CmoCh08G010800 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh08G010800
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Sieve element occlusion protein 1
Location	Cmo_Chr08 : 6949029 .. 6949986 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

AACTAACCAAACCAAAATCATGTGTGCTTCATTTGCACCTCGTCCAAAGATCTCGGTCGTTCCATTGGCGCTCGCTCTAATGCAAAAAACAGACAAGGAACAGACGAATCTAAAGCACTTATCCGACGATGTTATCATGAATCACTTATTCACCAAACATGGCGACGACGAGACAATAAAGATCGACCTTAACGACTACATTTCGTTCATCGAAAACGTCATTAAATCCTCGGATCAGATTTCCGCAGCTTCTCATTGGGTTAGATATCACATGCTTTAATCTCTCCCCTTCTTATTCTCCCTTCTTATGCAAATTTTTATGATCATTTTAGGCTCAGGGAAGCAAAGTGCATGTTGAACTTTCAGATGACTCCTTCACATATCTCTCCTCAATTGAACCACCAGTTTGCACCCTTCATGATATCTCAAAACAGGTCTTTGCTTAGCCAAAAATCTTGAGATTTTAACCTCACTACTTTTGTATTGAAATAATGTCAATTTTCAGATGGGATGTAAGGCTGCTGGGATAGATATAGCTCACAAAACAACTCTTGATATTCTAAGTAAGCTGACCAAATATTCATGGGAGGCGAAGGCCGTGCTGATCTTCGCGGCGTTCGCTATGAACTATGGAGCTTTGTGGCACCTCGACAATTACTCGCGCTCGGACCCGCTCGCTAAATCGTTGGCGATGATCAAGCGAGTGGGTTCGCTGAGGAAGGAGCTGGATTCTGTGCAATATGGGCAGGTGTTTTTTGGGCCCAACAGTTTGATATACAGCTGCTTGAAGGCCATTAAATACATGAATGAATTCAAGAACTTGTCCAAATATGATATCAAAGAAGTGCCTGAATTGTCTGCGGCACTTCGCCGGATCCCATTGGTTTCTTATTGGATTGTTCATGCTCTTGTGGCTTCCAGCATTGATCTTCATTGCTATCTTTCTGGCACGGAGTAA

mRNA sequence

AACTAACCAAACCAAAATCATGTGTGCTTCATTTGCACCTCGTCCAAAGATCTCGGTCGTTCCATTGGCGCTCGCTCTAATGCAAAAAACAGACAAGGAACAGACGAATCTAAAGCACTTATCCGACGATGTTATCATGAATCACTTATTCACCAAACATGGCGACGACGAGACAATAAAGATCGACCTTAACGACTACATTTCGTTCATCGAAAACGTCATTAAATCCTCGGATCAGATTTCCGCAGCTTCTCATTGGGCTCAGGGAAGCAAAGTGCATGTTGAACTTTCAGATGACTCCTTCACATATCTCTCCTCAATTGAACCACCAGTTTGCACCCTTCATGATATCTCAAAACAGATGGGATGTAAGGCTGCTGGGATAGATATAGCTCACAAAACAACTCTTGATATTCTAAGTAAGCTGACCAAATATTCATGGGAGGCGAAGGCCGTGCTGATCTTCGCGGCGTTCGCTATGAACTATGGAGCTTTGTGGCACCTCGACAATTACTCGCGCTCGGACCCGCTCGCTAAATCGTTGGCGATGATCAAGCGAGTGGGTTCGCTGAGGAAGGAGCTGGATTCTGTGCAATATGGGCAGGTGTTTTTTGGGCCCAACAGTTTGATATACAGCTGCTTGAAGGCCATTAAATACATGAATGAATTCAAGAACTTGTCCAAATATGATATCAAAGAAGTGCCTGAATTGTCTGCGGCACTTCGCCGGATCCCATTGGTTTCTTATTGGATTGTTCATGCTCTTGTGGCTTCCAGCATTGATCTTCATTGCTATCTTTCTGGCACGGAGTAA

Coding sequence (CDS)

ATGTGTGCTTCATTTGCACCTCGTCCAAAGATCTCGGTCGTTCCATTGGCGCTCGCTCTAATGCAAAAAACAGACAAGGAACAGACGAATCTAAAGCACTTATCCGACGATGTTATCATGAATCACTTATTCACCAAACATGGCGACGACGAGACAATAAAGATCGACCTTAACGACTACATTTCGTTCATCGAAAACGTCATTAAATCCTCGGATCAGATTTCCGCAGCTTCTCATTGGGCTCAGGGAAGCAAAGTGCATGTTGAACTTTCAGATGACTCCTTCACATATCTCTCCTCAATTGAACCACCAGTTTGCACCCTTCATGATATCTCAAAACAGATGGGATGTAAGGCTGCTGGGATAGATATAGCTCACAAAACAACTCTTGATATTCTAAGTAAGCTGACCAAATATTCATGGGAGGCGAAGGCCGTGCTGATCTTCGCGGCGTTCGCTATGAACTATGGAGCTTTGTGGCACCTCGACAATTACTCGCGCTCGGACCCGCTCGCTAAATCGTTGGCGATGATCAAGCGAGTGGGTTCGCTGAGGAAGGAGCTGGATTCTGTGCAATATGGGCAGGTGTTTTTTGGGCCCAACAGTTTGATATACAGCTGCTTGAAGGCCATTAAATACATGAATGAATTCAAGAACTTGTCCAAATATGATATCAAAGAAGTGCCTGAATTGTCTGCGGCACTTCGCCGGATCCCATTGGTTTCTTATTGGATTGTTCATGCTCTTGTGGCTTCCAGCATTGATCTTCATTGCTATCTTTCTGGCACGGAGTAA

