CmoCh08G001270 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh08G001270
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Ubiquitin carboxyl-terminal hydrolase family protein
Location	Cmo_Chr08 : 663857 .. 665398 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATTCCATGGTACTTTTTTATTCGCCCAAAGCTTCGTTATCCATGTCCATACCTTTCGTTCTTCCGCATAGAGGTTATTTCTTTGAGAATCCTTCTTTGTCTGTTAAATCGGAATTTTGGGGGAAGAACTTGGATTTGCGGCACAGAAATGATGGTTTTTCCGGTAGTGATTTAAGAAAATCTCGTGTTCCTTTTCAACCGATTAGAGCTATTGTGAAACGGAGGAAAGAGCTTCCGTTCGATAATGTTATACAGAGGGATAAGAAGCTGAAGTTAGTTATGAGGATTAGGAAGATTCTAGTTCAACATCCTGATAGAGTTATGTCGCTTAAGGAACTAGGTAAATTCAGGAGAGATTTGGGTCTGGAGAAAAAGAGGAGGCTAATTGCTTTGTTGAAGAAGTTCCCTGCAGTGTTTGAGGTTGTGGAAGAAGGGGCATTTTCGTTGAAAGTCAAGTTAACGGCGGAGGCCGAAAGGTTATATTTGGAGGAGTTGAAGATCAGGAATGAGATGGAAGGCTTGTTGGTTATGAAGCTGAGGAAGCTACTGATGATGTCGGTTGATAAACGAATATTGTTGGAGAAGATTGCTCATTTGAGGACTGATTTCGGTCTTCCTTTAGAGTTTCGTGAAACGATTTGTCACGGTTATCCTCAGTACTTTAGAGTTGTAGCAACGGGGCGTGGTCCAGCCCTCGAATTGACTCACTGGGATCCTGAACTTGCAGTTTCTGCATCAGAGTTGGCAGAAGAGGAAAACCGAGCTATAGAGTTGGAAGAGAAGAATTTGATTATTGACCGACCGCTGAAGTTTAATCGTGTGAGGCTACCCAAGGGGCTTAACGTCTCAAAGAGTGAAATGAGGAGAATTTGTCAGTTTAGGGACATTCCTTACATCTCTCCCTATTCTGATTTCTCGGGGCTTAAGGCAGGTACGCCCGAGAAAGAGAAACACGCTTGCGGGGTTGTTCATGAGATTTTAAGCCTCACACTTGAGAAGAGAACTCTAGTGGATCATCTCACTCATTTTCGAGAAGAGTTTAGATTCTCGCAGCAGTTGAGGGGGATGTTAATAAGGCATCCCGATATGTTTTACGTCTCACTGAAGGGGGATAGAGATTCGGTCTTCCTCAGAGAAGCATATCGTAATTCTCAGTTGATCGACAAAGATCGGTTACTAATCATAAAGGAGAAACTCCGAGCTCTTGTTGCTGTTCCTCGAATCCGAGGCAGAGGAGCACTCAAAAACGACACAGATGGGGGAGACGATCAGCCAGATTATATGAGTGGTGATGAGTCATCTGATATCGATAACCTTTTGGACGATGATGATGAATTTGACGACAATGAGGATGGAGCTTTTGAGGATAATTGGAGTGATGAAGAAGATGATACCCCACCGAGTTTCAATGGAGATCGAGATGGCGAATCCATAAATATTGAAGCAAGGAAGCAAAGGCAGGTCGATAACTCGCAAAAGCTCGATCAGAGTCTTCTTTCTCCCGTATTACCCGATGGACGGCCCCGAGAAAGATGGTGA

mRNA sequence

ATGGATTCCATGGTACTTTTTTATTCGCCCAAAGCTTCGTTATCCATGTCCATACCTTTCGTTCTTCCGCATAGAGGTTATTTCTTTGAGAATCCTTCTTTGTCTGTTAAATCGGAATTTTGGGGGAAGAACTTGGATTTGCGGCACAGAAATGATGGTTTTTCCGGTAGTGATTTAAGAAAATCTCGTGTTCCTTTTCAACCGATTAGAGCTATTGTGAAACGGAGGAAAGAGCTTCCGTTCGATAATGTTATACAGAGGGATAAGAAGCTGAAGTTAGTTATGAGGATTAGGAAGATTCTAGTTCAACATCCTGATAGAGTTATGTCGCTTAAGGAACTAGGTAAATTCAGGAGAGATTTGGGTCTGGAGAAAAAGAGGAGGCTAATTGCTTTGTTGAAGAAGTTCCCTGCAGTGTTTGAGGTTGTGGAAGAAGGGGCATTTTCGTTGAAAGTCAAGTTAACGGCGGAGGCCGAAAGGTTATATTTGGAGGAGTTGAAGATCAGGAATGAGATGGAAGGCTTGTTGGTTATGAAGCTGAGGAAGCTACTGATGATGTCGGTTGATAAACGAATATTGTTGGAGAAGATTGCTCATTTGAGGACTGATTTCGGTCTTCCTTTAGAGTTTCGTGAAACGATTTGTCACGGTTATCCTCAGTACTTTAGAGTTGTAGCAACGGGGCGTGGTCCAGCCCTCGAATTGACTCACTGGGATCCTGAACTTGCAGTTTCTGCATCAGAGTTGGCAGAAGAGGAAAACCGAGCTATAGAGTTGGAAGAGAAGAATTTGATTATTGACCGACCGCTGAAGTTTAATCGTGTGAGGCTACCCAAGGGGCTTAACGTCTCAAAGAGTGAAATGAGGAGAATTTGTCAGTTTAGGGACATTCCTTACATCTCTCCCTATTCTGATTTCTCGGGGCTTAAGGCAGGTACGCCCGAGAAAGAGAAACACGCTTGCGGGGTTGTTCATGAGATTTTAAGCCTCACACTTGAGAAGAGAACTCTAGTGGATCATCTCACTCATTTTCGAGAAGAGTTTAGATTCTCGCAGCAGTTGAGGGGGATGTTAATAAGGCATCCCGATATGTTTTACGTCTCACTGAAGGGGGATAGAGATTCGGTCTTCCTCAGAGAAGCATATCGTAATTCTCAGTTGATCGACAAAGATCGGTTACTAATCATAAAGGAGAAACTCCGAGCTCTTGTTGCTGTTCCTCGAATCCGAGGCAGAGGAGCACTCAAAAACGACACAGATGGGGGAGACGATCAGCCAGATTATATGAGTGGTGATGAGTCATCTGATATCGATAACCTTTTGGACGATGATGATGAATTTGACGACAATGAGGATGGAGCTTTTGAGGATAATTGGAGTGATGAAGAAGATGATACCCCACCGAGTTTCAATGGAGATCGAGATGGCGAATCCATAAATATTGAAGCAAGGAAGCAAAGGCAGGTCGATAACTCGCAAAAGCTCGATCAGAGTCTTCTTTCTCCCGTATTACCCGATGGACGGCCCCGAGAAAGATGGTGA

Coding sequence (CDS)

