CmoCh09G001730 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh09G001730
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionCalmodulin
LocationCmo_Chr09 : 778153 .. 778704 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCCTTTCACCCATTTCCACTCCCTTCAAATGGTTTTCCAACACCAATCTCAAGCTCAACCTCCCTCGCCTTCGCTTCAAACATAAGCCCACCCGGTCTAACCCTCCTCCTCCACCACTACTCCTCACGCCTGCGCCCCCGCTCGCCGAAGCTGCCTTCCGCCACCTCGATGCCGATGGAGATGGCAAAATCTCAGGGGACGAGCTCCAATCCTACTTTGCATCAGTCGGTGAGTACATGACACGGGACGATGCTCGAAGTCTAATAAGAGAGTTCGACGGGGATGGTGATTTGTTACTGGAGCTCGGAGACTTCGAACGGCTGGTGAAGGGTGGGGAGCAGGAAGAGAAAGAGGATCTGAAAAGGGCTTTTGAGATGTTTGAAGGTGAAAAGGGATGCGGATTCATCGGACCGGCAGGGCTGCAAAAGATGTTTGGACGGCTTGGATACGTGAAATCCATAGAAGAGTGCATGGCTATGATCGGAGTGTTTGATGTTGACGGCAACGGTGTAATTGATTATCGTGAATTTCTCAGAATGATGACTTAA

mRNA sequence

ATGGCCCTTTCACCCATTTCCACTCCCTTCAAATGGTTTTCCAACACCAATCTCAAGCTCAACCTCCCTCGCCTTCGCTTCAAACATAAGCCCACCCGGTCTAACCCTCCTCCTCCACCACTACTCCTCACGCCTGCGCCCCCGCTCGCCGAAGCTGCCTTCCGCCACCTCGATGCCGATGGAGATGGCAAAATCTCAGGGGACGAGCTCCAATCCTACTTTGCATCAGTCGGTGAGTACATGACACGGGACGATGCTCGAAGTCTAATAAGAGAGTTCGACGGGGATGGTGATTTGTTACTGGAGCTCGGAGACTTCGAACGGCTGGTGAAGGGTGGGGAGCAGGAAGAGAAAGAGGATCTGAAAAGGGCTTTTGAGATGTTTGAAGGTGAAAAGGGATGCGGATTCATCGGACCGGCAGGGCTGCAAAAGATGTTTGGACGGCTTGGATACGTGAAATCCATAGAAGAGTGCATGGCTATGATCGGAGTGTTTGATGTTGACGGCAACGGTGTAATTGATTATCGTGAATTTCTCAGAATGATGACTTAA

Coding sequence (CDS)

ATGGCCCTTTCACCCATTTCCACTCCCTTCAAATGGTTTTCCAACACCAATCTCAAGCTCAACCTCCCTCGCCTTCGCTTCAAACATAAGCCCACCCGGTCTAACCCTCCTCCTCCACCACTACTCCTCACGCCTGCGCCCCCGCTCGCCGAAGCTGCCTTCCGCCACCTCGATGCCGATGGAGATGGCAAAATCTCAGGGGACGAGCTCCAATCCTACTTTGCATCAGTCGGTGAGTACATGACACGGGACGATGCTCGAAGTCTAATAAGAGAGTTCGACGGGGATGGTGATTTGTTACTGGAGCTCGGAGACTTCGAACGGCTGGTGAAGGGTGGGGAGCAGGAAGAGAAAGAGGATCTGAAAAGGGCTTTTGAGATGTTTGAAGGTGAAAAGGGATGCGGATTCATCGGACCGGCAGGGCTGCAAAAGATGTTTGGACGGCTTGGATACGTGAAATCCATAGAAGAGTGCATGGCTATGATCGGAGTGTTTGATGTTGACGGCAACGGTGTAATTGATTATCGTGAATTTCTCAGAATGATGACTTAA
Homology
[Close]
BLAST of CmoCh09G001730 vs. Swiss-Prot
Match: CML41_ARATH (Probable calcium-binding protein CML41 OS=Arabidopsis thaliana GN=CML41 PE=2 SV=2)

HSP 1 Score: 135.2 bits (339), Expect = 7.3e-31
Identity = 85/197 (43.15%), Postives = 106/197 (53.81%), Query Frame = 1 

Query: 5   PISTPFKWFSNTNLKLNLPRLRFKHKPT----------RSNPPPPPLLLTPAPPLAEA-- 64
           P S  FKWFS   LKLNL     +  P           RSN      + +      E   
Sbjct: 8   PSSNSFKWFSTKTLKLNLSFQNRRRSPKSNSSSTLNSPRSNSDDNNNIKSHQASKEELRQ 67

Query: 65  AFRHLDADGDGKISGDELQSYFASVGEYMTRDDARSLIREFDGDGDLLLELGDFERLVK- 124
            F H D+DGDGKIS  EL+ YF SVGEY++ + A+  I E D D D  L   DF  L+  
Sbjct: 68  VFSHFDSDGDGKISAFELRHYFGSVGEYISHEAAQEAINEVDTDADGSLGFEDFVGLMTR 127

Query: 125 -----GGEQEEKEDLKRAFEMFEGEKGCGFIGPAGLQKMFGRLGYVKSIEECMAMIGVFD 184
                 GE +   +LK AFEMFE EKG G I P GLQKM  +LG  ++  EC AMI  +D
Sbjct: 128 RDLYGDGEVDGDGELKTAFEMFEVEKGSGCITPKGLQKMLVKLGESRTYGECEAMIKFYD 187

