CmoCh08G002760 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh08G002760
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	(Ribonuclease t2, putative) (3.1.27.1)
Location	Cmo_Chr08 : 1721052 .. 1726636 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGCCAATTGGATTACGTTACGCATTTATTTGTCATGGGGAGCGATCCCCAAAATCAAGCCATTCCCATGGCGATTCTGTTCATCTTTCTTCTTCAATTCAGCCTATCTGTTGCATCAACTTCCTTGAAAGAGGCTTCCGATGCGGTAATTTTACAGAACCAGGGTGGACGAAAGCAGAGAGAATTTGATTACTTCGTTTTGGCGCTGCAATGGCCTGGTACTATCTGCAAGGGCACTCGCCACTGTTGTTCCTCCAATGCATGCTGTAATAGGTGACTGCTTCTGGCTCGCTCTTTTTCAGATTGCTTAATCAATCGTTTCTTTCGTTTGATGATTCTGCTTAGTAACTGCAGTAGTTATTAGCTCATAATTTTCCATTTCGCCATGCTGCTTGATGTGAAAAAACTGTAGCATCTTCCGCCTTCTTTGGGCTCAATTGTTGGATATTATGTTGCTCGCTGATAGGGGATCAAAGTGAAATAAGCATGCTATTTGCTGATTTCCGTCGAGAACCTGCTTTCAGCAGTGTTACGAATCGCTTTCCGTAAGAAGAGAAAGGCGTTTATGAGATTATTTCTTGGTCTTATAAGAATTTTGGACTGCTTATATATAGTACTTAGGTTAAACTTCCAGTATAAATCCCTTGCAGCTAAGGCTTTTTTTTTTTTTTTTTTTTTTTTTGCCGAACTATGAACTTCATTAATACCGTAAAGAATCATAGTTGTAGCAGTAACATGGACTAATTCTCACATCTTTTTCCATCAAGATCTGCATGATACCGTTTATGAACAAGTACAGTAGTCTAGTAGTACCTTTGCCACCACTGGTGCAGTCAAAGAGAAAGAAACAATTGCAAAGAAGGGCAGGAATGTTCAACATTGACGGAGAAGAGGAGATCGAATATGAGAGGTCATACCAAAATAAAAAATTATGCTTCCAAATTTTTCCAATCAATTTCAATTCTTTAAGATAAACCATCTGGACAAGTTAGATTGTGATACCTTGTAATAAACAATAAATGAAAAACTTGAAGTTTTTTTTATTGTCCTTATTCTGAATTGGTTTAAACTCCTTTCAGAATCTGGCGTAACTTGGGTTTGTTTGAAAGATAAAACCTGCATTTAGAGAGGGGGGTGGGATTAAGCTATAATATTGCAATTAGGCAATTGGGTATTTTGGCATTGAATGAATTACAATGGTCACGACCCCAAAAATTAAATGTGAAAAGGTTATTGGAGACCATTGATAGAACACAAAATTTAGAGTTTTGGTTGTGAAAGTTTTGCCTATATGTCGTATTCCAATATTTTGTTGAGTGTTCTTTTGAATTCTGTGGATATTCTTTTACACTGTTCATTAAAACTTACATTCATTTATCTCTTCTTTGCTAGATCTGGTGGTTTCGCTGAGTTTACAATTCGTAAGTTGAAGCTACAATTGCATTTGTTCCACAGTTCTGAATTATGAAGCACAGACAACATGACACAGACGTGGAAATACATCATTTTCTATAAAACTAGAATATAGATATTATAACTGTACATTTTTAAAATATATGTTATCTTAATATCTTCATACTTTTCAATCATTTTCACATTAAAAATATTTTTCAGTCCCTGATACTTTTACATTTCAAAGGTATTTTGAAACAAGATAATTCAAGAGAAGTTGAAGACAACATTCTAATGGTGCAATGCACTAACTTACAACAAGATATTTGGATTACTCTATAACCAAATTGACATTCTGTGAATGATTCCATATTTCGTAAAAAAAAAAATTTGAAATTGGTTTAGGGTTTAGGGTTTAGGGTTCATGCATTAATATAGTTAAAAATAGTTTGATGCAATATGCTTAGAAGTTTATTATTTTGCTCTATATTTATTTTTATGTTGATTGATTTTTTCAAACAAAATTGAATAAGTAAAAGATTCGACGCTAGTATTGCATGTATCTAATTTGTTCATCAAGTGTATAACACATCTAATTTGTTAACTAGCCATCATAAAATATAGAAGAGTTGGAGTGTTCAATACATGTAGGGTTACTGAACTGTTTATCTGTACTTCACATGTTCCATTTCTCTTCGGTACCTGTTCATTTTTATTATTTATTATTTTTACTGGAAATATCAATTAGGGTCCCTTTTTTTTAGTCAGTTCCCTAAAAATAAACATAGGAGACCGTTCCTTTGTTTGAGGATCTTTTTGTTTATAGAATAAGGGGTCACTTTTGTTTGATTGTGCATTGAATTTATAACTTCTTCCTCTTAATAGATGGTTTGTGGCCTGATTATAATGATGGAACTTGGCCTTCATGTTGCACTGGAAAAGAATTTGATGAGAAGGAGGTACGTTTTTATTAAAATTAGGTTGTTGATATTAATGAAATGATCCAAAGTTCCCTTAGGATCTAGAGAAGGAGGTACGTTTTTATTAAAATTAGGCTGTTGATATTCATTAAATGATCTAGAGTTCCCTTAGGATACAAACTATTGGTATCAAAAAGTGTTAAGAATGAGAAATAGAAATAGAATTGGGATCGAAAGTATGATCTTCATTCAGGTTTACCACGTTTAAATAGGATACAAACTATCAACTAATACCTAAAAATAGAAAAATTATATATCTAATTAAATCTGGTAAATAAATAAAATATACGGTTAATCAAATCTATACTAACAACTCCCAAAATATCTAAGATATATTCTAACTAATTATCACGGCAAAATATCCTCTTAATAAAAAGGTATATAATCAGTGCAAAAAATGGATAAGGAGGTTCAATTAGGATCTAGAGAAGTTCCCTTCTTTCAAATGATCGAATAGCTGTAACTATGCTAGGATTTTGGTTTTGTTCCAAACCTTGTAATCCTCAAAAGATTGAACCAATAATAACTGGGATGGAAAGCATTACTGGAAGTTGAAGAGCTAAAACAGAGCACTTTCAGCCTGATTTTCATATGTTACTGTTGGTTTTACTTTGATCGTTGTATCATTTGCTTTGCTCTTGCAATTGATACATTGTTCTGTTTAAGTCATCCTTTTAACATCCTGCGTCATTTGATCTTCCAGATTCATACCTTACTTGAACCCATGAAGAAATATTGGTCATCTTTGAGTTGTAGTTCACCGAAAACTTGCCATGGTGCAAAGGGATCATTTTGGGCTCATGAGGTGACCGTTGCTAGTACAACATATGTTTTGTTTTAATTTGACTGATTATACCCAAGTTTTAGCTGATGATTTTTTCCCCCTTCTCTTTTTGCTCCTATGATGGCTGAATTGGCTTCTGCATTTGGTAGTGGGGTAATGATCCTTGGCTTCTCTCACTTGGATACTATAATTTATATTCTGGAATACATTGGTCATGGGCTTTATTTCTTACATTGAATTTTTCTGATTGGCAAAGGATAGATTTCTAGGTTTCTCTTTTGCACTCTCTCTACTCTAAAATGTTAATTTGTCATGATATTTGACAAATATCTTCACTTTTAAAGACTTTCACATCTAGGTCATGTGTTCAATGCATTGCATAATGATTTCCTATACAAAGATGTATTTTTCTTTTTATCATATACCTTGTGCCGATGCTAGTCAAATTTGATGGTGACCTTCATTATTTACGTATAGTTTGTCCTTTATTGAATGTGACAACGTATCAACTTTGTTGATGTTACTGCTTTGATGTCCATATTGGAAGCAAAGCATATTAATGTCCTTCCCAGTTCCCATGCTTTGGTTTTTCATATTAAATTTTTGTTACATGCAGAGAAGCATGGAACTTGTTCTTCTCCAGTAGCTCGTGATGAATATGGTTACTTTTTAACTACTCTCAACGTCTATTTCAAATACAATGTCACAGTAAGTTTACAACTGATGTTACACTTCTCTATTAGCCCTAAAGTCAATAGATCAGACTAAGCTGCTTGCAGAAAATAATATAGCTTGCAGTTTAGTTCCATATTGATTTGCTACTGTTGATTTTGTTTTCCTTAATCGATAAATGTTACTAATGACTTTCCTATTTCCTTTGCAGATTAGTTTCATATTTTTCAGGCGGCTTTATACAACTTAAGTTTTCTAGATTGTTTAAGCTGTGGTAGATGCTATTTAATGGTTAATGGCTAGGTAGATTGTAGAGAATAATTTAATGGATTGAGAATAACCAGATAAGTTTTGAGGATTTTCTTGACAAATAGGGTTTTATAAAACTTAAATTTTGGGGTTGTAGAATACATTTTAGCAAAGCAGCATAGGTTAGTGGATAATACTGCCTTTTACTATTCTAAAGGTCAATGATTTGATCTCCCACTCCTACAATTGTGGAACTAAAAATAAAAAATAAAAGCAATGTATTTAACTACTGAGATCCATCTATGGAAATTGAAATAATTAAATTTCTATTTCATTGCAGTAGCTGGCCTATAAGTGGTTAATTCTTTACACCAGTCCAGAAATCCTGATGGAGCATTTGATTTTTTGCGGACAAACTTGTTTTTGAAGTTCGCAATTTTACTCGTATGGTCTAACTAATAAATCTTTCATACCTTCAAATCTGATATAAAAGAGAGATCTGAACCATTTCAAGGAATTTTAGAGTTCCCAGTTCTTAATATTTAGGTTACTCCATATAGTATATGGGTGTGTATATTTAAAAGCTTTATTAGCTATTCATTTGCCTTGGAATCAGTTTGGTTACTAATGAACATCTCATGTCCCAGAAAGTTCTGAATGACGCTGGATATGTACCTTCAAATACTGAGAAATATCCTCTGGGAGGAATCATTTCAGCAGTTGAGAATGCTTTTCATGCCACCCCTTTGTTGGTCTGCTCAAAGGGTGCAGTGGAGGAACTTCGCTTATGTTTCTACAAGGATTTCAAGGTTTTTTTTTCCTTCTTAATTTTTGCTGATTCGGTTTGAAATTGAATTTCTTAACCGAAAGAAACGAAAGGAAACTTCAAAGTTGATGCACCTCTTGGATAGGATTAAATTTTGGACAATTCCTTATGTTGATGCTTCTTGTTCTAATTATCCTTTTCGGGTAGGTTTAAGCCACTTTTACAAAGAACACTCGACATATATGATTATACTTTTACATAAAGCCTGATCTTCCGAACTTCATGGGATATATGTTGGATAACTCAAATGATCCTTTTGCTTTATTGCAGCCTCGCGACTGTGTTCCGACCGACTCACAGAATGCAATCGTTTCTTCGAAAATCTCATGTCCCAAATATGTCAGCTTACCCTCATATGAGCCAGGAGGCAAGATTTTCGAGTTCACTGATTCCAATTGGCAATATCCAAATGCTTAATTTTCAGTCCTTTGAAAACATAATGCATACTATAATATCTCTGTTGAGATATATATGAATCTGTAATGCATTATGTTTCTTATAGTTTGCCTTATATAGAAGTCAACAAGAGGATTGGAAGTTTGCAGACAATGTAATTTTAATATTGATCTTGGTTTCTAATATCAAATTGAAAAATGTTACCCTCATTTCTTCGTAAGGAGGAGGGTTGAGATTCTAGAATGAATTTAACTTGCCCCAGTTTCAGAATAATGATACTACCAGAT