ATGGATTCCATGGTACTTTTTTATTCGCCCAAAGCTTCGTTATCCATGTCCATACCTTTCGTTCTTCCGCATAGAGGTTATTTCTTTGAGAATCCTTCTTTGTCTGTTAAATCGGAATTTTGGGGGAAGAACTTGGATTTGCGGCACAGAAATGATGGTTTTTCCGGTAGTGATTTAAGAAAATCTCGTGTTCCTTTTCAACCGATTAGAGCTATTGTGAAACGGAGGAAAGAGCTTCCGTTCGATAATGTTATACAGAGGGATAAGAAGCTGAAGTTAGTTATGAGGATTAGGAAGATTCTAGTTCAACATCCTGATAGAGTTATGTCGCTTAAGGAACTAGGTAAATTCAGGAGAGATTTGGGTCTGGAGAAAAAGAGGAGGCTAATTGCTTTGTTGAAGAAGTTCCCTGCAGTGTTTGAGGTTGTGGAAGAAGGGGCATTTTCGTTGAAAGTCAAGTTAACGGCGGAGGCCGAAAGGTTATATTTGGAGGAGTTGAAGATCAGGAATGAGATGGAAGGCTTGTTGGTTATGAAGCTGAGGAAGCTACTGATGATGTCGGTTGATAAACGAATATTGTTGGAGAAGATTGCTCATTTGAGGACTGATTTCGGTCTTCCTTTAGAGTTTCGTGAAACGATTTGTCACGGTTATCCTCAGTACTTTAGAGTTGTAGCAACGGGGCGTGGTCCAGCCCTCGAATTGACTCACTGGGATCCTGAACTTGCAGTTTCTGCATCAGAGTTGGCAGAAGAGGAAAACCGAGCTATAGAGTTGGAAGAGAAGAATTTGATTATTGACCGACCGCTGAAGTTTAATCGTGTGAGGCTACCCAAGGGGCTTAACGTCTCAAAGAGTGAAATGAGGAGAATTTGTCAGTTTAGGGACATTCCTTACATCTCTCCCTATTCTGATTTCTCGGGGCTTAAGGCAGGTACGCCCGAGAAAGAGAAACACGCTTGCGGGGTTGTTCATGAGATTTTAAGCCTCACACTTGAGAAGAGAACTCTAGTGGATCATCTCACTCATTTTCGAGAAGAGTTTAGATTCTCGCAGCAGTTGAGGGGGATGTTAATAAGGCATCCCGATATGTTTTACGTCTCACTGAAGGGGGATAGAGATTCGGTCTTCCTCAGAGAAGCATATCGTAATTCTCAGTTGATCGACAAAGATCGGTTACTAATCATAAAGGAGAAACTCCGAGCTCTTGTTGCTGTTCCTCGAATCCGAGGCAGAGGAGCACTCAAAAACGACACAGATGGGGGAGACGATCAGCCAGATTATATGAGTGGTGATGAGTCATCTGATATCGATAACCTTTTGGACGATGATGATGAATTTGACGACAATGAGGATGGAGCTTTTGAGGATAATTGGAGTGATGAAGAAGATGATACCCCACCGAGTTTCAATGGAGATCGAGATGGCGAATCCATAAATATTGAAGCAAGGAAGCAAAGGCAGGTCGATAACTCGCAAAAGCTCGATCAGAGTCTTCTTTCTCCCGTATTACCCGATGGACGGCCCCGAGAAAGATGGTGA

Homology

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BLAST of CmoCh08G001270 vs. Swiss-Prot
Match: RPD1_ARATH (Protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Arabidopsis thaliana GN=RPD1 PE=1 SV=1)

HSP 1 Score: 156.0 bits (393), Expect = 1.1e-36
Identity = 116/384 (30.21%), Postives = 197/384 (51.30%), Query Frame = 1


Query: 65  PFQPIRAIVKRR---KELPFDNVIQRDKKLKLVMRIRKILVQHPDRVMSLKELGKFRRDL 124
           PF     I K++   ++  +DN ++ +KK++ V++   +++  P+  +++  L    R L
Sbjct: 33  PFSQSTTIPKKQDRVRDHGYDNYMEVEKKIRKVVKFHSLILSQPNHTIAISLLDTLARRL 92

Query: 125 GLE-KKRRLIALLKKFPAVFEVVEEGAFSLKVKLTAEAERLYLEELKIRNEMEGLL---- 184
           GL  K+    A L KFP VFE+ E     +   L     R  L++  IR+E E +L    
Sbjct: 93  GLGFKQHEPGAFLLKFPHVFEIYEHPVQRI---LYCRLTRKALDQ--IRHEHEAVLDQIP 152

Query: 185 --VMKLRKLLMMSVDKRILLEKIAHLRTDFGLPLEFRETICHGYPQYFRVV--ATGRGPA 244
             V +LRKL+MMS   RI LE +   RT+FGLP +F  ++   +PQ+FR++     R   
Sbjct: 153 DAVTRLRKLVMMSNTGRIRLEHVRIARTEFGLPEDFEYSVILKHPQFFRLIDGEETRDKY 212

Query: 245 LELTHWDPELAVSASELAEEENRAIELEEKNLIIDRPLKFNRVRLPKGLNVSKSEMRRIC 304
           +E+   DP L++ A E   E    IE   K +  +       V  P G  + K     + 
Sbjct: 213 IEIVEKDPNLSICAIERVRE----IEYRTKGIDAEDVRFSFVVNFPPGFKIGKYFRIAVW 272

Query: 305 QFRDIPYISPYSDFSGLKAGTPEK----EKHACGVVHEILSLTLEKRTLVDHLTHFREEF 364
           +++ +PY SPY D SG    + E     EK +   +HE+LSLT+EK+  ++ + HFR   
Sbjct: 273 KWQRLPYWSPYEDISGYDLRSMEAQNRLEKRSVACIHELLSLTVEKKITLERIAHFRNVM 332

Query: 365 RFSQQLRGMLIRHPDMFYVSLKGD---RDSVFLREAYRNSQLIDKDRLLIIKEKLRALVA 424
              ++L+  L++H  +FY+S +G+     +VFLRE Y+  +L++ + + + + +L  LV 
Sbjct: 333 NLPKKLKEFLLQHQGIFYISTRGNYGKLHTVFLREGYKRGELVEPNDVYLARRRLAELVL 392

Query: 425 VPRIRGR--GALKNDTDGGDDQPD 428
           +   + +    L    DG DD+ D
Sbjct: 393 MSPRKAKVDAELVRYRDGLDDEDD 407

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BLAST of CmoCh08G001270 vs. TrEMBL
Match: M5X9I6_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa004168mg PE=4 SV=1)

HSP 1 Score: 679.9 bits (1753), Expect = 2.5e-192
Identity = 369/531 (69.49%), Postives = 432/531 (81.36%), Query Frame = 1


Query: 1   MDSMVLFYSPKASLSMSIPFVLPHRGYFFENPSLSVKSE------------FWGKNLDLR 60
           M+  +LF S KAS S S+PF L ++  F   P  S K+             FWG++L L 
Sbjct: 1   MEPKLLFSSTKASPSPSLPFFLSYKSPFLLQPKQSTKTHLSVSKILPEKSLFWGQSLVLH 60

Query: 61  HRNDGFSGSDLRKSRVPFQPIRAIVKRRKELPFDNVIQRDKKLKLVMRIRKILVQHPDRV 120
            R+      +L K+ VPF PI A VKRRKELPFDNVIQ+DKKLKLV++IRKILV  PDRV
Sbjct: 61  GRDVPLG--NLTKNHVPFGPISAAVKRRKELPFDNVIQKDKKLKLVLKIRKILVSQPDRV 120

Query: 121 MSLKELGKFRRDLGLEKKRRLIALLKKFPAVFEVVEEGAFSLKVKLTAEAERLYLEELKI 180
           MSL+ELG++RRDLGL+KKRR IALLKKFPAVFE+VEEG +SL+ KLT EAERLY EELK+
Sbjct: 121 MSLRELGRYRRDLGLQKKRRFIALLKKFPAVFEIVEEGVYSLQFKLTPEAERLYFEELKV 180

Query: 181 RNEMEGLLVMKLRKLLMMSVDKRILLEKIAHLRTDFGLPLEFRETICHGYPQYFRVVATG 240
           RNEME LLV+KLRKLLMMS+DKRILLEKIAHLR D GLPLEFR+TICH YPQ+F+VVAT 
Sbjct: 181 RNEMEDLLVVKLRKLLMMSLDKRILLEKIAHLRNDLGLPLEFRDTICHRYPQFFKVVATA 240

Query: 241 RGPALELTHWDPELAVSASELAEEENRAIELEEKNLIIDRPLKFNRVRLPKGLNVSKSEM 300
           RGPALELTHWDPELAVSA+EL+EEENR  E+EEK+LIIDRPLKFNR++LPKGLN+SK EM
Sbjct: 241 RGPALELTHWDPELAVSAAELSEEENRVREIEEKDLIIDRPLKFNRLKLPKGLNLSKGEM 300

Query: 301 RRICQFRDIPYISPYSDFSGLKAGTPEKEKHACGVVHEILSLTLEKRTLVDHLTHFREEF 360
           RRIC FRDIPYISPYSDFSGL++GT EKEKHAC VVHE+LSLT+EKRTLVDHLTHFREEF
Sbjct: 301 RRICLFRDIPYISPYSDFSGLRSGTIEKEKHACAVVHEMLSLTVEKRTLVDHLTHFREEF 360