[Close]
BLAST of CmoCh09G001730 vs. Swiss-Prot
Match: CML38_ARATH (Calcium-binding protein CML38 OS=Arabidopsis thaliana GN=CML38 PE=2 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 1.3e-19
Identity = 51/133 (38.35%), Postives = 86/133 (64.66%), Query Frame = 1 

Query: 51  EAAFRHLDADGDGKISGDELQSYFASVGEYMTRDDARSLIREFDGDGDLLLELGDFERLV 110
           EA F ++DA+ DG+IS +ELQ  F ++GE ++ ++A + +R  D DGD +L+  +F +L+
Sbjct: 45  EAVFSYMDANRDGRISPEELQKSFMTLGEQLSDEEAVAAVRLSDTDGDGMLDFEEFSQLI 104

Query: 111 KGGEQEEKE-DLKRAFEMFEGEKGCGFIGPAGLQKMFGRLGYVKSIEECMAMIGVFDVDG 170
           K  ++EEK+ +LK AF ++  E G   I P  L+ M  +LG  ++ ++C  MI  FD++ 
Sbjct: 105 KVDDEEEKKMELKGAFRLYIAE-GEDCITPRSLKMMLKKLGESRTTDDCRVMISAFDLNA 164

Query: 171 NGVIDYREFLRMM 183
           +GV+ + EF  MM
Sbjct: 165 DGVLSFDEFALMM 176

[Close]
BLAST of CmoCh09G001730 vs. Swiss-Prot
Match: CML39_ARATH (Calcium-binding protein CML39 OS=Arabidopsis thaliana GN=CML39 PE=2 SV=1)

HSP 1 Score: 95.1 bits (235), Expect = 8.3e-19
Identity = 49/136 (36.03%), Postives = 84/136 (61.76%), Query Frame = 1 

Query: 51  EAAFRHLDADGDGKISGDELQSYFASVGEYMTRDDARSLIREFDGDGDLLLELGDFERLV 110
           EA F ++DA+ DG+IS +EL+  F ++GE M+ ++A + ++  D DGD +L++ +F  L+
Sbjct: 24  EAVFAYMDANRDGRISAEELKKSFKTLGEQMSDEEAEAAVKLSDIDGDGMLDINEFALLI 83

Query: 111 KGG----EQEEKEDLKRAFEMFEGEKGCGFIGPAGLQKMFGRLGYVKSIEECMAMIGVFD 170
           KG     E+E+K  +  AF M+  + G   I P  L+ M  +LG  ++ ++C  MI  FD
Sbjct: 84  KGNDEFTEEEKKRKIMEAFRMYIAD-GEDCITPGSLKMMLMKLGESRTTDDCKVMIQAFD 143

Query: 171 VDGNGVIDYREFLRMM 183
           ++ +GV+ + EF  MM
Sbjct: 144 LNADGVLSFDEFALMM 158

[Close]
BLAST of CmoCh09G001730 vs. Swiss-Prot
Match: CML15_ORYSJ (Probable calcium-binding protein CML15 OS=Oryza sativa subsp. japonica GN=CML15 PE=2 SV=1)

HSP 1 Score: 93.6 bits (231), Expect = 2.4e-18
Identity = 55/145 (37.93%), Postives = 82/145 (56.55%), Query Frame = 1 

Query: 45  PAPPLAE----AAFRHLDADGDGKISGDELQSYFASVGEYMTRDDARSLIREFDGDGDLL 104
           P PP AE      FR  DA+GDG+IS  EL + F SVG  +T D+   +++E D DGD  
Sbjct: 47  PRPPAAEDETERVFRKFDANGDGRISRAELAALFRSVGHAVTDDEVARMMQEADSDGDGY 106

Query: 105 LELGDFERL---VKGGEQEEKEDLKRAFEMFEGEKGCGFIGPAGLQKMFGRLGYVKSIEE 164
           + LG+F  +     G     +EDL+ AF +F+ + G G I PA L ++   +G   ++ +
Sbjct: 107 ISLGEFAAISAPPPGDAAAAEEDLRHAFGVFDAD-GNGVITPAELARVLRGIGEAATVAQ 166

Query: 165 CMAMIGVFDVDGNGVIDYREFLRMM 183
           C  MI   D +G+G+I++ EF  MM
Sbjct: 167 CRRMIDGVDRNGDGLINFEEFKLMM 190

[Close]
BLAST of CmoCh09G001730 vs. Swiss-Prot
Match: CML31_ORYSJ (Probable calcium-binding protein CML31 OS=Oryza sativa subsp. japonica GN=CML31 PE=2 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 3.2e-18
Identity = 58/143 (40.56%), Postives = 86/143 (60.14%), Query Frame = 1 

Query: 46  APPLAEAAFRHLDADGDGKISGDELQSYF-ASVGEYMTRDDARSLIREFDGDGDLLLELG 105
           +P  + A F   D DGDG+IS  EL+     ++GE ++ ++A  L+   D DGD LL   
Sbjct: 8   SPCESSALFATFDHDGDGRISAAELRLCMKTTLGEEVSDEEAGQLVASVDADGDGLLCEA 67

Query: 106 DFERLVKGGEQEEKED-----LKRAFEMFEGEKGCGFIGPAGLQKMFGRLGYVKSIEECM 165
           +F RLV+  E EE+++     L+ AF M+E E G G I P  L++M  RLG  + I++C 
Sbjct: 68  EFVRLVQAAEVEEEDERRGTGLREAFGMYEME-GEGCITPTSLRRMLRRLGSDQDIDDCR 127

