbjct: 33  HHNYWVALLLNHCTRIDAPLTYTRLIFTSVPFPDGRVFTSMLRYYSHQGTHNEVFSLFRH 92

Query: 101 MQCLDLRPHPSVYIYLIKLAGKSGNLFHASVLKLGHIDDHFIRNAVLDMYAKYGQVDLAR 160
           MQ   +RP   VY  LIKLAGK+G +F A +LKLG   D + RNA+++ Y KYG V++AR
Sbjct: 93  MQRSGIRPGIFVYPMLIKLAGKAGFVFRAHLLKLGLTLDRYARNAIMETYVKYGAVEVAR 152

Query: 161 KLFEQMPNRTLADWNSMISGCWNSGNEADXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 220
           +LF+++P +TLADW               XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 153 ELFDEIPEKTLADWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 212

Query: 221 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGITPDDTTWVAAISSCSS 280
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX G+  + TTWV  IS  S 
Sbjct: 213 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGVQLNATTWVIVISLLSL 272

Query: 281 IGNPNLADSLLAKINQKHVILNNYVKTALLDMHAKFGNLEIARRIFDEL----------- 340
            G+P+ ADSL+ K++QK + LN +V+TALLDMHAK G+LE AR+IFD L           
Sbjct: 273 RGDPSHADSLVRKLDQKKMQLNCFVQTALLDMHAKCGSLETARKIFDGLDTYRNSVXXXX 332

Query: 341 ------------------------------------------------------------ 400
                                                                       
Sbjct: 333 XXXXXXXXXXXXXXXXXXXXMPEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXITSKDSKP 392

Query: 401 ------------------------------------------------------------ 460
                                                                       
Sbjct: 393 DEVTMVSVFSACGHLGALKLGNWVVNILDENHINLSISGYNSLIFMYSRCGSMEDAKRIF 452

Query: 461 ---------------GGFAANGHGKDAIKLLLTMEEEGIEPDNVTYIGVLTACSHAGMLK 520
                           G AA+GHG +AI+L+  M++EG EPD VTYIG+L ACSHAG++K
Sbjct: 453 HKMVTRDVVSYNTLIAGLAAHGHGMEAIELISKMKQEGTEPDRVTYIGLLMACSHAGLMK 512

Query: 521 EGKNIFKSIKAPTVDHYACMVDLLGRAGELDEAKILIESMPMKPHAGVYGSLLNGSRIHK 580
           EG  +F+ I++P VDHYACMVDLLGR GELDEAK LIE+MPM+PHAGVYGSLLN SRIHK
Sbjct: 513 EGWKLFRLIQSPAVDHYACMVDLLGRLGELDEAKKLIENMPMEPHAGVYGSLLNASRIHK 572

Query: 581 RVELGELAANKLLELEPQNPGNYILLSNIYASAGRWEDVRQVREKMRKGGVKKSVGMSWV 583
           RV+LGELAA KL ELEP N GNYILLSNIYASAGRWEDV +VR  MRK GV+K+ G SWV
Sbjct: 573 RVKLGELAAKKLFELEPYNSGNYILLSNIYASAGRWEDVERVRGTMRKVGVRKTTGWSWV 632