mRNA sequence

TGCCAATTGGATTACGTTACGCATTTATTTGTCATGGGGAGCGATCCCCAAAATCAAGCCATTCCCATGGCGATTCTGTTCATCTTTCTTCTTCAATTCAGCCTATCTGTTGCATCAACTTCCTTGAAAGAGGCTTCCGATGCGGTAATTTTACAGAACCAGGGTGGACGAAAGCAGAGAGAATTTGATTACTTCGTTTTGGCGCTGCAATGGCCTGGTACTATCTGCAAGGGCACTCGCCACTGTTGTTCCTCCAATGCATGCTGTAATAGATCTGGTGGTTTCGCTGAGTTTACAATTCATGGTTTGTGGCCTGATTATAATGATGGAACTTGGCCTTCATGTTGCACTGGAAAAGAATTTGATGAGAAGGAGATTCATACCTTACTTGAACCCATGAAGAAATATTGGTCATCTTTGAGTTGTAGTTCACCGAAAACTTGCCATGGTGCAAAGGGATCATTTTGGGCTCATGAGGTGACCGTTGCTAAGAAGCATGGAACTTGTTCTTCTCCAGTAGCTCGTGATGAATATGGTTACTTTTTAACTACTCTCAACGTCTATTTCAAATACAATGTCACAAAAGTTCTGAATGACGCTGGATATGTACCTTCAAATACTGAGAAATATCCTCTGGGAGGAATCATTTCAGCAGTTGAGAATGCTTTTCATGCCACCCCTTTGTTGGTCTGCTCAAAGGGTGCAGTGGAGGAACTTCGCTTATGTTTCTACAAGGATTTCAAGCCTCGCGACTGTGTTCCGACCGACTCACAGAATGCAATCGTTTCTTCGAAAATCTCATGTCCCAAATATGTCAGCTTACCCTCATATGAGCCAGGAGGCAAGATTTTCGAGTTCACTGATTCCAATTGGCAATATCCAAATGCTTAATTTTCAGTCCTTTGAAAACATAATGCATACTATAATATCTCTGTTGAGATATATATGAATCTGTAATGCATTATGTTTCTTATAGTTTGCCTTATATAGAAGTCAACAAGAGGATTGGAAGTTTGCAGACAATGTAATTTTAATATTGATCTTGGTTTCTAATATCAAATTGAAAAATGTTACCCTCATTTCTTCGTAAGGAGGAGGGTTGAGATTCTAGAATGAATTTAACTTGCCCCAGTTTCAGAATAATGATACTACCAGAT

Coding sequence (CDS)

ATGGGGAGCGATCCCCAAAATCAAGCCATTCCCATGGCGATTCTGTTCATCTTTCTTCTTCAATTCAGCCTATCTGTTGCATCAACTTCCTTGAAAGAGGCTTCCGATGCGGTAATTTTACAGAACCAGGGTGGACGAAAGCAGAGAGAATTTGATTACTTCGTTTTGGCGCTGCAATGGCCTGGTACTATCTGCAAGGGCACTCGCCACTGTTGTTCCTCCAATGCATGCTGTAATAGATCTGGTGGTTTCGCTGAGTTTACAATTCATGGTTTGTGGCCTGATTATAATGATGGAACTTGGCCTTCATGTTGCACTGGAAAAGAATTTGATGAGAAGGAGATTCATACCTTACTTGAACCCATGAAGAAATATTGGTCATCTTTGAGTTGTAGTTCACCGAAAACTTGCCATGGTGCAAAGGGATCATTTTGGGCTCATGAGGTGACCGTTGCTAAGAAGCATGGAACTTGTTCTTCTCCAGTAGCTCGTGATGAATATGGTTACTTTTTAACTACTCTCAACGTCTATTTCAAATACAATGTCACAAAAGTTCTGAATGACGCTGGATATGTACCTTCAAATACTGAGAAATATCCTCTGGGAGGAATCATTTCAGCAGTTGAGAATGCTTTTCATGCCACCCCTTTGTTGGTCTGCTCAAAGGGTGCAGTGGAGGAACTTCGCTTATGTTTCTACAAGGATTTCAAGCCTCGCGACTGTGTTCCGACCGACTCACAGAATGCAATCGTTTCTTCGAAAATCTCATGTCCCAAATATGTCAGCTTACCCTCATATGAGCCAGGAGGCAAGATTTTCGAGTTCACTGATTCCAATTGGCAATATCCAAATGCTTAA

Homology

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BLAST of CmoCh08G002760 vs. Swiss-Prot
Match: RNS2_ARATH (Ribonuclease 2 OS=Arabidopsis thaliana GN=RNS2 PE=2 SV=1)