Query: 166 AMIGVFDVDGNGVIDYREFLRMM 183
           AMI  FD++G+GV+ + EF  MM
Sbjct: 128 AMICRFDLNGDGVLSFDEFKIMM 149

[Close]
BLAST of CmoCh09G001730 vs. TrEMBL
Match: A0A0A0LG17_CUCSA (Calmodulin OS=Cucumis sativus GN=Csa_3G854250 PE=4 SV=1)

HSP 1 Score: 259.2 bits (661), Expect = 3.7e-66
Identity = 138/185 (74.59%), Postives = 150/185 (81.08%), Query Frame = 1 

Query: 1   MALSPIST-PFKWFSNTNLKLNLPRLRFKHKPTRSNPPPPPLLLTPAP-PLAEAAFRHLD 60
           MA+S I+  PFKWF+ TN KLN P L  KHKPT S P        P P PLAE AFRHLD
Sbjct: 1   MAISSIAVIPFKWFTKTNFKLNFPLLHSKHKPTSSKPSTSG----PGPRPLAEVAFRHLD 60

Query: 61  ADGDGKISGDELQSYFASVGEYMTRDDARSLIREFDGDGDLLLELGDFERLVKGGEQEEK 120
            DGDGKIS +ELQSYFAS+GEYMT +DARS+I +FD DGD LLELGDFER+VKG E+EE+
Sbjct: 61  VDGDGKISCNELQSYFASIGEYMTWNDARSVIGDFDRDGDELLELGDFERMVKG-EEEEE 120

Query: 121 EDLKRAFEMFEGEKGCGFIGPAGLQKMFGRLGYVKSIEECMAMIGVFDVDGNGVIDYREF 180
           EDLKRAFEMFEGEKGCGFI   GLQKMFGRLGYVKS EECMAMI VFDVDG+GVIDY EF
Sbjct: 121 EDLKRAFEMFEGEKGCGFIEATGLQKMFGRLGYVKSKEECMAMIKVFDVDGDGVIDYHEF 180

Query: 181 LRMMT 184
           LRMMT
Sbjct: 181 LRMMT 180

[Close]
BLAST of CmoCh09G001730 vs. TrEMBL
Match: A0A061FDC7_THECC (Calmodulin-like 41, putative OS=Theobroma cacao GN=TCM_033977 PE=4 SV=1)

HSP 1 Score: 195.3 bits (495), Expect = 6.6e-47
Identity = 98/188 (52.13%), Postives = 136/188 (72.34%), Query Frame = 1 

Query: 1   MALSPISTPFKWFSNTNLKLNLPRLRFKHKPTRSNPPPPPLLLTPAPPLA------EAAF 60
           M ++ IS P KWFSN +L+L+ PRLR K K + S+ P P ++  P P ++      +  F
Sbjct: 1   MEIASISKPIKWFSNKSLRLSFPRLRSKSK-SSSSLPSPTVIRPPTPNISTKEEDLQVVF 60

Query: 61  RHLDADGDGKISGDELQSYFASVGEYMTRDDARSLIREFDGDGDLLLELGDFERLVKGGE 120
           R  D+DGDGKIS +EL +YFAS+G+Y++R +A+ +I++FD +GD  LE  DF +L++GG 
Sbjct: 61  RRFDSDGDGKISSEELSAYFASIGDYVSRQEAQRVIKDFDNNGDNRLEFNDFVKLMEGG- 120

Query: 121 QEEKEDLKRAFEMFEGEKGCGFIGPAGLQKMFGRLGYVKSIEECMAMIGVFDVDGNGVID 180
            E  +D+KRAFEM+E +KGCG I P GLQ+M  RLG VKS EEC+AMI VFD+DGNGV+D
Sbjct: 121 NEGDDDIKRAFEMYEVDKGCGCITPVGLQQMLNRLGDVKSYEECVAMIRVFDLDGNGVLD 180

Query: 181 YREFLRMM 183
           + EF +MM
Sbjct: 181 FHEFQQMM 186

[Close]
BLAST of CmoCh09G001730 vs. TrEMBL
Match: A0A0D2R0D0_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_010G012800 PE=4 SV=1)

HSP 1 Score: 182.6 bits (462), Expect = 4.4e-43
Identity = 97/190 (51.05%), Postives = 124/190 (65.26%), Query Frame = 1 

Query: 1   MALSPISTPFKWFSNTNLKLNLPRLRFKHKPTRSNPPPPPLLLTPAPPLAEAA------- 60
           M +  IS P KWFSN  L LN P    K K + S P  PP +  P PPL +         
Sbjct: 4   MGIPTISKPTKWFSNKGLSLNFPPFLSKSKSSTSLPLSPPAV--PLPPLNKTTKKEELRQ 63

Query: 61  -FRHLDADGDGKISGDELQSYFASVGEYMTRDDARSLIREFDGDGDLLLELGDFERLVKG 120
            F   D DGDGKIS +EL +YFAS+G+ ++ +  R +I++FD DGD LL   DF  L++G
Sbjct: 64  VFHRFDHDGDGKISSEELSAYFASIGDNVSSNVVRRVIKDFDNDGDELLGFEDFVELMEG 123

Query: 121 GEQEEKEDLKRAFEMFEGEKGCGFIGPAGLQKMFGRLGYVKSIEECMAMIGVFDVDGNGV 180
           G+  + +D+K AFEM+EG+KGCG I P GLQ+M GRLG V+S EEC AMIGVFD+DGNGV
Sbjct: 124 GD--DGDDIKGAFEMYEGDKGCGCITPVGLQQMLGRLGDVRSYEECKAMIGVFDLDGNGV 183