Homology

[Close]

BLAST of CmoCh08G010800 vs. Swiss-Prot
Match: SEOB_ARATH (Protein SIEVE ELEMENT OCCLUSION B OS=Arabidopsis thaliana GN=SEOB PE=1 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 3.6e-15
Identity = 60/227 (26.43%), Postives = 107/227 (47.14%), Query Frame = 1


Query: 29  TNLKHLSDDVIMNHLFTKHGDDETIKIDLNDYISFIENVIKSSDQISAASHWAQGSKVHV 88
           T L   SD+ +M  L  +    +  ++ +   +S +E+++   D+ +  S     S + +
Sbjct: 32  TGLAMSSDESMMLKLIQQTHSPDAREVQVRGLLSLVEDIL---DRATLDSEDTNASMLPL 91

Query: 89  ELSDDSF--TYLSSIEPPVCTLHDISKQMGCKAAGIDIAHKTTLDILSKLTKYSWEAKAV 148
              D     + +S ++     +  ++ ++  K+     +H+ T+ +   L+ + W+ K V
Sbjct: 92  PTEDKLMQSSMMSVLDSVSYAIDRVACEIAYKSLTGSDSHEITMSVFEHLSSFQWDGKLV 151

Query: 149 LIFAAFAMNYGALWHLDNYSRSDPLAKSLAMIKRVG-SLRKELDSVQYGQVFFGPNSLIY 208
           L  AAFA+NYG  W L  +   + LAKSLAM+K V    R  L+SV  G      N LI 
Sbjct: 152 LTLAAFALNYGEFWLLVQFYSKNQLAKSLAMLKLVPVQNRVTLESVSQGL-----NDLIR 211

Query: 209 SCLKAIKYMNEFKNL-SKYDIKEVPELSAALRRIPLVSYWIVHALVA 252
                   + E   L  +Y   +VP+LS  L  IP+  YW + +++A
Sbjct: 212 EMKSVTACVVELSELPDRYITPDVPQLSRILSTIPIAVYWTIRSVIA 250

[Close]

BLAST of CmoCh08G010800 vs. Swiss-Prot
Match: SEOA_ARATH (Protein SIEVE ELEMENT OCCLUSION A OS=Arabidopsis thaliana GN=SEOA PE=1 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 2.3e-09
Identity = 64/235 (27.23%), Postives = 103/235 (43.83%), Query Frame = 1


Query: 34  LSDDVIMNHLFTKHGDDETIKIDLNDYISFIENVIKSSDQISAASHWAQGSKVHVELSDD 93
           LSDD +M     K    + I  D+   +S + ++ KS    S  S   + S V  + +D 
Sbjct: 136 LSDDRVMADRVLKTHSPDMIFFDVTSLLSVVNDIFKSHVP-SIDSSAPKPSLVFKDYADH 195

Query: 94  SFTYLSSIEPPVCTLHDISKQMGCKAAG-------------IDIAHKTTLDILSKLTKYS 153
           +     S E     +  IS ++ CK                +D  + TT  +LS ++KY 
Sbjct: 196 T-----SFETFADLIDQISCEIDCKCLHGGESHGMMTSGLHLDSRNTTTFSVLSLVSKYR 255

Query: 154 WEAKAVLIFAAFAMNYGALWHLDNYSRSDPLAKSLAMIKRVGSLRKELDSVQYGQVFFGP 213
           W+AK VL+ +A A+ YG    L     ++ L KSLA+IK++ S            +F   
Sbjct: 256 WDAKLVLVLSALAVKYGVFLLLAETHATNQLTKSLALIKQLPS------------IFSRQ 315

Query: 214 NSLIYSCLKAIKYMNEFKNLSK--YDIKEVP--ELSAALR-RIPLVSYWIVHALV 251
           N+L     K    M +  +L+    DI ++P   ++AA    IP   YWIV  ++
Sbjct: 316 NALHQRLDKTRILMQDMVDLTTTIIDIYQLPPNHITAAFTDHIPTAVYWIVRCVL 352

[Close]

BLAST of CmoCh08G010800 vs. TrEMBL
Match: E5GC85_CUCME (Putative uncharacterized protein (Fragment) OS=Cucumis melo subsp. melo PE=4 SV=1)

HSP 1 Score: 276.9 bits (707), Expect = 2.5e-71
Identity = 133/241 (55.19%), Postives = 179/241 (74.27%), Query Frame = 1


Query: 24  TDKEQTNLKHLSDDVIMNHLFTKHGDDETIKIDLNDYISFIENVIKSSDQISAASHWAQG 83
           T KE+ + +H SD+V+  H++ KH DD+T KIDL+ YIS IE++I ++D+I+   H  +G
Sbjct: 24  TPKEELSTRHYSDEVVTGHIYAKHRDDDTTKIDLHSYISVIESIITTADRITDTVH--RG 83

Query: 84  SKVHVELSDDSFTYLSSIEPPVCTLHDISKQMGCKAAGIDIAHKTTLDILSKLTKYSWEA 143
           S+  +  S+DS    + IEPP+CTLH IS ++ CKA GI+ AH+TT++I   L  Y WEA
Sbjct: 84  SEGRLVYSNDSLASTAVIEPPLCTLHHISSELSCKAPGIEKAHETTIEIFEILANYPWEA 143

