CmoCh08G012310 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh08G012310
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
Description(MYB-IF25 transcription factor) (R2R3 Myb transcription factor MYB-IF25)
LocationCmo_Chr08 : 7796804 .. 7798610 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
AGAGAGAGAATTTAGAGAGAGAGAGAGAATTTAGAGAGAGAGAGAGTGATCTTCCATTAACAAAGCAGGTTGTGAAGGAAGATGTGCGAGTCTATATAAGGCGTTGAGAGACAATTCATCTGATCTCTTTCAGGCAAGTGTCTGTTCATGAGGATGGGGAGAACACCGTGCTGTGAGAAGGAAGGGCTGAGAAGAGGCCGCTGGACGGCGGTGGAAGACAATAAACTGAAGAAGTATATCGAAGCGAACGGAGAAGGTTCGTGGAGATTGTTGCCGAAGAATGCTGGTGAGATTGATTTCGATTTGATATTTGTTTTTGTTTTTGTTTTTTTTTTGTGCGATTAAGTACTGCGATTCTTCTGGTTCTGTCTGAGATTTTGAATTGATTTGGCTTCTTCTGGTTCTGTCTATGATTACGAATTGGTCCTGAATGTGTGTGTGAAAATTTAGGACTGTTGAGATGTGGAAAGAGTTGCAGGTTGCGATGGATTAATTACTTGAGAGCGGATTTGAAGAGAGGGAATATCACTCAACAAGAAGATGAAACTATTCTCAAATTGCACACGACTTTCGGCAATCGGTTCGTTTCTCTCTCCTTTTTTTTTTCTTCTTCTCACAATTAAGATTGATAGCGAGGAAGCATGGAAGCATTGCAGTTTTCAAACATATTTTTACACCTTGATTTCAAACATAGTTTTCCACTTTAATTTCTAACATAATTTTACTCCTCGATAATAAAGTTCAATCGGAGTATAGAATCTCAAATAAACGCAATTTGTATGAGTAAATCACCATTTGAAGCTTCACAACTGACCTCGTGTTTTGTTATTCTCTTCTTCTTCTTGATCATCACAATCATTTTATAGCACATTTGAAATTTTAATTAATTTATTTTTTTTGTATTCTCATCTTTTGTGATTTTATTTCTTTTCCTCTTGTAATTTTCATTTTAAGCTCCACAATTGACTCCTGCTGTGTTATTCTTGTCTACATCATTCTTTTCCTCATCCTCATAATGATTTTCTGTTTGGCACGTTCGAACTTTTATTTTTATTTTATTTTTTCTCCTTTTCTGATTTTCTCGCCTTTTTTTTTTCCTTTTAATTTCATTTGATGCTTCTCCAACGGACTTCGGCTTTGTGTTCTTGTCCACATCGTTCTCTTCTTGATCATCACAATCCTTTTTTCGTCTTTTCTTTTCTTTTTAATTTCATTTGATGCTTCTCCTAGTGACTTCGGCTCTGTGTTCTTGTCCACATCGTTCTCTTCTTGATCATCACAATCCTTTTTTTCATCTTTTTTTTTCCTTTTAATTTCATTTGATGCTTATCCAACTGACTTCGGCTTTGTGTTCTTGTCCGCATCGTTCTCTTGTTGATCATCACAATCCTTTTTTCGTTTTTTTTTTCCTTTTAATTTCATTTGAAGCTTCTCCAACTGACTTCGGCTTTGTGTTCTTGTCCACATCATTCTCTTGTTGATCATCACAATCCTTTTTTCGTCTTTTTTTTTTCCTTTTAATTTCATTTGATGCTTCTCCAACTGACTTCGGCTGTGTTCTTGTTCACATCGTTCTCTTCTTGATCATCACAATCCTTTTTTCGTCTTTTTTTTTTCCTTTTAATTTCATTTGATGCTTCTCCAACTGACTTCGCTTTTTATTCTCGTCCACATCGTTCTCTTCTTGATCATCACAATCCTTTTCTTTGAGCACATTTGAACTTTTTATTTATTACTTTTTTCTTTATCATTGTGATTTCATAATATTTTTATGTATACTAAATCCAGATTAATGACTAACACATAG