Query: 181 IDYREFLRMM 183
           +D+ EF  MM
Sbjct: 184 LDFNEFQHMM 189

[Close]
BLAST of CmoCh09G001730 vs. TrEMBL
Match: A5C797_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_034922 PE=4 SV=1)

HSP 1 Score: 179.5 bits (454), Expect = 3.7e-42
Identity = 96/178 (53.93%), Postives = 126/178 (70.79%), Query Frame = 1 

Query: 11  KWFSNTNLKLNLPRLRFKHKPTRSNP-PPPPLLLTPAPPLAE----AAFRHLDADGDGKI 70
           KWFS+   KL+LPR+  K K + S+P P P L+L P     E      F + D+DGDG+I
Sbjct: 15  KWFSSKTTKLSLPRVGSKSKSSSSSPCPSPSLVLGPKKSSKEDELRQVFGYFDSDGDGRI 74

Query: 71  SGDELQSYFASVGEYMTRDDARSLIREFDGDGDLLLELGDFERLVKGGEQEEKEDLKRAF 130
           SG+EL+ YF S+GE M+ ++A+ +I +FD DGD LLE  DF RL++   + + +DLKRAF
Sbjct: 75  SGEELRVYFQSIGESMSHEEAQKVIGDFDVDGDSLLEFQDFVRLMEQXSEXD-DDLKRAF 134

Query: 131 EMFEGEKGCGFIGPAGLQKMFGRLGYVKSIEECMAMIGVFDVDGNGVIDYREFLRMMT 184
           +MFE EKGCG I P GLQ+MF RLG  K+ EEC+AMI VFD+DGNGV+D+ EF RMMT
Sbjct: 135 QMFEVEKGCGCITPKGLQQMFNRLGDSKTYEECVAMIRVFDLDGNGVLDFHEFHRMMT 191

[Close]
BLAST of CmoCh09G001730 vs. TrEMBL
Match: F6H034_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0001g11830 PE=4 SV=1)

HSP 1 Score: 179.5 bits (454), Expect = 3.7e-42
Identity = 96/178 (53.93%), Postives = 126/178 (70.79%), Query Frame = 1 

Query: 11  KWFSNTNLKLNLPRLRFKHKPTRSNP-PPPPLLLTPAPPLAE----AAFRHLDADGDGKI 70
           KWFS+   KL+LPR+  K K + S+P P P L+L P     E      F + D+DGDG+I
Sbjct: 15  KWFSSKTTKLSLPRVGSKSKSSSSSPCPSPSLVLGPKKSSKEDELRQVFGYFDSDGDGRI 74

Query: 71  SGDELQSYFASVGEYMTRDDARSLIREFDGDGDLLLELGDFERLVKGGEQEEKEDLKRAF 130
           SG+EL+ YF S+GE M+ ++A+ +I +FD DGD LLE  DF RL++   + + +DLKRAF
Sbjct: 75  SGEELRVYFQSIGESMSHEEAQKVIGDFDVDGDSLLEFQDFVRLMEQSSEMD-DDLKRAF 134

Query: 131 EMFEGEKGCGFIGPAGLQKMFGRLGYVKSIEECMAMIGVFDVDGNGVIDYREFLRMMT 184
           +MFE EKGCG I P GLQ+MF RLG  K+ EEC+AMI VFD+DGNGV+D+ EF RMMT
Sbjct: 135 QMFEVEKGCGCITPKGLQQMFNRLGDSKTYEECVAMIRVFDLDGNGVLDFHEFHRMMT 191

[Close]
BLAST of CmoCh09G001730 vs. TAIR10
Match: AT3G50770.1 (AT3G50770.1 calmodulin-like 41)

HSP 1 Score: 135.2 bits (339), Expect = 4.1e-32
Identity = 85/197 (43.15%), Postives = 106/197 (53.81%), Query Frame = 1 

Query: 5   PISTPFKWFSNTNLKLNLPRLRFKHKPT----------RSNPPPPPLLLTPAPPLAEA-- 64
           P S  FKWFS   LKLNL     +  P           RSN      + +      E   
Sbjct: 8   PSSNSFKWFSTKTLKLNLSFQNRRRSPKSNSSSTLNSPRSNSDDNNNIKSHQASKEELRQ 67

Query: 65  AFRHLDADGDGKISGDELQSYFASVGEYMTRDDARSLIREFDGDGDLLLELGDFERLVK- 124
            F H D+DGDGKIS  EL+ YF SVGEY++ + A+  I E D D D  L   DF  L+  
Sbjct: 68  VFSHFDSDGDGKISAFELRHYFGSVGEYISHEAAQEAINEVDTDADGSLGFEDFVGLMTR 127

Query: 125 -----GGEQEEKEDLKRAFEMFEGEKGCGFIGPAGLQKMFGRLGYVKSIEECMAMIGVFD 184
                 GE +   +LK AFEMFE EKG G I P GLQKM  +LG  ++  EC AMI  +D
Sbjct: 128 RDLYGDGEVDGDGELKTAFEMFEVEKGSGCITPKGLQKMLVKLGESRTYGECEAMIKFYD 187

[Close]
BLAST of CmoCh09G001730 vs. TAIR10
Match: AT1G76650.1 (AT1G76650.1 calmodulin-like 38)

HSP 1 Score: 97.8 bits (242), Expect = 7.2e-21
Identity = 51/133 (38.35%), Postives = 86/133 (64.66%), Query Frame = 1 