Query: 144 KAVLIFAAFAMNYGALWHLDNYSRSDPLAKSLAMIKRVGSLRKELDSVQYGQVFFGPNSL 203
           KA L   AFA +YG LWHL +YS++DPLAKSLA+IK+VG+L+K LDS++Y QV   P SL
Sbjct: 144 KAALTLLAFATDYGDLWHLYHYSQADPLAKSLAIIKKVGTLKKHLDSLRYRQVLLNPKSL 203

Query: 204 IYSCLKAIKYMNEFKNLSKYDIKEVPELSAALRRIPLVSYWIVHALVASSIDLHCYLSGT 263
           I SCL+A+KYM+E K  SKYD KE+PEL AALR IPLV+YW++H +VAS I+L  YLS T
Sbjct: 204 IQSCLQALKYMSEIKEFSKYDAKELPELPAALRLIPLVTYWVIHTIVASKIELSTYLSET 262

Query: 264 E 265
           E
Sbjct: 264 E 262

[Close]

BLAST of CmoCh08G010800 vs. TrEMBL
Match: A0A0A0LIA4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G199900 PE=4 SV=1)

HSP 1 Score: 276.2 bits (705), Expect = 4.2e-71
Identity = 132/241 (54.77%), Postives = 180/241 (74.69%), Query Frame = 1


Query: 24  TDKEQTNLKHLSDDVIMNHLFTKHGDDETIKIDLNDYISFIENVIKSSDQISAASHWAQG 83
           T KE+ + +H SD+V+ +H++ KH DD+T KIDL++YIS IE++I ++D+I+   H  +G
Sbjct: 24  TTKEELSTRHYSDEVVTSHIYAKHRDDDTAKIDLHNYISVIESIITTADRITDTVH--RG 83

Query: 84  SKVHVELSDDSFTYLSSIEPPVCTLHDISKQMGCKAAGIDIAHKTTLDILSKLTKYSWEA 143
           S+  +  S+DS    + IEPP+CTLH IS ++ CK  GI+ AH+TT++I   L  Y WEA
Sbjct: 84  SEGRLVYSNDSLASAAVIEPPLCTLHRISSELSCKPPGIEKAHETTIEIFEILANYPWEA 143

Query: 144 KAVLIFAAFAMNYGALWHLDNYSRSDPLAKSLAMIKRVGSLRKELDSVQYGQVFFGPNSL 203
           KA L   AFA +YG LWHL +YS++DPLAKSLA+IK+V +L+K LDS++Y QV   P SL
Sbjct: 144 KAALTLLAFAADYGDLWHLYHYSQADPLAKSLAIIKKVATLKKHLDSLRYRQVLLNPKSL 203

Query: 204 IYSCLKAIKYMNEFKNLSKYDIKEVPELSAALRRIPLVSYWIVHALVASSIDLHCYLSGT 263
           I SCL+AIKYMNE K  +KYD+KE+PEL AALR IPLV+YW++H +VAS I+L  YLS T
Sbjct: 204 IQSCLQAIKYMNEIKEFAKYDVKELPELPAALRLIPLVTYWVIHTIVASKIELSTYLSET 262

Query: 264 E 265
           E
Sbjct: 264 E 262

[Close]

BLAST of CmoCh08G010800 vs. TrEMBL
Match: A0A0A0LIL1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G196890 PE=4 SV=1)

HSP 1 Score: 275.4 bits (703), Expect = 7.2e-71
Identity = 139/255 (54.51%), Postives = 183/255 (71.76%), Query Frame = 1


Query: 12  SVVPLALALMQKTD-KEQTNLKHLSDDVIMNHLFTKHGDDETIKIDLNDYISFIENVIKS 71
           S  P+ L   Q T+ KE+ + +H SDD++  H++ KH DD+T+KIDL +YIS IEN+I+ 
Sbjct: 9   STAPMPLHSKQSTNPKEELSTRHYSDDLVTGHIYAKHRDDDTVKIDLPNYISVIENIIEI 68

Query: 72  SDQISAASHWAQGSKVHVELSDDSFTYLSS-IEPPVCTLHDISKQMGCKAAGIDIAHKTT 131
           +DQI+   H  +G +  +  SD + T  +  IEPP+C LH IS Q+ CKA GI+ AH+TT
Sbjct: 69  ADQITDNVH--RGIEWRMTRSDAALTTSNVVIEPPLCILHRISSQLSCKAPGIEKAHETT 128

Query: 132 LDILSKLTKYSWEAKAVLIFAAFAMNYGALWHLDNYSRSDPLAKSLAMIKRVGSLRKELD 191
           L I   L  Y WEAKAVL   AFA +YG LWHL +YS  DPLAKSLA+IKRV SL+K LD
Sbjct: 129 LQIFETLANYPWEAKAVLTLIAFATDYGDLWHLHHYSHVDPLAKSLAIIKRVASLKKHLD 188

Query: 192 SVQYGQVFFGPNSLIYSCLKAIKYMNEFKNLSKYDIKEVPELSAALRRIPLVSYWIVHAL 251
           S++Y QV   P SLI SCL+AIK+MNE K  SKYD+KE+PEL +ALR+IPL++YW++H +
Sbjct: 189 SLRYRQVILNPKSLIQSCLQAIKHMNEIKEFSKYDVKELPELPSALRQIPLITYWVIHTI 248

