MELO3C003889.2 (gene) Melon (DHL92) v3.6.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C003889.2
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.6.1)
Description	Calmodulin
Location	chr04 : 6281019 .. 6281581 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexonthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCATTTCGACCATTGCCATTCCCTTCAAATGGTTTACCAAAACCAATTTCAAGCTCAATTTCCCTCTCCTTCACTCCAAACACAAACCAATTTCCTCTAAACCTCCTACGCCACCGCCCCTTGCCGAGGTTGCTTTTCGCCATCTCGACATCGATGGAGATGGAAAAATCTCCGGCGATGAGCTACGATCCTACTTCGCATCGATAGGGGAGTACATGACATGGGATGGTGCTCAAAGTGTGATTGGAGATTTTGACAAAGACGGTGACGAGTTACTAGAGCTTGGAGATTTTGAGCGACTGGTAAAGGGAGAGGAGGAGGAGCAAGAGGAGGATTTGAAAAGGGCTTTTGAGATGTTTGAAGGTGAAAAGGGATGTGGATTCATTGGGGCAACGGGATTGCAGAAGATGTTTGGGAGGCTTGGATACGTGAAATCAAAAGAAGACTGCATGACTATGATCAAAGTGTTTGATGTTGATGGCGATGGTGTAATTGATTATCATGAATTTCTTAGAATGATGACTTGACTACTTAATTTAACGTCCCAATAAGTTATCAT

mRNA sequence

ATGGCCATTTCGACCATTGCCATTCCCTTCAAATGGTTTACCAAAACCAATTTCAAGCTCAATTTCCCTCTCCTTCACTCCAAACACAAACCAATTTCCTCTAAACCTCCTACGCCACCGCCCCTTGCCGAGGTTGCTTTTCGCCATCTCGACATCGATGGAGATGGAAAAATCTCCGGCGATGAGCTACGATCCTACTTCGCATCGATAGGGGAGTACATGACATGGGATGGTGCTCAAAGTGTGATTGGAGATTTTGACAAAGACGGTGACGAGTTACTAGAGCTTGGAGATTTTGAGCGACTGGTAAAGGGAGAGGAGGAGGAGCAAGAGGAGGATTTGAAAAGGGCTTTTGAGATGTTTGAAGGTGAAAAGGGATGTGGATTCATTGGGGCAACGGGATTGCAGAAGATGTTTGGGAGGCTTGGATACGTGAAATCAAAAGAAGACTGCATGACTATGATCAAAGTGTTTGATGTTGATGGCGATGGTGTAATTGATTATCATGAATTTCTTAGAATGATGACTTGACTACTTAATTTAACGTCCCAATAAGTTATCAT

Coding sequence (CDS)

ATGGCCATTTCGACCATTGCCATTCCCTTCAAATGGTTTACCAAAACCAATTTCAAGCTCAATTTCCCTCTCCTTCACTCCAAACACAAACCAATTTCCTCTAAACCTCCTACGCCACCGCCCCTTGCCGAGGTTGCTTTTCGCCATCTCGACATCGATGGAGATGGAAAAATCTCCGGCGATGAGCTACGATCCTACTTCGCATCGATAGGGGAGTACATGACATGGGATGGTGCTCAAAGTGTGATTGGAGATTTTGACAAAGACGGTGACGAGTTACTAGAGCTTGGAGATTTTGAGCGACTGGTAAAGGGAGAGGAGGAGGAGCAAGAGGAGGATTTGAAAAGGGCTTTTGAGATGTTTGAAGGTGAAAAGGGATGTGGATTCATTGGGGCAACGGGATTGCAGAAGATGTTTGGGAGGCTTGGATACGTGAAATCAAAAGAAGACTGCATGACTATGATCAAAGTGTTTGATGTTGATGGCGATGGTGTAATTGATTATCATGAATTTCTTAGAATGATGACTTGA

Protein sequence

MAISTIAIPFKWFTKTNFKLNFPLLHSKHKPISSKPPTPPPLAEVAFRHLDIDGDGKISGDELRSYFASIGEYMTWDGAQSVIGDFDKDGDELLELGDFERLVKGEEEEQEEDLKRAFEMFEGEKGCGFIGATGLQKMFGRLGYVKSKEDCMTMIKVFDVDGDGVIDYHEFLRMMT

Homology

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BLAST of MELO3C003889.2 vs. NCBI nr
Match: XP_008466624.1 (PREDICTED: probable calcium-binding protein CML41 [Cucumis melo])

HSP 1 Score: 362.5 bits (929), Expect = 8.3e-97
Identity = 176/176 (100.00%), Postives = 176/176 (100.00%), Query Frame = 0


Query: 1   MAISTIAIPFKWFTKTNFKLNFPLLHSKHKPISSKPPTPPPLAEVAFRHLDIDGDGKISG 60
           MAISTIAIPFKWFTKTNFKLNFPLLHSKHKPISSKPPTPPPLAEVAFRHLDIDGDGKISG
Sbjct: 1   MAISTIAIPFKWFTKTNFKLNFPLLHSKHKPISSKPPTPPPLAEVAFRHLDIDGDGKISG 60

Query: 61  DELRSYFASIGEYMTWDGAQSVIGDFDKDGDELLELGDFERLVKGEEEEQEEDLKRAFEM 120
           DELRSYFASIGEYMTWDGAQSVIGDFDKDGDELLELGDFERLVKGEEEEQEEDLKRAFEM
Sbjct: 61  DELRSYFASIGEYMTWDGAQSVIGDFDKDGDELLELGDFERLVKGEEEEQEEDLKRAFEM 120