Query: 51  EAAFRHLDADGDGKISGDELQSYFASVGEYMTRDDARSLIREFDGDGDLLLELGDFERLV 110
           EA F ++DA+ DG+IS +ELQ  F ++GE ++ ++A + +R  D DGD +L+  +F +L+
Sbjct: 45  EAVFSYMDANRDGRISPEELQKSFMTLGEQLSDEEAVAAVRLSDTDGDGMLDFEEFSQLI 104

Query: 111 KGGEQEEKE-DLKRAFEMFEGEKGCGFIGPAGLQKMFGRLGYVKSIEECMAMIGVFDVDG 170
           K  ++EEK+ +LK AF ++  E G   I P  L+ M  +LG  ++ ++C  MI  FD++ 
Sbjct: 105 KVDDEEEKKMELKGAFRLYIAE-GEDCITPRSLKMMLKKLGESRTTDDCRVMISAFDLNA 164

Query: 171 NGVIDYREFLRMM 183
           +GV+ + EF  MM
Sbjct: 165 DGVLSFDEFALMM 176

[Close]
BLAST of CmoCh09G001730 vs. TAIR10
Match: AT1G76640.1 (AT1G76640.1 Calcium-binding EF-hand family protein)

HSP 1 Score: 95.1 bits (235), Expect = 4.7e-20
Identity = 49/136 (36.03%), Postives = 84/136 (61.76%), Query Frame = 1 

Query: 51  EAAFRHLDADGDGKISGDELQSYFASVGEYMTRDDARSLIREFDGDGDLLLELGDFERLV 110
           EA F ++DA+ DG+IS +EL+  F ++GE M+ ++A + ++  D DGD +L++ +F  L+
Sbjct: 24  EAVFAYMDANRDGRISAEELKKSFKTLGEQMSDEEAEAAVKLSDIDGDGMLDINEFALLI 83

Query: 111 KGG----EQEEKEDLKRAFEMFEGEKGCGFIGPAGLQKMFGRLGYVKSIEECMAMIGVFD 170
           KG     E+E+K  +  AF M+  + G   I P  L+ M  +LG  ++ ++C  MI  FD
Sbjct: 84  KGNDEFTEEEKKRKIMEAFRMYIAD-GEDCITPGSLKMMLMKLGESRTTDDCKVMIQAFD 143

Query: 171 VDGNGVIDYREFLRMM 183
           ++ +GV+ + EF  MM
Sbjct: 144 LNADGVLSFDEFALMM 158

[Close]
BLAST of CmoCh09G001730 vs. TAIR10
Match: AT4G12860.1 (AT4G12860.1 EF hand calcium-binding protein family)

HSP 1 Score: 89.0 bits (219), Expect = 3.4e-18
Identity = 46/133 (34.59%), Postives = 84/133 (63.16%), Query Frame = 1 

Query: 54  FRHLDADGDGKISGDELQSYFASVGEYMTRDDARSLIREFDGDGDLLLELGDFERLVKG- 113
           F+  D +GDGKI+ +EL+ +F SVG  +  ++   +I + D +GD  +++ +F  L +  
Sbjct: 10  FQMFDKNGDGKIAKNELKDFFKSVGIMVPENEINEMIAKMDVNGDGAMDIDEFGSLYQEM 69

Query: 114 -GEQEEKEDLKRAFEMFEGEKGCGFIGPAGLQKMFGRLGYV--KSIEECMAMIGVFDVDG 173
             E+EE+ED++ AF +F+ + G GFI    L+ +   +G    +++E+C  MI   DVDG
Sbjct: 70  VEEKEEEEDMREAFRVFD-QNGDGFITDEELRSVLASMGLKQGRTLEDCKKMISKVDVDG 129

Query: 174 NGVIDYREFLRMM 183
           +G+++++EF +MM
Sbjct: 130 DGMVNFKEFKQMM 141

[Close]
BLAST of CmoCh09G001730 vs. TAIR10
Match: AT3G59440.1 (AT3G59440.1 Calcium-binding EF-hand family protein)

HSP 1 Score: 88.2 bits (217), Expect = 5.7e-18
Identity = 56/152 (36.84%), Postives = 87/152 (57.24%), Query Frame = 1 

Query: 35  NPPPPPLLLTPAPPLAEAAFRHLDADGDGKISGDELQSYFASVGEYMTRDDARSLIREFD 94
           NPPPP    T +P   +  F+  D +GDG+I+ +EL     ++G +M   D   +I++ D
Sbjct: 37  NPPPPDESETESPVDLKRVFQMFDKNGDGRITKEELNDSLENLGIFMPDKDLIQMIQKMD 96

Query: 95  GDGDLLLELGDFERLVKGGEQEEKE--DLKRAFEMFEGEKGCGFIGPAGLQKMFGRLGYV 154
            +GD  +++ +FE L  G   EEKE  D++ AF +F+ + G GFI    L  +   LG  
Sbjct: 97  ANGDGCVDINEFESLY-GSIVEEKEEGDMRDAFNVFD-QDGDGFITVEELNSVMTSLGLK 156

Query: 155 --KSIEECMAMIGVFDVDGNGVIDYREFLRMM 183
             K++E C  MI   D DG+G ++Y+EFL+MM
Sbjct: 157 QGKTLECCKEMIMQVDEDGDGRVNYKEFLQMM 186

[Close]
BLAST of CmoCh09G001730 vs. NCBI nr
Match: gi|659133233|ref|XP_008466624.1| (PREDICTED: probable calcium-binding protein CML41 [Cucumis melo])

HSP 1 Score: 274.6 bits (701), Expect = 1.2e-70
Identity = 137/183 (74.86%), Postives = 150/183 (81.97%), Query Frame = 1 

