CmoCh08G006800 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh08G006800
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionCytochrome c oxidase assembly COX19
LocationCmo_Chr08 : 4359981 .. 4362460 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TATGCCGCCATAGACCAAGTTTCTGTTGAATCACTAGCTACTCACCGGCGCCGTGATTCGTCAAGCTTGTTTGCGACGTCGCGGTCTGTATGAGACAAGACCTATGAAATTTTCTATTTCAAGCTATCAGGAGTTTCCACAATGAGTGCAGGTACTCTAGCACATGCGTTCTTAATACTGAGGGCGAGAGAGAGCATGATTTTTCTCTTTTTTTGGGGTGAATTTATGTTAGTTTCGAAGAGGCGAGGGATTAGAGAATTTGTATCATGTCAAATGGTTTAGTGAGTTAAGATTCTTGATTGTTGCTGGTAAAATATATATACAGTTCTGATCGGGGATCGGTTCTTTAAGGAGCTGCATTTTTAGCCTTTTTCAGACAACTAGCTTATTCGGAAGAATGAAAAGATTTGAAAATAGTTGGATATGCTTGCAGAATCTCAACTCTAAATAGGAGTTTCTATCAATTGATTGAAACCAGTGAATGGATTGGGTTTGAGCAATCTGTGGGTTGATTGTGATGTTTTTATTCCATTTGCTTTACATGTCTCTTAGTTGAGCTTAGTCTTCAATGTAGAAAGAGTTGAATTACTTGATGACTATAGAGAATGATTTGAAAGGGAAAATTCATGTTTTTATTCCATTTGCTTATCAGTTGCTTAAACATGATCACCGGATTTTTAAAATTTACATAAATGACTGATAGTTTTCACTCTTTTCAATCTTATTGGGTTCAGACTAATTGTGATTTAGTCTTTTTCGTTTTACTATAGCTTGGTATATCAGGCAATGATGGCCATCCTTTGCGTTAGCTTCTCATTGCAAGTTTTGTGATCTGTGAAAGAACTATTTAGCGGTGTTTAGCTTTGTGAGTAATATTGATATTACCTGGAATTCATATTGTTTCTTCTTTGAGTTTTAGTGGATATATAATGAAGGGATAATTTGCTAAGAGGAGTTAATGAAAACCTTCAAATGCTTTGGTGATGAAAAAGAAGATAATGATTACAACGAGCTTACATAGAATGGATATATTTCTGTTTTAGCTAAATTGATTTGGTGAGAGCTATTGTGATCTTTGCAGGTGGTTCATTTGGGGGAAATAGAGGATTGAGACCGGTACCCCCAGAAAAAGGAGTCTTCCCTTTGGATCATATGCACCTCTGCGACCTGGTATTTCTTTTTAGAGCACTATTGTTTTCACCTAGGATATGTGGTTTTTGGGATTCTTTTGAAGGTTTCTTTGTGTTCATTGCTTGTTTTATGATGCATGAGCTTCATTGCAGGAGAAGAAAGAATACCTCAATTGTCTTAAAACGTCTGGTCACCAATCTGAAAAATGCAGGCACTTATCAAAAAAATACCTTCAATGTCGTATGGAAAAGTAAGACTGTTGAAATTTCTATATTATGTTTTTGTATTAATAAGTGTTGATTTGCTCTCTGTATTCTAGATTCATAAACTTTTGTTTGTGGGAACCTGGGTTATTGTTATCTTTCAATCCTGATGTTTTACACACCAATACACCACTATTAGCTGAAATGGTGGCATAAATGAATGTATATGAACAAACCCTTCATCCATATACCAATTCCAGTAGAACAGCAAGTGCTATCATTGTGATCTAACAAAAAAGGAAAAAAAGAGGTGCATGGTGCAAGTAGCTATAAGTTCCGCCTTTCTGAGGCTCTGCCAACTTTCCCTTCCTTGTCTAGCTTAGCTACAAGCCAACTAACTCATATGCCCTGAAAACTAGGAATGAACCTTTCCCTCGTTTTCTAACAACTTCTATATACTTCATCAATCTATCATTCTACCCTTATAGCCCAAGCCTACCGCTCGTAGATATTGTCCGCTTTGGCCTGTTACGTATCGCCGTCAGCCTCATGCGTATACTAGGGAGAGCGTGGGATTTCACATTTACTCGTCCTGTGATTCTATTCCTTTGAGATGCAATTTGTTCTTTTGAACGGTTTTGGTTCAACTTTGGTTACATTGGTCTAGCACAAACTAGAGAGTAACTGGAAACAGAGTGCATTATTCATTTCTTTTCCTCTTATCTTACGGCAAATAAGGGGGACACACTCGATTGATATTGTTATGAATACTGCTACCAAAATTATTGGTCGTAGTTTGTGTGTGCTACCCATCCAGTTTCTTTTCTCATTGGTTTGAACTTTGTTATTTCTTCTCTAACACAGCTCGGCGGTGTGAGTATGGTTATTCATGAGATTTCATTGGGAACTTGCAGGAATTTGATGGCAAAGCAAGACATGGCAGAACTAGGATTCGGGAATTTGAGTCAGCCCAGTTTGTCTGGCGATAAATTGGAACAAGTTTAAACTGTTCATCCATAGATAACCCTGAGTCGAAGATCTTAGTTGAAGGAAGCGGAATTGATTTTCCTTGATGTATCACTGAACTTAAATCAAGGGACTAATTCAACAAGCCTTTATACCATTCATTGATTGTTTTTATCTCAC