mRNA sequence

AGAGAGAGAATTTAGAGAGAGAGAGAGAATTTAGAGAGAGAGAGAGTGATCTTCCATTAACAAAGCAGGTTGTGAAGGAAGATGTGCGAGTCTATATAAGGCGTTGAGAGACAATTCATCTGATCTCTTTCAGGCAAGTGTCTGTTCATGAGGATGGGGAGAACACCGTGCTGTGAGAAGGAAGGGCTGAGAAGAGGCCGCTGGACGGCGGTGGAAGACAATAAACTGAAGAAGTATATCGAAGCGAACGGAGAAGGTTCGTGGAGATTGTTGCCGAAGAATGCTGGACTGTTGAGATGTGGAAAGAGTTGCAGGTTGCGATGGATTAATTACTTGAGAGCGGATTTGAAGAGAGGGAATATCACTCAACAAGAAGATGAAACTATTCTCAAATTGCACACGACTTTCGGCAATCGATTAATGACTAACACATAG

Coding sequence (CDS)

ATGAGGATGGGGAGAACACCGTGCTGTGAGAAGGAAGGGCTGAGAAGAGGCCGCTGGACGGCGGTGGAAGACAATAAACTGAAGAAGTATATCGAAGCGAACGGAGAAGGTTCGTGGAGATTGTTGCCGAAGAATGCTGGACTGTTGAGATGTGGAAAGAGTTGCAGGTTGCGATGGATTAATTACTTGAGAGCGGATTTGAAGAGAGGGAATATCACTCAACAAGAAGATGAAACTATTCTCAAATTGCACACGACTTTCGGCAATCGATTAATGACTAACACATAG
Homology
[Close]
BLAST of CmoCh08G012310 vs. Swiss-Prot
Match: MYB12_ARATH (Transcription factor MYB12 OS=Arabidopsis thaliana GN=MYB12 PE=2 SV=1)

HSP 1 Score: 151.8 bits (382), Expect = 3.9e-36
Identity = 66/88 (75.00%), Postives = 76/88 (86.36%), Query Frame = 1 

Query: 3  MGRTPCCEKEGLRRGRWTAVEDNKLKKYIEANGEGSWRLLPKNAGLLRCGKSCRLRWINY 62
          MGR PCCEK G++RGRWTA ED  L  YI++NGEGSWR LPKNAGL RCGKSCRLRWINY
Sbjct: 1  MGRAPCCEKVGIKRGRWTAEEDQILSNYIQSNGEGSWRSLPKNAGLKRCGKSCRLRWINY 60

Query: 63 LRADLKRGNITQQEDETILKLHTTFGNR 91
          LR+DLKRGNIT +E+E ++KLH+T GNR
Sbjct: 61 LRSDLKRGNITPEEEELVVKLHSTLGNR 88

[Close]
BLAST of CmoCh08G012310 vs. Swiss-Prot
Match: MYBP_MAIZE (Myb-related protein P OS=Zea mays GN=P PE=2 SV=1)

HSP 1 Score: 151.4 bits (381), Expect = 5.1e-36
Identity = 67/88 (76.14%), Postives = 76/88 (86.36%), Query Frame = 1 

Query: 3  MGRTPCCEKEGLRRGRWTAVEDNKLKKYIEANGEGSWRLLPKNAGLLRCGKSCRLRWINY 62
          MGRTPCCEK GL+RGRWTA ED  L  YI  +GEGSWR LPKNAGLLRCGKSCRLRWINY
Sbjct: 1  MGRTPCCEKVGLKRGRWTAEEDQLLANYIAEHGEGSWRSLPKNAGLLRCGKSCRLRWINY 60

Query: 63 LRADLKRGNITQQEDETILKLHTTFGNR 91
          LRAD+KRGNI+++E++ I+KLH T GNR
Sbjct: 61 LRADVKRGNISKEEEDIIIKLHATLGNR 88

[Close]
BLAST of CmoCh08G012310 vs. Swiss-Prot
Match: MYB4_ARATH (Transcription repressor MYB4 OS=Arabidopsis thaliana GN=MYB4 PE=1 SV=1)

HSP 1 Score: 136.7 bits (343), Expect = 1.3e-31
Identity = 60/88 (68.18%), Postives = 70/88 (79.55%), Query Frame = 1 

Query: 3  MGRTPCCEKEGLRRGRWTAVEDNKLKKYIEANGEGSWRLLPKNAGLLRCGKSCRLRWINY 62
          MGR+PCCEK    +G WT  ED +L  YI+A+GEG WR LPK AGLLRCGKSCRLRWINY
Sbjct: 1  MGRSPCCEKAHTNKGAWTKEEDERLVAYIKAHGEGCWRSLPKAAGLLRCGKSCRLRWINY 60