HSP 1 Score: 338.6 bits (867), Expect = 6.7e-92
Identity = 147/223 (65.92%), Postives = 176/223 (78.92%), Query Frame = 1


Query: 46  RKQREFDYFVLALQWPGTICKGTRHCCSSNACCNRSGGFAEFTIHGLWPDYNDGTWPSCC 105
           R QREFDYF L+LQWPGT C+GTRHCCS NACC  S    +FTIHGLWPDYNDG+WPSCC
Sbjct: 27  RSQREFDYFALSLQWPGTYCRGTRHCCSKNACCRGSDAPTQFTIHGLWPDYNDGSWPSCC 86

Query: 106 TGKEFDEKEIHTLLEPMKKYWSSLSCSSPKTCHGAKGSFWAHEVTVAKKHGTCSSPVARD 165
              +F EKEI TL++ ++KYW SLSC SP +C+G KGSFW HE    +KHGTCSSPV  D
Sbjct: 87  YRSDFKEKEISTLMDGLEKYWPSLSCGSPSSCNGGKGSFWGHE---WEKHGTCSSPVFHD 146

Query: 166 EYGYFLTTLNVYFKYNVTKVLNDAGYVPSNTEKYPLGGIISAVENAFHATPLLVCSKGAV 225
           EY YFLTTLN+Y K+NVT VL  AGYV SN+EKYPLGGI++A++NAFH TP +VC + A+
Sbjct: 147 EYNYFLTTLNLYLKHNVTDVLYQAGYVASNSEKYPLGGIVTAIQNAFHITPEVVCKRDAI 206

Query: 226 EELRLCFYKDFKPRDCVPTDSQNAIVSSKISCPKYVSLPSYEP 269
           +E+R+CFYKDFKPRDCV +      ++S+ SCPKYVSLP Y P
Sbjct: 207 DEIRICFYKDFKPRDCVGSQD----LTSRKSCPKYVSLPEYTP 242

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BLAST of CmoCh08G002760 vs. Swiss-Prot
Match: RNS1_ARATH (Ribonuclease 1 OS=Arabidopsis thaliana GN=RNS1 PE=1 SV=1)

HSP 1 Score: 126.3 bits (316), Expect = 5.2e-28
Identity = 79/212 (37.26%), Postives = 106/212 (50.00%), Query Frame = 1


Query: 12  MAILFIFLLQFSLSVASTSLKEASDAVILQNQGGRKQREFDYFVLALQWPGTICKGTRHC 71
           M IL   L   SL V   S+  AS +            +FD+F    QWPG+ C   + C
Sbjct: 1   MKILLASLCLISLLVILPSVFSASSS----------SEDFDFFYFVQQWPGSYCDTQKKC 60

Query: 72  CSSNACCNRSGGFAEFTIHGLWPDYNDGTWPS-CCTGKEFDEKEIHTLLEPMKKYWSSLS 131
           C  N+        A+F IHGLWP+Y DGT+PS C   K FD   I  LL  MKK W +L+
Sbjct: 61  CYPNS----GKPAADFGIHGLWPNYKDGTYPSNCDASKPFDSSTISDLLTSMKKSWPTLA 120

Query: 132 CSSPKTCHGAKGSFWAHEVTVAKKHGTCSSPVARDEYGYFLTTLNVYFKYNVTKVLNDAG 191
           C S     G+  +FW HE    +KHGTCS  V  D++ YF T LN+  K N+   L  AG
Sbjct: 121 CPS-----GSGEAFWEHE---WEKHGTCSESVI-DQHEYFQTALNLKQKTNLLGALTKAG 180

Query: 192 YVPSNTEKYPLGGIISAVENAFHATPLLVCSK 223
             P   + Y L  I  +++ +   TP + C++
Sbjct: 181 INPDG-KSYSLESIRDSIKESIGFTPWVECNR 188

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BLAST of CmoCh08G002760 vs. Swiss-Prot
Match: RNLX_SOLLC (Intracellular ribonuclease LX OS=Solanum lycopersicum GN=RNALX PE=1 SV=2)

HSP 1 Score: 122.5 bits (306), Expect = 7.6e-27
Identity = 75/224 (33.48%), Postives = 107/224 (47.77%), Query Frame = 1


Query: 49  REFDYFVLALQWPGTICKGTRHCCSSNACCNRSGGFAEFTIHGLWPDYNDGTWP-SCCTG 108
           ++FD+F    QWP + C   R CC             +F+IHGLWP+Y DG WP +C   
Sbjct: 26  QDFDFFYFVQQWPASYCDTRRSCCYPTT----GKPDEDFSIHGLWPNYKDGKWPQNCDRE 85

Query: 109 KEFDEKEIHTLLEPMKKYWSSLSCSSPKTCHGAKGSFWAHEVTVAKKHGTCSSPVARDEY 168
              DE E   L+  M+K W SL+C S     G K  FW+HE     KHGTCS   A +++
Sbjct: 86  SSLDESEFSDLISTMEKNWPSLACPS---SDGLK--FWSHEWL---KHGTCS---ALNQH 145

Query: 169 GYFLTTLNVYFKYNVTKVLNDAGYVPSNTEKYPLGGIISAVENAFHATPLLVCSKGAVEE 228
            YF T L+   K N+ + LN+AG  P N + Y +  I  A+E     TP + C+  +   
Sbjct: 146 AYFQTALDFKTKSNLLQNLNNAGIKPRNGDYYGVESIKKAIEKGVGHTPFIECNVDSQGN 205

Query: 229 LRLCFYKDFKPRDCVPTDSQNAIVSSKISCPKYVSLPSYEPGGK 272
            +L     ++   CV +           S  K++  P +  GGK
Sbjct: 206 HQL-----YQVYLCVDS-----------SASKFIDCPIFPHGGK 218

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BLAST of CmoCh08G002760 vs. Swiss-Prot
Match: RNLE_SOLLC (Extracellular ribonuclease LE OS=Solanum lycopersicum PE=1 SV=2)

HSP 1 Score: 118.2 bits (295), Expect = 1.4e-25
Identity = 71/224 (31.70%), Postives = 111/224 (49.55%), Query Frame = 1


Query: 49  REFDYFVLALQWPGTICKGTRHCCSSNACCNRSGGFAEFTIHGLWPDYNDGTWPS-CCTG 108
           ++FD+F    QWPG+ C   + CC            A+F IHGLWP+ NDGT+PS C   
Sbjct: 27  KDFDFFYFVQQWPGSYCDTKQSCCYPTT----GKPAADFGIHGLWPNNNDGTYPSNCDPN 86

Query: 109 KEFDEKEIHTLLEPMKKYWSSLSCSSPKTCHGAKGSFWAHEVTVAKKHGTCSSPVARDEY 168
             +D+ +I  L+  M++ W +L+C S     G+  +FW+HE    +KHGTC+  V  +++
Sbjct: 87  SPYDQSQISDLISSMQQNWPTLACPS-----GSGSTFWSHE---WEKHGTCAESVLTNQH 146

Query: 169 GYFLTTLNVYFKYNVTKVLNDAGYVPSNTEKYPLGGIISAVENAFHATPLLVCSKGAVEE 228
            YF   L++  + ++  +L  A   P   E Y L  I +A+++A   TP + C+      
Sbjct: 147 AYFKKALDLKNQIDLLSILQGADIHPDG-ESYDLVNIRNAIKSAIGYTPWIQCNVDQSGN 206

Query: 229 LRLCFYKDFKPRDCVPTDSQNAIVSSKISCPKYVSLPSYEPGGK 272
            +L     ++   CV         SS I CP +       PGGK
Sbjct: 207 SQL-----YQVYICVDGSG-----SSLIECPIF-------PGGK 220

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BLAST of CmoCh08G002760 vs. Swiss-Prot
Match: RNDI_DICDI (Ribonuclease DdI OS=Dictyostelium discoideum GN=ddiA PE=1 SV=3)

HSP 1 Score: 106.7 bits (265), Expect = 4.3e-22
Identity = 68/226 (30.09%), Postives = 106/226 (46.90%), Query Frame = 1