mRNA sequence

TATGCCGCCATAGACCAAGTTTCTGTTGAATCACTAGCTACTCACCGGCGCCGTGATTCGTCAAGCTTGTTTGCGACGTCGCGGTCTGTATGAGACAAGACCTATGAAATTTTCTATTTCAAGCTATCAGGAGTTTCCACAATGAGTGCAGGTGGTTCATTTGGGGGAAATAGAGGATTGAGACCGGTACCCCCAGAAAAAGGAGTCTTCCCTTTGGATCATATGCACCTCTGCGACCTGGAGAAGAAAGAATACCTCAATTGTCTTAAAACGTCTGGTCACCAATCTGAAAAATGCAGGCACTTATCAAAAAAATACCTTCAATGTCGTATGGAAAAGAATTTGATGGCAAAGCAAGACATGGCAGAACTAGGATTCGGGAATTTGAGTCAGCCCAGTTTGTCTGGCGATAAATTGGAACAAGTTTAAACTGTTCATCCATAGATAACCCTGAGTCGAAGATCTTAGTTGAAGGAAGCGGAATTGATTTTCCTTGATGTATCACTGAACTTAAATCAAGGGACTAATTCAACAAGCCTTTATACCATTCATTGATTGTTTTTATCTCAC

Coding sequence (CDS)

ATGAGTGCAGGTGGTTCATTTGGGGGAAATAGAGGATTGAGACCGGTACCCCCAGAAAAAGGAGTCTTCCCTTTGGATCATATGCACCTCTGCGACCTGGAGAAGAAAGAATACCTCAATTGTCTTAAAACGTCTGGTCACCAATCTGAAAAATGCAGGCACTTATCAAAAAAATACCTTCAATGTCGTATGGAAAAGAATTTGATGGCAAAGCAAGACATGGCAGAACTAGGATTCGGGAATTTGAGTCAGCCCAGTTTGTCTGGCGATAAATTGGAACAAGTTTAA
Homology
[Close]
BLAST of CmoCh08G006800 vs. Swiss-Prot
Match: COX19_BOVIN (Cytochrome c oxidase assembly protein COX19 OS=Bos taurus GN=COX19 PE=3 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 1.1e-14
Identity = 36/82 (43.90%), Postives = 58/82 (70.73%), Query Frame = 1 

Query: 1  MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYLNCLKTSGHQSEKCRHLSKKYL 60
          MS   +FG ++  +P PP+KG FPLDH   C   K++++ CL+ +  ++  CR+ SK+YL
Sbjct: 1  MSTAMNFG-SKSFQPRPPDKGSFPLDHFGECKSFKEKFMKCLRDNNFENALCRNESKEYL 60

Query: 61 QCRMEKNLMAKQDMAELGFGNL 83
          +CRME+ LMA++ + +LGFG+L
Sbjct: 61 ECRMERQLMAQEPLEKLGFGDL 81

[Close]
BLAST of CmoCh08G006800 vs. Swiss-Prot
Match: COX19_USTMA (Cytochrome c oxidase assembly protein COX19 OS=Ustilago maydis (strain 521 / FGSC 9021) GN=COX19 PE=3 SV=2)