Query: 63 LRADLKRGNITQQEDETILKLHTTFGNR 91
          LR DLKRGN T++EDE I+KLH+  GN+
Sbjct: 61 LRPDLKRGNFTEEEDELIIKLHSLLGNK 88

[Close]
BLAST of CmoCh08G012310 vs. Swiss-Prot
Match: MYB08_ANTMA (Myb-related protein 308 OS=Antirrhinum majus GN=MYB308 PE=2 SV=1)

HSP 1 Score: 136.7 bits (343), Expect = 1.3e-31
Identity = 60/88 (68.18%), Postives = 70/88 (79.55%), Query Frame = 1 

Query: 3  MGRTPCCEKEGLRRGRWTAVEDNKLKKYIEANGEGSWRLLPKNAGLLRCGKSCRLRWINY 62
          MGR+PCCEK    +G WT  ED++L  YI A+GEG WR LPK AGLLRCGKSCRLRWINY
Sbjct: 1  MGRSPCCEKAHTNKGAWTKEEDDRLVAYIRAHGEGCWRSLPKAAGLLRCGKSCRLRWINY 60

Query: 63 LRADLKRGNITQQEDETILKLHTTFGNR 91
          LR DLKRGN T++EDE I+KLH+  GN+
Sbjct: 61 LRPDLKRGNFTEEEDELIIKLHSLLGNK 88

[Close]
BLAST of CmoCh08G012310 vs. Swiss-Prot
Match: MYB30_ANTMA (Myb-related protein 330 OS=Antirrhinum majus GN=MYB330 PE=2 SV=1)

HSP 1 Score: 136.3 bits (342), Expect = 1.7e-31
Identity = 60/88 (68.18%), Postives = 69/88 (78.41%), Query Frame = 1 

Query: 3  MGRTPCCEKEGLRRGRWTAVEDNKLKKYIEANGEGSWRLLPKNAGLLRCGKSCRLRWINY 62
          MGR+PCCEK    +G WT  ED +L  YI A+GEG WR LPK AGLLRCGKSCRLRWINY
Sbjct: 1  MGRSPCCEKAHTNKGAWTKEEDQRLINYIRAHGEGCWRSLPKAAGLLRCGKSCRLRWINY 60

Query: 63 LRADLKRGNITQQEDETILKLHTTFGNR 91
          LR DLKRGN T++EDE I+KLH+  GN+
Sbjct: 61 LRPDLKRGNFTEEEDEIIIKLHSLLGNK 88

[Close]
BLAST of CmoCh08G012310 vs. TrEMBL
Match: A0A0A0KCZ1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G311520 PE=4 SV=1)

HSP 1 Score: 176.4 bits (446), Expect = 1.6e-41
Identity = 81/88 (92.05%), Postives = 83/88 (94.32%), Query Frame = 1 

Query: 3  MGRTPCCEKEGLRRGRWTAVEDNKLKKYIEANGEGSWRLLPKNAGLLRCGKSCRLRWINY 62
          MGRTPCCEKEGLRRGRWTA ED+KLKKYIEANGEGSWR LPKNAGLLRCGKSCRLRWINY
Sbjct: 1  MGRTPCCEKEGLRRGRWTAEEDDKLKKYIEANGEGSWRSLPKNAGLLRCGKSCRLRWINY 60

Query: 63 LRADLKRGNITQQEDETILKLHTTFGNR 91
          LR DLKRGNI+ QEDETILKLHTT GNR
Sbjct: 61 LRTDLKRGNISPQEDETILKLHTTLGNR 88

[Close]
BLAST of CmoCh08G012310 vs. TrEMBL
Match: A0A067K7L3_JATCU (MYB family protein OS=Jatropha curcas GN=JCGZ_14006 PE=4 SV=1)

HSP 1 Score: 162.2 bits (409), Expect = 3.2e-37
Identity = 74/88 (84.09%), Postives = 77/88 (87.50%), Query Frame = 1 

Query: 3  MGRTPCCEKEGLRRGRWTAVEDNKLKKYIEANGEGSWRLLPKNAGLLRCGKSCRLRWINY 62
          MGR PCCEK GL+RGRWTA ED KL KYIEANGEGSWR LPKNAGLLRCGKSCRLRWINY
Sbjct: 1  MGRAPCCEKVGLKRGRWTAEEDEKLTKYIEANGEGSWRSLPKNAGLLRCGKSCRLRWINY 60