Query: 252 VASSIDLHCYLSGTE 265
           VA+ I+L  YLS TE
Sbjct: 249 VAARIELSTYLSETE 261

[Close]

BLAST of CmoCh08G010800 vs. TrEMBL
Match: A0A0A0LNQ7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G193350 PE=4 SV=1)

HSP 1 Score: 274.6 bits (701), Expect = 1.2e-70
Identity = 133/258 (51.55%), Postives = 191/258 (74.03%), Query Frame = 1


Query: 7   PRPKISVVPLALALMQKTDKEQTNLKHLSDDVIMNHLFTKHGDDETIKIDLNDYISFIEN 66
           P P   + P  L  +  T K+  +L+H SD+++ +H++TKH +D  IKID+++YI+ +E+
Sbjct: 4   PLPNNPLAPSVLPKLSAT-KDDQSLRHYSDEIVTSHIYTKHREDNRIKIDVDNYIALVES 63

Query: 67  VIKSSDQISAASHWAQGSKVHVELSDDSFTYLSSIEPPVCTLHDISKQMGCKAAGIDIAH 126
           +I ++D+I+     AQG++  +  SD+ F  +++++PP+CTLH +S Q+ CKA GI+ AH
Sbjct: 64  IITTADRITETV--AQGTEGRLIFSDE-FLNVNAVDPPLCTLHHVSSQLSCKAPGIETAH 123

Query: 127 KTTLDILSKLTKYSWEAKAVLIFAAFAMNYGALWHLDNYSRSDPLAKSLAMIKRVGSLRK 186
           +TTL+IL  L  Y WEAKAVL   AFA  YG +WHL++YS  DPLAKSLAMIKRV  L+K
Sbjct: 124 ETTLEILDILVSYPWEAKAVLTLTAFATEYGDIWHLNHYSLLDPLAKSLAMIKRVPLLKK 183

Query: 187 ELDSVQYGQVFFGPNSLIYSCLKAIKYMNEFKNLSKYDIKEVPELSAALRRIPLVSYWIV 246
           +LDS++Y Q+   PNSLIYSCLKA+KY++  KN SKYDIKE+ ELS+ LR+IPLV+YWI+
Sbjct: 184 QLDSIKYRQLLLTPNSLIYSCLKAMKYISILKNFSKYDIKELSELSSVLRQIPLVAYWII 243

Query: 247 HALVASSIDLHCYLSGTE 265
           H +VAS I++  YL+ TE
Sbjct: 244 HIIVASRIEISSYLNETE 257

[Close]

BLAST of CmoCh08G010800 vs. TrEMBL
Match: I6V4B3_CUCMA (Sieve element occlusion protein 1 OS=Cucurbita maxima GN=SEO1 PE=2 SV=1)

HSP 1 Score: 270.4 bits (690), Expect = 2.3e-69
Identity = 135/242 (55.79%), Postives = 171/242 (70.66%), Query Frame = 1


Query: 24  TDKEQTNLKHLSDDVIMNHLFTKHGDDETIKIDLNDYISFIENVIKSSDQISAASH-WAQ 83
           T KE+   KH SD+++  H++ KH DD++ KIDL  YIS IEN+I ++DQI    H    
Sbjct: 23  THKEEVGTKHFSDELVTGHIYAKHRDDDSTKIDLPSYISVIENIITTADQIIDTVHRGTD 82

Query: 84  GSKVHVELSDDSFTYLSSIEPPVCTLHDISKQMGCKAAGIDIAHKTTLDILSKLTKYSWE 143
           G  VH   SD S  +   IEPP+CTLH IS ++ CKA GI+ AH+TTL+I   L  Y WE
Sbjct: 83  GRLVH---SDASLAFNVVIEPPLCTLHRISSELSCKAPGIEKAHETTLEIFEILANYPWE 142

Query: 144 AKAVLIFAAFAMNYGALWHLDNYSRSDPLAKSLAMIKRVGSLRKELDSVQYGQVFFGPNS 203
           AKA L   AFA +YG LWHL +YS +DPLAKSLA+IKRV +L+K LDS++Y QV   P S
Sbjct: 143 AKAALTLIAFAADYGDLWHLHHYSHADPLAKSLAIIKRVATLKKHLDSLRYRQVLLNPKS 202

Query: 204 LIYSCLKAIKYMNEFKNLSKYDIKEVPELSAALRRIPLVSYWIVHALVASSIDLHCYLSG 263
           LI SCL+AIKYM+E +  SKYD+KE+ EL AALR IPLV+YW++H +VAS I+L  YLS 
Sbjct: 203 LIQSCLQAIKYMDEIREFSKYDVKELSELPAALRLIPLVTYWVIHTIVASRIELSSYLSE 261

Query: 264 TE 265
           TE
Sbjct: 263 TE 261

[Close]

BLAST of CmoCh08G010800 vs. TAIR10
Match: AT3G01680.1 (AT3G01680.1 Mediator complex subunit Med28 (InterPro:IPR021640))

HSP 1 Score: 83.6 bits (205), Expect = 2.0e-16
Identity = 60/227 (26.43%), Postives = 107/227 (47.14%), Query Frame = 1


Query: 29  TNLKHLSDDVIMNHLFTKHGDDETIKIDLNDYISFIENVIKSSDQISAASHWAQGSKVHV 88
           T L   SD+ +M  L  +    +  ++ +   +S +E+++   D+ +  S     S + +
Sbjct: 32  TGLAMSSDESMMLKLIQQTHSPDAREVQVRGLLSLVEDIL---DRATLDSEDTNASMLPL 91