HSP 1 Score: 80.1 bits (196), Expect = 1.4e-14
Identity = 36/75 (48.00%), Postives = 51/75 (68.00%), Query Frame = 1 

Query: 17 PPEKGVFPLDHMHLCDLEKKEYLNCLKTSGHQSEKCRHLSKKYLQCRMEKNLMAKQDMAE 76
          PPE+G FPLDH   C    +EY+NC+K + + + KCRHLS+ YLQCRM+K LM + +M  
Sbjct: 16 PPERGSFPLDHDGECKSVMQEYMNCIKYNRNDNGKCRHLSRAYLQCRMDKGLMEQDNMDN 75

Query: 77 LGFGNLSQPSLSGDK 92
          LGF ++  P+ +  K
Sbjct: 76 LGFKDVVDPASTETK 90

[Close]
BLAST of CmoCh08G006800 vs. Swiss-Prot
Match: COX19_CRYNB (Cytochrome c oxidase assembly protein COX19 OS=Cryptococcus neoformans var. neoformans serotype D (strain B-3501A) GN=COX19 PE=3 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 1.4e-14
Identity = 36/73 (49.32%), Postives = 48/73 (65.75%), Query Frame = 1 

Query: 14 RPVPPEKGVFPLDHMHLCDLEKKEYLNCLKTSGHQSEKCRHLSKKYLQCRMEKNLMAKQD 73
          +P PP +G FPLDH   C      YL C+K + + + KCR  SK+YL+CRM+K LMA+ D
Sbjct: 13 KPSPPARGSFPLDHDGECKAFMISYLKCMKENANDNGKCRLFSKQYLECRMDKGLMARDD 72

Query: 74 MAELGFGNLSQPS 87
          MA LG G++  PS
Sbjct: 73 MANLGLGDVVDPS 85

[Close]
BLAST of CmoCh08G006800 vs. Swiss-Prot
Match: COX19_CRYNJ (Cytochrome c oxidase assembly protein COX19 OS=Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565) GN=COX19 PE=3 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 1.4e-14
Identity = 36/73 (49.32%), Postives = 48/73 (65.75%), Query Frame = 1 

Query: 14 RPVPPEKGVFPLDHMHLCDLEKKEYLNCLKTSGHQSEKCRHLSKKYLQCRMEKNLMAKQD 73
          +P PP +G FPLDH   C      YL C+K + + + KCR  SK+YL+CRM+K LMA+ D
Sbjct: 13 KPSPPARGSFPLDHDGECKAFMISYLKCMKENANDNGKCRLFSKQYLECRMDKGLMARDD 72

Query: 74 MAELGFGNLSQPS 87
          MA LG G++  PS
Sbjct: 73 MANLGLGDVVDPS 85

[Close]
BLAST of CmoCh08G006800 vs. Swiss-Prot
Match: COX19_SCHPO (Cytochrome c oxidase assembly protein cox19, mitochondrial OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=cox19 PE=3 SV=2)

HSP 1 Score: 79.0 bits (193), Expect = 3.2e-14
Identity = 43/90 (47.78%), Postives = 51/90 (56.67%), Query Frame = 1 

Query: 6  SFGGNRGLRPV----PPEKGVFPLDHMHLCDLEKKEYLNCLKTSGHQSEKCRHLSKKYLQ 65
          SFG   G  P+    PPE+G FPLDH   C    K+YL C+K      E+CR L+KKYLQ
Sbjct: 2  SFGAAGGSLPMTTREPPERGSFPLDHFGECTHVMKQYLECIKVKRENQEECRLLAKKYLQ 61

Query: 66 CRMEKNLMAKQDMAELGF---GNLSQPSLS 89
          CRM+  L  K DM  LGF    N +  SLS
Sbjct: 62 CRMDTGLFGKDDMKNLGFHGDENATSTSLS 91

[Close]
BLAST of CmoCh08G006800 vs. TrEMBL
Match: A0A0V0GNZ6_SOLCH (Putative cytochrome c oxidase assembly protein COX19-like OS=Solanum chacoense PE=4 SV=1)

HSP 1 Score: 166.4 bits (420), Expect = 1.7e-38
Identity = 78/95 (82.11%), Postives = 88/95 (92.63%), Query Frame = 1 

Query: 1  MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYLNCLKTSGHQSEKCRHLSKKYL 60
          MSAGG+FGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYLNCLK++GH+SE+CRHLS+KYL
Sbjct: 1  MSAGGAFGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYLNCLKSAGHKSEECRHLSRKYL 60