Query: 63 LRADLKRGNITQQEDETILKLHTTFGNR 91
          LRADLKRGNIT QE+E I KLH + GNR
Sbjct: 61 LRADLKRGNITPQEEEIIFKLHASLGNR 88

[Close]
BLAST of CmoCh08G012310 vs. TrEMBL
Match: D5FFI0_MEDTR (MYB transcription factor MYB112 OS=Medicago truncatula PE=2 SV=1)

HSP 1 Score: 161.0 bits (406), Expect = 7.1e-37
Identity = 72/88 (81.82%), Postives = 79/88 (89.77%), Query Frame = 1 

Query: 3  MGRTPCCEKEGLRRGRWTAVEDNKLKKYIEANGEGSWRLLPKNAGLLRCGKSCRLRWINY 62
          MGRTPCC K GL+RGRWTA ED  L KYI+ANGEGSWR LPKNAGLLRCGKSCRLRWINY
Sbjct: 1  MGRTPCCAKVGLKRGRWTAEEDEILSKYIQANGEGSWRSLPKNAGLLRCGKSCRLRWINY 60

Query: 63 LRADLKRGNITQQEDETILKLHTTFGNR 91
          LR DLKRGNI+ QE++TI+KLHTT+GNR
Sbjct: 61 LRTDLKRGNISAQEEDTIVKLHTTYGNR 88

[Close]
BLAST of CmoCh08G012310 vs. TrEMBL
Match: B9RZL8_RICCO (R2r3-myb transcription factor, putative OS=Ricinus communis GN=RCOM_0999660 PE=4 SV=1)

HSP 1 Score: 160.2 bits (404), Expect = 1.2e-36
Identity = 73/88 (82.95%), Postives = 78/88 (88.64%), Query Frame = 1 

Query: 3  MGRTPCCEKEGLRRGRWTAVEDNKLKKYIEANGEGSWRLLPKNAGLLRCGKSCRLRWINY 62
          MGR PCCEK GL++GRWTA ED  L KYI ANGEGSWR LPKNAGLLRCGKSCRLRWINY
Sbjct: 1  MGRAPCCEKVGLKKGRWTAEEDEILTKYILANGEGSWRSLPKNAGLLRCGKSCRLRWINY 60

Query: 63 LRADLKRGNITQQEDETILKLHTTFGNR 91
          LRADLKRGNIT++EDETI+KLHT  GNR
Sbjct: 61 LRADLKRGNITKEEDETIVKLHTALGNR 88

[Close]
BLAST of CmoCh08G012310 vs. TrEMBL
Match: B9HWW8_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0010s15090g PE=4 SV=2)

HSP 1 Score: 157.9 bits (398), Expect = 6.0e-36
Identity = 71/88 (80.68%), Postives = 78/88 (88.64%), Query Frame = 1 

Query: 3  MGRTPCCEKEGLRRGRWTAVEDNKLKKYIEANGEGSWRLLPKNAGLLRCGKSCRLRWINY 62
          MGR PCCEK GL++GRWTA ED  L KYI ANGEGSW+ LPKNAGLLRCGKSCRLRWINY
Sbjct: 1  MGRAPCCEKVGLKKGRWTAEEDEVLTKYILANGEGSWKSLPKNAGLLRCGKSCRLRWINY 60

Query: 63 LRADLKRGNITQQEDETILKLHTTFGNR 91
          LRADLKRGNIT++E+ETI+KLHT  GNR
Sbjct: 61 LRADLKRGNITKEEEETIVKLHTALGNR 88

[Close]
BLAST of CmoCh08G012310 vs. TAIR10
Match: AT2G47460.1 (AT2G47460.1 myb domain protein 12)

HSP 1 Score: 151.8 bits (382), Expect = 2.2e-37
Identity = 66/88 (75.00%), Postives = 76/88 (86.36%), Query Frame = 1 

Query: 3  MGRTPCCEKEGLRRGRWTAVEDNKLKKYIEANGEGSWRLLPKNAGLLRCGKSCRLRWINY 62
          MGR PCCEK G++RGRWTA ED  L  YI++NGEGSWR LPKNAGL RCGKSCRLRWINY
Sbjct: 1  MGRAPCCEKVGIKRGRWTAEEDQILSNYIQSNGEGSWRSLPKNAGLKRCGKSCRLRWINY 60

