CSPI07G17970 (gene) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CATTCCCCTCTTTCTTCTCTTAAGTTTTAACTTCTTCTTTGCCTTTGCTCCGGGAGAGGCCCCCCACAAAACCTTTCTTACTTGCAAACAAAGCTTATATGGACACGAACTCACAACCAGTCAAACCCAACTCCAGCTCCGGCAATACAAAAACCACAAGCCGCAACGGCGCCGTGAAAATTTTCAAGGTTGCGCTCTTCATGATCCGTCGTCGTCACTCCAAGAAACCAAAAGCGTCTGTCGACATGGGCGCTGATAAGGGCTTGTGGCGGCGGCTGTTGGGTTCCATACGCCCTCTCCACATCCATGGGAACGAACCACCACCAACTGCTGCTAGAGATATGTCGTTGCCTCCGTCGAAACCAAAGGAAGATTTCGAGGAGGCACTAATGCCATTGCCGTCACATTCCACTTCACCATCATCGTCGTCACTTTCTCGTACGTCGAGGTCATCTTCTTTTGGCACAAGCCAATACGCCTCTGCCAGCAGCCTTCAAGAATTTGACGATAATACGGATGGAGACGATGATGAAAATGAGATTCATGAGGACAATGGAGGCGACGAGATGATTGATGCGAAAGCAGAAGAGTTTATTGCACAATTTTATGAGCAAATGAGGCGTCAACGCTACAATAACTATTAAGATGGAAATAATTAAGAAGAAATGATGTGTTAATCAAATATCTCTACAAGAGGACGATGTAGAGATGGAGTATGCATAAATCTTATTATGGATTCAAATTATTGTGTTGTTTTTAATTTCTTATTTGTTTTGAGTCAAAAGAGACTAGAGTTTCAGATAGAATACTTCATTCATCACTCCTCAAAGTCGATGACAAATAAAGGAAAAAGAAAACACAATACTTTTTTTGTTATATTTATTTTTTTAAGTTTTGATACGACTCAATGTATTTTTGAGGCTGGTTGTAATGGGTCACC ATGGACACGAACTCACAACCAGTCAAACCCAACTCCAGCTCCGGCAATACAAAAACCACAAGCCGCAACGGCGCCGTGAAAATTTTCAAGGTTGCGCTCTTCATGATCCGTCGTCGTCACTCCAAGAAACCAAAAGCGTCTGTCGACATGGGCGCTGATAAGGGCTTGTGGCGGCGGCTGTTGGGTTCCATACGCCCTCTCCACATCCATGGGAACGAACCACCACCAACTGCTGCTAGAGATATGTCGTTGCCTCCGTCGAAACCAAAGGAAGATTTCGAGGAGGCACTAATGCCATTGCCGTCACATTCCACTTCACCATCATCGTCGTCACTTTCTCGTACGTCGAGGTCATCTTCTTTTGGCACAAGCCAATACGCCTCTGCCAGCAGCCTTCAAGAATTTGACGATAATACGGATGGAGACGATGATGAAAATGAGATTCATGAGGACAATGGAGGCGACGAGATGATTGATGCGAAAGCAGAAGAGTTTATTGCACAATTTTATGAGCAAATGAGGCGTCAACGCTACAATAACTATTAA ATGGACACGAACTCACAACCAGTCAAACCCAACTCCAGCTCCGGCAATACAAAAACCACAAGCCGCAACGGCGCCGTGAAAATTTTCAAGGTTGCGCTCTTCATGATCCGTCGTCGTCACTCCAAGAAACCAAAAGCGTCTGTCGACATGGGCGCTGATAAGGGCTTGTGGCGGCGGCTGTTGGGTTCCATACGCCCTCTCCACATCCATGGGAACGAACCACCACCAACTGCTGCTAGAGATATGTCGTTGCCTCCGTCGAAACCAAAGGAAGATTTCGAGGAGGCACTAATGCCATTGCCGTCACATTCCACTTCACCATCATCGTCGTCACTTTCTCGTACGTCGAGGTCATCTTCTTTTGGCACAAGCCAATACGCCTCTGCCAGCAGCCTTCAAGAATTTGACGATAATACGGATGGAGACGATGATGAAAATGAGATTCATGAGGACAATGGAGGCGACGAGATGATTGATGCGAAAGCAGAAGAGTTTATTGCACAATTTTATGAGCAAATGAGGCGTCAACGCTACAATAACTATTAA
BLAST of CSPI07G17970 vs. TrEMBL
Match: A0A0A0KB64_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G407000 PE=4 SV=1) HSP 1 Score: 345.1 bits (884), Expect = 5.1e-92 Identity = 181/181 (100.00%), Postives = 181/181 (100.00%), Query Frame = 1
BLAST of CSPI07G17970 vs. TrEMBL
Match: W9RL15_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_007455 PE=4 SV=1) HSP 1 Score: 98.2 bits (243), Expect = 1.1e-17 Identity = 74/187 (39.57%), Postives = 109/187 (58.29%), Query Frame = 1