Query: 121 FEGEKGCGFIGATGLQKMFGRLGYVKSKEDCMTMIKVFDVDGDGVIDYHEFLRMMT 177
           FEGEKGCGFIGATGLQKMFGRLGYVKSKEDCMTMIKVFDVDGDGVIDYHEFLRMMT
Sbjct: 121 FEGEKGCGFIGATGLQKMFGRLGYVKSKEDCMTMIKVFDVDGDGVIDYHEFLRMMT 176

[Close]

BLAST of MELO3C003889.2 vs. NCBI nr
Match: XP_004147818.1 (PREDICTED: probable calcium-binding protein CML41 [Cucumis sativus] >KGN59929.1 Calmodulin [Cucumis sativus])

HSP 1 Score: 314.3 bits (804), Expect = 2.6e-82
Identity = 159/181 (87.85%), Postives = 168/181 (92.82%), Query Frame = 0


Query: 1   MAISTIA-IPFKWFTKTNFKLNFPLLHSKHKPISSKP----PTPPPLAEVAFRHLDIDGD 60
           MAIS+IA IPFKWFTKTNFKLNFPLLHSKHKP SSKP    P P PLAEVAFRHLD+DGD
Sbjct: 1   MAISSIAVIPFKWFTKTNFKLNFPLLHSKHKPTSSKPSTSGPGPRPLAEVAFRHLDVDGD 60

Query: 61  GKISGDELRSYFASIGEYMTWDGAQSVIGDFDKDGDELLELGDFERLVKGEEEEQEEDLK 120
           GKIS +EL+SYFASIGEYMTW+ A+SVIGDFD+DGDELLELGDFER+VKGEEEE EEDLK
Sbjct: 61  GKISCNELQSYFASIGEYMTWNDARSVIGDFDRDGDELLELGDFERMVKGEEEE-EEDLK 120

Query: 121 RAFEMFEGEKGCGFIGATGLQKMFGRLGYVKSKEDCMTMIKVFDVDGDGVIDYHEFLRMM 177
           RAFEMFEGEKGCGFI ATGLQKMFGRLGYVKSKE+CM MIKVFDVDGDGVIDYHEFLRMM
Sbjct: 121 RAFEMFEGEKGCGFIEATGLQKMFGRLGYVKSKEECMAMIKVFDVDGDGVIDYHEFLRMM 180

[Close]

BLAST of MELO3C003889.2 vs. NCBI nr
Match: XP_022974919.1 (probable calcium-binding protein CML41 [Cucurbita maxima])

HSP 1 Score: 261.2 bits (666), Expect = 2.6e-66
Identity = 134/184 (72.83%), Postives = 145/184 (78.80%), Query Frame = 0


Query: 1   MAISTIAIPFKWFTKTNFKLNFPLLHSKHKP--------ISSKPPTPPPLAEVAFRHLDI 60
           MA+S I+ PFKWF+ TNFKLNFP L  KHKP                  LAE AFRHLD 
Sbjct: 15  MALSPISTPFKWFSNTNFKLNFPRLRFKHKPTPXXXXXXXXXXXXXXXXLAEAAFRHLDA 74

Query: 61  DGDGKISGDELRSYFASIGEYMTWDGAQSVIGDFDKDGDELLELGDFERLVKGEEEEQEE 120
           DGDGKISGDEL+SYFAS+GEYMT D A+S+I +FD DGD LLELGDFERLVKG EEE++E
Sbjct: 75  DGDGKISGDELQSYFASVGEYMTRDDARSLIREFDGDGDLLLELGDFERLVKGGEEEEKE 134

Query: 121 DLKRAFEMFEGEKGCGFIGATGLQKMFGRLGYVKSKEDCMTMIKVFDVDGDGVIDYHEFL 177
           DLK AFEMFEGEKGCGFIG  GLQKMFGRLGYVKS E+CM MI VFDVDGDGVIDY EFL
Sbjct: 135 DLKMAFEMFEGEKGCGFIGPPGLQKMFGRLGYVKSIEECMAMIGVFDVDGDGVIDYREFL 194

[Close]

BLAST of MELO3C003889.2 vs. NCBI nr
Match: XP_023535419.1 (calmodulin-like protein 2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 261.2 bits (666), Expect = 2.6e-66
Identity = 133/184 (72.28%), Postives = 145/184 (78.80%), Query Frame = 0


Query: 1   MAISTIAIPFKWFTKTNFKLNFPLLHSKHKP--------ISSKPPTPPPLAEVAFRHLDI 60
           MA+S ++ PFKWF+ TNF LNFP L  KHKP                  LAE AFRHLD 
Sbjct: 38  MALSPVSTPFKWFSNTNFNLNFPRLRFKHKPTRXXXXXXXXXXXXXXXXLAEAAFRHLDA 97

Query: 61  DGDGKISGDELRSYFASIGEYMTWDGAQSVIGDFDKDGDELLELGDFERLVKGEEEEQEE 120
           DGDGKISGDEL+SYFAS+GEYMT D A+S+I +FD DGD LLELGDFERLVKG EEE++E
Sbjct: 98  DGDGKISGDELQSYFASVGEYMTRDDARSLIREFDWDGDLLLELGDFERLVKGGEEEEKE 157