Query: 61 QCRMEKNLMAKQDMAELGFG-NLSQPSLSGDKLEQ 95
          +CRMEKNLMAKQDM+ELGFG N+   + S DK EQ
Sbjct: 61 ECRMEKNLMAKQDMSELGFGKNVDAGTKSEDKTEQ 95

[Close]
BLAST of CmoCh08G006800 vs. TrEMBL
Match: M1CIA6_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400026453 PE=4 SV=1)

HSP 1 Score: 165.2 bits (417), Expect = 3.8e-38
Identity = 76/94 (80.85%), Postives = 84/94 (89.36%), Query Frame = 1 

Query: 1  MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYLNCLKTSGHQSEKCRHLSKKYL 60
          MSAGG+FGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYLNCLK+SGH+S+ CRHLSKKYL
Sbjct: 1  MSAGGAFGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYLNCLKSSGHKSDNCRHLSKKYL 60

Query: 61 QCRMEKNLMAKQDMAELGFGNLSQPSLSGDKLEQ 95
           CRMEKNLMAKQDM+ELGFG       S +++EQ
Sbjct: 61 VCRMEKNLMAKQDMSELGFGKNYDAETSSEEMEQ 94

[Close]
BLAST of CmoCh08G006800 vs. TrEMBL
Match: K4DFC6_SOLLC (Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1)

HSP 1 Score: 165.2 bits (417), Expect = 3.8e-38
Identity = 76/94 (80.85%), Postives = 84/94 (89.36%), Query Frame = 1 

Query: 1  MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYLNCLKTSGHQSEKCRHLSKKYL 60
          MSAGG+FGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYLNCLK+SGH+S+ CRHLSKKYL
Sbjct: 1  MSAGGAFGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYLNCLKSSGHKSDNCRHLSKKYL 60

Query: 61 QCRMEKNLMAKQDMAELGFGNLSQPSLSGDKLEQ 95
           CRMEKNLMAKQDM+ELGFG       S +++EQ
Sbjct: 61 VCRMEKNLMAKQDMSELGFGKNYDAETSSEEMEQ 94

[Close]
BLAST of CmoCh08G006800 vs. TrEMBL
Match: M0ZRG9_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG402002538 PE=4 SV=1)

HSP 1 Score: 164.9 bits (416), Expect = 4.9e-38
Identity = 77/95 (81.05%), Postives = 88/95 (92.63%), Query Frame = 1 

Query: 1  MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYLNCLKTSGHQSEKCRHLSKKYL 60
          MSAGG+FGGNRGLRPVPPEKGVFPLDHMHLCD+EKKEYLNCLK++GH+SE+CRHLSKKYL
Sbjct: 1  MSAGGAFGGNRGLRPVPPEKGVFPLDHMHLCDVEKKEYLNCLKSAGHKSEECRHLSKKYL 60

Query: 61 QCRMEKNLMAKQDMAELGFG-NLSQPSLSGDKLEQ 95
          +CRMEKNLMAKQDM+ELGFG N+   + S +K EQ
Sbjct: 61 ECRMEKNLMAKQDMSELGFGKNVDAGTKSEEKTEQ 95

[Close]
BLAST of CmoCh08G006800 vs. TrEMBL
Match: A0A0V0H7V2_SOLCH (Putative cytochrome c oxidase assembly protein COX19-like OS=Solanum chacoense PE=4 SV=1)

HSP 1 Score: 164.1 bits (414), Expect = 8.4e-38
Identity = 76/94 (80.85%), Postives = 83/94 (88.30%), Query Frame = 1 

Query: 1   MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYLNCLKTSGHQSEKCRHLSKKYL 60
           MSAGG+FGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYLNCLK+SGH+S+ CRHLSKKYL
Sbjct: 43  MSAGGAFGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYLNCLKSSGHKSDNCRHLSKKYL 102

Query: 61  QCRMEKNLMAKQDMAELGFGNLSQPSLSGDKLEQ 95
            CRMEKNLMAKQDM+ELGFG       S ++ EQ
Sbjct: 103 VCRMEKNLMAKQDMSELGFGKNYDAETSSEETEQ 136

[Close]
BLAST of CmoCh08G006800 vs. TAIR10
Match: AT1G69750.1 (AT1G69750.1 cytochrome c oxidase 19-2)