Query: 1   MALSPISTPFKWFSNTNLKLNLPRLRFKHKPTRSNPPPPPLLLTPAPPLAEAAFRHLDAD 60
           MA+S I+ PFKWF+ TN KLN P L  KHKP  S PP PP       PLAE AFRHLD D
Sbjct: 1   MAISTIAIPFKWFTKTNFKLNFPLLHSKHKPISSKPPTPP-------PLAEVAFRHLDID 60

Query: 61  GDGKISGDELQSYFASVGEYMTRDDARSLIREFDGDGDLLLELGDFERLVKGGEQEEKED 120
           GDGKISGDEL+SYFAS+GEYMT D A+S+I +FD DGD LLELGDFERLVKG E+E++ED
Sbjct: 61  GDGKISGDELRSYFASIGEYMTWDGAQSVIGDFDKDGDELLELGDFERLVKGEEEEQEED 120

Query: 121 LKRAFEMFEGEKGCGFIGPAGLQKMFGRLGYVKSIEECMAMIGVFDVDGNGVIDYREFLR 180
           LKRAFEMFEGEKGCGFIG  GLQKMFGRLGYVKS E+CM MI VFDVDG+GVIDY EFLR
Sbjct: 121 LKRAFEMFEGEKGCGFIGATGLQKMFGRLGYVKSKEDCMTMIKVFDVDGDGVIDYHEFLR 176

Query: 181 MMT 184
           MMT
Sbjct: 181 MMT 176

[Close]
BLAST of CmoCh09G001730 vs. NCBI nr
Match: gi|449460169|ref|XP_004147818.1| (PREDICTED: probable calcium-binding protein CML41 [Cucumis sativus])

HSP 1 Score: 259.2 bits (661), Expect = 5.3e-66
Identity = 138/185 (74.59%), Postives = 150/185 (81.08%), Query Frame = 1 

Query: 1   MALSPIST-PFKWFSNTNLKLNLPRLRFKHKPTRSNPPPPPLLLTPAP-PLAEAAFRHLD 60
           MA+S I+  PFKWF+ TN KLN P L  KHKPT S P        P P PLAE AFRHLD
Sbjct: 1   MAISSIAVIPFKWFTKTNFKLNFPLLHSKHKPTSSKPSTSG----PGPRPLAEVAFRHLD 60

Query: 61  ADGDGKISGDELQSYFASVGEYMTRDDARSLIREFDGDGDLLLELGDFERLVKGGEQEEK 120
            DGDGKIS +ELQSYFAS+GEYMT +DARS+I +FD DGD LLELGDFER+VKG E+EE+
Sbjct: 61  VDGDGKISCNELQSYFASIGEYMTWNDARSVIGDFDRDGDELLELGDFERMVKG-EEEEE 120

Query: 121 EDLKRAFEMFEGEKGCGFIGPAGLQKMFGRLGYVKSIEECMAMIGVFDVDGNGVIDYREF 180
           EDLKRAFEMFEGEKGCGFI   GLQKMFGRLGYVKS EECMAMI VFDVDG+GVIDY EF
Sbjct: 121 EDLKRAFEMFEGEKGCGFIEATGLQKMFGRLGYVKSKEECMAMIKVFDVDGDGVIDYHEF 180

Query: 181 LRMMT 184
           LRMMT
Sbjct: 181 LRMMT 180

[Close]
BLAST of CmoCh09G001730 vs. NCBI nr
Match: gi|590593030|ref|XP_007017447.1| (Calmodulin-like 41, putative [Theobroma cacao])

HSP 1 Score: 195.3 bits (495), Expect = 9.4e-47
Identity = 98/188 (52.13%), Postives = 136/188 (72.34%), Query Frame = 1 

Query: 1   MALSPISTPFKWFSNTNLKLNLPRLRFKHKPTRSNPPPPPLLLTPAPPLA------EAAF 60
           M ++ IS P KWFSN +L+L+ PRLR K K + S+ P P ++  P P ++      +  F
Sbjct: 1   MEIASISKPIKWFSNKSLRLSFPRLRSKSK-SSSSLPSPTVIRPPTPNISTKEEDLQVVF 60

Query: 61  RHLDADGDGKISGDELQSYFASVGEYMTRDDARSLIREFDGDGDLLLELGDFERLVKGGE 120
           R  D+DGDGKIS +EL +YFAS+G+Y++R +A+ +I++FD +GD  LE  DF +L++GG 
Sbjct: 61  RRFDSDGDGKISSEELSAYFASIGDYVSRQEAQRVIKDFDNNGDNRLEFNDFVKLMEGG- 120

Query: 121 QEEKEDLKRAFEMFEGEKGCGFIGPAGLQKMFGRLGYVKSIEECMAMIGVFDVDGNGVID 180
            E  +D+KRAFEM+E +KGCG I P GLQ+M  RLG VKS EEC+AMI VFD+DGNGV+D
Sbjct: 121 NEGDDDIKRAFEMYEVDKGCGCITPVGLQQMLNRLGDVKSYEECVAMIRVFDLDGNGVLD 180

Query: 181 YREFLRMM 183
           + EF +MM
Sbjct: 181 FHEFQQMM 186

[Close]
BLAST of CmoCh09G001730 vs. NCBI nr
Match: gi|823237249|ref|XP_012451280.1| (PREDICTED: probable calcium-binding protein CML41 [Gossypium raimondii])

HSP 1 Score: 182.6 bits (462), Expect = 6.3e-43
Identity = 97/190 (51.05%), Postives = 124/190 (65.26%), Query Frame = 1 