Query: 121 DLKRAFEMFEGEKGCGFIGATGLQKMFGRLGYVKSKEDCMTMIKVFDVDGDGVIDYHEFL 177
           DLKRAFEMFEGEKGCGFIG  GLQKMFGRLGYVKS E+CM MI VFDVDGDGVIDY EFL
Sbjct: 158 DLKRAFEMFEGEKGCGFIGPAGLQKMFGRLGYVKSIEECMAMIGVFDVDGDGVIDYREFL 217

[Close]

BLAST of MELO3C003889.2 vs. NCBI nr
Match: XP_022936314.1 (probable calcium-binding protein CML41 [Cucurbita moschata])

HSP 1 Score: 258.5 bits (659), Expect = 1.7e-65
Identity = 132/183 (72.13%), Postives = 145/183 (79.23%), Query Frame = 0


Query: 1   MAISTIAIPFKWFTKTNFKLNFPLLHSKHKPISS-------KPPTPPPLAEVAFRHLDID 60
           MA+S I+ PFKWF+ TN KLN P L  KHKP  S              LAE AFRHLD D
Sbjct: 1   MALSPISTPFKWFSNTNLKLNLPRLRFKHKPTRSXXXXXXXXXXXXXXLAEAAFRHLDAD 60

Query: 61  GDGKISGDELRSYFASIGEYMTWDGAQSVIGDFDKDGDELLELGDFERLVKGEEEEQEED 120
           GDGKISGDEL+SYFAS+GEYMT D A+S+I +FD DGD LLELGDFERLVKG E+E++ED
Sbjct: 61  GDGKISGDELQSYFASVGEYMTRDDARSLIREFDGDGDLLLELGDFERLVKGGEQEEKED 120

Query: 121 LKRAFEMFEGEKGCGFIGATGLQKMFGRLGYVKSKEDCMTMIKVFDVDGDGVIDYHEFLR 177
           LKRAFEMFEGEKGCGFIG  GLQKMFGRLGYVKS E+CM MI VFDVDG+GVIDY EFLR
Sbjct: 121 LKRAFEMFEGEKGCGFIGPAGLQKMFGRLGYVKSIEECMAMIGVFDVDGNGVIDYREFLR 180

[Close]

BLAST of MELO3C003889.2 vs. TAIR10
Match: AT3G50770.1 (calmodulin-like 41)

HSP 1 Score: 128.3 bits (321), Expect = 4.8e-30
Identity = 77/193 (39.90%), Postives = 102/193 (52.85%), Query Frame = 0


Query: 10  FKWFTKTNFKLNFPLLHSKHKP--------------------ISSKPPTPPPLAEVAFRH 69
           FKWF+    KLN    + +  P                    I S   +   L +V F H
Sbjct: 13  FKWFSTKTLKLNLSFQNRRRSPKSNSSSTLXXXXXXXXXXXXIKSHQASKEELRQV-FSH 72

Query: 70  LDIDGDGKISGDELRSYFASIGEYMTWDGAQSVIGDFDKDGDELLELGDFERLVKGE--- 129
            D DGDGKIS  ELR YF S+GEY++ + AQ  I + D D D  L   DF  L+      
Sbjct: 73  FDSDGDGKISAFELRHYFGSVGEYISHEAAQEAINEVDTDADGSLGFEDFVGLMTRRDLY 132

Query: 130 ---EEEQEEDLKRAFEMFEGEKGCGFIGATGLQKMFGRLGYVKSKEDCMTMIKVFDVDGD 177
              E + + +LK AFEMFE EKG G I   GLQKM  +LG  ++  +C  MIK +D+DG+
Sbjct: 133 GDGEVDGDGELKTAFEMFEVEKGSGCITPKGLQKMLVKLGESRTYGECEAMIKFYDIDGN 192

[Close]

BLAST of MELO3C003889.2 vs. TAIR10
Match: AT1G76640.1 (Calcium-binding EF-hand family protein)

HSP 1 Score: 91.7 bits (226), Expect = 5.0e-19
Identity = 50/136 (36.76%), Postives = 82/136 (60.29%), Query Frame = 0


Query: 44  EVAFRHLDIDGDGKISGDELRSYFASIGEYMTWDGAQSVIGDFDKDGDELLELGDFERLV 103
           E  F ++D + DG+IS +EL+  F ++GE M+ + A++ +   D DGD +L++ +F  L+
Sbjct: 24  EAVFAYMDANRDGRISAEELKKSFKTLGEQMSDEEAEAAVKLSDIDGDGMLDINEFALLI 83

Query: 104 KGEEEEQEEDLKR----AFEMFEGEKGCGFIGATGLQKMFGRLGYVKSKEDCMTMIKVFD 163
           KG +E  EE+ KR    AF M+  + G   I    L+ M  +LG  ++ +DC  MI+ FD
Sbjct: 84  KGNDEFTEEEKKRKIMEAFRMYIAD-GEDCITPGSLKMMLMKLGESRTTDDCKVMIQAFD 143

Query: 164 VDGDGVIDYHEFLRMM 176
           ++ DGV+ + EF  MM
Sbjct: 144 LNADGVLSFDEFALMM 158

[Close]

BLAST of MELO3C003889.2 vs. TAIR10
Match: AT1G76650.1 (calmodulin-like 38)

HSP 1 Score: 88.6 bits (218), Expect = 4.2e-18
Identity = 48/133 (36.09%), Postives = 81/133 (60.90%), Query Frame = 0