Query: 361 RFSQQLRGMLIRHPDMFYVSLKGDRDSVFLREAYRNSQLIDKDRLLIIKEKLRALVAVPR 420
           RFSQQ+RGMLIRHPDMFYVSLKGDRDSVFLREAYR+SQLIDKDRLLIIKEKLR++++VPR
Sbjct: 361 RFSQQVRGMLIRHPDMFYVSLKGDRDSVFLREAYRDSQLIDKDRLLIIKEKLRSIISVPR 420

Query: 421 IRGRGALKNDTDG--GDDQP---DYMSGDESSDIDNLLDDDDEFDDNEDGAFEDNWSDEE 480
              RGA +++ DG  G+D+        G+E SD +N +  DDEFD++ED   ED+WSDE+
Sbjct: 421 FPRRGAPRSEADGAEGNDEAKGGTLEEGEEWSDAENFM-SDDEFDNDEDDD-EDDWSDED 480

Query: 481 DDTPPSFNGDRDGESINIEARKQ-RQVDNSQKLDQSLLSPVLPDGRPRERW 514
           DDTPP F  D DG+++NI   K  +  DNS++ D  +L PVLPDGRPRERW
Sbjct: 481 DDTPPDF--DEDGKTLNIGVSKPVKDEDNSRQNDGKVLVPVLPDGRPRERW 525

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BLAST of CmoCh08G001270 vs. TrEMBL
Match: A0A067H345_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g009820mg PE=4 SV=1)

HSP 1 Score: 672.2 bits (1733), Expect = 5.1e-190
Identity = 365/530 (68.87%), Postives = 426/530 (80.38%), Query Frame = 1


Query: 1   MDSMVLFYSPKASLSMSIPFVLPHRGYFFENPSLSVKS------------EFWGKNLDLR 60
           M+ ++   S KA+LS S P  L ++  F E P L VKS            +FWGK L L 
Sbjct: 1   MEPILFLSSAKATLSPSFPLFLSYKSPFLEKPKLYVKSHLSASTTQVEKSQFWGKGLVL- 60

Query: 61  HRNDGFSGSDLRKSRVPFQPIRAIVKRRKELPFDNVIQRDKKLKLVMRIRKILVQHPDRV 120
           H+  G  G+ + K  +P  P+RA VKRRKELPFDNVIQRDKKLKLV +IRKILV  PDR+
Sbjct: 61  HKRFGSPGN-VNKPHIPVAPVRASVKRRKELPFDNVIQRDKKLKLVSKIRKILVSQPDRI 120

Query: 121 MSLKELGKFRRDLGLEKKRRLIALLKKFPAVFEVVEEGAFSLKVKLTAEAERLYLEELKI 180
           MSLK+LG+FRRDLGL KKRR IALL+KFPAVFE++EEG +SL+ KLT EAERLYLEE+K+
Sbjct: 121 MSLKQLGRFRRDLGLTKKRRFIALLRKFPAVFEIIEEGVYSLRFKLTPEAERLYLEEVKV 180

Query: 181 RNEMEGLLVMKLRKLLMMSVDKRILLEKIAHLRTDFGLPLEFRETICHGYPQYFRVVATG 240
           RNEME LLV KLRKLLMMS++KRILLEKIAHL+TD GLPLEFR+TICH YPQYFRVVAT 
Sbjct: 181 RNEMEDLLVTKLRKLLMMSLEKRILLEKIAHLKTDLGLPLEFRDTICHRYPQYFRVVATE 240

Query: 241 RGPALELTHWDPELAVSASELAEEENRAIELEEKNLIIDRPLKFNRVRLPKGLNVSKSEM 300
           RGPALELTHWDP+LAVSA+ELA EENR  EL+EK+LIIDRPLKFNRV+LPKGLN+SK E 
Sbjct: 241 RGPALELTHWDPQLAVSAAELAAEENRIRELKEKDLIIDRPLKFNRVKLPKGLNLSKGET 300

Query: 301 RRICQFRDIPYISPYSDFSGLKAGTPEKEKHACGVVHEILSLTLEKRTLVDHLTHFREEF 360
           RRICQFRD+PYISPYSDFSGL+ GTPEKEKHACG+VHEILSLT+EK+TLVDHLTHFREEF
Sbjct: 301 RRICQFRDMPYISPYSDFSGLRPGTPEKEKHACGIVHEILSLTVEKKTLVDHLTHFREEF 360

Query: 361 RFSQQLRGMLIRHPDMFYVSLKGDRDSVFLREAYRNSQLIDKDRLLIIKEKLRALVAVPR 420
           RFSQQ+RGMLIRHPDMFYVSLKGDRDSVFLREAYR+SQLIDKDRLL+IKEK RALV+VPR
Sbjct: 361 RFSQQVRGMLIRHPDMFYVSLKGDRDSVFLREAYRDSQLIDKDRLLVIKEKFRALVSVPR 420

Query: 421 IRGRGALKNDTDGGD--DQPDYMSGDESSD--IDNLLDDDDEFDDNEDGAFEDNWSDEED 480
              RGA + D    D  D+P+  SG++  D  ID+ +  D +FDD +DG  ED+WSDE+D
Sbjct: 421 FPKRGAPQKDDHYSDRTDEPEEGSGEDGEDWSIDDYM-TDGQFDDVDDGN-EDDWSDEDD 480

Query: 481 DTPPSFNGDRDGESINI-EARKQRQVDNSQKLDQSLLSPVLPDGRPRERW 514
           D PP F  D D  ++ I E +  + VD+S K  + +L+PV PDGRPRERW
Sbjct: 481 DMPPDF--DEDYGTVKIGENKSAKLVDSSVKKKEKVLAPVFPDGRPRERW 524

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BLAST of CmoCh08G001270 vs. TrEMBL
Match: B9SBK3_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0719440 PE=4 SV=1)

HSP 1 Score: 672.2 bits (1733), Expect = 5.1e-190
Identity = 362/533 (67.92%), Postives = 429/533 (80.49%), Query Frame = 1


Query: 1   MDSMVLFYSPKASLSMSIPFVLPHRGYFFENPSLSVKS------------EFWGKNLDLR 60
           M+  +L  S   S S S+PF L ++  FFE    SVKS            +F GK+L   
Sbjct: 34  MEPKLLLSSVNGSPSTSLPFFLSYKSDFFEKSKFSVKSHFSSSNFSVAKSQFLGKSLVFE 93

Query: 61  HRNDGFSGSDLRKSRVPFQPIRAIVKRRKELPFDNVIQRDKKLKLVMRIRKILVQHPDRV 120
            ++  F GS LRK+  PF P+RA+VKRRKEL FDNVIQRDKKLKLV++IRKILV  PDR+
Sbjct: 94  EKSSQF-GSTLRKTHAPFAPVRAVVKRRKELSFDNVIQRDKKLKLVLKIRKILVSQPDRI 153

Query: 121 MSLKELGKFRRDLGLEKKRRLIALLKKFPAVFEVVEEGAFSLKVKLTAEAERLYLEELKI 180
           MSL++LGK+RR+LGL+K+RR IALLK+FPAVFE+VEEGAF L+ KLT EAERLYLEELK+
Sbjct: 154 MSLRQLGKYRRELGLKKQRRFIALLKQFPAVFEIVEEGAFCLQFKLTPEAERLYLEELKV 213

Query: 181 RNEMEGLLVMKLRKLLMMSVDKRILLEKIAHLRTDFGLPLEFRETICHGYPQYFRVVATG 240
           RNEME LLV+KLRKLLMMS+DKRILLEKIAHL+ DFGLP+EFR+TICH YPQYFRVVAT 
Sbjct: 214 RNEMEDLLVVKLRKLLMMSMDKRILLEKIAHLKNDFGLPVEFRDTICHRYPQYFRVVATE 273