Query: 89  ELSDDSF--TYLSSIEPPVCTLHDISKQMGCKAAGIDIAHKTTLDILSKLTKYSWEAKAV 148
              D     + +S ++     +  ++ ++  K+     +H+ T+ +   L+ + W+ K V
Sbjct: 92  PTEDKLMQSSMMSVLDSVSYAIDRVACEIAYKSLTGSDSHEITMSVFEHLSSFQWDGKLV 151

Query: 149 LIFAAFAMNYGALWHLDNYSRSDPLAKSLAMIKRVG-SLRKELDSVQYGQVFFGPNSLIY 208
           L  AAFA+NYG  W L  +   + LAKSLAM+K V    R  L+SV  G      N LI 
Sbjct: 152 LTLAAFALNYGEFWLLVQFYSKNQLAKSLAMLKLVPVQNRVTLESVSQGL-----NDLIR 211

Query: 209 SCLKAIKYMNEFKNL-SKYDIKEVPELSAALRRIPLVSYWIVHALVA 252
                   + E   L  +Y   +VP+LS  L  IP+  YW + +++A
Sbjct: 212 EMKSVTACVVELSELPDRYITPDVPQLSRILSTIPIAVYWTIRSVIA 250

[Close]

BLAST of CmoCh08G010800 vs. TAIR10
Match: AT3G01670.1 (AT3G01670.1 unknown protein)

HSP 1 Score: 64.3 bits (155), Expect = 1.3e-10
Identity = 64/235 (27.23%), Postives = 103/235 (43.83%), Query Frame = 1


Query: 34  LSDDVIMNHLFTKHGDDETIKIDLNDYISFIENVIKSSDQISAASHWAQGSKVHVELSDD 93
           LSDD +M     K    + I  D+   +S + ++ KS    S  S   + S V  + +D 
Sbjct: 136 LSDDRVMADRVLKTHSPDMIFFDVTSLLSVVNDIFKSHVP-SIDSSAPKPSLVFKDYADH 195

Query: 94  SFTYLSSIEPPVCTLHDISKQMGCKAAG-------------IDIAHKTTLDILSKLTKYS 153
           +     S E     +  IS ++ CK                +D  + TT  +LS ++KY 
Sbjct: 196 T-----SFETFADLIDQISCEIDCKCLHGGESHGMMTSGLHLDSRNTTTFSVLSLVSKYR 255

Query: 154 WEAKAVLIFAAFAMNYGALWHLDNYSRSDPLAKSLAMIKRVGSLRKELDSVQYGQVFFGP 213
           W+AK VL+ +A A+ YG    L     ++ L KSLA+IK++ S            +F   
Sbjct: 256 WDAKLVLVLSALAVKYGVFLLLAETHATNQLTKSLALIKQLPS------------IFSRQ 315

Query: 214 NSLIYSCLKAIKYMNEFKNLSK--YDIKEVP--ELSAALR-RIPLVSYWIVHALV 251
           N+L     K    M +  +L+    DI ++P   ++AA    IP   YWIV  ++
Sbjct: 316 NALHQRLDKTRILMQDMVDLTTTIIDIYQLPPNHITAAFTDHIPTAVYWIVRCVL 352

[Close]

BLAST of CmoCh08G010800 vs. NCBI nr
Match: gi|659130475|ref|XP_008465192.1| (PREDICTED: uncharacterized protein LOC103502855 [Cucumis melo])

HSP 1 Score: 368.2 bits (944), Expect = 1.2e-98
Identity = 180/258 (69.77%), Postives = 213/258 (82.56%), Query Frame = 1


Query: 8   RPKISVVPLALALMQKTDK-EQTNLKHLSDDVIMNHLFTKHGDDETIKIDLNDYISFIEN 67
           RPK S   LALAL Q+ DK E+ +LKHLSDD I N +FT + D ET+KID++ YI FIE+
Sbjct: 5   RPKTSATALALALPQEIDKEEEKSLKHLSDDFITNRIFTINSDAETMKIDIDSYILFIES 64

Query: 68  VIKSSDQISAASHWAQGSKVHVELSDDSFTYLSSIEPPVCTLHDISKQMGCKAAGIDIAH 127
           VIKSSD+I+ ASHWA+GSK H EL+D++  Y + I+PP+CTLH IS +M CK  G + AH
Sbjct: 65  VIKSSDKIAVASHWAKGSKGHFELADETLKYPTQIDPPICTLHQISTEMICKDPGAETAH 124

Query: 128 KTTLDILSKLTKYSWEAKAVLIFAAFAMNYGALWHLDNYSRSDPLAKSLAMIKRVGSLRK 187
           +TTLDIL KL KYSW+AKAVLIF AFA  YG LWHLDNYS SD LAKSLA IKRV  LRK
Sbjct: 125 QTTLDILQKLAKYSWDAKAVLIFTAFATTYGVLWHLDNYSHSDTLAKSLATIKRVALLRK 184

Query: 188 ELDSVQYGQVFFGPNSLIYSCLKAIKYMNEFKNLSKYDIKEVPELSAALRRIPLVSYWIV 247
           ELDSV+YGQVFF PNS+IY+C+KAIKY+NEF+NLSKYD K+VPELSAALR+IPLVSYWI+
Sbjct: 185 ELDSVKYGQVFFNPNSMIYNCMKAIKYINEFRNLSKYDTKDVPELSAALRQIPLVSYWII 244