Query: 1   MALSPISTPFKWFSNTNLKLNLPRLRFKHKPTRSNPPPPPLLLTPAPPLAEAA------- 60
           M +  IS P KWFSN  L LN P    K K + S P  PP +  P PPL +         
Sbjct: 6   MGIPTISKPTKWFSNKGLSLNFPPFLSKSKSSTSLPLSPPAV--PLPPLNKTTKKEELRQ 65

Query: 61  -FRHLDADGDGKISGDELQSYFASVGEYMTRDDARSLIREFDGDGDLLLELGDFERLVKG 120
            F   D DGDGKIS +EL +YFAS+G+ ++ +  R +I++FD DGD LL   DF  L++G
Sbjct: 66  VFHRFDHDGDGKISSEELSAYFASIGDNVSSNVVRRVIKDFDNDGDELLGFEDFVELMEG 125

Query: 121 GEQEEKEDLKRAFEMFEGEKGCGFIGPAGLQKMFGRLGYVKSIEECMAMIGVFDVDGNGV 180
           G+  + +D+K AFEM+EG+KGCG I P GLQ+M GRLG V+S EEC AMIGVFD+DGNGV
Sbjct: 126 GD--DGDDIKGAFEMYEGDKGCGCITPVGLQQMLGRLGDVRSYEECKAMIGVFDLDGNGV 185

Query: 181 IDYREFLRMM 183
           +D+ EF  MM
Sbjct: 186 LDFNEFQHMM 191

[Close]
BLAST of CmoCh09G001730 vs. NCBI nr
Match: gi|763796772|gb|KJB63727.1| (hypothetical protein B456_010G012800 [Gossypium raimondii])

HSP 1 Score: 182.6 bits (462), Expect = 6.3e-43
Identity = 97/190 (51.05%), Postives = 124/190 (65.26%), Query Frame = 1 

Query: 1   MALSPISTPFKWFSNTNLKLNLPRLRFKHKPTRSNPPPPPLLLTPAPPLAEAA------- 60
           M +  IS P KWFSN  L LN P    K K + S P  PP +  P PPL +         
Sbjct: 4   MGIPTISKPTKWFSNKGLSLNFPPFLSKSKSSTSLPLSPPAV--PLPPLNKTTKKEELRQ 63

Query: 61  -FRHLDADGDGKISGDELQSYFASVGEYMTRDDARSLIREFDGDGDLLLELGDFERLVKG 120
            F   D DGDGKIS +EL +YFAS+G+ ++ +  R +I++FD DGD LL   DF  L++G
Sbjct: 64  VFHRFDHDGDGKISSEELSAYFASIGDNVSSNVVRRVIKDFDNDGDELLGFEDFVELMEG 123

Query: 121 GEQEEKEDLKRAFEMFEGEKGCGFIGPAGLQKMFGRLGYVKSIEECMAMIGVFDVDGNGV 180
           G+  + +D+K AFEM+EG+KGCG I P GLQ+M GRLG V+S EEC AMIGVFD+DGNGV
Sbjct: 124 GD--DGDDIKGAFEMYEGDKGCGCITPVGLQQMLGRLGDVRSYEECKAMIGVFDLDGNGV 183

Query: 181 IDYREFLRMM 183
           +D+ EF  MM
Sbjct: 184 LDFNEFQHMM 189

The following BLAST results are available for this feature:
BLAST of CmoCh09G001730 vs. Swiss-Prot
Match NameE-valueIdentityDescription
CML41_ARATH7.3e-3143.15Probable calcium-binding protein CML41 OS=Arabidopsis thaliana GN=CML41 PE=2 SV=... [more]
CML38_ARATH1.3e-1938.35Calcium-binding protein CML38 OS=Arabidopsis thaliana GN=CML38 PE=2 SV=1[more]
CML39_ARATH8.3e-1936.03Calcium-binding protein CML39 OS=Arabidopsis thaliana GN=CML39 PE=2 SV=1[more]
CML15_ORYSJ2.4e-1837.93Probable calcium-binding protein CML15 OS=Oryza sativa subsp. japonica GN=CML15 ... [more]
CML31_ORYSJ3.2e-1840.56Probable calcium-binding protein CML31 OS=Oryza sativa subsp. japonica GN=CML31 ... [more]
BLAST of CmoCh09G001730 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LG17_CUCSA3.7e-6674.59Calmodulin OS=Cucumis sativus GN=Csa_3G854250 PE=4 SV=1[more]
A0A061FDC7_THECC6.6e-4752.13Calmodulin-like 41, putative OS=Theobroma cacao GN=TCM_033977 PE=4 SV=1[more]
A0A0D2R0D0_GOSRA4.4e-4351.05Uncharacterized protein OS=Gossypium raimondii GN=B456_010G012800 PE=4 SV=1[more]
A5C797_VITVI3.7e-4253.93Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_034922 PE=4 SV=1[more]
F6H034_VITVI3.7e-4253.93Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0001g11830 PE=4 SV=... [more]
BLAST of CmoCh09G001730 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G50770.14.1e-3243.15 calmodulin-like 41[more]
AT1G76650.17.2e-2138.35 calmodulin-like 38[more]
AT1G76640.14.7e-2036.03 Calcium-binding EF-hand family protein[more]
AT4G12860.13.4e-1834.59 EF hand calcium-binding protein family[more]
AT3G59440.15.7e-1836.84 Calcium-binding EF-hand family protein[more]
BLAST of CmoCh09G001730 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659133233|ref|XP_008466624.1|1.2e-7074.86PREDICTED: probable calcium-binding protein CML41 [Cucumis melo][more]
gi|449460169|ref|XP_004147818.1|5.3e-6674.59PREDICTED: probable calcium-binding protein CML41 [Cucumis sativus][more]
gi|590593030|ref|XP_007017447.1|9.4e-4752.13Calmodulin-like 41, putative [Theobroma cacao][more]
gi|823237249|ref|XP_012451280.1|6.3e-4351.05PREDICTED: probable calcium-binding protein CML41 [Gossypium raimondii][more]
gi|763796772|gb|KJB63727.1|6.3e-4351.05hypothetical protein B456_010G012800 [Gossypium raimondii][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR002048EF_hand_dom
IPR011992EF-hand-dom_pair
IPR018247EF_Hand_1_Ca_BS
Vocabulary: Molecular Function
TermDefinition
GO:0005509calcium ion binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0005509 calcium ion binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh09G001730.1CmoCh09G001730.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002048EF-hand domainPFAMPF00036EF-hand_1coord: 157..183
score: 9.
IPR002048EF-hand domainPFAMPF13499EF-hand_7coord: 52..110
score: 2.
IPR002048EF-hand domainSMARTSM00054efh_1coord: 49..77
score: 7.2E-4coord: 85..113
score: 15.0coord: 157..183
score:
IPR002048EF-hand domainPROFILEPS50222EF_HAND_2coord: 81..116
score: 8.739coord: 153..183
score: 13.565coord: 45..80
score: 12
IPR011992EF-hand domain pairGENE3DG3DSA:1.10.238.10coord: 51..111
score: 1.4E-14coord: 112..183
score: 1.2
IPR011992EF-hand domain pairunknownSSF47473EF-handcoord: 52..183
score: 9.0
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 166..178
score: -coord: 58..70
scor
NoneNo IPR availablePANTHERPTHR10891EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEINcoord: 53..183
score: 1.3
NoneNo IPR availablePANTHERPTHR10891:SF568CALCIUM-BINDING PROTEIN CML41-RELATEDcoord: 53..183
score: 1.3