HSP 1 Score: 151.8 bits (382), Expect = 2.2e-37
Identity = 68/91 (74.73%), Postives = 78/91 (85.71%), Query Frame = 1 

Query: 1  MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYLNCLKTSGHQSEKCRHLSKKYL 60
          MS GG+FGGNRGLRP+PPEKG+FPLDH+H CD EKKEYL CLK+S H+SE+CRHLSKKYL
Sbjct: 1  MSTGGAFGGNRGLRPIPPEKGIFPLDHLHECDAEKKEYLGCLKSSAHKSEQCRHLSKKYL 60

Query: 61 QCRMEKNLMAKQDMAELGFGNLSQPSLSGDK 92
          QCRM KNLMAKQDMAELGF  + +   + DK
Sbjct: 61 QCRMAKNLMAKQDMAELGFSGVKELDSTEDK 91

[Close]
BLAST of CmoCh08G006800 vs. TAIR10
Match: AT1G66590.2 (AT1G66590.2 cytochrome c oxidase 19-1)

HSP 1 Score: 149.4 bits (376), Expect = 1.1e-36
Identity = 67/89 (75.28%), Postives = 77/89 (86.52%), Query Frame = 1 

Query: 3   AGGSFGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYLNCLKTSGHQSEKCRHLSKKYLQC 62
           AGG+FGGNRGLRP+PPEKG+FPLDH+H CD EKKEYL CLK+S H+SE+CRHLSKKYLQC
Sbjct: 18  AGGAFGGNRGLRPIPPEKGIFPLDHLHECDAEKKEYLGCLKSSAHKSEQCRHLSKKYLQC 77

Query: 63  RMEKNLMAKQDMAELGFGNLSQPSLSGDK 92
           RM KNLMAKQDMAELGF  + +   + DK
Sbjct: 78  RMAKNLMAKQDMAELGFSGVKELDSTEDK 106

[Close]
BLAST of CmoCh08G006800 vs. NCBI nr
Match: gi|449448014|ref|XP_004141761.1| (PREDICTED: cytochrome c oxidase assembly protein COX19-like [Cucumis sativus])

HSP 1 Score: 189.1 bits (479), Expect = 3.5e-45
Identity = 88/95 (92.63%), Postives = 93/95 (97.89%), Query Frame = 1 

Query: 1  MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYLNCLKTSGHQSEKCRHLSKKYL 60
          MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYLNCLKTSGH+SEKCRHLSK+YL
Sbjct: 1  MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYLNCLKTSGHKSEKCRHLSKRYL 60

Query: 61 QCRMEKNLMAKQDMAELGFGNLSQPSLSGDKLEQV 96
          +CRMEKNLMAKQDM ELGFGNLSQ +LSGDKLEQ+
Sbjct: 61 ECRMEKNLMAKQDMTELGFGNLSQANLSGDKLEQL 95

[Close]
BLAST of CmoCh08G006800 vs. NCBI nr
Match: gi|659124474|ref|XP_008462179.1| (PREDICTED: cytochrome c oxidase assembly protein COX19-like [Cucumis melo])

HSP 1 Score: 187.2 bits (474), Expect = 1.3e-44
Identity = 87/95 (91.58%), Postives = 93/95 (97.89%), Query Frame = 1 

Query: 1  MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYLNCLKTSGHQSEKCRHLSKKYL 60
          MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYLNCLKTSGH+SEKCRHLSKKYL
Sbjct: 1  MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYLNCLKTSGHKSEKCRHLSKKYL 60

Query: 61 QCRMEKNLMAKQDMAELGFGNLSQPSLSGDKLEQV 96
          +CRMEKNLMAKQDM ELGFG++SQ +LSGDKLEQ+
Sbjct: 61 ECRMEKNLMAKQDMTELGFGSVSQANLSGDKLEQL 95

[Close]
BLAST of CmoCh08G006800 vs. NCBI nr
Match: gi|565387355|ref|XP_006359466.1| (PREDICTED: cytochrome c oxidase assembly protein COX19-like [Solanum tuberosum])

HSP 1 Score: 165.2 bits (417), Expect = 5.4e-38
Identity = 76/94 (80.85%), Postives = 84/94 (89.36%), Query Frame = 1 

Query: 1  MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYLNCLKTSGHQSEKCRHLSKKYL 60
          MSAGG+FGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYLNCLK+SGH+S+ CRHLSKKYL
Sbjct: 1  MSAGGAFGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYLNCLKSSGHKSDNCRHLSKKYL 60