Query: 248 HALVASSIDLHCYLSGTE 265
           H LVASSI+LHCYLSG +
Sbjct: 245 HTLVASSIELHCYLSGVQ 262

[Close]

BLAST of CmoCh08G010800 vs. NCBI nr
Match: gi|449465384|ref|XP_004150408.1| (PREDICTED: uncharacterized protein LOC101217310 [Cucumis sativus])

HSP 1 Score: 363.2 bits (931), Expect = 3.8e-97
Identity = 178/258 (68.99%), Postives = 214/258 (82.95%), Query Frame = 1


Query: 8   RPKISVVPLALALMQKTDKEQT-NLKHLSDDVIMNHLFTKHGDDETIKIDLNDYISFIEN 67
           RPK S   LALAL Q+ +KE+  NLKHLSDDVI N +FT + DDET+KID++ YI FIE+
Sbjct: 5   RPKTSATALALALPQEINKEEEKNLKHLSDDVITNRIFTINSDDETMKIDIDSYILFIES 64

Query: 68  VIKSSDQISAASHWAQGSKVHVELSDDSFTYLSSIEPPVCTLHDISKQMGCKAAGIDIAH 127
           VIKSSD+I+ ASHWA+GSK +  L+D+S  Y + I+PP+CTLH IS +M CK  G++ A 
Sbjct: 65  VIKSSDKIAVASHWAKGSKGNFVLADESLKYPTQIDPPICTLHQISTEMTCKDPGVETAD 124

Query: 128 KTTLDILSKLTKYSWEAKAVLIFAAFAMNYGALWHLDNYSRSDPLAKSLAMIKRVGSLRK 187
           +TTL+IL KLT+YSW+AKAVLIF AFA NYG LWHLDNYS SD LAKSLA IKRV  LRK
Sbjct: 125 QTTLNILRKLTRYSWDAKAVLIFTAFATNYGVLWHLDNYSHSDTLAKSLATIKRVSLLRK 184

Query: 188 ELDSVQYGQVFFGPNSLIYSCLKAIKYMNEFKNLSKYDIKEVPELSAALRRIPLVSYWIV 247
           ELDSV+YGQVFF  NS+IY+C+KAIKY+NEF+ LSKYD K+VPELSAALR+IPLVSYWI+
Sbjct: 185 ELDSVKYGQVFFNQNSMIYNCMKAIKYINEFRTLSKYDTKDVPELSAALRQIPLVSYWII 244

Query: 248 HALVASSIDLHCYLSGTE 265
           H LVASSI+LHCYLSG +
Sbjct: 245 HTLVASSIELHCYLSGVQ 262

[Close]

BLAST of CmoCh08G010800 vs. NCBI nr
Match: gi|307136252|gb|ADN34084.1| (hypothetical protein [Cucumis melo subsp. melo])

HSP 1 Score: 276.9 bits (707), Expect = 3.6e-71
Identity = 133/241 (55.19%), Postives = 179/241 (74.27%), Query Frame = 1


Query: 24  TDKEQTNLKHLSDDVIMNHLFTKHGDDETIKIDLNDYISFIENVIKSSDQISAASHWAQG 83
           T KE+ + +H SD+V+  H++ KH DD+T KIDL+ YIS IE++I ++D+I+   H  +G
Sbjct: 24  TPKEELSTRHYSDEVVTGHIYAKHRDDDTTKIDLHSYISVIESIITTADRITDTVH--RG 83

Query: 84  SKVHVELSDDSFTYLSSIEPPVCTLHDISKQMGCKAAGIDIAHKTTLDILSKLTKYSWEA 143
           S+  +  S+DS    + IEPP+CTLH IS ++ CKA GI+ AH+TT++I   L  Y WEA
Sbjct: 84  SEGRLVYSNDSLASTAVIEPPLCTLHHISSELSCKAPGIEKAHETTIEIFEILANYPWEA 143

Query: 144 KAVLIFAAFAMNYGALWHLDNYSRSDPLAKSLAMIKRVGSLRKELDSVQYGQVFFGPNSL 203
           KA L   AFA +YG LWHL +YS++DPLAKSLA+IK+VG+L+K LDS++Y QV   P SL
Sbjct: 144 KAALTLLAFATDYGDLWHLYHYSQADPLAKSLAIIKKVGTLKKHLDSLRYRQVLLNPKSL 203

Query: 204 IYSCLKAIKYMNEFKNLSKYDIKEVPELSAALRRIPLVSYWIVHALVASSIDLHCYLSGT 263
           I SCL+A+KYM+E K  SKYD KE+PEL AALR IPLV+YW++H +VAS I+L  YLS T
Sbjct: 204 IQSCLQALKYMSEIKEFSKYDAKELPELPAALRLIPLVTYWVIHTIVASKIELSTYLSET 262

Query: 264 E 265
           E
Sbjct: 264 E 262

[Close]

BLAST of CmoCh08G010800 vs. NCBI nr
Match: gi|659130458|ref|XP_008465183.1| (PREDICTED: uncharacterized protein LOC103502846 [Cucumis melo])

HSP 1 Score: 276.9 bits (707), Expect = 3.6e-71
Identity = 133/241 (55.19%), Postives = 179/241 (74.27%), Query Frame = 1