Query: 241 RGPALELTHWDPELAVSASELAEEENRAIELEEKNLIIDRPLKFNRVRLPKGLNVSKSEM 300
           RGPALELTHWDPELAVSA+EL+EEENRA EL+EK+LIIDRPLKFNRV+LPKGL +SKSEM
Sbjct: 274 RGPALELTHWDPELAVSAAELSEEENRARELQEKDLIIDRPLKFNRVKLPKGLQLSKSEM 333

Query: 301 RRICQFRDIPYISPYSDFSGLKAGTPEKEKHACGVVHEILSLTLEKRTLVDHLTHFREEF 360
           RRICQFRD+P+ISPY+DFS LK+GTPEKEKHAC VVHEILSL +EK+TLVDH THFREEF
Sbjct: 334 RRICQFRDMPFISPYADFSHLKSGTPEKEKHACAVVHEILSLCVEKKTLVDHFTHFREEF 393

Query: 361 RFSQQLRGMLIRHPDMFYVSLKGDRDSVFLREAYRNSQLIDKDRLLIIKEKLRALVAVPR 420
           RFSQQLRGMLIRHPDMFYVSLKGDRDSVFLR+AYR+S L+DKDRLL+IKEKLR+LV+VPR
Sbjct: 394 RFSQQLRGMLIRHPDMFYVSLKGDRDSVFLRKAYRDSHLVDKDRLLLIKEKLRSLVSVPR 453

Query: 421 IRGRGALKNDTD---GGDDQPDYM--SGDESSDIDNLLDD---DDEFDDNEDGAFEDNWS 480
              RGA+  + D   G D+Q D     G++ SDID+ +     DD+ DD++D   ED+WS
Sbjct: 454 FPRRGAINKNADKENGSDEQEDASGEEGEDWSDIDSYMSGDGLDDDGDDDDDN--EDDWS 513

Query: 481 DEEDDTPPSFNGDRDGESINIEARKQRQVDNSQKLDQSLLSPVLPDGRPRERW 514
           DEEDDTPP F+ D D   I++ +    Q DNS K ++ +L P  PDG+PRERW
Sbjct: 514 DEEDDTPPDFDEDDDSVRIHV-STSNNQSDNSTKNEKKVLVPAFPDGQPRERW 562

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BLAST of CmoCh08G001270 vs. TrEMBL
Match: A5AR37_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_004914 PE=4 SV=1)

HSP 1 Score: 669.8 bits (1727), Expect = 2.6e-189
Identity = 367/535 (68.60%), Postives = 433/535 (80.93%), Query Frame = 1


Query: 1   MDSMVLFYSPKASLSMSIPFVLPHRGYFFENPSLSVKSE------------FWGKNLDLR 60
           MD+ +L  S KAS S  +PF L  +  FFE P +SVKS             F G +L LR
Sbjct: 1   MDTKLLISSSKASPSTVLPFFLSCKSSFFEKPKVSVKSHLSFTPNHTQKTPFLGGSLVLR 60

Query: 61  HRNDGFSGSDLRKSRVPFQPIRAIVKRRKELPFDNVIQRDKKLKLVMRIRKILVQHPDRV 120
            R D     +LRK+ VP  PIRA VKRRKELPFDNV+QRDKKLKLV++IRK+LV  PDRV
Sbjct: 61  ERVDCLR--NLRKTHVPVGPIRAAVKRRKELPFDNVVQRDKKLKLVLKIRKLLVSQPDRV 120

Query: 121 MSLKELGKFRRDLGLEKKRRLIALLKKFPAVFEVVEEGAFSLKVKLTAEAERLYLEELKI 180
           MSL++LGK+RR+LGL KKRR IALLKKFPA+FE+VEEG +SLK KLT EAERLYLEELKI
Sbjct: 121 MSLRQLGKYRRELGLTKKRRFIALLKKFPAIFEIVEEGVYSLKFKLTPEAERLYLEELKI 180

Query: 181 RNEMEGLLVMKLRKLLMMSVDKRILLEKIAHLRTDFGLPLEFRETICHGYPQYFRVVATG 240
           RNEME LLV+KLRKLLMMS++KRILLEKIAHL+TD GLP EFR+TIC  YPQYF+VV T 
Sbjct: 181 RNEMEDLLVVKLRKLLMMSMEKRILLEKIAHLKTDLGLPSEFRDTICQRYPQYFKVVQTE 240

Query: 241 RGPALELTHWDPELAVSASELAEEENRAIELEEKNLIIDRPLKFNRVRLPKGLNVSKSEM 300
           RGPALELTHWDPELAVSA+E+ EEE R  ELEE++LIIDRP KFNRV+LPKGL++SK EM
Sbjct: 241 RGPALELTHWDPELAVSAAEIWEEEKRVRELEERDLIIDRPPKFNRVKLPKGLSLSKGEM 300

Query: 301 RRICQFRDIPYISPYSDFSGLKAGTPEKEKHACGVVHEILSLTLEKRTLVDHLTHFREEF 360
           RR+ +FRD+PYISPYSDFSGL++G+PEKEKHACGVVHE+LSLT+EKRTLVDHLTHFREEF
Sbjct: 301 RRLSRFRDMPYISPYSDFSGLRSGSPEKEKHACGVVHEMLSLTVEKRTLVDHLTHFREEF 360

Query: 361 RFSQQLRGMLIRHPDMFYVSLKGDRDSVFLREAYRNSQLIDKDRLLIIKEKLRALVAVPR 420
           RFSQQLRGMLIRHPDMFYVSLKGDRDSVFLREAY +SQLI+KDRLL+IKEKLRALV+VPR
Sbjct: 361 RFSQQLRGMLIRHPDMFYVSLKGDRDSVFLREAYSDSQLIEKDRLLVIKEKLRALVSVPR 420

Query: 421 IRGRGALKNDTD--GGDDQPDYMSGDES---SDIDNL----LDDDDEFDDNEDGAFEDNW 480
            R RGA ++D D   G D+ ++ SG+E    SD+DNL    LDDDD+ DD+++   ED+W
Sbjct: 421 FRRRGAPRSDADVVEGTDEQEHGSGEEGEEWSDVDNLMGDGLDDDDDDDDDDE---EDDW 480

Query: 481 SDEEDDTPPSFNGDRDGESINIEARKQ-RQVDNSQKLDQSLLSPVLPDGRPRERW 514
           SDE+D+TPP F  D D  ++  E  K+ +QVDN  K ++ +L P+ PDGRPRERW
Sbjct: 481 SDEDDNTPPDF--DEDDGTMKFELNKEVKQVDNLGKDEEKVLVPMFPDGRPRERW 528

[Close]

BLAST of CmoCh08G001270 vs. TrEMBL
Match: F6I6B4_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_15s0046g01070 PE=4 SV=1)

HSP 1 Score: 669.8 bits (1727), Expect = 2.6e-189
Identity = 367/535 (68.60%), Postives = 433/535 (80.93%), Query Frame = 1


Query: 1   MDSMVLFYSPKASLSMSIPFVLPHRGYFFENPSLSVKSE------------FWGKNLDLR 60
           MD+ +L  S KAS S  +PF L  +  FFE P +SVKS             F G +L LR
Sbjct: 1   MDTKLLISSSKASPSTVLPFFLSCKSSFFEKPKVSVKSHLSFTPNHTQKTPFLGGSLVLR 60

Query: 61  HRNDGFSGSDLRKSRVPFQPIRAIVKRRKELPFDNVIQRDKKLKLVMRIRKILVQHPDRV 120
            R D     +LRK+ VP  PIRA VKRRKELPFDNV+QRDKKLKLV++IRK+LV  PDRV
Sbjct: 61  ERVDCLR--NLRKTHVPVGPIRAAVKRRKELPFDNVVQRDKKLKLVLKIRKLLVSQPDRV 120

Query: 121 MSLKELGKFRRDLGLEKKRRLIALLKKFPAVFEVVEEGAFSLKVKLTAEAERLYLEELKI 180
           MSL++LGK+RR+LGL KKRR IALLKKFPA+FE+VEEG +SLK KLT EAERLYLEELKI
Sbjct: 121 MSLRQLGKYRRELGLTKKRRFIALLKKFPAIFEIVEEGVYSLKFKLTPEAERLYLEELKI 180