Query: 12  MAILFIFLLQFSLSVASTSLKEASDAVILQNQGGRKQREFDYFVLALQWPGTICKGTRHC 71
           +A L   LL  S + ++ ++ E+S           K  +FD+++   QW  + C      
Sbjct: 4   IAALLSVLLIASTAQSTVTIYESS-----------KPGDFDFYLFVQQWIYSYC------ 63

Query: 72  CSSNACCNRSGGFAEFTIHGLWPDYNDGTWPSCCTGKEFDEKEIHTLLEPMKKYWSSLSC 131
             S  C       A FTIHGLWP+ +DG++PS C+G  F+   I  L + +   W SL+ 
Sbjct: 64  -DSQTCIQNKEREA-FTIHGLWPENSDGSYPSFCSGPSFNVNAIQDLEDQLNFDWPSLT- 123

Query: 132 SSPKTCHGAKGSFWAHEVTVAKKHGTCS--SPVARDEYGYFLTTLNVYFKYNVTKVLNDA 191
                  G    FW HE +   KHGTCS   P+  D + YF T + +Y ++N+T  L   
Sbjct: 124 -------GPNTDFWTHEFS---KHGTCSITGPIT-DIHDYFATGIKLYTEFNITAALESE 183

Query: 192 GYVPSNTEKYPLGGIISAVENAFHATPLLVCSKGAVEELRLCFYKD 236
              PS++  Y    I +A+   F   P + CS G +  + +C  K+
Sbjct: 184 NIYPSDSNTYKPVDITNAITTHFGGKPGIQCSSGQLSTVAVCIDKN 198

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BLAST of CmoCh08G002760 vs. TrEMBL
Match: A0A0A0K5E4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G374550 PE=3 SV=1)

HSP 1 Score: 452.6 bits (1163), Expect = 3.6e-124
Identity = 204/273 (74.73%), Postives = 230/273 (84.25%), Query Frame = 1


Query: 13  AILFIFLLQFSLSVASTSLKEASDAVILQNQGGRKQREFDYFVLALQWPGTICKGTRHCC 72
           AI  +FLLQF++ ++ST    AS A+I   + G++QREFDYF LALQWPGT+CKGTRHCC
Sbjct: 6   AIPILFLLQFTIFISSTPFNHASGAIIFHTKDGQEQREFDYFKLALQWPGTVCKGTRHCC 65

Query: 73  SSNACCNRSGGFAEFTIHGLWPDYNDGTWPSCCTGKEFDEKEIHTLLEPMKKYWSSLSCS 132
           SSN CCNRSG F +FTIHGLWPDYNDGTWP+CC GK FDEKEI TLL+P+KKYW SLSCS
Sbjct: 66  SSNGCCNRSGAFGDFTIHGLWPDYNDGTWPACCNGKIFDEKEILTLLDPLKKYWPSLSCS 125

Query: 133 SPKTCHGAKGSFWAHEVTVAKKHGTCSSPVARDEYGYFLTTLNVYFKYNVTKVLNDAGYV 192
           SP TCHG+KGSFWAHE    +KHGTCS PVA DEY YFLTTLNVYFKYNVTKVLNDAGY+
Sbjct: 126 SPSTCHGSKGSFWAHE---WEKHGTCSYPVAHDEYNYFLTTLNVYFKYNVTKVLNDAGYL 185

Query: 193 PSNTEKYPLGGIISAVENAFHATPLLVCSKGAVEELRLCFYKDFKPRDCVPTDSQNAIVS 252
           PSNTEKYPLGGIISA++NAFHATP   C KGAVEEL LCFYKDFKPRDC  + SQN I+S
Sbjct: 186 PSNTEKYPLGGIISAIQNAFHATPSFGCKKGAVEELYLCFYKDFKPRDCAESHSQNGIIS 245

Query: 253 SKISCPKYVSLPSYEPGGKIFEFTDSNWQYPNA 286
           S+ SCPKYVSLP+YEP  +IFEF DS+ QY +A
Sbjct: 246 SRSSCPKYVSLPAYEPKARIFEFADSSRQYLSA 275

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BLAST of CmoCh08G002760 vs. TrEMBL
Match: B9IAZ9_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0014s17280g PE=3 SV=1)

HSP 1 Score: 370.2 bits (949), Expect = 2.3e-99
Identity = 170/247 (68.83%), Postives = 193/247 (78.14%), Query Frame = 1


Query: 34  ASDAVILQNQGGRKQREFDYFVLALQWPGTICKGTRHCCSSNACCNRSGGFAEFTIHGLW 93
           AS  +I +      QREFDYF L+LQWPGT C+ TRHCCS NACC  +    EFTIHGLW
Sbjct: 18  ASYCMIEEASAIEGQREFDYFALSLQWPGTYCRHTRHCCSQNACCRGANAPTEFTIHGLW 77

Query: 94  PDYNDGTWPSCCTGKEFDEKEIHTLLEPMKKYWSSLSCSSPKTCHGAKGSFWAHEVTVAK 153
           PDYNDGTWP+CCT  +F+EKEI TL + ++KYW SLSC SP +CHG KGSFWAHE    +
Sbjct: 78  PDYNDGTWPACCTRSDFNEKEISTLHDALEKYWPSLSCGSPSSCHGTKGSFWAHE---WE 137

Query: 154 KHGTCSSPVARDEYGYFLTTLNVYFKYNVTKVLNDAGYVPSNTEKYPLGGIISAVENAFH 213
           KHGTCSSPV  DEY YF TTLNVYFKYNVTKVLN+AGYVPSN+EKYPLGGI+SA+ENAFH
Sbjct: 138 KHGTCSSPVVHDEYSYFSTTLNVYFKYNVTKVLNEAGYVPSNSEKYPLGGIVSAIENAFH 197

Query: 214 ATPLLVCSKGAVEELRLCFYKDFKPRDCVPTDSQNAIVSSKISCPKYVSLPSYEPGGKIF 273
           ATP LVCSKG +EELRLCFYKDFKPRDCV    QN + +SK SCPKYVSLP+Y   G   
Sbjct: 198 ATPQLVCSKGDLEELRLCFYKDFKPRDCV---IQNDMYTSKSSCPKYVSLPAYVSLGLDG 257

Query: 274 EFTDSNW 281
             T+ +W
Sbjct: 258 AGTEVSW 258

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BLAST of CmoCh08G002760 vs. TrEMBL
Match: M5W6T6_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009963mg PE=3 SV=1)

HSP 1 Score: 370.2 bits (949), Expect = 2.3e-99
Identity = 175/260 (67.31%), Postives = 197/260 (75.77%), Query Frame = 1


Query: 17  IFLLQFS-----LSVASTSLKEASDAVILQNQGGRKQREFDYFVLALQWPGTICKGTRHC 76
           IF  QF+     + VAS  L EA+   I    G RKQREFDYF LALQWPGT C+ TRHC
Sbjct: 3   IFSAQFASAVALIVVASLCLIEANQTGIGIEIGSRKQREFDYFNLALQWPGTFCQHTRHC 62

Query: 77  CSSNACCNRSGGFAEFTIHGLWPDYNDGTWPSCCTGKEFDEKEIHTLLEPMKKYWSSLSC 136
           CSSNACC  +     FTIHGLWPDYNDGTWP+CCT K FDEKEI TL + ++KYW SLSC
Sbjct: 63  CSSNACCRGANSPTVFTIHGLWPDYNDGTWPACCTQKSFDEKEISTLHDALEKYWPSLSC 122

Query: 137 SSPKTCHGAKGSFWAHEVTVAKKHGTCSSPVARDEYGYFLTTLNVYFKYNVTKVLNDAGY 196
             P +CHG KGSFW HE    +KHGTCSSPVARDEY YFLTTLNVYFKYNVTKVLN+AGY
Sbjct: 123 GRPSSCHGGKGSFWGHE---WEKHGTCSSPVARDEYSYFLTTLNVYFKYNVTKVLNEAGY 182

Query: 197 VPSNTEKYPLGGIISAVENAFHATPLLVCSKGAVEELRLCFYKDFKPRDC-VPTDSQNAI 256
           VPSNTEKYPLGGI+SA++NAF  TP L+C KGA+EEL LCFYKDFKPRDC + + S N  
Sbjct: 183 VPSNTEKYPLGGIVSAIQNAFRTTPKLLCKKGALEELHLCFYKDFKPRDCAIGSTSPNGR 242