The following BLAST results are available for this feature:
BLAST of Carg10573 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022941407.11.5e-24478.28pentatricopeptide repeat-containing protein At1g14470 [Cucurbita moschata][more]
XP_023523920.14.2e-24477.99pentatricopeptide repeat-containing protein At1g14470 [Cucurbita pepo subsp. pep... [more]
XP_022982206.11.4e-23976.97pentatricopeptide repeat-containing protein At1g14470 [Cucurbita maxima][more]
XP_022133377.12.3e-21069.29pentatricopeptide repeat-containing protein At1g14470-like isoform X1 [Momordica... [more]
XP_004147828.13.3e-20468.12PREDICTED: pentatricopeptide repeat-containing protein At1g14470 [Cucumis sativu... [more]
BLAST of Carg10573 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G47640.13.6e-9684.73unknown protein[more]
AT2G01510.12.3e-8233.46Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT3G49142.15.2e-7932.73Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT3G13770.16.8e-7931.99Pentatricopeptide repeat (PPR) superfamily protein[more]
AT3G57430.15.8e-7833.27Tetratricopeptide repeat (TPR)-like superfamily protein[more]
BLAST of Carg10573 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9ZVF4|PP140_ARATH4.1e-8133.46Pentatricopeptide repeat-containing protein At2g01510, mitochondrial OS=Arabidop... [more]
sp|P0C899|PP271_ARATH9.4e-7832.73Putative pentatricopeptide repeat-containing protein At3g49142 OS=Arabidopsis th... [more]
sp|Q9LIC3|PP227_ARATH1.2e-7731.99Putative pentatricopeptide repeat-containing protein At3g13770, mitochondrial OS... [more]
sp|Q7Y211|PP285_ARATH1.0e-7633.27Pentatricopeptide repeat-containing protein At3g57430, chloroplastic OS=Arabidop... [more]
sp|Q9C6T2|PPR68_ARATH6.3e-7430.33Pentatricopeptide repeat-containing protein At1g31920 OS=Arabidopsis thaliana OX... [more]
BLAST of Carg10573 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3BZ59|A0A1S3BZ59_CUCME6.3e-20467.69pentatricopeptide repeat-containing protein At1g14470 OS=Cucumis melo OX=3656 GN... [more]
tr|A0A2N9HBU0|A0A2N9HBU0_FAGSY3.4e-14955.62Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS39719 PE=4 SV=1[more]
tr|A5B4C7|A5B4C7_VITVI1.6e-14652.46Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_013866 PE=4 SV=1[more]
tr|A0A067KKU3|A0A067KKU3_JATCU1.5e-14152.23Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_13364 PE=4 SV=1[more]
tr|A0A2I4EEL9|A0A2I4EEL9_9ROSI1.1e-13953.49pentatricopeptide repeat-containing protein At1g14470-like OS=Juglans regia OX=5... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR032867DYW_dom
IPR019164TMEM147
IPR011990TPR-like_helical_dom_sf
IPR002885Pentatricopeptide_repeat
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0005515 protein binding
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg10573-RACarg10573-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 231..278
e-value: 1.1E-11
score: 44.7
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 203..230
e-value: 1.8E-5
score: 22.6
coord: 234..267
e-value: 1.6E-9
score: 35.3
coord: 144..167
e-value: 0.0011
score: 16.9
IPR002885Pentatricopeptide repeatPFAMPF13812PPR_3coord: 344..398
e-value: 5.5E-4
score: 19.9
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 77..103
e-value: 0.0075
score: 16.4
coord: 174..201
e-value: 4.7E-4
score: 20.1
coord: 460..485
e-value: 0.63
score: 10.3
coord: 144..168
e-value: 0.0045
score: 17.0
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 232..266
score: 12.912
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 356..386
score: 7.103
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 174..200
score: 5.799
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 267..301
score: 6.884
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 139..173
score: 9.01
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 453..487
score: 8.977
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 302..332
score: 6.16
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 201..231
score: 10.128
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 74..108
score: 9.92
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 387..417
score: 7.388
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3DG3DSA:1.25.40.10coord: 232..301
e-value: 2.7E-9
score: 38.8
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3DG3DSA:1.25.40.10coord: 308..515
e-value: 3.0E-28
score: 101.0
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3DG3DSA:1.25.40.10coord: 37..133
e-value: 2.3E-9
score: 38.8
coord: 134..231
e-value: 1.9E-22
score: 81.4
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILYSSF48452TPR-likecoord: 186..274
coord: 309..479
IPR019164Transmembrane protein 147PFAMPF09767DUF2053coord: 608..746
e-value: 1.2E-43
score: 148.9
IPR032867DYW domainPFAMPF14432DYW_deaminasecoord: 490..582
e-value: 2.0E-20
score: 72.8
NoneNo IPR availablePANTHERPTHR24015:SF911SUBFAMILY NOT NAMEDcoord: 330..536
coord: 64..298
NoneNo IPR availablePANTHERPTHR24015FAMILY NOT NAMEDcoord: 330..536
coord: 64..298