Query: 181 RNEMEGLLVMKLRKLLMMSVDKRILLEKIAHLRTDFGLPLEFRETICHGYPQYFRVVATG 240
           RNEME LLV+KLRKLLMMS++KRILLEKIAHL+TD GLP EFR+TIC  YPQYF+VV T 
Sbjct: 181 RNEMEDLLVVKLRKLLMMSMEKRILLEKIAHLKTDLGLPSEFRDTICQRYPQYFKVVQTE 240

Query: 241 RGPALELTHWDPELAVSASELAEEENRAIELEEKNLIIDRPLKFNRVRLPKGLNVSKSEM 300
           RGPALELTHWDPELAVSA+E+ EEE R  ELEE++LIIDRP KFNRV+LPKGL++SK EM
Sbjct: 241 RGPALELTHWDPELAVSAAEIWEEEKRVRELEERDLIIDRPPKFNRVKLPKGLSLSKGEM 300

Query: 301 RRICQFRDIPYISPYSDFSGLKAGTPEKEKHACGVVHEILSLTLEKRTLVDHLTHFREEF 360
           RR+ +FRD+PYISPYSDFSGL++G+PEKEKHACGVVHE+LSLT+EKRTLVDHLTHFREEF
Sbjct: 301 RRLSRFRDMPYISPYSDFSGLRSGSPEKEKHACGVVHEMLSLTVEKRTLVDHLTHFREEF 360

Query: 361 RFSQQLRGMLIRHPDMFYVSLKGDRDSVFLREAYRNSQLIDKDRLLIIKEKLRALVAVPR 420
           RFSQQLRGMLIRHPDMFYVSLKGDRDSVFLREAY +SQLI+KDRLL+IKEKLRALV+VPR
Sbjct: 361 RFSQQLRGMLIRHPDMFYVSLKGDRDSVFLREAYSDSQLIEKDRLLVIKEKLRALVSVPR 420

Query: 421 IRGRGALKNDTD--GGDDQPDYMSGDES---SDIDNL----LDDDDEFDDNEDGAFEDNW 480
            R RGA ++D D   G D+ ++ SG+E    SD+DNL    LDDDD+ DD+++   ED+W
Sbjct: 421 FRRRGAPRSDADVVEGTDEQEHGSGEEGEEWSDVDNLMGDGLDDDDDDDDDDE---EDDW 480

Query: 481 SDEEDDTPPSFNGDRDGESINIEARKQ-RQVDNSQKLDQSLLSPVLPDGRPRERW 514
           SDE+D+TPP F  D D  ++  E  K+ +QVDN  K ++ +L P+ PDGRPRERW
Sbjct: 481 SDEDDNTPPDF--DEDDGTMKFELNKEVKQVDNLGKDEEKVLVPMFPDGRPRERW 528

[Close]

BLAST of CmoCh08G001270 vs. TAIR10
Match: AT4G01037.1 (AT4G01037.1 Ubiquitin carboxyl-terminal hydrolase family protein)

HSP 1 Score: 592.0 bits (1525), Expect = 3.4e-169
Identity = 324/533 (60.79%), Postives = 409/533 (76.74%), Query Frame = 1


Query: 10  PKASLSMSIPFVLPHRGYFFENPSLSVKS------------EFWGKNLDLRHRNDGFSGS 69
           PK  LS   P  +     F E   LSVKS            +F G+ L L ++   +S S
Sbjct: 3   PKLLLSAHKPLFVSCNSPFNEKTKLSVKSGLPMSTIRAARSQFMGEGLILGNKYGFWSTS 62

Query: 70  DLRKSRVPFQPIRAIVKRRKELPFDNVIQRDKKLKLVMRIRKILVQHPDRVMSLKELGKF 129
             RK+RV  +P+RA VKRRKEL FD+V+QRDKKLKLV+ IRKILV  PDR+MSL+ LGK+
Sbjct: 63  --RKTRVVVEPVRAAVKRRKELTFDSVVQRDKKLKLVLNIRKILVSQPDRMMSLRGLGKY 122

Query: 130 RRDLGLEKKRRLIALLKKFPAVFEVVEEGAFSLKVKLTAEAERLYLEELKIRNEMEGLLV 189
           RRDLGL+K+RR IALL+K+P VFE+VEEGA+SL+ K+T+EAERLYL+E++IRNE+E +LV
Sbjct: 123 RRDLGLKKRRRFIALLRKYPGVFEIVEEGAYSLRFKMTSEAERLYLDEMRIRNELEDVLV 182

Query: 190 MKLRKLLMMSVDKRILLEKIAHLRTDFGLPLEFRETICHGYPQYFRVVATGRGPALELTH 249
           +KLRKL+MMS+DKRILLEKI+HL+TD GLPLEFR+TIC  YPQYFRVV T RGPALELTH
Sbjct: 183 VKLRKLVMMSIDKRILLEKISHLKTDLGLPLEFRDTICQRYPQYFRVVPTPRGPALELTH 242

Query: 250 WDPELAVSASELAEEENRAIELEEKNLIIDRPLKFNRVRLPKGLNVSKSEMRRICQFRDI 309
           WDPELAVSA+EL+E++NR  E EE+NLIIDRP KFNRV+LP+GLN+SKSE R+I QFRD+
Sbjct: 243 WDPELAVSAAELSEDDNRTRESEERNLIIDRPPKFNRVKLPRGLNLSKSETRKISQFRDM 302

Query: 310 PYISPYSDFSGLKAGTPEKEKHACGVVHEILSLTLEKRTLVDHLTHFREEFRFSQQLRGM 369
            YISPY DFS L++GT EKEKHACGV+HE+LSLT EKRTLVDHLTHFREEFRFSQQLRGM
Sbjct: 303 QYISPYKDFSHLRSGTLEKEKHACGVIHELLSLTTEKRTLVDHLTHFREEFRFSQQLRGM 362

Query: 370 LIRHPDMFYVSLKGDRDSVFLREAYRNSQLIDKDRLLIIKEKLRALVAVPRIRGRGALKN 429
           LIRHPD+FYVSLKG+RDSVFLREAYRNS+LIDKD L ++KEK+RALV+VPR   RG  + 
Sbjct: 363 LIRHPDLFYVSLKGERDSVFLREAYRNSELIDKDPLTLVKEKMRALVSVPRFPRRGGPRK 422

Query: 430 DTDG-----------GDDQPDYMSGDESSDIDNLLDDDDEFDDNEDGAFEDNWSDE--ED 489
           D +G           G+++ +    +E SD+D  L+ +D  +D +DG    +W+D+  E+
Sbjct: 423 DEEGREVEIDGSDADGEEEEEESDAEEWSDVDGYLEGEDGGND-DDG----DWTDDEGEE 482

Query: 490 DTPPSFNGDRDGE---SINIE-ARKQRQVDNSQKLDQSLLSPVLPDGRPRERW 514
           D PP+F+ D + E   S+ I  +   R+  + +K ++ +L+PV PDG PRE+W
Sbjct: 483 DVPPNFDDDDEDEEEDSVKIGLSPSSRKSSSPRKKEEKVLTPVFPDGTPREKW 528

[Close]

BLAST of CmoCh08G001270 vs. TAIR10
Match: AT5G62990.1 (AT5G62990.1 Ubiquitin carboxyl-terminal hydrolase family protein)

HSP 1 Score: 240.0 bits (611), Expect = 3.3e-63
Identity = 160/424 (37.74%), Postives = 245/424 (57.78%), Query Frame = 1


Query: 82  DNVIQRDKKLKLVMRIRKILVQHPDRVMSLKELGKFRRDLGLEKKRRLIALLKKFPAVFE 141
           D  + +  +++ V ++  +L+  P   + ++ L K R  L +E    ++++++++P +FE
Sbjct: 66  DRHVVKQNRVRFVQKLNTLLLSKPKHYIPIEILYKCRSYLCIENPLAILSMIRRYPTIFE 125

Query: 142 V-----------VEEGAFSLKVKLTAEAERLYLEELKIRNEMEGLLVMKLRKLLMMSVDK 201
           +             +    L V+LT+ A  L ++EL +++E+   L  KL+KLLM+S  +
Sbjct: 126 LFTTPTPHLPMNATKPLSQLCVRLTSAASSLAMQELNLKSEISDKLATKLQKLLMLSSHR 185