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmoCh09G001730Cucsa.342090Cucumber (Gy14) v1cgycmoB0920
CmoCh09G001730CmaCh09G001770Cucurbita maxima (Rimu)cmacmoB027
CmoCh09G001730Cla020738Watermelon (97103) v1cmowmB018
CmoCh09G001730Csa3G854250Cucumber (Chinese Long) v2cmocuB008
CmoCh09G001730MELO3C003889Melon (DHL92) v3.5.1cmomeB021
CmoCh09G001730ClCG05G019230Watermelon (Charleston Gray)cmowcgB015
CmoCh09G001730CSPI03G42430Wild cucumber (PI 183967)cmocpiB008
CmoCh09G001730Lsi04G016350Bottle gourd (USVL1VR-Ls)cmolsiB012
CmoCh09G001730Cp4.1LG06g01250Cucurbita pepo (Zucchini)cmocpeB034
CmoCh09G001730MELO3C003889.2Melon (DHL92) v3.6.1cmomedB020
CmoCh09G001730CsaV3_3G044850Cucumber (Chinese Long) v3cmocucB0012
CmoCh09G001730Cla97C05G100760Watermelon (97103) v2cmowmbB014
CmoCh09G001730Bhi11G002149Wax gourdcmowgoB0000
CmoCh09G001730CsGy3G039950Cucumber (Gy14) v2cgybcmoB260
CmoCh09G001730Carg08742Silver-seed gourdcarcmoB0144
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh09G001730Cucurbita pepo (Zucchini)cmocpeB006
CmoCh09G001730Cucurbita pepo (Zucchini)cmocpeB020
CmoCh09G001730Cucurbita pepo (Zucchini)cmocpeB037
CmoCh09G001730Bottle gourd (USVL1VR-Ls)cmolsiB020
CmoCh09G001730Cucumber (Gy14) v2cgybcmoB138
CmoCh09G001730Melon (DHL92) v3.6.1cmomedB012
CmoCh09G001730Melon (DHL92) v3.6.1cmomedB036
CmoCh09G001730Silver-seed gourdcarcmoB0255
CmoCh09G001730Cucumber (Chinese Long) v3cmocucB0004
CmoCh09G001730Watermelon (97103) v2cmowmbB023
CmoCh09G001730Wax gourdcmowgoB0005
CmoCh09G001730Cucurbita maxima (Rimu)cmacmoB435
CmoCh09G001730Cucurbita moschata (Rifu)cmocmoB033
CmoCh09G001730Cucurbita moschata (Rifu)cmocmoB004
CmoCh09G001730Cucurbita moschata (Rifu)cmocmoB017
CmoCh09G001730Cucurbita moschata (Rifu)cmocmoB037
CmoCh09G001730Cucumber (Gy14) v1cgycmoB0640
CmoCh09G001730Cucurbita maxima (Rimu)cmacmoB165
CmoCh09G001730Cucurbita maxima (Rimu)cmacmoB632
CmoCh09G001730Cucurbita maxima (Rimu)cmacmoB755
CmoCh09G001730Cucurbita maxima (Rimu)cmacmoB841
CmoCh09G001730Wild cucumber (PI 183967)cmocpiB002
CmoCh09G001730Wild cucumber (PI 183967)cmocpiB022
CmoCh09G001730Cucumber (Chinese Long) v2cmocuB002
CmoCh09G001730Melon (DHL92) v3.5.1cmomeB012
CmoCh09G001730Watermelon (Charleston Gray)cmowcgB023
CmoCh09G001730Watermelon (97103) v1cmowmB007