CmoCh08G004440 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: CDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGACCCGACACCACCGCACGTTGAACCCTCCGCCGACTCCGGCAAGGCCAAGAAGAAAAGTGGCGGAGTTATGAAGATCTTCAAGGTTGCACTCTTCATGCTCCGCCGTCGGTCCAACAAATCGAAGGCAACCGTCGACACGGGCTCGGATAAGAGCGTGTGGCGGCGGTTGGTGGGCTCAATGCGCCCTCTCCACGTCCAAGGAAATGAATCCCCTCCCATGTCATTGCCTCCATTGAAATCAAAGAAGAATTTAGAGGAGTTGCCAACGACATGGTCATTATCGCCATCATCACCATCATCGTCGTTGTCGTTTACTCGTACTTCGAGGTCCTCTTCTTTTGGCACAAGTAAGTACGCTTCTGCTATCAATCTTCAAGAACTCGATGGTAGAAACGATGACGACAATGACAAAAATGTCATTGAAGACGACAATGGAGGCGATGAGATGATCGATGCAAAGGCAGAGGAGTTCATCGCGCAATTTTACGAGCAAATGAGGCGTCAACATCGCAACGATTGA ATGGACCCGACACCACCGCACGTTGAACCCTCCGCCGACTCCGGCAAGGCCAAGAAGAAAAGTGGCGGAGTTATGAAGATCTTCAAGGTTGCACTCTTCATGCTCCGCCGTCGGTCCAACAAATCGAAGGCAACCGTCGACACGGGCTCGGATAAGAGCGTGTGGCGGCGGTTGGTGGGCTCAATGCGCCCTCTCCACGTCCAAGGAAATGAATCCCCTCCCATGTCATTGCCTCCATTGAAATCAAAGAAGAATTTAGAGGAGTTGCCAACGACATGGTCATTATCGCCATCATCACCATCATCGTCGTTGTCGTTTACTCGTACTTCGAGGTCCTCTTCTTTTGGCACAAGTAAGTACGCTTCTGCTATCAATCTTCAAGAACTCGATGGTAGAAACGATGACGACAATGACAAAAATGTCATTGAAGACGACAATGGAGGCGATGAGATGATCGATGCAAAGGCAGAGGAGTTCATCGCGCAATTTTACGAGCAAATGAGGCGTCAACATCGCAACGATTGA ATGGACCCGACACCACCGCACGTTGAACCCTCCGCCGACTCCGGCAAGGCCAAGAAGAAAAGTGGCGGAGTTATGAAGATCTTCAAGGTTGCACTCTTCATGCTCCGCCGTCGGTCCAACAAATCGAAGGCAACCGTCGACACGGGCTCGGATAAGAGCGTGTGGCGGCGGTTGGTGGGCTCAATGCGCCCTCTCCACGTCCAAGGAAATGAATCCCCTCCCATGTCATTGCCTCCATTGAAATCAAAGAAGAATTTAGAGGAGTTGCCAACGACATGGTCATTATCGCCATCATCACCATCATCGTCGTTGTCGTTTACTCGTACTTCGAGGTCCTCTTCTTTTGGCACAAGTAAGTACGCTTCTGCTATCAATCTTCAAGAACTCGATGGTAGAAACGATGACGACAATGACAAAAATGTCATTGAAGACGACAATGGAGGCGATGAGATGATCGATGCAAAGGCAGAGGAGTTCATCGCGCAATTTTACGAGCAAATGAGGCGTCAACATCGCAACGATTGA
BLAST of CmoCh08G004440 vs. TrEMBL
Match: A0A0A0KB64_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G407000 PE=4 SV=1) HSP 1 Score: 184.5 bits (467), Expect = 1.1e-43 Identity = 111/181 (61.33%), Postives = 132/181 (72.93%), Query Frame = 1
BLAST of CmoCh08G004440 vs. TrEMBL
Match: W9RL15_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_007455 PE=4 SV=1) HSP 1 Score: 115.2 bits (287), Expect = 8.2e-23 Identity = 85/198 (42.93%), Postives = 114/198 (57.58%), Query Frame = 1
BLAST of CmoCh08G004440 vs. TrEMBL
Match: A0A0B2PHG1_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_024564 PE=4 SV=1) HSP 1 Score: 110.2 bits (274), Expect = 2.6e-21 Identity = 76/172 (44.19%), Postives = 102/172 (59.30%), Query Frame = 1
BLAST of CmoCh08G004440 vs. TrEMBL
Match: K7K5X3_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_02G014400 PE=4 SV=1) HSP 1 Score: 110.2 bits (274), Expect = 2.6e-21 Identity = 76/172 (44.19%), Postives = 102/172 (59.30%), Query Frame = 1
BLAST of CmoCh08G004440 vs. TrEMBL
Match: A0A0B2RFI6_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_037690 PE=4 SV=1) HSP 1 Score: 104.8 bits (260), Expect = 1.1e-19 Identity = 77/168 (45.83%), Postives = 104/168 (61.90%), Query Frame = 1
BLAST of CmoCh08G004440 vs. TAIR10
Match: AT4G02160.1 (AT4G02160.1 unknown protein) HSP 1 Score: 72.4 bits (176), Expect = 3.1e-13 Identity = 67/162 (41.36%), Postives = 88/162 (54.32%), Query Frame = 1
BLAST of CmoCh08G004440 vs. TAIR10
Match: AT5G61710.1 (AT5G61710.1 unknown protein) HSP 1 Score: 71.6 bits (174), Expect = 5.3e-13 Identity = 60/158 (37.97%), Postives = 82/158 (51.90%), Query Frame = 1
BLAST of CmoCh08G004440 vs. NCBI nr
Match: gi|778728194|ref|XP_011659385.1| (PREDICTED: uncharacterized protein LOC105436176 [Cucumis sativus]) HSP 1 Score: 184.5 bits (467), Expect = 1.6e-43 Identity = 111/181 (61.33%), Postives = 132/181 (72.93%), Query Frame = 1
BLAST of CmoCh08G004440 vs. NCBI nr
Match: gi|659101260|ref|XP_008451512.1| (PREDICTED: uncharacterized protein LOC103492774 [Cucumis melo]) HSP 1 Score: 165.6 bits (418), Expect = 7.6e-38 Identity = 104/173 (60.12%), Postives = 125/173 (72.25%), Query Frame = 1
BLAST of CmoCh08G004440 vs. NCBI nr
Match: gi|703125764|ref|XP_010103386.1| (hypothetical protein L484_007455 [Morus notabilis]) HSP 1 Score: 115.2 bits (287), Expect = 1.2e-22 Identity = 85/198 (42.93%), Postives = 114/198 (57.58%), Query Frame = 1
BLAST of CmoCh08G004440 vs. NCBI nr
Match: gi|356501883|ref|XP_003519753.1| (PREDICTED: uncharacterized protein LOC100800206 [Glycine max]) HSP 1 Score: 110.2 bits (274), Expect = 3.8e-21 Identity = 76/172 (44.19%), Postives = 102/172 (59.30%), Query Frame = 1
BLAST of CmoCh08G004440 vs. NCBI nr
Match: gi|734338040|gb|KHN08655.1| (hypothetical protein glysoja_024564 [Glycine soja]) HSP 1 Score: 110.2 bits (274), Expect = 3.8e-21 Identity = 76/172 (44.19%), Postives = 102/172 (59.30%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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