Query: 257 VSSKISCPKYVSLPSYEPGG 271
           + S  SCP YVS+P+Y   G
Sbjct: 243 LYSSSSCPDYVSIPAYASMG 259

[Close]

BLAST of CmoCh08G002760 vs. TrEMBL
Match: A0A141BMV7_9FABA (RNase2 (Fragment) OS=Cytisus striatus PE=2 SV=1)

HSP 1 Score: 368.2 bits (944), Expect = 8.8e-99
Identity = 172/255 (67.45%), Postives = 201/255 (78.82%), Query Frame = 1


Query: 18  FLLQFSLSVASTSLKEASDAVILQNQGGRKQREFDYFVLALQWPGTICKGTRHCCSSNAC 77
           +LL  SL VA  +   + + + L+ +G  KQREFDYF LALQWPGT C+ T+HCCSSNAC
Sbjct: 13  WLLLLSLVVAMAAFVTSMEEMELELEG-HKQREFDYFALALQWPGTYCQRTQHCCSSNAC 72

Query: 78  CNRSGGFAEFTIHGLWPDYNDGTWPSCCTGKEFDEKEIHTLLEPMKKYWSSLSCSSPKTC 137
           C  S     FTIHGLWPDYNDGTWPSCCT   FD KEI TL + +++YW SLSCS P +C
Sbjct: 73  CRGSNAPTTFTIHGLWPDYNDGTWPSCCTKSNFDPKEISTLTDALEQYWPSLSCSKPSSC 132

Query: 138 HGAKGSFWAHEVTVAKKHGTCSSPVARDEYGYFLTTLNVYFKYNVTKVLNDAGYVPSNTE 197
           +G KGSFW HE    +KHGTCSSPV R+EY YFLTTLNVYFKYNVTKVLNDAGYVPSN+E
Sbjct: 133 NGGKGSFWGHE---WEKHGTCSSPVVRNEYDYFLTTLNVYFKYNVTKVLNDAGYVPSNSE 192

Query: 198 KYPLGGIISAVENAFHATPLLVCSKGAVEELRLCFYKDFKPRDC-VPTDSQNAIVSSKIS 257
           KYP+GGIISA+ENAFHA+P +VCSKGAVEELRLCFYKDF+PRDC V +D +  +V+SK S
Sbjct: 193 KYPIGGIISAIENAFHASPQIVCSKGAVEELRLCFYKDFEPRDCAVGSDFKINMVTSKGS 252

Query: 258 CPKYVSLPSYEPGGK 272
           CP+YVSLP     G+
Sbjct: 253 CPQYVSLPELASSGR 263

[Close]

BLAST of CmoCh08G002760 vs. TrEMBL
Match: A9P8H2_POPTR (Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1)

HSP 1 Score: 366.3 bits (939), Expect = 3.4e-98
Identity = 169/247 (68.42%), Postives = 191/247 (77.33%), Query Frame = 1


Query: 34  ASDAVILQNQGGRKQREFDYFVLALQWPGTICKGTRHCCSSNACCNRSGGFAEFTIHGLW 93
           AS  +I +      QREFDYF L+LQWPGT C+ TRHCCS NACC  +    EFTIHGLW
Sbjct: 18  ASYCMIEEASAIEGQREFDYFALSLQWPGTYCRHTRHCCSQNACCRGANAPTEFTIHGLW 77

Query: 94  PDYNDGTWPSCCTGKEFDEKEIHTLLEPMKKYWSSLSCSSPKTCHGAKGSFWAHEVTVAK 153
           PDYNDGTWP+CCT  +F+ KEI TL + ++KYW SLSC SP +CHG KGSFWAHE    +
Sbjct: 78  PDYNDGTWPACCTRSDFNGKEISTLHDALEKYWPSLSCGSPSSCHGTKGSFWAHE---WE 137

Query: 154 KHGTCSSPVARDEYGYFLTTLNVYFKYNVTKVLNDAGYVPSNTEKYPLGGIISAVENAFH 213
           KHGTCSSPV  DEY YF TTLNVYFKYNVTKVLN+AGYVPSN+EKYPLGGI+SA+ENAFH
Sbjct: 138 KHGTCSSPVVHDEYSYFSTTLNVYFKYNVTKVLNEAGYVPSNSEKYPLGGIVSAIENAFH 197

Query: 214 ATPLLVCSKGAVEELRLCFYKDFKPRDCVPTDSQNAIVSSKISCPKYVSLPSYEPGGKIF 273
           ATP LVCSKG +EELRLCFYKDFKPRDCV    QN + +SK SCPKYVSLP+Y   G   
Sbjct: 198 ATPQLVCSKGDLEELRLCFYKDFKPRDCV---IQNDMYTSKSSCPKYVSLPAYVSLGLDG 257

Query: 274 EFTDSNW 281
             T+  W
Sbjct: 258 AGTEVPW 258

[Close]

BLAST of CmoCh08G002760 vs. TAIR10
Match: AT2G39780.1 (AT2G39780.1 ribonuclease 2)

HSP 1 Score: 338.6 bits (867), Expect = 3.8e-93
Identity = 147/223 (65.92%), Postives = 176/223 (78.92%), Query Frame = 1


Query: 46  RKQREFDYFVLALQWPGTICKGTRHCCSSNACCNRSGGFAEFTIHGLWPDYNDGTWPSCC 105
           R QREFDYF L+LQWPGT C+GTRHCCS NACC  S    +FTIHGLWPDYNDG+WPSCC
Sbjct: 27  RSQREFDYFALSLQWPGTYCRGTRHCCSKNACCRGSDAPTQFTIHGLWPDYNDGSWPSCC 86

Query: 106 TGKEFDEKEIHTLLEPMKKYWSSLSCSSPKTCHGAKGSFWAHEVTVAKKHGTCSSPVARD 165
              +F EKEI TL++ ++KYW SLSC SP +C+G KGSFW HE    +KHGTCSSPV  D
Sbjct: 87  YRSDFKEKEISTLMDGLEKYWPSLSCGSPSSCNGGKGSFWGHE---WEKHGTCSSPVFHD 146

Query: 166 EYGYFLTTLNVYFKYNVTKVLNDAGYVPSNTEKYPLGGIISAVENAFHATPLLVCSKGAV 225
           EY YFLTTLN+Y K+NVT VL  AGYV SN+EKYPLGGI++A++NAFH TP +VC + A+
Sbjct: 147 EYNYFLTTLNLYLKHNVTDVLYQAGYVASNSEKYPLGGIVTAIQNAFHITPEVVCKRDAI 206

Query: 226 EELRLCFYKDFKPRDCVPTDSQNAIVSSKISCPKYVSLPSYEP 269
           +E+R+CFYKDFKPRDCV +      ++S+ SCPKYVSLP Y P
Sbjct: 207 DEIRICFYKDFKPRDCVGSQD----LTSRKSCPKYVSLPEYTP 242

[Close]

BLAST of CmoCh08G002760 vs. TAIR10
Match: AT1G14220.1 (AT1G14220.1 Ribonuclease T2 family protein)

HSP 1 Score: 128.6 bits (322), Expect = 6.0e-30
Identity = 77/224 (34.38%), Postives = 116/224 (51.79%), Query Frame = 1


Query: 46  RKQREFDYFVLALQWPGTICKGTRHCCSSNACCNRSGG--FAEFTIHGLWPDYNDGTWPS 105
           R Q +FD+F   LQWPG       +C +S ACC  + G   A+F IHGLWP+YN G+WPS
Sbjct: 23  RPQEDFDFFYFVLQWPGA------YCDTSRACCYPTSGKPAADFGIHGLWPNYNGGSWPS 82

Query: 106 -CCTGKEFDEKEIHTLLEPMKKYWSSLSCSSPKTCHGAKGSFWAHEVTVAKKHGTCSSPV 165
            C    +FD  +I  L+  +KK W +LSC S +       +FW HE    +KHGTCS  V
Sbjct: 83  NCDPDSQFDRSQISDLVSSLKKNWPTLSCPSNEGF-----NFWEHE---WEKHGTCSESV 142

Query: 166 ARDEYGYFLTTLNVYFKYNVTKVLNDAGYVPSNTEKYPLGGIISAVENAFHATPLLVCSK 225
             D++ YF   L +  K N+ ++L ++G  P +   Y L  I +A+++    TP + C+K
Sbjct: 143 -MDQHEYFENALKLKQKANLLQILKNSGINPDD-GFYNLDKITNAIKDGIGFTPGIECNK 202