Query: 44  EVAFRHLDIDGDGKISGDELRSYFASIGEYMTWDGAQSVIGDFDKDGDELLELGDFERLV 103
           E  F ++D + DG+IS +EL+  F ++GE ++ + A + +   D DGD +L+  +F +L+
Sbjct: 45  EAVFSYMDANRDGRISPEELQKSFMTLGEQLSDEEAVAAVRLSDTDGDGMLDFEEFSQLI 104

Query: 104 K-GEEEEQEEDLKRAFEMFEGEKGCGFIGATGLQKMFGRLGYVKSKEDCMTMIKVFDVDG 163
           K  +EEE++ +LK AF ++  E G   I    L+ M  +LG  ++ +DC  MI  FD++ 
Sbjct: 105 KVDDEEEKKMELKGAFRLYIAE-GEDCITPRSLKMMLKKLGESRTTDDCRVMISAFDLNA 164

Query: 164 DGVIDYHEFLRMM 176
           DGV+ + EF  MM
Sbjct: 165 DGVLSFDEFALMM 176

[Close]

BLAST of MELO3C003889.2 vs. TAIR10
Match: AT4G12860.1 (EF hand calcium-binding protein family)

HSP 1 Score: 87.8 bits (216), Expect = 7.2e-18
Identity = 48/133 (36.09%), Postives = 81/133 (60.90%), Query Frame = 0


Query: 47  FRHLDIDGDGKISGDELRSYFASIGEYMTWDGAQSVIGDFDKDGDELLELGDFERLVKG- 106
           F+  D +GDGKI+ +EL+ +F S+G  +  +    +I   D +GD  +++ +F  L +  
Sbjct: 10  FQMFDKNGDGKIAKNELKDFFKSVGIMVPENEINEMIAKMDVNGDGAMDIDEFGSLYQEM 69

Query: 107 -EEEEQEEDLKRAFEMFEGEKGCGFIGATGLQKMFGRLGYVKSK--EDCMTMIKVFDVDG 166
            EE+E+EED++ AF +F+ + G GFI    L+ +   +G  + +  EDC  MI   DVDG
Sbjct: 70  VEEKEEEEDMREAFRVFD-QNGDGFITDEELRSVLASMGLKQGRTLEDCKKMISKVDVDG 129

Query: 167 DGVIDYHEFLRMM 176
           DG++++ EF +MM
Sbjct: 130 DGMVNFKEFKQMM 141

[Close]

BLAST of MELO3C003889.2 vs. TAIR10
Match: AT5G42380.1 (calmodulin like 37)

HSP 1 Score: 85.5 bits (210), Expect = 3.6e-17
Identity = 50/134 (37.31%), Postives = 82/134 (61.19%), Query Frame = 0


Query: 47  FRHLDIDGDGKISGDELRSYFASIGEYMTWDGAQSVIGDFDKDGDELLELGDFERLVKGE 106
           F ++D + DGKISG+EL+S  + +G  ++    + V+   D DGD  ++  +F +L++GE
Sbjct: 54  FDYMDANSDGKISGEELQSCVSLLGGALSSREVEEVVKTSDVDGDGFIDFEEFLKLMEGE 113

Query: 107 ---EEEQEEDLKRAFEMF--EGEKGCGFIGATGLQKMFGRLGYVKSKEDCMTMIKVFDVD 166
              +EE+ ++LK AF M+  EGE+   FI A  L++   RLG   + + C  MI+ FD +
Sbjct: 114 DGSDEERRKELKEAFGMYVMEGEE---FITAASLRRTLSRLGESCTVDACKVMIRGFDQN 173

Query: 167 GDGVIDYHEFLRMM 176
            DGV+ + EF+ MM
Sbjct: 174 DDGVLSFDEFVLMM 184

[Close]

BLAST of MELO3C003889.2 vs. Swiss-Prot
Match: sp|Q8L3R2|CML41_ARATH (Probable calcium-binding protein CML41 OS=Arabidopsis thaliana OX=3702 GN=CML41 PE=2 SV=2)

HSP 1 Score: 128.3 bits (321), Expect = 8.7e-29
Identity = 77/193 (39.90%), Postives = 102/193 (52.85%), Query Frame = 0


Query: 10  FKWFTKTNFKLNFPLLHSKHKP--------------------ISSKPPTPPPLAEVAFRH 69
           FKWF+    KLN    + +  P                    I S   +   L +V F H
Sbjct: 13  FKWFSTKTLKLNLSFQNRRRSPKSNSSSTLXXXXXXXXXXXXIKSHQASKEELRQV-FSH 72

Query: 70  LDIDGDGKISGDELRSYFASIGEYMTWDGAQSVIGDFDKDGDELLELGDFERLVKGE--- 129
            D DGDGKIS  ELR YF S+GEY++ + AQ  I + D D D  L   DF  L+      
Sbjct: 73  FDSDGDGKISAFELRHYFGSVGEYISHEAAQEAINEVDTDADGSLGFEDFVGLMTRRDLY 132

Query: 130 ---EEEQEEDLKRAFEMFEGEKGCGFIGATGLQKMFGRLGYVKSKEDCMTMIKVFDVDGD 177
              E + + +LK AFEMFE EKG G I   GLQKM  +LG  ++  +C  MIK +D+DG+
Sbjct: 133 GDGEVDGDGELKTAFEMFEVEKGSGCITPKGLQKMLVKLGESRTYGECEAMIKFYDIDGN 192

[Close]