Query: 61 QCRMEKNLMAKQDMAELGFGNLSQPSLSGDKLEQ 95
           CRMEKNLMAKQDM+ELGFG       S +++EQ
Sbjct: 61 VCRMEKNLMAKQDMSELGFGKNYDAETSSEEMEQ 94

[Close]
BLAST of CmoCh08G006800 vs. NCBI nr
Match: gi|460413979|ref|XP_004252352.1| (PREDICTED: cytochrome c oxidase assembly protein COX19-like isoform X1 [Solanum lycopersicum])

HSP 1 Score: 165.2 bits (417), Expect = 5.4e-38
Identity = 76/94 (80.85%), Postives = 84/94 (89.36%), Query Frame = 1 

Query: 1   MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYLNCLKTSGHQSEKCRHLSKKYL 60
           MSAGG+FGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYLNCLK+SGH+S+ CRHLSKKYL
Sbjct: 34  MSAGGAFGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYLNCLKSSGHKSDNCRHLSKKYL 93

Query: 61  QCRMEKNLMAKQDMAELGFGNLSQPSLSGDKLEQ 95
            CRMEKNLMAKQDM+ELGFG       S +++EQ
Sbjct: 94  VCRMEKNLMAKQDMSELGFGKNYDAETSSEEMEQ 127

[Close]
BLAST of CmoCh08G006800 vs. NCBI nr
Match: gi|971542843|ref|XP_015162263.1| (PREDICTED: cytochrome c oxidase assembly protein COX19-like isoform X2 [Solanum tuberosum])

HSP 1 Score: 164.9 bits (416), Expect = 7.1e-38
Identity = 77/95 (81.05%), Postives = 88/95 (92.63%), Query Frame = 1 

Query: 1  MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYLNCLKTSGHQSEKCRHLSKKYL 60
          MSAGG+FGGNRGLRPVPPEKGVFPLDHMHLCD+EKKEYLNCLK++GH+SE+CRHLSKKYL
Sbjct: 1  MSAGGAFGGNRGLRPVPPEKGVFPLDHMHLCDVEKKEYLNCLKSAGHKSEECRHLSKKYL 60

Query: 61 QCRMEKNLMAKQDMAELGFG-NLSQPSLSGDKLEQ 95
          +CRMEKNLMAKQDM+ELGFG N+   + S +K EQ
Sbjct: 61 ECRMEKNLMAKQDMSELGFGKNVDAGTKSEEKTEQ 95

The following BLAST results are available for this feature:
BLAST of CmoCh08G006800 vs. Swiss-Prot
Match NameE-valueIdentityDescription
COX19_BOVIN1.1e-1443.90Cytochrome c oxidase assembly protein COX19 OS=Bos taurus GN=COX19 PE=3 SV=1[more]
COX19_USTMA1.4e-1448.00Cytochrome c oxidase assembly protein COX19 OS=Ustilago maydis (strain 521 / FGS... [more]
COX19_CRYNB1.4e-1449.32Cytochrome c oxidase assembly protein COX19 OS=Cryptococcus neoformans var. neof... [more]
COX19_CRYNJ1.4e-1449.32Cytochrome c oxidase assembly protein COX19 OS=Cryptococcus neoformans var. neof... [more]
COX19_SCHPO3.2e-1447.78Cytochrome c oxidase assembly protein cox19, mitochondrial OS=Schizosaccharomyce... [more]
BLAST of CmoCh08G006800 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0V0GNZ6_SOLCH1.7e-3882.11Putative cytochrome c oxidase assembly protein COX19-like OS=Solanum chacoense P... [more]
M1CIA6_SOLTU3.8e-3880.85Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400026453 PE=4 SV=1[more]
K4DFC6_SOLLC3.8e-3880.85Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1[more]
M0ZRG9_SOLTU4.9e-3881.05Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG402002538 PE=4 SV=1[more]
A0A0V0H7V2_SOLCH8.4e-3880.85Putative cytochrome c oxidase assembly protein COX19-like OS=Solanum chacoense P... [more]
BLAST of CmoCh08G006800 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G69750.12.2e-3774.73 cytochrome c oxidase 19-2[more]
AT1G66590.21.1e-3675.28 cytochrome c oxidase 19-1[more]
BLAST of CmoCh08G006800 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449448014|ref|XP_004141761.1|3.5e-4592.63PREDICTED: cytochrome c oxidase assembly protein COX19-like [Cucumis sativus][more]
gi|659124474|ref|XP_008462179.1|1.3e-4491.58PREDICTED: cytochrome c oxidase assembly protein COX19-like [Cucumis melo][more]
gi|565387355|ref|XP_006359466.1|5.4e-3880.85PREDICTED: cytochrome c oxidase assembly protein COX19-like [Solanum tuberosum][more]
gi|460413979|ref|XP_004252352.1|5.4e-3880.85PREDICTED: cytochrome c oxidase assembly protein COX19-like isoform X1 [Solanum ... [more]
gi|971542843|ref|XP_015162263.1|7.1e-3881.05PREDICTED: cytochrome c oxidase assembly protein COX19-like isoform X2 [Solanum ... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR009069Cys_alpha_HP_mot_SF
IPR010625CHCH
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh08G006800.1CmoCh08G006800.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009069Cysteine alpha-hairpin motif superfamilyunknownSSF47072Cysteine alpha-hairpin motifcoord: 27..63
score: 6.5
IPR010625CHCHPFAMPF06747CHCHcoord: 31..65
score: 2.
NoneNo IPR availablePANTHERPTHR21107FAMILY NOT NAMEDcoord: 1..81
score: 3.5