Query: 202 RILLEKIAHLRTDFGLPLEFRETICHGYPQYFRVVATGRGPALELTHWDPELAVSASELA 261
           R+LL K+ H+  DFG P  FR  +C+ YP  F+ V T  G ALEL   DPELA   +++ 
Sbjct: 186 RLLLSKLVHIAPDFGFPPNFRSRLCNDYPDKFKTVDTSYGRALELVSSDPELA---NQMP 245

Query: 262 EEENRAIELEEKNLIIDRPLKFNRVRLPKGLNVSKSEMRRICQFRDIPYISPYSDFSG-L 321
             E       ++ LI+DRPLKF R+ L +GLN+ +     + +FR+ P + PY   S  L
Sbjct: 246 SPE------VDRGLIVDRPLKFKRLNLRRGLNLKRRHQGFLIKFRESPDVCPYKMSSDYL 305

Query: 322 KAGTPEKEKHACGVVHEILSLTLEKRTLVDHLTHFREEFRFSQQLRGMLIRHPDMFYVSL 381
            + + E EK AC VV E+L LT+EKRTL+DHLTHFR+EF    +LR +++RHP++FYVS+
Sbjct: 306 ASESIEAEKRACAVVREVLGLTVEKRTLIDHLTHFRKEFSLPNKLRDLIVRHPELFYVSI 365

Query: 382 KGDRDSVFLREAYR-NSQLIDKDRLLIIKEKLRALVAV-PRIRGRGALKNDTDGGDDQPD 441
           KG RDSVFL EAY  N  L+DKD  L+I+E+L  L+    RIR     K  T G     +
Sbjct: 366 KGMRDSVFLVEAYNDNGDLLDKDERLVIRERLIDLIQEGKRIRRERRRKGATLGDKSVEE 425

Query: 442 YMSGDES-SDIDNLLDD--DDEFD---DNEDGAFEDNWSDEEDDTPPSFNGDRDGESINI 486
               DE+  D D+ LDD  +D F+   D+ED   E ++ +E+DD     N    GES+  
Sbjct: 426 KRKDDETIDDYDSDLDDEYEDGFENLFDSEDLGVEYHFDEEDDDDEAGVN----GESVEY 476

[Close]

BLAST of CmoCh08G001270 vs. TAIR10
Match: AT5G21970.1 (AT5G21970.1 Ubiquitin carboxyl-terminal hydrolase family protein)

HSP 1 Score: 181.8 bits (460), Expect = 1.1e-45
Identity = 138/407 (33.91%), Postives = 212/407 (52.09%), Query Frame = 1


Query: 70  RAIVKRRKELPFDNVIQRDKKLKLVMRIRKILVQHPDRVMSLKELGKFRRDLGLEKKRRL 129
           R+  KR +EL      ++ K    V+ + ++L    D +M+++   ++RR + L K  ++
Sbjct: 52  RSREKRVQELEI--ATEKWKIASKVIFLMEVLKGERDMIMTVRSFEQYRRQINLPKPHKI 111

Query: 130 IALLKKFPAVFEVVEEGAFSLKVKLTAEAERLYLEELKIRNEMEGLLVMKLRKLLMMSVD 189
              ++K P +FE+ ++    L   LT   E L  E  K+  E        + + LMMSVD
Sbjct: 112 SDFIRKSPKLFELYKDQRGVLWCGLTEGGEDLLDEHDKLLEENGDKAAEHVTRCLMMSVD 171

Query: 190 KRILLEKIAHLRTDFGLPLEFRETICHGYPQYFRVVATGRGPA-LELTHWDPELAVSASE 249
           K++ L+KI H R DFGLPL+FR    + +PQ+F+VV  G G   LEL  W+P  A++   
Sbjct: 172 KKLPLDKIVHFRRDFGLPLDFRINWVYNFPQHFKVVKLGDGEEYLELVSWNPAWAIT--- 231

Query: 250 LAEEENRAIELEEK------NLIIDRPLKFNRVRLPKGLNVSKSEMRRICQFRDIPYISP 309
             E E + + + E        L +  P+KF     P           +I  F+   Y+SP
Sbjct: 232 --ELEKKTLGITEDCEHKPGMLSLAFPMKF-----PPSYKKMYRYRGKIEHFQKRSYLSP 291

Query: 310 YSDFSGLKAGTPEKEKHACGVVHEILSLTLEKRTLVDHLTHFREEFRFSQQLRGMLIRHP 369
           Y+D  GL+AG+ E +K A  V+HE+LS TLEKR + DHLTHFR EF   Q+L  + ++H 
Sbjct: 292 YADARGLEAGSKEFDKRAIAVMHELLSFTLEKRLVTDHLTHFRREFVMPQKLMRIFLKHC 351

Query: 370 DMFYVSLKGDRDSVFLREAYRNSQLIDKDRLLIIKEKLRALVAVPRIRGRGALKNDT--- 429
            +FYVS +G R SVFL E Y   +LI+K  L++ KEKL         +      +DT   
Sbjct: 352 GIFYVSERGKRFSVFLTEGYEGPELIEKCPLILWKEKLLKFTGYRGRKRDIQTYSDTLDM 411

Query: 430 -------DGGDDQPDYMSGDESSDIDNLLDDDDEFDDNE-DGAFEDN 459
                   G  D+   +  ++  D D+++ DDDE D  E + A+E+N
Sbjct: 412 EERELLESGSGDEDLSVGFEKDGDYDDVVTDDDEMDIGEVNDAYEEN 446

[Close]

BLAST of CmoCh08G001270 vs. TAIR10
Match: AT3G63090.1 (AT3G63090.1 Ubiquitin carboxyl-terminal hydrolase family protein)

HSP 1 Score: 175.3 bits (443), Expect = 1.0e-43
Identity = 123/336 (36.61%), Postives = 182/336 (54.17%), Query Frame = 1


Query: 76  RKELPFDNVIQRDKKLKLVMRIRKILVQHPDRVMSLKELGKFRRDLGLEKKRRLIALLKK 135
           +K+   D  I++DK+ KL  R+ K ++  P +V+ L+ L K R  L L  K +  + ++ 
Sbjct: 39  KKDTRLDEAIEQDKRYKLCARVVKEVLNEPGQVIPLRYLEKRRERLRLTFKAK--SFVEM 98

Query: 136 FPAVFEV----VEEGAFSLKVKLTAEAERLYL-EELKIRNEMEGLLVMKLRKLLMMSVDK 195
            P++FE+    ++  +  ++        R +L EE +I +E E LLV KL +LLMM+ DK
Sbjct: 99  NPSLFEIYYDRIKPKSDPVQFLRPTPRLRAFLDEEQRIYSENEPLLVSKLCQLLMMAKDK 158

Query: 196 RILLEKIAHLRTDFGLPLEFRETICHGYPQYFRVVATGRGPA--LELTHWDPELAVSASE 255
            I  +K+ H++ DFG P +F   +   YP YFR+          LEL  W+P+ A S  E
Sbjct: 159 VISADKLVHVKRDFGFPNDFLMKLVQKYPNYFRLTGLPEEGKSFLELVSWNPDFAKSKIE 218

Query: 256 LAEEENRAIELEEKNLIIDRPLKFNRVRLPKGLNVSKSEMRRICQFRDIPYISPYSDFSG 315
           L  E+        K  +  RP  +N V+LP G  + K        + +  YISPY D S 
Sbjct: 219 LRAEDETL-----KTGVRIRP-NYN-VKLPSGFFLRKEMREWTRDWLEQDYISPYEDVSH 278

Query: 316 LKAGTPEKEKHACGVVHEILSLTLEKRTLVDHLTHFREEFRFSQQLRGMLIRHPDMFYVS 375
           L   + E EK   GVVHE+LSL+L KR  V  L  F +EFRFS     +  RH  +FY+S
Sbjct: 279 LDQASKEMEKRTVGVVHELLSLSLLKRVPVPTLGKFCDEFRFSNAFSSVFTRHSGIFYLS 338

Query: 376 LKGDRDSVFLREAYRNSQLIDKDRLLIIKEKLRALV 405
           LKG   +  LREAY++ +L+D+D LL IK+K   L+
Sbjct: 339 LKGGIKTAVLREAYKDDELVDRDPLLAIKDKFLRLL 365