Query: 63 LRADLKRGNITQQEDETILKLHTTFGNR 91
          LR+DLKRGNIT +E+E ++KLH+T GNR
Sbjct: 61 LRSDLKRGNITPEEEELVVKLHSTLGNR 88

[Close]
BLAST of CmoCh08G012310 vs. TAIR10
Match: AT5G49330.1 (AT5G49330.1 myb domain protein 111)

HSP 1 Score: 150.2 bits (378), Expect = 6.4e-37
Identity = 68/88 (77.27%), Postives = 73/88 (82.95%), Query Frame = 1 

Query: 3  MGRTPCCEKEGLRRGRWTAVEDNKLKKYIEANGEGSWRLLPKNAGLLRCGKSCRLRWINY 62
          MGR PCCEK GL+RGRWTA ED  L KYI+ NGEGSWR LPK AGLLRCGKSCRLRWINY
Sbjct: 1  MGRAPCCEKIGLKRGRWTAEEDEILTKYIQTNGEGSWRSLPKKAGLLRCGKSCRLRWINY 60

Query: 63 LRADLKRGNITQQEDETILKLHTTFGNR 91
          LR DLKRGNIT  E+E I+KLH+  GNR
Sbjct: 61 LRRDLKRGNITSDEEEIIVKLHSLLGNR 88

[Close]
BLAST of CmoCh08G012310 vs. TAIR10
Match: AT3G62610.1 (AT3G62610.1 myb domain protein 11)

HSP 1 Score: 147.9 bits (372), Expect = 3.2e-36
Identity = 64/91 (70.33%), Postives = 76/91 (83.52%), Query Frame = 1 

Query: 3  MGRTPCCEKEGLRRGRWTAVEDNKLKKYIEANGEGSWRLLPKNAGLLRCGKSCRLRWINY 62
          MGR PCCEK G+++GRWTA ED  L  YI++NGEGSWR LPKNAGL RCGKSCRLRWINY
Sbjct: 1  MGRAPCCEKVGIKKGRWTAEEDRTLSDYIQSNGEGSWRSLPKNAGLKRCGKSCRLRWINY 60

Query: 63 LRADLKRGNITQQEDETILKLHTTFGNRLMT 94
          LR+D+KRGNIT +E++ I+KLH+T G R  T
Sbjct: 61 LRSDIKRGNITPEEEDVIVKLHSTLGTRWST 91

[Close]
BLAST of CmoCh08G012310 vs. TAIR10
Match: AT4G38620.1 (AT4G38620.1 myb domain protein 4)

HSP 1 Score: 136.7 bits (343), Expect = 7.3e-33
Identity = 60/88 (68.18%), Postives = 70/88 (79.55%), Query Frame = 1 

Query: 3  MGRTPCCEKEGLRRGRWTAVEDNKLKKYIEANGEGSWRLLPKNAGLLRCGKSCRLRWINY 62
          MGR+PCCEK    +G WT  ED +L  YI+A+GEG WR LPK AGLLRCGKSCRLRWINY
Sbjct: 1  MGRSPCCEKAHTNKGAWTKEEDERLVAYIKAHGEGCWRSLPKAAGLLRCGKSCRLRWINY 60

Query: 63 LRADLKRGNITQQEDETILKLHTTFGNR 91
          LR DLKRGN T++EDE I+KLH+  GN+
Sbjct: 61 LRPDLKRGNFTEEEDELIIKLHSLLGNK 88

[Close]
BLAST of CmoCh08G012310 vs. TAIR10
Match: AT2G16720.1 (AT2G16720.1 myb domain protein 7)

HSP 1 Score: 136.7 bits (343), Expect = 7.3e-33
Identity = 59/88 (67.05%), Postives = 70/88 (79.55%), Query Frame = 1 

Query: 3  MGRTPCCEKEGLRRGRWTAVEDNKLKKYIEANGEGSWRLLPKNAGLLRCGKSCRLRWINY 62
          MGR+PCCEKE + +G WT  ED +L  YI+++GEG WR LP+ AGLLRCGKSCRLRWINY
Sbjct: 1  MGRSPCCEKEHMNKGAWTKEEDERLVSYIKSHGEGCWRSLPRAAGLLRCGKSCRLRWINY 60

Query: 63 LRADLKRGNITQQEDETILKLHTTFGNR 91
          LR DLKRGN T  EDE I+KLH+  GN+
Sbjct: 61 LRPDLKRGNFTHDEDELIIKLHSLLGNK 88