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmoCh08G006800CmaCh08G007160Cucurbita maxima (Rimu)cmacmoB912
CmoCh08G006800Cp4.1LG17g05560Cucurbita pepo (Zucchini)cmocpeB853
CmoCh08G006800Carg18780Silver-seed gourdcarcmoB1018
CmoCh08G006800Carg09507Silver-seed gourdcarcmoB1379
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh08G006800Cucurbita moschata (Rifu)cmocmoB134
CmoCh08G006800Cucurbita moschata (Rifu)cmocmoB234
CmoCh08G006800Cucurbita moschata (Rifu)cmocmoB320
CmoCh08G006800Cucurbita moschata (Rifu)cmocmoB379
CmoCh08G006800Cucumber (Gy14) v1cgycmoB0989
CmoCh08G006800Cucurbita maxima (Rimu)cmacmoB280
CmoCh08G006800Cucurbita maxima (Rimu)cmacmoB375
CmoCh08G006800Cucurbita maxima (Rimu)cmacmoB491
CmoCh08G006800Wild cucumber (PI 183967)cmocpiB890
CmoCh08G006800Wild cucumber (PI 183967)cmocpiB914
CmoCh08G006800Cucumber (Chinese Long) v2cmocuB901
CmoCh08G006800Melon (DHL92) v3.5.1cmomeB811
CmoCh08G006800Melon (DHL92) v3.5.1cmomeB823
CmoCh08G006800Watermelon (Charleston Gray)cmowcgB787
CmoCh08G006800Watermelon (Charleston Gray)cmowcgB805
CmoCh08G006800Watermelon (97103) v1cmowmB845
CmoCh08G006800Watermelon (97103) v1cmowmB855
CmoCh08G006800Cucurbita pepo (Zucchini)cmocpeB839
CmoCh08G006800Cucurbita pepo (Zucchini)cmocpeB854
CmoCh08G006800Cucurbita pepo (Zucchini)cmocpeB863
CmoCh08G006800Bottle gourd (USVL1VR-Ls)cmolsiB810
CmoCh08G006800Bottle gourd (USVL1VR-Ls)cmolsiB829
CmoCh08G006800Cucumber (Gy14) v2cgybcmoB429
CmoCh08G006800Cucumber (Gy14) v2cgybcmoB956
CmoCh08G006800Melon (DHL92) v3.6.1cmomedB914
CmoCh08G006800Melon (DHL92) v3.6.1cmomedB930
CmoCh08G006800Silver-seed gourdcarcmoB0169
CmoCh08G006800Silver-seed gourdcarcmoB0180
CmoCh08G006800Silver-seed gourdcarcmoB0289
CmoCh08G006800Cucumber (Chinese Long) v3cmocucB1042
CmoCh08G006800Cucumber (Chinese Long) v3cmocucB1067
CmoCh08G006800Watermelon (97103) v2cmowmbB895
CmoCh08G006800Watermelon (97103) v2cmowmbB902
CmoCh08G006800Watermelon (97103) v2cmowmbB918
CmoCh08G006800Wax gourdcmowgoB1108
CmoCh08G006800Wax gourdcmowgoB1119