Query: 226 GAVEELRLCFYKDFKPRDCVPTDSQNAIVSSKISCPKYVSLPSY 267
                 +L  ++ +   D   T+     V  + SCP  +    +
Sbjct: 203 DPERNAQL--HQIYICVDTSGTEFIECPVLPRGSCPSQIQFSKF 228

[Close]

BLAST of CmoCh08G002760 vs. TAIR10
Match: AT2G02990.1 (AT2G02990.1 ribonuclease 1)

HSP 1 Score: 126.3 bits (316), Expect = 3.0e-29
Identity = 79/212 (37.26%), Postives = 106/212 (50.00%), Query Frame = 1


Query: 12  MAILFIFLLQFSLSVASTSLKEASDAVILQNQGGRKQREFDYFVLALQWPGTICKGTRHC 71
           M IL   L   SL V   S+  AS +            +FD+F    QWPG+ C   + C
Sbjct: 1   MKILLASLCLISLLVILPSVFSASSS----------SEDFDFFYFVQQWPGSYCDTQKKC 60

Query: 72  CSSNACCNRSGGFAEFTIHGLWPDYNDGTWPS-CCTGKEFDEKEIHTLLEPMKKYWSSLS 131
           C  N+        A+F IHGLWP+Y DGT+PS C   K FD   I  LL  MKK W +L+
Sbjct: 61  CYPNS----GKPAADFGIHGLWPNYKDGTYPSNCDASKPFDSSTISDLLTSMKKSWPTLA 120

Query: 132 CSSPKTCHGAKGSFWAHEVTVAKKHGTCSSPVARDEYGYFLTTLNVYFKYNVTKVLNDAG 191
           C S     G+  +FW HE    +KHGTCS  V  D++ YF T LN+  K N+   L  AG
Sbjct: 121 CPS-----GSGEAFWEHE---WEKHGTCSESVI-DQHEYFQTALNLKQKTNLLGALTKAG 180

Query: 192 YVPSNTEKYPLGGIISAVENAFHATPLLVCSK 223
             P   + Y L  I  +++ +   TP + C++
Sbjct: 181 INPDG-KSYSLESIRDSIKESIGFTPWVECNR 188

[Close]

BLAST of CmoCh08G002760 vs. TAIR10
Match: AT1G26820.1 (AT1G26820.1 ribonuclease 3)

HSP 1 Score: 105.9 bits (263), Expect = 4.1e-23
Identity = 66/211 (31.28%), Postives = 100/211 (47.39%), Query Frame = 1


Query: 49  REFDYFVLALQWPGTICKGTRHCCSSNACCNRSGGFAEFTIHGLWPDYNDGTWP-SCCTG 108
           ++FD+F   LQWPG  C     CC            A+F IHGLWP+Y  G WP +C   
Sbjct: 20  QDFDFFYFVLQWPGAYCDSRHSCCYPQT----GKPAADFGIHGLWPNYKTGGWPQNCNPD 79

Query: 109 KEFDEKEIHTLLEPMKKYWSSLSCSSPKTCHGAKGSFWAHEVTVAKKHGTCSSPVARDEY 168
             FD+  +  L+  +++ W +LSC S     G K  FW HE    +KHGTC+     D++
Sbjct: 80  SRFDDLRVSDLMSDLQREWPTLSCPSN---DGMK--FWTHE---WEKHGTCAES-ELDQH 139

Query: 169 GYFLTTLNVYFKYNVTKVLNDAGYVPSNTEKYPLGGIISAVENAFHATPLLVCSKGAVEE 228
            YF   L +  K N+   L +AG  P + + Y +  I + ++      P + C+K +   
Sbjct: 140 DYFEAGLKLKQKANLLHALTNAGIKPDD-KFYEMKDIENTIKQVVGFAPGIECNKDSSHN 199

Query: 229 LRLCFYKDFKPRDCVPTDSQNAIVSSKISCP 259
            +L     ++   CV T +     S  I+CP
Sbjct: 200 SQL-----YQIYLCVDTSA-----SKFINCP 206

[Close]

BLAST of CmoCh08G002760 vs. TAIR10
Match: AT1G14210.1 (AT1G14210.1 Ribonuclease T2 family protein)

HSP 1 Score: 99.0 bits (245), Expect = 5.1e-21
Identity = 71/239 (29.71%), Postives = 112/239 (46.86%), Query Frame = 1


Query: 38  VILQN---QGGRKQREFDYFVLALQWPGTICKGTRHCCSSNACCNRSGGFAEFTIHGLWP 97
           +ILQ+      + + +F++F     WPG IC   + CC       +    ++F IHGLWP
Sbjct: 10  LILQSLVVSSSQTEPDFNFFYWVNYWPGAICDSQKGCCPPT----KGNTASDFIIHGLWP 69

Query: 98  DYNDGTWPSCCTGKE-FDEKEIHTLLEPMKKYWSSLSCSSPKTCHGAKGSFWAHEVTVAK 157
            +N+GTWP+ C     FD  +I  L+  M+K W+     +   C   + + W HE     
Sbjct: 70  QFNNGTWPAFCDQTNLFDISKISDLVCQMEKKWTEWGVWA---CPSNETNLWEHE---WN 129

Query: 158 KHGTCSSPVARDEYGYFLTTLNVYFKYNVTKVLNDAGYVPSNTEKYPLGGIISAVENAFH 217
           KHGTC   +  D++ YF T L    K ++  +L   G  P N   Y L  I +A++ A  
Sbjct: 130 KHGTCVQSIF-DQHSYFRTNLKFKHKVHLLNILIQKGIKP-NDGFYSLDEIKNAIKCAIG 189

Query: 218 ATPLLVCSKGA-----VEELRLC---FYKDFKPRDCVPTDSQNAIVSSKISCPKYVSLP 265
             P + C++       + ++ +C   + K+F     VP  S     +SKI   K+ SLP
Sbjct: 190 FAPGIECNEDVKGNKQLFQIYICLDNYAKEFVECPYVPDKS----CASKI---KFPSLP 229

[Close]

BLAST of CmoCh08G002760 vs. NCBI nr
Match: gi|659092767|ref|XP_008447208.1| (PREDICTED: ribonuclease 2-like [Cucumis melo])

HSP 1 Score: 462.2 bits (1188), Expect = 6.4e-127
Identity = 213/273 (78.02%), Postives = 234/273 (85.71%), Query Frame = 1


Query: 13  AILFIFLLQFSLSVASTSLKEASDAVILQNQGGRKQREFDYFVLALQWPGTICKGTRHCC 72
           AI  IFLLQF++ +AS +L  AS AVI Q + GR+QREFDYF LALQWPGTICK TRHCC
Sbjct: 6   AIPIIFLLQFTIFLASNTLNHASGAVIFQTKDGREQREFDYFKLALQWPGTICKSTRHCC 65

Query: 73  SSNACCNRSGGFAEFTIHGLWPDYNDGTWPSCCTGKEFDEKEIHTLLEPMKKYWSSLSCS 132
           SSNACCNRSG FA+FTIHGLWPDYNDGTWP+CC GK FDEKEI TLL+P+KKYW SLSCS
Sbjct: 66  SSNACCNRSGAFADFTIHGLWPDYNDGTWPACCNGKIFDEKEIRTLLDPLKKYWPSLSCS 125

Query: 133 SPKTCHGAKGSFWAHEVTVAKKHGTCSSPVARDEYGYFLTTLNVYFKYNVTKVLNDAGYV 192
           SP TCHG+KGSFWAHE    +KHGTCS PVARDEY YFLTTLNVYFKYNVTKVLNDAGYV
Sbjct: 126 SPSTCHGSKGSFWAHE---WEKHGTCSYPVARDEYNYFLTTLNVYFKYNVTKVLNDAGYV 185

Query: 193 PSNTEKYPLGGIISAVENAFHATPLLVCSKGAVEELRLCFYKDFKPRDCVPTDSQNAIVS 252
           PSNTEKYPLGGIISA++NAF ATP L C KGAV+EL LCFYKDFKPRDC  T SQN IVS
Sbjct: 186 PSNTEKYPLGGIISAIQNAFRATPSLECRKGAVKELHLCFYKDFKPRDCAETHSQNVIVS 245