[Close]
BLAST of CmoCh08G012310 vs. NCBI nr
Match: gi|659117020|ref|XP_008458382.1| (PREDICTED: myb-related protein Myb4-like [Cucumis melo])

HSP 1 Score: 177.9 bits (450), Expect = 8.1e-42
Identity = 82/88 (93.18%), Postives = 83/88 (94.32%), Query Frame = 1 

Query: 3  MGRTPCCEKEGLRRGRWTAVEDNKLKKYIEANGEGSWRLLPKNAGLLRCGKSCRLRWINY 62
          MGRTPCCEKEGLRRGRWTA ED+KLKKYIEANGEGSWR LPKNAGLLRCGKSCRLRWINY
Sbjct: 1  MGRTPCCEKEGLRRGRWTAEEDDKLKKYIEANGEGSWRSLPKNAGLLRCGKSCRLRWINY 60

Query: 63 LRADLKRGNITQQEDETILKLHTTFGNR 91
          LR DLKRGNIT QEDETILKLHTT GNR
Sbjct: 61 LRTDLKRGNITPQEDETILKLHTTLGNR 88

[Close]
BLAST of CmoCh08G012310 vs. NCBI nr
Match: gi|449464726|ref|XP_004150080.1| (PREDICTED: transcription repressor MYB6 [Cucumis sativus])

HSP 1 Score: 176.4 bits (446), Expect = 2.4e-41
Identity = 81/88 (92.05%), Postives = 83/88 (94.32%), Query Frame = 1 

Query: 3  MGRTPCCEKEGLRRGRWTAVEDNKLKKYIEANGEGSWRLLPKNAGLLRCGKSCRLRWINY 62
          MGRTPCCEKEGLRRGRWTA ED+KLKKYIEANGEGSWR LPKNAGLLRCGKSCRLRWINY
Sbjct: 1  MGRTPCCEKEGLRRGRWTAEEDDKLKKYIEANGEGSWRSLPKNAGLLRCGKSCRLRWINY 60

Query: 63 LRADLKRGNITQQEDETILKLHTTFGNR 91
          LR DLKRGNI+ QEDETILKLHTT GNR
Sbjct: 61 LRTDLKRGNISPQEDETILKLHTTLGNR 88

[Close]
BLAST of CmoCh08G012310 vs. NCBI nr
Match: gi|700192194|gb|KGN47398.1| (hypothetical protein Csa_6G311520 [Cucumis sativus])

HSP 1 Score: 176.4 bits (446), Expect = 2.4e-41
Identity = 81/88 (92.05%), Postives = 83/88 (94.32%), Query Frame = 1 

Query: 3  MGRTPCCEKEGLRRGRWTAVEDNKLKKYIEANGEGSWRLLPKNAGLLRCGKSCRLRWINY 62
          MGRTPCCEKEGLRRGRWTA ED+KLKKYIEANGEGSWR LPKNAGLLRCGKSCRLRWINY
Sbjct: 1  MGRTPCCEKEGLRRGRWTAEEDDKLKKYIEANGEGSWRSLPKNAGLLRCGKSCRLRWINY 60

Query: 63 LRADLKRGNITQQEDETILKLHTTFGNR 91
          LR DLKRGNI+ QEDETILKLHTT GNR
Sbjct: 61 LRTDLKRGNISPQEDETILKLHTTLGNR 88

[Close]
BLAST of CmoCh08G012310 vs. NCBI nr
Match: gi|802689561|ref|XP_012082867.1| (PREDICTED: myb-related protein P-like [Jatropha curcas])

HSP 1 Score: 162.2 bits (409), Expect = 4.6e-37
Identity = 74/88 (84.09%), Postives = 77/88 (87.50%), Query Frame = 1 

Query: 3  MGRTPCCEKEGLRRGRWTAVEDNKLKKYIEANGEGSWRLLPKNAGLLRCGKSCRLRWINY 62
          MGR PCCEK GL+RGRWTA ED KL KYIEANGEGSWR LPKNAGLLRCGKSCRLRWINY
Sbjct: 1  MGRAPCCEKVGLKRGRWTAEEDEKLTKYIEANGEGSWRSLPKNAGLLRCGKSCRLRWINY 60

Query: 63 LRADLKRGNITQQEDETILKLHTTFGNR 91
          LRADLKRGNIT QE+E I KLH + GNR
Sbjct: 61 LRADLKRGNITPQEEEIIFKLHASLGNR 88