Query: 24  TDKEQTNLKHLSDDVIMNHLFTKHGDDETIKIDLNDYISFIENVIKSSDQISAASHWAQG 83
           T KE+ + +H SD+V+  H++ KH DD+T KIDL+ YIS IE++I ++D+I+   H  +G
Sbjct: 24  TPKEELSTRHYSDEVVTGHIYAKHRDDDTTKIDLHSYISVIESIITTADRITDTVH--RG 83

Query: 84  SKVHVELSDDSFTYLSSIEPPVCTLHDISKQMGCKAAGIDIAHKTTLDILSKLTKYSWEA 143
           S+  +  S+DS    + IEPP+CTLH IS ++ CKA GI+ AH+TT++I   L  Y WEA
Sbjct: 84  SEGRLVYSNDSLASTAVIEPPLCTLHHISSELSCKAPGIEKAHETTIEIFEILANYPWEA 143

Query: 144 KAVLIFAAFAMNYGALWHLDNYSRSDPLAKSLAMIKRVGSLRKELDSVQYGQVFFGPNSL 203
           KA L   AFA +YG LWHL +YS++DPLAKSLA+IK+VG+L+K LDS++Y QV   P SL
Sbjct: 144 KAALTLLAFATDYGDLWHLYHYSQADPLAKSLAIIKKVGTLKKHLDSLRYRQVLLNPKSL 203

Query: 204 IYSCLKAIKYMNEFKNLSKYDIKEVPELSAALRRIPLVSYWIVHALVASSIDLHCYLSGT 263
           I SCL+A+KYM+E K  SKYD KE+PEL AALR IPLV+YW++H +VAS I+L  YLS T
Sbjct: 204 IQSCLQALKYMSEIKEFSKYDAKELPELPAALRLIPLVTYWVIHTIVASKIELSTYLSET 262

Query: 264 E 265
           E
Sbjct: 264 E 262

[Close]

BLAST of CmoCh08G010800 vs. NCBI nr
Match: gi|778668884|ref|XP_004150431.2| (PREDICTED: uncharacterized protein LOC101203597 [Cucumis sativus])

HSP 1 Score: 276.2 bits (705), Expect = 6.1e-71
Identity = 132/241 (54.77%), Postives = 180/241 (74.69%), Query Frame = 1


Query: 24  TDKEQTNLKHLSDDVIMNHLFTKHGDDETIKIDLNDYISFIENVIKSSDQISAASHWAQG 83
           T KE+ + +H SD+V+ +H++ KH DD+T KIDL++YIS IE++I ++D+I+   H  +G
Sbjct: 24  TTKEELSTRHYSDEVVTSHIYAKHRDDDTAKIDLHNYISVIESIITTADRITDTVH--RG 83

Query: 84  SKVHVELSDDSFTYLSSIEPPVCTLHDISKQMGCKAAGIDIAHKTTLDILSKLTKYSWEA 143
           S+  +  S+DS    + IEPP+CTLH IS ++ CK  GI+ AH+TT++I   L  Y WEA
Sbjct: 84  SEGRLVYSNDSLASAAVIEPPLCTLHRISSELSCKPPGIEKAHETTIEIFEILANYPWEA 143

Query: 144 KAVLIFAAFAMNYGALWHLDNYSRSDPLAKSLAMIKRVGSLRKELDSVQYGQVFFGPNSL 203
           KA L   AFA +YG LWHL +YS++DPLAKSLA+IK+V +L+K LDS++Y QV   P SL
Sbjct: 144 KAALTLLAFAADYGDLWHLYHYSQADPLAKSLAIIKKVATLKKHLDSLRYRQVLLNPKSL 203

Query: 204 IYSCLKAIKYMNEFKNLSKYDIKEVPELSAALRRIPLVSYWIVHALVASSIDLHCYLSGT 263
           I SCL+AIKYMNE K  +KYD+KE+PEL AALR IPLV+YW++H +VAS I+L  YLS T
Sbjct: 204 IQSCLQAIKYMNEIKEFAKYDVKELPELPAALRLIPLVTYWVIHTIVASKIELSTYLSET 262

Query: 264 E 265
           E
Sbjct: 264 E 262

The following BLAST results are available for this feature:

BLAST of CmoCh08G010800 vs. Swiss-Prot


Match Name	E-value	Identity	Description
SEOB_ARATH	3.6e-15	26.43	Protein SIEVE ELEMENT OCCLUSION B OS=Arabidopsis thaliana GN=SEOB PE=1 SV=1	[more]
SEOA_ARATH	2.3e-09	27.23	Protein SIEVE ELEMENT OCCLUSION A OS=Arabidopsis thaliana GN=SEOA PE=1 SV=1	[more]

BLAST of CmoCh08G010800 vs. TrEMBL


Match Name	E-value	Identity	Description
E5GC85_CUCME	2.5e-71	55.19	Putative uncharacterized protein (Fragment) OS=Cucumis melo subsp. melo PE=4 SV=...	[more]
A0A0A0LIA4_CUCSA	4.2e-71	54.77	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G199900 PE=4 SV=1	[more]
A0A0A0LIL1_CUCSA	7.2e-71	54.51	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G196890 PE=4 SV=1	[more]
A0A0A0LNQ7_CUCSA	1.2e-70	51.55	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G193350 PE=4 SV=1	[more]
I6V4B3_CUCMA	2.3e-69	55.79	Sieve element occlusion protein 1 OS=Cucurbita maxima GN=SEO1 PE=2 SV=1	[more]

BLAST of CmoCh08G010800 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G01680.1	2.0e-16	26.43	Mediator complex subunit Med28 (InterPro:IPR021640)	[more]
AT3G01670.1	1.3e-10	27.23	unknown protein	[more]