Query: 253 SKISCPKYVSLPSYEPGGKIFEFTDSNWQYPNA 286
           S+ SCPKYVSLP+YEP  +IF+F DS+ QY +A
Sbjct: 246 SRSSCPKYVSLPAYEPEARIFDFADSSGQYLSA 275

[Close]

BLAST of CmoCh08G002760 vs. NCBI nr
Match: gi|449462427|ref|XP_004148942.1| (PREDICTED: ribonuclease 2 [Cucumis sativus])

HSP 1 Score: 452.6 bits (1163), Expect = 5.1e-124
Identity = 204/273 (74.73%), Postives = 230/273 (84.25%), Query Frame = 1


Query: 13  AILFIFLLQFSLSVASTSLKEASDAVILQNQGGRKQREFDYFVLALQWPGTICKGTRHCC 72
           AI  +FLLQF++ ++ST    AS A+I   + G++QREFDYF LALQWPGT+CKGTRHCC
Sbjct: 6   AIPILFLLQFTIFISSTPFNHASGAIIFHTKDGQEQREFDYFKLALQWPGTVCKGTRHCC 65

Query: 73  SSNACCNRSGGFAEFTIHGLWPDYNDGTWPSCCTGKEFDEKEIHTLLEPMKKYWSSLSCS 132
           SSN CCNRSG F +FTIHGLWPDYNDGTWP+CC GK FDEKEI TLL+P+KKYW SLSCS
Sbjct: 66  SSNGCCNRSGAFGDFTIHGLWPDYNDGTWPACCNGKIFDEKEILTLLDPLKKYWPSLSCS 125

Query: 133 SPKTCHGAKGSFWAHEVTVAKKHGTCSSPVARDEYGYFLTTLNVYFKYNVTKVLNDAGYV 192
           SP TCHG+KGSFWAHE    +KHGTCS PVA DEY YFLTTLNVYFKYNVTKVLNDAGY+
Sbjct: 126 SPSTCHGSKGSFWAHE---WEKHGTCSYPVAHDEYNYFLTTLNVYFKYNVTKVLNDAGYL 185

Query: 193 PSNTEKYPLGGIISAVENAFHATPLLVCSKGAVEELRLCFYKDFKPRDCVPTDSQNAIVS 252
           PSNTEKYPLGGIISA++NAFHATP   C KGAVEEL LCFYKDFKPRDC  + SQN I+S
Sbjct: 186 PSNTEKYPLGGIISAIQNAFHATPSFGCKKGAVEELYLCFYKDFKPRDCAESHSQNGIIS 245

Query: 253 SKISCPKYVSLPSYEPGGKIFEFTDSNWQYPNA 286
           S+ SCPKYVSLP+YEP  +IFEF DS+ QY +A
Sbjct: 246 SRSSCPKYVSLPAYEPKARIFEFADSSRQYLSA 275

[Close]

BLAST of CmoCh08G002760 vs. NCBI nr
Match: gi|802546305|ref|XP_012084328.1| (PREDICTED: ribonuclease 2 [Jatropha curcas])

HSP 1 Score: 372.5 bits (955), Expect = 6.7e-100
Identity = 171/250 (68.40%), Postives = 191/250 (76.40%), Query Frame = 1


Query: 20  LQFSLSVASTSLKEASDAVILQNQGGRKQREFDYFVLALQWPGTICKGTRHCCSSNACCN 79
           L   L +A   L  AS  +I + +G   QREFDYF L+LQWPGT C  TRHCCS NACC 
Sbjct: 4   LSVHLRLALVLLAIASFCLIDEVRGRPAQREFDYFKLSLQWPGTFCHRTRHCCSKNACCR 63

Query: 80  RSGGFAEFTIHGLWPDYNDGTWPSCCTGKEFDEKEIHTLLEPMKKYWSSLSCSSPKTCHG 139
            S    EFTIHGLWPDYNDGTWP+CCT   FDEKEI +L + ++KYW SLSC SP TCHG
Sbjct: 64  GSNAPTEFTIHGLWPDYNDGTWPACCTRSNFDEKEISSLTDALEKYWPSLSCDSPSTCHG 123

Query: 140 AKGSFWAHEVTVAKKHGTCSSPVARDEYGYFLTTLNVYFKYNVTKVLNDAGYVPSNTEKY 199
            +GSFWAHE    +KHGTCS+PV RDEY YFLTTLN+YFKYNVTKVLN+ GYVPSNTEKY
Sbjct: 124 TRGSFWAHEW---EKHGTCSAPVVRDEYSYFLTTLNIYFKYNVTKVLNEVGYVPSNTEKY 183

Query: 200 PLGGIISAVENAFHATPLLVCSKGAVEELRLCFYKDFKPRDCVPTDSQNAIVSSKISCPK 259
           PLGGI+SA+ENAFHATP +VCS+G VEEL LCFYKDFKPRDCV       I SS+ SCPK
Sbjct: 184 PLGGIVSAIENAFHATPFIVCSRGEVEELHLCFYKDFKPRDCVIGSIIQNIYSSRSSCPK 243

Query: 260 YVSLPSYEPG 270
           YVSLP Y  G
Sbjct: 244 YVSLPLYSFG 250

[Close]

BLAST of CmoCh08G002760 vs. NCBI nr
Match: gi|224131990|ref|XP_002321228.1| (hypothetical protein POPTR_0014s17280g [Populus trichocarpa])

HSP 1 Score: 370.2 bits (949), Expect = 3.3e-99
Identity = 170/247 (68.83%), Postives = 193/247 (78.14%), Query Frame = 1


Query: 34  ASDAVILQNQGGRKQREFDYFVLALQWPGTICKGTRHCCSSNACCNRSGGFAEFTIHGLW 93
           AS  +I +      QREFDYF L+LQWPGT C+ TRHCCS NACC  +    EFTIHGLW
Sbjct: 18  ASYCMIEEASAIEGQREFDYFALSLQWPGTYCRHTRHCCSQNACCRGANAPTEFTIHGLW 77

Query: 94  PDYNDGTWPSCCTGKEFDEKEIHTLLEPMKKYWSSLSCSSPKTCHGAKGSFWAHEVTVAK 153
           PDYNDGTWP+CCT  +F+EKEI TL + ++KYW SLSC SP +CHG KGSFWAHE    +
Sbjct: 78  PDYNDGTWPACCTRSDFNEKEISTLHDALEKYWPSLSCGSPSSCHGTKGSFWAHE---WE 137

Query: 154 KHGTCSSPVARDEYGYFLTTLNVYFKYNVTKVLNDAGYVPSNTEKYPLGGIISAVENAFH 213
           KHGTCSSPV  DEY YF TTLNVYFKYNVTKVLN+AGYVPSN+EKYPLGGI+SA+ENAFH
Sbjct: 138 KHGTCSSPVVHDEYSYFSTTLNVYFKYNVTKVLNEAGYVPSNSEKYPLGGIVSAIENAFH 197

Query: 214 ATPLLVCSKGAVEELRLCFYKDFKPRDCVPTDSQNAIVSSKISCPKYVSLPSYEPGGKIF 273
           ATP LVCSKG +EELRLCFYKDFKPRDCV    QN + +SK SCPKYVSLP+Y   G   
Sbjct: 198 ATPQLVCSKGDLEELRLCFYKDFKPRDCV---IQNDMYTSKSSCPKYVSLPAYVSLGLDG 257

Query: 274 EFTDSNW 281
             T+ +W
Sbjct: 258 AGTEVSW 258

[Close]

BLAST of CmoCh08G002760 vs. NCBI nr
Match: gi|595797777|ref|XP_007201311.1| (hypothetical protein PRUPE_ppa009963mg [Prunus persica])

HSP 1 Score: 370.2 bits (949), Expect = 3.3e-99
Identity = 175/260 (67.31%), Postives = 197/260 (75.77%), Query Frame = 1


Query: 17  IFLLQFS-----LSVASTSLKEASDAVILQNQGGRKQREFDYFVLALQWPGTICKGTRHC 76
           IF  QF+     + VAS  L EA+   I    G RKQREFDYF LALQWPGT C+ TRHC
Sbjct: 3   IFSAQFASAVALIVVASLCLIEANQTGIGIEIGSRKQREFDYFNLALQWPGTFCQHTRHC 62