[Close]

BLAST of CmoCh08G001270 vs. TAIR10
Match: AT4G08940.1 (AT4G08940.1 Ubiquitin carboxyl-terminal hydrolase family protein)

HSP 1 Score: 174.1 bits (440), Expect = 2.2e-43
Identity = 117/334 (35.03%), Postives = 180/334 (53.89%), Query Frame = 1


Query: 70  RAIVKRRKELP-FDNVIQRDKKLKLVMRIRKILVQHPDRVMSLKELGKFRRDLGLEKKRR 129
           ++I     +LP  ++++ RD   + ++R ++ + + P+R++ L + GK  R+LG  + R+
Sbjct: 59  KSIQHESTKLPHLESLVSRDAHFRFLIRSKEFISKQPERILRLDDAGKLYRELGFPRGRK 118

Query: 130 LIALLKKFPAVFEVVEEGAFSLKVKLTAEAERLYLEELKIRNEMEGLLVMKLRKLLMMSV 189
           +   + K P +F+        + +  T   E L  EE  +   ME   V  +RKLLMM+ 
Sbjct: 119 VTKFIPKHPLIFQTYRHSDGKIWLGFTEFMEDLLDEEKGLMESMELDRVNCVRKLLMMTK 178

Query: 190 DKRILLEKIAHLRTDFGLPLEFRETICHGYPQYFRVVATGRG-PALELTHWDPELAVSAS 249
           DKRILL KI H R  FG+P +FR+ +   YP YFRVV  G G   LEL +WD  LAVS  
Sbjct: 179 DKRILLSKIHHTRLLFGIPEDFRDRVAK-YPDYFRVVTGGDGNRVLELVNWDTNLAVS-- 238

Query: 250 ELAEEENRAIELEEKNLIIDRPLKFNRVRLPKGLNVSKSEMRRICQFRDIPYISPYSDFS 309
               E  R   ++E      R  KF  V+  K L + + + R++      P +SPYSD  
Sbjct: 239 ----ELERLFMIDEDK--AKRVFKF-PVKHGKELELEEKDTRKLNLLNTFPLVSPYSDGW 298

Query: 310 GLKAGTPEKEKHACGVVHEILSLTLEKRTLVDHLTHFREEFRFSQQLRGMLIRHPDMFYV 369
            L   + E EK+  G+VHE L+LTLEKR  + H+  F++EF  ++Q   ML +    FY+
Sbjct: 299 KLDVWSLEAEKYRVGIVHEFLNLTLEKRASIHHIVEFKDEFSLTRQTYQMLKKQSMSFYL 358

Query: 370 SLKGDRDSVFLREAY-RNSQLIDKDRLLIIKEKL 401
           +      +VFL++AY  N  L+ KD  ++  EKL
Sbjct: 359 AGTEMNWTVFLKDAYDENGVLVSKDPQVVFNEKL 382

[Close]

BLAST of CmoCh08G001270 vs. NCBI nr
Match: gi|659123163|ref|XP_008461525.1| (PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucumis melo])

HSP 1 Score: 826.6 bits (2134), Expect = 2.3e-236
Identity = 440/520 (84.62%), Postives = 473/520 (90.96%), Query Frame = 1


Query: 1   MDSMVLFYSPKASLSMSIPFVLPHRGYFFENPSLSVKSEFWGKNLDLRHRNDGFSGSDLR 60
           MDS +L YSPKASLS+S+PF+L H+ Y+      SVKS+FWGKNLDLR+RND     +LR
Sbjct: 1   MDSKLLLYSPKASLSISVPFILGHKSYY------SVKSQFWGKNLDLRNRND-----NLR 60

Query: 61  KSRVPFQPIRAIVKRRKELPFDNVIQRDKKLKLVMRIRKILVQHPDRVMSLKELGKFRRD 120
           K+  PFQPIRA+VKRRKELPFDNVIQRDKKLKLVMRIRKILVQ PDRVMSLKELGKFRRD
Sbjct: 61  KAHDPFQPIRAVVKRRKELPFDNVIQRDKKLKLVMRIRKILVQQPDRVMSLKELGKFRRD 120

Query: 121 LGLEKKRRLIALLKKFPAVFEVVEEGAFSLKVKLTAEAERLYLEELKIRNEMEGLLVMKL 180
           LGLEKKRRLIALLKKFPAVFEVVEEGAFSLK KLTAEAERLYLEELKIRNEMEGLLV+KL
Sbjct: 121 LGLEKKRRLIALLKKFPAVFEVVEEGAFSLKFKLTAEAERLYLEELKIRNEMEGLLVIKL 180

Query: 181 RKLLMMSVDKRILLEKIAHLRTDFGLPLEFRETICHGYPQYFRVVATGRGPALELTHWDP 240
           RKLLMMS DKRILLEKIAHLRTDFGLPLEFR+TICH YPQYFRVVAT RGPALELTHWDP
Sbjct: 181 RKLLMMSADKRILLEKIAHLRTDFGLPLEFRDTICHRYPQYFRVVATERGPALELTHWDP 240

Query: 241 ELAVSASELAEEENRAIELEEKNLIIDRPLKFNRVRLPKGLNVSKSEMRRICQFRDIPYI 300
           ELAVSA+ELAEEENRA ELEEKNLIIDRPLKFNRV+LPKGLN+SKSEMR+I QFRDIPYI
Sbjct: 241 ELAVSAAELAEEENRARELEEKNLIIDRPLKFNRVKLPKGLNLSKSEMRKISQFRDIPYI 300

Query: 301 SPYSDFSGLKAGTPEKEKHACGVVHEILSLTLEKRTLVDHLTHFREEFRFSQQLRGMLIR 360
           SPYSDFSG+KAGTP+KEKHACGVVHEIL+LTLEKRTLVDHLTHFREEFRFSQQLRGMLIR
Sbjct: 301 SPYSDFSGIKAGTPQKEKHACGVVHEILNLTLEKRTLVDHLTHFREEFRFSQQLRGMLIR 360

Query: 361 HPDMFYVSLKGDRDSVFLREAYRNSQLIDKDRLLIIKEKLRALVAVPRIRGRGALKNDTD 420
           HPDMFYVSLKGDRDSVFLREAYR+SQLIDKDRLLIIKEKLRALVAVPR R RGA   DT 
Sbjct: 361 HPDMFYVSLKGDRDSVFLREAYRDSQLIDKDRLLIIKEKLRALVAVPRFRSRGASNGDTK 420

Query: 421 GGD-DQPDYMSGDESSDIDNLLD------DDDEFDDNEDGAFEDNWSDEEDDTPPSFNGD 480
           GGD +QP  MSG+E SD+DNLLD      DDDEFDD+ + AFED+WSD EDDTPPSFNGD
Sbjct: 421 GGDTNQPSDMSGEEWSDVDNLLDDDDDEFDDDEFDDDNNEAFEDDWSD-EDDTPPSFNGD 480

Query: 481 RDGESINIEARKQRQVDNSQKLDQSLLSPVLPDGRPRERW 514
           +DGESINI +RKQ+QV++ QK+ QS LSPVLPDGRPRERW
Sbjct: 481 QDGESINIGSRKQKQVNDLQKVGQSRLSPVLPDGRPRERW 508

[Close]

BLAST of CmoCh08G001270 vs. NCBI nr
Match: gi|449443941|ref|XP_004139734.1| (PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucumis sativus])

HSP 1 Score: 810.1 bits (2091), Expect = 2.3e-231
Identity = 427/520 (82.12%), Postives = 470/520 (90.38%), Query Frame = 1


Query: 1   MDSMVLFYSPKASLSMSIPFVLPHRGYFFENPSLSVKSEFWGKNLDLRHRNDGFSGSDLR 60
           MDS +L YSPKASLS+S+PF+L H+ Y+      SVKS+FWGKNLDLR+RND     +LR
Sbjct: 1   MDSKLLLYSPKASLSISVPFILGHKSYY------SVKSQFWGKNLDLRNRND-----NLR 60