[Close]
BLAST of CmoCh08G012310 vs. NCBI nr
Match: gi|149728070|gb|ABR28345.1| (MYB transcription factor MYB112 [Medicago truncatula])

HSP 1 Score: 161.0 bits (406), Expect = 1.0e-36
Identity = 72/88 (81.82%), Postives = 79/88 (89.77%), Query Frame = 1 

Query: 3  MGRTPCCEKEGLRRGRWTAVEDNKLKKYIEANGEGSWRLLPKNAGLLRCGKSCRLRWINY 62
          MGRTPCC K GL+RGRWTA ED  L KYI+ANGEGSWR LPKNAGLLRCGKSCRLRWINY
Sbjct: 1  MGRTPCCAKVGLKRGRWTAEEDEILSKYIQANGEGSWRSLPKNAGLLRCGKSCRLRWINY 60

Query: 63 LRADLKRGNITQQEDETILKLHTTFGNR 91
          LR DLKRGNI+ QE++TI+KLHTT+GNR
Sbjct: 61 LRTDLKRGNISAQEEDTIVKLHTTYGNR 88

The following BLAST results are available for this feature:
BLAST of CmoCh08G012310 vs. Swiss-Prot
Match NameE-valueIdentityDescription
MYB12_ARATH3.9e-3675.00Transcription factor MYB12 OS=Arabidopsis thaliana GN=MYB12 PE=2 SV=1[more]
MYBP_MAIZE5.1e-3676.14Myb-related protein P OS=Zea mays GN=P PE=2 SV=1[more]
MYB4_ARATH1.3e-3168.18Transcription repressor MYB4 OS=Arabidopsis thaliana GN=MYB4 PE=1 SV=1[more]
MYB08_ANTMA1.3e-3168.18Myb-related protein 308 OS=Antirrhinum majus GN=MYB308 PE=2 SV=1[more]
MYB30_ANTMA1.7e-3168.18Myb-related protein 330 OS=Antirrhinum majus GN=MYB330 PE=2 SV=1[more]
BLAST of CmoCh08G012310 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KCZ1_CUCSA1.6e-4192.05Uncharacterized protein OS=Cucumis sativus GN=Csa_6G311520 PE=4 SV=1[more]
A0A067K7L3_JATCU3.2e-3784.09MYB family protein OS=Jatropha curcas GN=JCGZ_14006 PE=4 SV=1[more]
D5FFI0_MEDTR7.1e-3781.82MYB transcription factor MYB112 OS=Medicago truncatula PE=2 SV=1[more]
B9RZL8_RICCO1.2e-3682.95R2r3-myb transcription factor, putative OS=Ricinus communis GN=RCOM_0999660 PE=4... [more]
B9HWW8_POPTR6.0e-3680.68Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0010s15090g PE=4 SV=2[more]
BLAST of CmoCh08G012310 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G47460.12.2e-3775.00 myb domain protein 12[more]
AT5G49330.16.4e-3777.27 myb domain protein 111[more]
AT3G62610.13.2e-3670.33 myb domain protein 11[more]
AT4G38620.17.3e-3368.18 myb domain protein 4[more]
AT2G16720.17.3e-3367.05 myb domain protein 7[more]
BLAST of CmoCh08G012310 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659117020|ref|XP_008458382.1|8.1e-4293.18PREDICTED: myb-related protein Myb4-like [Cucumis melo][more]
gi|449464726|ref|XP_004150080.1|2.4e-4192.05PREDICTED: transcription repressor MYB6 [Cucumis sativus][more]
gi|700192194|gb|KGN47398.1|2.4e-4192.05hypothetical protein Csa_6G311520 [Cucumis sativus][more]
gi|802689561|ref|XP_012082867.1|4.6e-3784.09PREDICTED: myb-related protein P-like [Jatropha curcas][more]
gi|149728070|gb|ABR28345.1|1.0e-3681.82MYB transcription factor MYB112 [Medicago truncatula][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001005SANT/Myb
IPR009057Homeobox-like_sf
IPR017930Myb_dom
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0051555 flavonol biosynthetic process
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0008150 biological_process
cellular_component GO:0005667 transcription factor complex
cellular_component GO:0005575 cellular_component
molecular_function GO:0003677 DNA binding
molecular_function GO:0003700 transcription factor activity, sequence-specific DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh08G012310.1CmoCh08G012310.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001005SANT/Myb domainPFAMPF00249Myb_DNA-bindingcoord: 16..63
score: 3.7
IPR001005SANT/Myb domainSMARTSM00717santcoord: 15..65
score: 8.4
IPR009057Homeodomain-likeGENE3DG3DSA:1.10.10.60coord: 67..90
score: 5.0E-8coord: 7..66
score: 1.1
IPR009057Homeodomain-likeunknownSSF46689Homeodomain-likecoord: 17..91
score: 6.84
IPR017930Myb domainPROFILEPS51294HTH_MYBcoord: 11..67
score: 20
NoneNo IPR availablePANTHERPTHR10641MYB-LIKE DNA-BINDING PROTEIN MYBcoord: 1..90
score: 8.7
NoneNo IPR availablePANTHERPTHR10641:SF595MYB TRANSCRIPTION FACTORcoord: 1..90
score: 8.7