BLAST of MELO3C003889.2 vs. Swiss-Prot
Match: sp|Q9SRE7|CML39_ARATH (Calcium-binding protein CML39 OS=Arabidopsis thaliana OX=3702 GN=CML39 PE=2 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 9.0e-18
Identity = 50/136 (36.76%), Postives = 82/136 (60.29%), Query Frame = 0


Query: 44  EVAFRHLDIDGDGKISGDELRSYFASIGEYMTWDGAQSVIGDFDKDGDELLELGDFERLV 103
           E  F ++D + DG+IS +EL+  F ++GE M+ + A++ +   D DGD +L++ +F  L+
Sbjct: 24  EAVFAYMDANRDGRISAEELKKSFKTLGEQMSDEEAEAAVKLSDIDGDGMLDINEFALLI 83

Query: 104 KGEEEEQEEDLKR----AFEMFEGEKGCGFIGATGLQKMFGRLGYVKSKEDCMTMIKVFD 163
           KG +E  EE+ KR    AF M+  + G   I    L+ M  +LG  ++ +DC  MI+ FD
Sbjct: 84  KGNDEFTEEEKKRKIMEAFRMYIAD-GEDCITPGSLKMMLMKLGESRTTDDCKVMIQAFD 143

Query: 164 VDGDGVIDYHEFLRMM 176
           ++ DGV+ + EF  MM
Sbjct: 144 LNADGVLSFDEFALMM 158

[Close]

BLAST of MELO3C003889.2 vs. Swiss-Prot
Match: sp|Q9SRE6|CML38_ARATH (Calcium-binding protein CML38 OS=Arabidopsis thaliana OX=3702 GN=CML38 PE=2 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 7.6e-17
Identity = 48/133 (36.09%), Postives = 81/133 (60.90%), Query Frame = 0


Query: 44  EVAFRHLDIDGDGKISGDELRSYFASIGEYMTWDGAQSVIGDFDKDGDELLELGDFERLV 103
           E  F ++D + DG+IS +EL+  F ++GE ++ + A + +   D DGD +L+  +F +L+
Sbjct: 45  EAVFSYMDANRDGRISPEELQKSFMTLGEQLSDEEAVAAVRLSDTDGDGMLDFEEFSQLI 104

Query: 104 K-GEEEEQEEDLKRAFEMFEGEKGCGFIGATGLQKMFGRLGYVKSKEDCMTMIKVFDVDG 163
           K  +EEE++ +LK AF ++  E G   I    L+ M  +LG  ++ +DC  MI  FD++ 
Sbjct: 105 KVDDEEEKKMELKGAFRLYIAE-GEDCITPRSLKMMLKKLGESRTTDDCRVMISAFDLNA 164

Query: 164 DGVIDYHEFLRMM 176
           DGV+ + EF  MM
Sbjct: 165 DGVLSFDEFALMM 176

[Close]

BLAST of MELO3C003889.2 vs. Swiss-Prot
Match: sp|Q8RYJ8|CML19_ORYSJ (Putative calcium-binding protein CML19 OS=Oryza sativa subsp. japonica OX=39947 GN=CML19 PE=3 SV=1)

HSP 1 Score: 88.2 bits (217), Expect = 9.9e-17
Identity = 57/134 (42.54%), Postives = 78/134 (58.21%), Query Frame = 0


Query: 47  FRHLDIDGDGKISGDELRSYF-ASIGEYMTWDGAQSVIGDFDKDGDELLELGDFERLV-- 106
           F   D D DGKIS  ELR    A++GE M+ + A++++   D D D LL+  +F +L   
Sbjct: 12  FSAFDRDADGKISAAELRLCMKAALGEDMSAEEAEALVSSADTDDDGLLDEEEFTKLAVQ 71

Query: 107 --KGEEEEQEEDLKRAFEMFEGEKGCGFIGATGLQKMFGRLGYVKSKEDCMTMIKVFDVD 166
              G+EEE+   L  AF M+E E G G I    L++M  +LG  +  E+C TMI  FD+D
Sbjct: 72  LEMGDEEERCRGLMEAFRMYEME-GEGRITPASLKRMLSKLGSHQGIEECQTMICRFDLD 131

Query: 167 GDGVIDYHEFLRMM 176
           GDGVI + EF  MM
Sbjct: 132 GDGVISFEEFKIMM 144

[Close]

BLAST of MELO3C003889.2 vs. Swiss-Prot
Match: sp|Q9SU00|CML2_ARATH (Calmodulin-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=CML2 PE=2 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 1.3e-16
Identity = 48/133 (36.09%), Postives = 81/133 (60.90%), Query Frame = 0


Query: 47  FRHLDIDGDGKISGDELRSYFASIGEYMTWDGAQSVIGDFDKDGDELLELGDFERLVKG- 106
           F+  D +GDGKI+ +EL+ +F S+G  +  +    +I   D +GD  +++ +F  L +  
Sbjct: 10  FQMFDKNGDGKIAKNELKDFFKSVGIMVPENEINEMIAKMDVNGDGAMDIDEFGSLYQEM 69

Query: 107 -EEEEQEEDLKRAFEMFEGEKGCGFIGATGLQKMFGRLGYVKSK--EDCMTMIKVFDVDG 166
            EE+E+EED++ AF +F+ + G GFI    L+ +   +G  + +  EDC  MI   DVDG
Sbjct: 70  VEEKEEEEDMREAFRVFD-QNGDGFITDEELRSVLASMGLKQGRTLEDCKKMISKVDVDG 129