Query: 77  CSSNACCNRSGGFAEFTIHGLWPDYNDGTWPSCCTGKEFDEKEIHTLLEPMKKYWSSLSC 136
           CSSNACC  +     FTIHGLWPDYNDGTWP+CCT K FDEKEI TL + ++KYW SLSC
Sbjct: 63  CSSNACCRGANSPTVFTIHGLWPDYNDGTWPACCTQKSFDEKEISTLHDALEKYWPSLSC 122

Query: 137 SSPKTCHGAKGSFWAHEVTVAKKHGTCSSPVARDEYGYFLTTLNVYFKYNVTKVLNDAGY 196
             P +CHG KGSFW HE    +KHGTCSSPVARDEY YFLTTLNVYFKYNVTKVLN+AGY
Sbjct: 123 GRPSSCHGGKGSFWGHE---WEKHGTCSSPVARDEYSYFLTTLNVYFKYNVTKVLNEAGY 182

Query: 197 VPSNTEKYPLGGIISAVENAFHATPLLVCSKGAVEELRLCFYKDFKPRDC-VPTDSQNAI 256
           VPSNTEKYPLGGI+SA++NAF  TP L+C KGA+EEL LCFYKDFKPRDC + + S N  
Sbjct: 183 VPSNTEKYPLGGIVSAIQNAFRTTPKLLCKKGALEELHLCFYKDFKPRDCAIGSTSPNGR 242

Query: 257 VSSKISCPKYVSLPSYEPGG 271
           + S  SCP YVS+P+Y   G
Sbjct: 243 LYSSSSCPDYVSIPAYASMG 259

The following BLAST results are available for this feature:

BLAST of CmoCh08G002760 vs. Swiss-Prot


Match Name	E-value	Identity	Description
RNS2_ARATH	6.7e-92	65.92	Ribonuclease 2 OS=Arabidopsis thaliana GN=RNS2 PE=2 SV=1	[more]
RNS1_ARATH	5.2e-28	37.26	Ribonuclease 1 OS=Arabidopsis thaliana GN=RNS1 PE=1 SV=1	[more]
RNLX_SOLLC	7.6e-27	33.48	Intracellular ribonuclease LX OS=Solanum lycopersicum GN=RNALX PE=1 SV=2	[more]
RNLE_SOLLC	1.4e-25	31.70	Extracellular ribonuclease LE OS=Solanum lycopersicum PE=1 SV=2	[more]
RNDI_DICDI	4.3e-22	30.09	Ribonuclease DdI OS=Dictyostelium discoideum GN=ddiA PE=1 SV=3	[more]

BLAST of CmoCh08G002760 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K5E4_CUCSA	3.6e-124	74.73	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G374550 PE=3 SV=1	[more]
B9IAZ9_POPTR	2.3e-99	68.83	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0014s17280g PE=3 SV=1	[more]
M5W6T6_PRUPE	2.3e-99	67.31	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009963mg PE=3 SV=1	[more]
A0A141BMV7_9FABA	8.8e-99	67.45	RNase2 (Fragment) OS=Cytisus striatus PE=2 SV=1	[more]
A9P8H2_POPTR	3.4e-98	68.42	Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1	[more]

BLAST of CmoCh08G002760 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G39780.1	3.8e-93	65.92	ribonuclease 2	[more]
AT1G14220.1	6.0e-30	34.38	Ribonuclease T2 family protein	[more]
AT2G02990.1	3.0e-29	37.26	ribonuclease 1	[more]
AT1G26820.1	4.1e-23	31.28	ribonuclease 3	[more]
AT1G14210.1	5.1e-21	29.71	Ribonuclease T2 family protein	[more]

BLAST of CmoCh08G002760 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659092767\|ref\|XP_008447208.1\|	6.4e-127	78.02	PREDICTED: ribonuclease 2-like [Cucumis melo]	[more]
gi\|449462427\|ref\|XP_004148942.1\|	5.1e-124	74.73	PREDICTED: ribonuclease 2 [Cucumis sativus]	[more]
gi\|802546305\|ref\|XP_012084328.1\|	6.7e-100	68.40	PREDICTED: ribonuclease 2 [Jatropha curcas]	[more]
gi\|224131990\|ref\|XP_002321228.1\|	3.3e-99	68.83	hypothetical protein POPTR_0014s17280g [Populus trichocarpa]	[more]
gi\|595797777\|ref\|XP_007201311.1\|	3.3e-99	67.31	hypothetical protein PRUPE_ppa009963mg [Prunus persica]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001568	RNase_T2-like
IPR018188	RNase_T2_His_AS_1

Vocabulary: **Molecular Function**
Term	Definition
GO:0003723	RNA binding
GO:0033897	ribonuclease T2 activity

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0044248	cellular catabolic process
biological_process	GO:0090502	RNA phosphodiester bond hydrolysis, endonucleolytic
biological_process	GO:0010507	negative regulation of autophagy
biological_process	GO:0016075	rRNA catabolic process
biological_process	GO:0008150	biological_process
cellular_component	GO:0044444	cytoplasmic part
cellular_component	GO:0043231	intracellular membrane-bounded organelle
cellular_component	GO:0005783	endoplasmic reticulum
cellular_component	GO:0010168	ER body
cellular_component	GO:0005773	vacuole
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0033897	ribonuclease T2 activity
molecular_function	GO:0003723	RNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh08G002760.1	CmoCh08G002760.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001568	Ribonuclease T2-like	GENE3D	G3DSA:3.90.730.10		coord: 48..264 score: 2.1
IPR001568	Ribonuclease T2-like	PANTHER	PTHR11240	RIBONUCLEASE T2	coord: 8..280 score: 3.8E
IPR001568	Ribonuclease T2-like	PFAM	PF00445	Ribonuclease_T2	coord: 53..241 score: 2.0
IPR001568	Ribonuclease T2-like	unknown	SSF55895	Ribonuclease Rh-like	coord: 50..263 score: 2.36
IPR018188	Ribonuclease T2, His active site 1	PROSITE	PS00530	RNASE_T2_1	coord: 87..94 scor
None	No IPR available	PANTHER	PTHR11240:SF16	RIBONUCLEASE 2	coord: 8..280 score: 3.8E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh08G002760	Cucsa.388260	Cucumber (Gy14) v1	cgycmoB1078
CmoCh08G002760	CmaCh17G013260	Cucurbita maxima (Rimu)	cmacmoB366
CmoCh08G002760	CmaCh08G002770	Cucurbita maxima (Rimu)	cmacmoB913
CmoCh08G002760	Cla014851	Watermelon (97103) v1	cmowmB843
CmoCh08G002760	Csa7G374550	Cucumber (Chinese Long) v2	cmocuB900
CmoCh08G002760	MELO3C012716	Melon (DHL92) v3.5.1	cmomeB817
CmoCh08G002760	ClCG09G007980	Watermelon (Charleston Gray)	cmowcgB785
CmoCh08G002760	CSPI07G15340	Wild cucumber (PI 183967)	cmocpiB913
CmoCh08G002760	Lsi02G021860	Bottle gourd (USVL1VR-Ls)	cmolsiB809
CmoCh08G002760	Cp4.1LG12g10460	Cucurbita pepo (Zucchini)	cmocpeB834
CmoCh08G002760	Cp4.1LG17g06000	Cucurbita pepo (Zucchini)	cmocpeB853
CmoCh08G002760	MELO3C012716.2	Melon (DHL92) v3.6.1	cmomedB922
CmoCh08G002760	CsaV3_7G027100	Cucumber (Chinese Long) v3	cmocucB1066
CmoCh08G002760	Cla97C09G170600	Watermelon (97103) v2	cmowmbB916
CmoCh08G002760	Bhi09G000996	Wax gourd	cmowgoB1128
CmoCh08G002760	CsGy7G013810	Cucumber (Gy14) v2	cgybcmoB955
CmoCh08G002760	Carg05103	Silver-seed gourd	carcmoB0119
CmoCh08G002760	Carg11505	Silver-seed gourd	carcmoB0022

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmoCh08G002760	CmoCh17G012920	Cucurbita moschata (Rifu)	cmocmoB311

The following block(s) are covering this gene:

None