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmoCh08G012310Csa6G311520Cucumber (Chinese Long) v2cmocuB891
CmoCh08G012310Csa3G165690Cucumber (Chinese Long) v2cmocuB872
CmoCh08G012310MELO3C006700Melon (DHL92) v3.5.1cmomeB832
CmoCh08G012310Lsi03G011010Bottle gourd (USVL1VR-Ls)cmolsiB818
CmoCh08G012310Cp4.1LG12g03120Cucurbita pepo (Zucchini)cmocpeB833
CmoCh08G012310Cla97C10G194150Watermelon (97103) v2cmowmbB882
CmoCh08G012310Bhi11G001051Wax gourdcmowgoB1083
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CmoCh08G012310CmoCh14G009510Cucurbita moschata (Rifu)cmocmoB232
CmoCh08G012310CmoCh14G016310Cucurbita moschata (Rifu)cmocmoB233
CmoCh08G012310CmoCh17G003460Cucurbita moschata (Rifu)cmocmoB310
The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh08G012310Watermelon (97103) v2cmowmbB896
CmoCh08G012310Watermelon (97103) v2cmowmbB887
CmoCh08G012310Wax gourdcmowgoB1085
CmoCh08G012310Wax gourdcmowgoB1104
CmoCh08G012310Cucumber (Gy14) v1cgycmoB0720
CmoCh08G012310Cucurbita maxima (Rimu)cmacmoB279
CmoCh08G012310Cucurbita maxima (Rimu)cmacmoB365
CmoCh08G012310Cucurbita maxima (Rimu)cmacmoB840
CmoCh08G012310Cucurbita maxima (Rimu)cmacmoB912
CmoCh08G012310Wild cucumber (PI 183967)cmocpiB883
CmoCh08G012310Wild cucumber (PI 183967)cmocpiB904
CmoCh08G012310Melon (DHL92) v3.5.1cmomeB800
CmoCh08G012310Watermelon (Charleston Gray)cmowcgB792
CmoCh08G012310Watermelon (Charleston Gray)cmowcgB799
CmoCh08G012310Watermelon (97103) v1cmowmB856
CmoCh08G012310Watermelon (97103) v1cmowmB867
CmoCh08G012310Cucurbita pepo (Zucchini)cmocpeB852
CmoCh08G012310Cucurbita pepo (Zucchini)cmocpeB862
CmoCh08G012310Cucurbita pepo (Zucchini)cmocpeB866
CmoCh08G012310Bottle gourd (USVL1VR-Ls)cmolsiB797
CmoCh08G012310Bottle gourd (USVL1VR-Ls)cmolsiB808
CmoCh08G012310Bottle gourd (USVL1VR-Ls)cmolsiB819
CmoCh08G012310Cucumber (Gy14) v2cgybcmoB255
CmoCh08G012310Cucumber (Gy14) v2cgybcmoB421
CmoCh08G012310Cucumber (Gy14) v2cgybcmoB855
CmoCh08G012310Melon (DHL92) v3.6.1cmomedB903
CmoCh08G012310Melon (DHL92) v3.6.1cmomedB940
CmoCh08G012310Silver-seed gourdcarcmoB0104
CmoCh08G012310Silver-seed gourdcarcmoB0391
CmoCh08G012310Silver-seed gourdcarcmoB0960
CmoCh08G012310Cucumber (Chinese Long) v3cmocucB1029
CmoCh08G012310Cucumber (Chinese Long) v3cmocucB1032
CmoCh08G012310Cucumber (Chinese Long) v3cmocucB1056