Query: 167 DGVIDYHEFLRMM 176
           DG++++ EF +MM
Sbjct: 130 DGMVNFKEFKQMM 141

[Close]

BLAST of MELO3C003889.2 vs. TrEMBL
Match: tr|A0A1S3CT00|A0A1S3CT00_CUCME (probable calcium-binding protein CML41 OS=Cucumis melo OX=3656 GN=LOC103503982 PE=4 SV=1)

HSP 1 Score: 362.5 bits (929), Expect = 5.5e-97
Identity = 176/176 (100.00%), Postives = 176/176 (100.00%), Query Frame = 0


Query: 1   MAISTIAIPFKWFTKTNFKLNFPLLHSKHKPISSKPPTPPPLAEVAFRHLDIDGDGKISG 60
           MAISTIAIPFKWFTKTNFKLNFPLLHSKHKPISSKPPTPPPLAEVAFRHLDIDGDGKISG
Sbjct: 1   MAISTIAIPFKWFTKTNFKLNFPLLHSKHKPISSKPPTPPPLAEVAFRHLDIDGDGKISG 60

Query: 61  DELRSYFASIGEYMTWDGAQSVIGDFDKDGDELLELGDFERLVKGEEEEQEEDLKRAFEM 120
           DELRSYFASIGEYMTWDGAQSVIGDFDKDGDELLELGDFERLVKGEEEEQEEDLKRAFEM
Sbjct: 61  DELRSYFASIGEYMTWDGAQSVIGDFDKDGDELLELGDFERLVKGEEEEQEEDLKRAFEM 120

Query: 121 FEGEKGCGFIGATGLQKMFGRLGYVKSKEDCMTMIKVFDVDGDGVIDYHEFLRMMT 177
           FEGEKGCGFIGATGLQKMFGRLGYVKSKEDCMTMIKVFDVDGDGVIDYHEFLRMMT
Sbjct: 121 FEGEKGCGFIGATGLQKMFGRLGYVKSKEDCMTMIKVFDVDGDGVIDYHEFLRMMT 176

[Close]

BLAST of MELO3C003889.2 vs. TrEMBL
Match: tr|A0A0A0LG17|A0A0A0LG17_CUCSA (Calmodulin OS=Cucumis sativus OX=3659 GN=Csa_3G854250 PE=4 SV=1)

HSP 1 Score: 314.3 bits (804), Expect = 1.7e-82
Identity = 159/181 (87.85%), Postives = 168/181 (92.82%), Query Frame = 0


Query: 1   MAISTIA-IPFKWFTKTNFKLNFPLLHSKHKPISSKP----PTPPPLAEVAFRHLDIDGD 60
           MAIS+IA IPFKWFTKTNFKLNFPLLHSKHKP SSKP    P P PLAEVAFRHLD+DGD
Sbjct: 1   MAISSIAVIPFKWFTKTNFKLNFPLLHSKHKPTSSKPSTSGPGPRPLAEVAFRHLDVDGD 60

Query: 61  GKISGDELRSYFASIGEYMTWDGAQSVIGDFDKDGDELLELGDFERLVKGEEEEQEEDLK 120
           GKIS +EL+SYFASIGEYMTW+ A+SVIGDFD+DGDELLELGDFER+VKGEEEE EEDLK
Sbjct: 61  GKISCNELQSYFASIGEYMTWNDARSVIGDFDRDGDELLELGDFERMVKGEEEE-EEDLK 120

Query: 121 RAFEMFEGEKGCGFIGATGLQKMFGRLGYVKSKEDCMTMIKVFDVDGDGVIDYHEFLRMM 177
           RAFEMFEGEKGCGFI ATGLQKMFGRLGYVKSKE+CM MIKVFDVDGDGVIDYHEFLRMM
Sbjct: 121 RAFEMFEGEKGCGFIEATGLQKMFGRLGYVKSKEECMAMIKVFDVDGDGVIDYHEFLRMM 180

[Close]

BLAST of MELO3C003889.2 vs. TrEMBL
Match: tr|A0A061FDC7|A0A061FDC7_THECC (Calmodulin-like 41, putative OS=Theobroma cacao OX=3641 GN=TCM_033977 PE=4 SV=1)

HSP 1 Score: 181.0 bits (458), Expect = 2.3e-42
Identity = 96/187 (51.34%), Postives = 128/187 (68.45%), Query Frame = 0


Query: 1   MAISTIAIPFKWFTKTNFKLNFPLLHSKHKPISS-------KPPTP-----PPLAEVAFR 60
           M I++I+ P KWF+  + +L+FP L SK K  SS       +PPTP         +V FR
Sbjct: 1   MEIASISKPIKWFSNKSLRLSFPRLRSKSKSSSSLPSPTVIRPPTPNISTKEEDLQVVFR 60

Query: 61  HLDIDGDGKISGDELRSYFASIGEYMTWDGAQSVIGDFDKDGDELLELGDFERLVKGEEE 120
             D DGDGKIS +EL +YFASIG+Y++   AQ VI DFD +GD  LE  DF +L++G   
Sbjct: 61  RFDSDGDGKISSEELSAYFASIGDYVSRQEAQRVIKDFDNNGDNRLEFNDFVKLMEG-GN 120