BLAST of CSPI07G17970 vs. TrEMBL
Match: F6HZ85_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0005g01130 PE=4 SV=1) HSP 1 Score: 93.2 bits (230), Expect = 3.5e-16 Identity = 68/165 (41.21%), Postives = 99/165 (60.00%), Query Frame = 1
BLAST of CSPI07G17970 vs. TrEMBL
Match: A0A059AXK3_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_H01069 PE=4 SV=1) HSP 1 Score: 91.3 bits (225), Expect = 1.3e-15 Identity = 71/182 (39.01%), Postives = 105/182 (57.69%), Query Frame = 1
BLAST of CSPI07G17970 vs. TrEMBL
Match: V4KJ52_EUTSA (Uncharacterized protein OS=Eutrema salsugineum GN=EUTSA_v10028992mg PE=4 SV=1) HSP 1 Score: 86.3 bits (212), Expect = 4.3e-14 Identity = 68/166 (40.96%), Postives = 89/166 (53.61%), Query Frame = 1
BLAST of CSPI07G17970 vs. TAIR10
Match: AT4G02160.1 (AT4G02160.1 unknown protein) HSP 1 Score: 78.2 bits (191), Expect = 5.9e-15 Identity = 64/162 (39.51%), Postives = 82/162 (50.62%), Query Frame = 1
BLAST of CSPI07G17970 vs. TAIR10
Match: AT5G61710.1 (AT5G61710.1 unknown protein) HSP 1 Score: 53.5 bits (127), Expect = 1.6e-07 Identity = 55/160 (34.38%), Postives = 78/160 (48.75%), Query Frame = 1
BLAST of CSPI07G17970 vs. NCBI nr
Match: gi|778728194|ref|XP_011659385.1| (PREDICTED: uncharacterized protein LOC105436176 [Cucumis sativus]) HSP 1 Score: 345.1 bits (884), Expect = 7.3e-92 Identity = 181/181 (100.00%), Postives = 181/181 (100.00%), Query Frame = 1
BLAST of CSPI07G17970 vs. NCBI nr
Match: gi|659101260|ref|XP_008451512.1| (PREDICTED: uncharacterized protein LOC103492774 [Cucumis melo]) HSP 1 Score: 265.0 bits (676), Expect = 9.6e-68 Identity = 152/184 (82.61%), Postives = 160/184 (86.96%), Query Frame = 1
BLAST of CSPI07G17970 vs. NCBI nr
Match: gi|703125764|ref|XP_010103386.1| (hypothetical protein L484_007455 [Morus notabilis]) HSP 1 Score: 98.2 bits (243), Expect = 1.6e-17 Identity = 74/187 (39.57%), Postives = 109/187 (58.29%), Query Frame = 1
BLAST of CSPI07G17970 vs. NCBI nr
Match: gi|720010858|ref|XP_010259379.1| (PREDICTED: uncharacterized protein LOC104598838 [Nelumbo nucifera]) HSP 1 Score: 94.0 bits (232), Expect = 2.9e-16 Identity = 72/182 (39.56%), Postives = 105/182 (57.69%), Query Frame = 1
BLAST of CSPI07G17970 vs. NCBI nr
Match: gi|731395600|ref|XP_010652228.1| (PREDICTED: uncharacterized protein LOC104879792 [Vitis vinifera]) HSP 1 Score: 93.2 bits (230), Expect = 5.0e-16 Identity = 68/165 (41.21%), Postives = 99/165 (60.00%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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