BLAST of CmoCh08G010800 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659130475\|ref\|XP_008465192.1\|	1.2e-98	69.77	PREDICTED: uncharacterized protein LOC103502855 [Cucumis melo]	[more]
gi\|449465384\|ref\|XP_004150408.1\|	3.8e-97	68.99	PREDICTED: uncharacterized protein LOC101217310 [Cucumis sativus]	[more]
gi\|307136252\|gb\|ADN34084.1\|	3.6e-71	55.19	hypothetical protein [Cucumis melo subsp. melo]	[more]
gi\|659130458\|ref\|XP_008465183.1\|	3.6e-71	55.19	PREDICTED: uncharacterized protein LOC103502846 [Cucumis melo]	[more]
gi\|778668884\|ref\|XP_004150431.2\|	6.1e-71	54.77	PREDICTED: uncharacterized protein LOC101203597 [Cucumis sativus]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR027942	SEO_N

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0010088	phloem development
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh08G010800.1	CmoCh08G010800.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR027942	Sieve element occlusion, N-terminal	PFAM	PF14576	SEO_N	coord: 35..255 score: 1.3
None	No IPR available	PANTHER	PTHR33232	FAMILY NOT NAMED	coord: 8..252 score: 1.1
None	No IPR available	PANTHER	PTHR33232:SF5	SUBFAMILY NOT NAMED	coord: 8..252 score: 1.1

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh08G010800	Cp4.1LG17g01760	Cucurbita pepo (Zucchini)	cmocpeB853
CmoCh08G010800	Bhi12G001474	Wax gourd	cmowgoB1084
CmoCh08G010800	CsGy2G010700	Cucumber (Gy14) v2	cgybcmoB254
CmoCh08G010800	Carg15869	Silver-seed gourd	carcmoB0449

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh08G010800	Cucumber (Chinese Long) v3	cmocucB1026
CmoCh08G010800	Cucumber (Chinese Long) v3	cmocucB1027
CmoCh08G010800	Cucumber (Chinese Long) v3	cmocucB1032
CmoCh08G010800	Cucumber (Chinese Long) v3	cmocucB1070
CmoCh08G010800	Watermelon (97103) v2	cmowmbB896
CmoCh08G010800	Watermelon (97103) v2	cmowmbB886
CmoCh08G010800	Watermelon (97103) v2	cmowmbB920
CmoCh08G010800	Wax gourd	cmowgoB1097
CmoCh08G010800	Wax gourd	cmowgoB1101
CmoCh08G010800	Cucurbita moschata (Rifu)	cmocmoB233
CmoCh08G010800	Cucurbita moschata (Rifu)	cmocmoB310
CmoCh08G010800	Cucurbita moschata (Rifu)	cmocmoB484
CmoCh08G010800	Cucumber (Gy14) v1	cgycmoB0720
CmoCh08G010800	Cucumber (Gy14) v1	cgycmoB1059
CmoCh08G010800	Cucurbita maxima (Rimu)	cmacmoB279
CmoCh08G010800	Cucurbita maxima (Rimu)	cmacmoB365
CmoCh08G010800	Cucurbita maxima (Rimu)	cmacmoB537
CmoCh08G010800	Cucurbita maxima (Rimu)	cmacmoB837
CmoCh08G010800	Cucurbita maxima (Rimu)	cmacmoB912
CmoCh08G010800	Wild cucumber (PI 183967)	cmocpiB879
CmoCh08G010800	Wild cucumber (PI 183967)	cmocpiB883
CmoCh08G010800	Cucumber (Chinese Long) v2	cmocuB868
CmoCh08G010800	Cucumber (Chinese Long) v2	cmocuB872
CmoCh08G010800	Melon (DHL92) v3.5.1	cmomeB832
CmoCh08G010800	Melon (DHL92) v3.5.1	cmomeB828
CmoCh08G010800	Watermelon (Charleston Gray)	cmowcgB792
CmoCh08G010800	Watermelon (Charleston Gray)	cmowcgB799
CmoCh08G010800	Watermelon (Charleston Gray)	cmowcgB808
CmoCh08G010800	Watermelon (97103) v1	cmowmB853
CmoCh08G010800	Watermelon (97103) v1	cmowmB856
CmoCh08G010800	Watermelon (97103) v1	cmowmB867
CmoCh08G010800	Cucurbita pepo (Zucchini)	cmocpeB833
CmoCh08G010800	Cucurbita pepo (Zucchini)	cmocpeB849
CmoCh08G010800	Cucurbita pepo (Zucchini)	cmocpeB862
CmoCh08G010800	Cucurbita pepo (Zucchini)	cmocpeB866
CmoCh08G010800	Bottle gourd (USVL1VR-Ls)	cmolsiB797
CmoCh08G010800	Bottle gourd (USVL1VR-Ls)	cmolsiB823
CmoCh08G010800	Cucumber (Gy14) v2	cgybcmoB421
CmoCh08G010800	Cucumber (Gy14) v2	cgybcmoB959
CmoCh08G010800	Melon (DHL92) v3.6.1	cmomedB935
CmoCh08G010800	Melon (DHL92) v3.6.1	cmomedB940
CmoCh08G010800	Silver-seed gourd	carcmoB0326
CmoCh08G010800	Silver-seed gourd	carcmoB0333
CmoCh08G010800	Silver-seed gourd	carcmoB1025
CmoCh08G010800	Silver-seed gourd	carcmoB1289