Query: 121 EQEEDLKRAFEMFEGEKGCGFIGATGLQKMFGRLGYVKSKEDCMTMIKVFDVDGDGVIDY 176
           E ++D+KRAFEM+E +KGCG I   GLQ+M  RLG VKS E+C+ MI+VFD+DG+GV+D+
Sbjct: 121 EGDDDIKRAFEMYEVDKGCGCITPVGLQQMLNRLGDVKSYEECVAMIRVFDLDGNGVLDF 180

[Close]

BLAST of MELO3C003889.2 vs. TrEMBL
Match: tr|A0A1U7YSQ0|A0A1U7YSQ0_NELNU (probable calcium-binding protein CML41 OS=Nelumbo nucifera OX=4432 GN=LOC104587385 PE=4 SV=1)

HSP 1 Score: 169.9 bits (429), Expect = 5.3e-39
Identity = 96/193 (49.74%), Postives = 123/193 (63.73%), Query Frame = 0


Query: 1   MAISTIAIPFKWFTKTNFKLNFPLLH--SKHKPISSKPPTPPPLAEV------------- 60
           MA   I  P KWF+  +FKLN P LH     +  SS+   PPPLA++             
Sbjct: 1   MATLGIPKPSKWFSSKSFKLNLPRLHPPKTDRDNSSRSTPPPPLAQLTPKGSTREDQFQK 60

Query: 61  AFRHLDIDGDGKISGDELRSYFASIGEYMTWDGAQSVIGDFDKDGDELLELGDFERLVKG 120
            FR+LD DGDGKIS  E+R+YF SIGE M+   A+ VI D D DGD LL+  DF RL+  
Sbjct: 61  VFRYLDSDGDGKISSYEIRAYFGSIGENMSRHRAEEVISDLDSDGDNLLDFADFVRLM-- 120

Query: 121 EEEEQEEDLKRAFEMFEGEKGCGFIGATGLQKMFGRLGY--VKSKEDCMTMIKVFDVDGD 177
            E + E+DLK+AF+MF+ E+G G I   GLQ+MF RLG    KS +DC+ MIK+FD+DG+
Sbjct: 121 -ERDGEDDLKQAFDMFQVEEGAGCITPLGLQRMFTRLGLGDSKSYDDCVAMIKIFDLDGN 180

[Close]

BLAST of MELO3C003889.2 vs. TrEMBL
Match: tr|W9S3N7|W9S3N7_9ROSA (Putative calcium-binding protein CML41 OS=Morus notabilis OX=981085 GN=L484_021227 PE=4 SV=1)

HSP 1 Score: 167.9 bits (424), Expect = 2.0e-38
Identity = 86/172 (50.00%), Postives = 115/172 (66.86%), Query Frame = 0


Query: 11  KWFTKTNFKLNFPLLHSKHKPISSKPPTPPPLAEV------AFRHLDIDGDGKISGDELR 70
           KWF  +NFKL  P   SK KP    P T   +  +       FRH D +GDGKIS +EL 
Sbjct: 15  KWFAPSNFKLVLPHFGSKSKP--QVPSTATKIRSIQEDYQKVFRHFDANGDGKISSEELC 74

Query: 71  SYFASIGEYMTWDGAQSVIGDFDKDGDELLELGDFERLVKGEEEEQEEDLKRAFEMFEGE 130
           +YFASIG+ M+ + AQ  + +FD +GD  L   DF RL++ ++ E  +DLKRAF+MFE +
Sbjct: 75  TYFASIGDSMSSEEAQIAVTEFDGNGDNFLAFKDFVRLMERDQGEANDDLKRAFQMFEAD 134

Query: 131 KGCGFIGATGLQKMFGRLGYVKSKEDCMTMIKVFDVDGDGVIDYHEFLRMMT 177
           KGCG I   GLQ+M  RLG  KS ++C++MI+VFD+DG+GV+D+HEFL MMT
Sbjct: 135 KGCGCITPKGLQRMLNRLGDAKSYQECISMIRVFDLDGNGVLDFHEFLHMMT 184

The following BLAST results are available for this feature:

BLAST of MELO3C003889.2 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008466624.1	8.3e-97	100.00	PREDICTED: probable calcium-binding protein CML41 [Cucumis melo]	[more]
XP_004147818.1	2.6e-82	87.85	PREDICTED: probable calcium-binding protein CML41 [Cucumis sativus] >KGN59929.1 ...	[more]
XP_022974919.1	2.6e-66	72.83	probable calcium-binding protein CML41 [Cucurbita maxima]	[more]
XP_023535419.1	2.6e-66	72.28	calmodulin-like protein 2 [Cucurbita pepo subsp. pepo]	[more]
XP_022936314.1	1.7e-65	72.13	probable calcium-binding protein CML41 [Cucurbita moschata]	[more]

BLAST of MELO3C003889.2 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G50770.1	4.8e-30	39.90	calmodulin-like 41	[more]
AT1G76640.1	5.0e-19	36.76	Calcium-binding EF-hand family protein	[more]
AT1G76650.1	4.2e-18	36.09	calmodulin-like 38	[more]
AT4G12860.1	7.2e-18	36.09	EF hand calcium-binding protein family	[more]
AT5G42380.1	3.6e-17	37.31	calmodulin like 37	[more]

BLAST of MELO3C003889.2 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q8L3R2\|CML41_ARATH	8.7e-29	39.90	Probable calcium-binding protein CML41 OS=Arabidopsis thaliana OX=3702 GN=CML41 ...	[more]
sp\|Q9SRE7\|CML39_ARATH	9.0e-18	36.76	Calcium-binding protein CML39 OS=Arabidopsis thaliana OX=3702 GN=CML39 PE=2 SV=1	[more]
sp\|Q9SRE6\|CML38_ARATH	7.6e-17	36.09	Calcium-binding protein CML38 OS=Arabidopsis thaliana OX=3702 GN=CML38 PE=2 SV=1	[more]
sp\|Q8RYJ8\|CML19_ORYSJ	9.9e-17	42.54	Putative calcium-binding protein CML19 OS=Oryza sativa subsp. japonica OX=39947 ...	[more]
sp\|Q9SU00\|CML2_ARATH	1.3e-16	36.09	Calmodulin-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=CML2 PE=2 SV=1	[more]

BLAST of MELO3C003889.2 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3CT00\|A0A1S3CT00_CUCME	5.5e-97	100.00	probable calcium-binding protein CML41 OS=Cucumis melo OX=3656 GN=LOC103503982 P...	[more]
tr\|A0A0A0LG17\|A0A0A0LG17_CUCSA	1.7e-82	87.85	Calmodulin OS=Cucumis sativus OX=3659 GN=Csa_3G854250 PE=4 SV=1	[more]
tr\|A0A061FDC7\|A0A061FDC7_THECC	2.3e-42	51.34	Calmodulin-like 41, putative OS=Theobroma cacao OX=3641 GN=TCM_033977 PE=4 SV=1	[more]
tr\|A0A1U7YSQ0\|A0A1U7YSQ0_NELNU	5.3e-39	49.74	probable calcium-binding protein CML41 OS=Nelumbo nucifera OX=4432 GN=LOC1045873...	[more]
tr\|W9S3N7\|W9S3N7_9ROSA	2.0e-38	50.00	Putative calcium-binding protein CML41 OS=Morus notabilis OX=981085 GN=L484_0212...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005509	calcium ion binding

Vocabulary: **INTERPRO**
Term	Definition
IPR011992	EF-hand-dom_pair
IPR018247	EF_Hand_1_Ca_BS
IPR002048	EF_hand_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005509	calcium ion binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C003889.2.1	MELO3C003889.2.1	mRNA

InterPro

Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002048	EF-hand domain	SMART	SM00054	efh_1	coord: 78..106 e-value: 15.0 score: 8.2 coord: 42..70 e-value: 0.0012 score: 28.1 coord: 150..176 e-value: 0.2 score: 20.7
IPR002048	EF-hand domain	PFAM	PF13499	EF-hand_7	coord: 46..103 e-value: 3.6E-8 score: 33.7
IPR002048	EF-hand domain	PFAM	PF13833	EF-hand_8	coord: 128..175 e-value: 2.9E-8 score: 33.2
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 38..73 score: 12.644
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 146..176 score: 15.406
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 74..109 score: 7.177
IPR002048	EF-hand domain	CDD	cd00051	EFh	coord: 43..104 e-value: 2.11254E-10 score: 52.1649
IPR002048	EF-hand domain	CDD	cd00051	EFh	coord: 113..176 e-value: 3.75832E-10 score: 51.7797
None	No IPR available	GENE3D	G3DSA:1.10.238.10		coord: 107..176 e-value: 7.3E-17 score: 63.3
None	No IPR available	GENE3D	G3DSA:1.10.238.10		coord: 42..106 e-value: 1.9E-12 score: 48.7
None	No IPR available	PANTHER	PTHR43996	FAMILY NOT NAMED	coord: 46..176
None	No IPR available	PANTHER	PTHR43996:SF10	CALCIUM-BINDING PROTEIN CML41-RELATED	coord: 46..176
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 51..63
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 159..171
IPR011992	EF-hand domain pair	SUPERFAMILY	SSF47473	EF-hand	coord: 46..176

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
MELO3C003889.2	Csa3G854250	Cucumber (Chinese Long) v2	cumedB208
MELO3C003889.2	CSPI03G42430	Wild cucumber (PI 183967)	cpimedB209
MELO3C003889.2	Cucsa.342090	Cucumber (Gy14) v1	cgymedB560
MELO3C003889.2	CmaCh09G001770	Cucurbita maxima (Rimu)	cmamedB031
MELO3C003889.2	CmoCh09G001730	Cucurbita moschata (Rifu)	cmomedB020
MELO3C003889.2	Lsi04G016350	Bottle gourd (USVL1VR-Ls)	lsimedB325
MELO3C003889.2	Cp4.1LG06g01250	Cucurbita pepo (Zucchini)	cpemedB859
MELO3C003889.2	CsGy3G039950	Cucumber (Gy14) v2	cgybmedB186
MELO3C003889.2	Cla020738	Watermelon (97103) v1	medwmB364
MELO3C003889.2	ClCG05G019230	Watermelon (Charleston Gray)	medwcgB325
MELO3C003889.2	Cla97C05G100760	Watermelon (97103) v2	medwmbB319
MELO3C003889.2	Bhi11G002149	Wax gourd	medwgoB386
MELO3C003889.2	Carg08742	Silver-seed gourd	carmedB0108
MELO3C003889.2	CsaV3_3G044850	Cucumber (Chinese Long) v3	cucmedB212

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C003889.2	Silver-seed gourd	carmedB0934
MELO3C003889.2	Cucurbita maxima (Rimu)	cmamedB487
MELO3C003889.2	Cucurbita moschata (Rifu)	cmomedB474
MELO3C003889.2	Cucurbita pepo (Zucchini)	cpemedB614