Query: 61  KSRVPFQPIRAIVKRRKELPFDNVIQRDKKLKLVMRIRKILVQHPDRVMSLKELGKFRRD 120
           KS VPFQPIRA+VKRRKELPFDNVIQ+DKKLKL +RIRKILVQ PDRVMSLK+LG+FR+D
Sbjct: 61  KSHVPFQPIRAVVKRRKELPFDNVIQKDKKLKLALRIRKILVQQPDRVMSLKDLGRFRKD 120

Query: 121 LGLEKKRRLIALLKKFPAVFEVVEEGAFSLKVKLTAEAERLYLEELKIRNEMEGLLVMKL 180
           LGLE+KRR+IALLKKFPAVFEVVEEGAF+LK KLTAEAERLYLEELKIRNEMEGLLV+KL
Sbjct: 121 LGLERKRRIIALLKKFPAVFEVVEEGAFALKFKLTAEAERLYLEELKIRNEMEGLLVIKL 180

Query: 181 RKLLMMSVDKRILLEKIAHLRTDFGLPLEFRETICHGYPQYFRVVATGRGPALELTHWDP 240
           RKLLMMS DKRILLEKIAHLRTD GLPLEFR+TICH YPQYFRVVAT RGPALELTHWDP
Sbjct: 181 RKLLMMSADKRILLEKIAHLRTDLGLPLEFRDTICHRYPQYFRVVATKRGPALELTHWDP 240

Query: 241 ELAVSASELAEEENRAIELEEKNLIIDRPLKFNRVRLPKGLNVSKSEMRRICQFRDIPYI 300
           ELAVSA+ELAEEENRA ELEEKNLIIDRPLKFNRV+LPKGLN+SK EMR+I QFRDIPYI
Sbjct: 241 ELAVSAAELAEEENRARELEEKNLIIDRPLKFNRVKLPKGLNLSKGEMRKISQFRDIPYI 300

Query: 301 SPYSDFSGLKAGTPEKEKHACGVVHEILSLTLEKRTLVDHLTHFREEFRFSQQLRGMLIR 360
           SPYSDFSGLKAGTP KEKHAC VVHEIL+LTLEKRTLVDHLTHFREEFRFSQQLRGMLIR
Sbjct: 301 SPYSDFSGLKAGTPPKEKHACAVVHEILNLTLEKRTLVDHLTHFREEFRFSQQLRGMLIR 360

Query: 361 HPDMFYVSLKGDRDSVFLREAYRNSQLIDKDRLLIIKEKLRALVAVPRIRGRGALKNDTD 420
           HPDMFYVSLKGDRDSVFLREAYR SQLIDKDRLLIIKEKLR LV VPR+RGRGA  +DT 
Sbjct: 361 HPDMFYVSLKGDRDSVFLREAYRGSQLIDKDRLLIIKEKLRVLVTVPRLRGRGASNSDTK 420

Query: 421 GGD-DQPDYMSGDESSDIDNLLD------DDDEFDDNEDGAFEDNWSDEEDDTPPSFNGD 480
           GGD DQP+ MSG+E SD+D+LLD      DDDEFDD+ +GAFED+W+D EDDTPPSF+GD
Sbjct: 421 GGDTDQPNDMSGEEWSDVDDLLDDDDDEFDDDEFDDDNNGAFEDDWND-EDDTPPSFDGD 480

Query: 481 RDGESINIEARKQRQVDNSQKLDQSLLSPVLPDGRPRERW 514
            DGESINI +RKQ+QV++ QK+DQS LSPVLPDG+ RE+W
Sbjct: 481 EDGESINIGSRKQKQVNDLQKVDQSPLSPVLPDGKHREKW 508

[Close]

BLAST of CmoCh08G001270 vs. NCBI nr
Match: gi|1009142386|ref|XP_015888696.1| (PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Ziziphus jujuba])

HSP 1 Score: 681.8 bits (1758), Expect = 9.3e-193
Identity = 367/531 (69.11%), Postives = 433/531 (81.54%), Query Frame = 1


Query: 1   MDSMVLFYSPKASLSMSIPFVLPHRGYFFENPSLSVKS------------EFWGKNLDLR 60
           M+  +LF +PK + S S+PF L ++  F + P  SVKS            +FWG +L L+
Sbjct: 1   MEPKLLFSAPKTTSSTSLPFFLSYKSPFLQKPKFSVKSPLSISTIQAEKSQFWGNSLVLQ 60

Query: 61  HRNDGFSGSDLRKSRVPFQPIRAIVKRRKELPFDNVIQRDKKLKLVMRIRKILVQHPDRV 120
            RN   + S+L  + + F+PIRA VKRRKELPFDNVIQRDKKLKLV++IRKIL+  PDR+
Sbjct: 61  DRN--VASSNLIVNHLSFRPIRAAVKRRKELPFDNVIQRDKKLKLVLKIRKILLGQPDRI 120

Query: 121 MSLKELGKFRRDLGLEKKRRLIALLKKFPAVFEVVEEGAFSLKVKLTAEAERLYLEELKI 180
           MSL+ELG++RRDLGL+KKRR IALLKKFPA+FE+VEEG FSLK KLT EAERLY EELK+
Sbjct: 121 MSLRELGRYRRDLGLKKKRRFIALLKKFPAIFEIVEEGVFSLKFKLTPEAERLYFEELKV 180

Query: 181 RNEMEGLLVMKLRKLLMMSVDKRILLEKIAHLRTDFGLPLEFRETICHGYPQYFRVVATG 240
           RNEME LLV+KLRKLLMMS++KRILLEKIAHL+TDFGLP+EFR+TIC  YPQYF+VVAT 
Sbjct: 181 RNEMEDLLVVKLRKLLMMSLEKRILLEKIAHLKTDFGLPMEFRDTICQRYPQYFKVVATE 240

Query: 241 RGPALELTHWDPELAVSASELAEEENRAIELEEKNLIIDRPLKFNRVRLPKGLNVSKSEM 300
           RGPALELTHWDPELAVSA+EL+EEENRA ELEEKNLIIDRP KFNRV+LPKGLN+SK EM
Sbjct: 241 RGPALELTHWDPELAVSAAELSEEENRARELEEKNLIIDRPPKFNRVKLPKGLNLSKGEM 300

Query: 301 RRICQFRDIPYISPYSDFSGLKAGTPEKEKHACGVVHEILSLTLEKRTLVDHLTHFREEF 360
           RRIC+FRD+PYISPYSDFSGLK+GT EKEKHAC VVHEILSLT+EKRTLVDHLTHFREEF
Sbjct: 301 RRICRFRDMPYISPYSDFSGLKSGTAEKEKHACAVVHEILSLTVEKRTLVDHLTHFREEF 360

Query: 361 RFSQQLRGMLIRHPDMFYVSLKGDRDSVFLREAYRNSQLIDKDRLLIIKEKLRALVAVPR 420
           RFSQQLRGMLIRHPDMFYVSLKGDRDSVFLREAYR+S+L+DKDRLLIIKEKLR+LV+VPR
Sbjct: 361 RFSQQLRGMLIRHPDMFYVSLKGDRDSVFLREAYRDSRLVDKDRLLIIKEKLRSLVSVPR 420

Query: 421 IRGRGALKNDTD--GGDDQPDYMSG---DESSDIDNLLDDDDEFDDNEDGAFEDNWSDEE 480
              RG  + D D   G D+P+  +G   +E + ID+ + DD   D+ +D   ED+WS+E+
Sbjct: 421 FPRRGVPQKDADLKEGTDEPEDGTGEGEEEWASIDDFMSDDGSDDEEDD---EDDWSNED 480

Query: 481 DDTPPSFNGDRDGESINIEARKQRQVD-NSQKLDQSLLSPVLPDGRPRERW 514
           DDTPP F  D DG+++NI  +K  + D NS K    +L PV PDGRPRERW
Sbjct: 481 DDTPPDF--DEDGDTLNIGVQKPVKQDVNSTKHSAKVLHPVAPDGRPRERW 524

[Close]

BLAST of CmoCh08G001270 vs. NCBI nr
Match: gi|596113551|ref|XP_007221558.1| (hypothetical protein PRUPE_ppa004168mg [Prunus persica])

HSP 1 Score: 679.9 bits (1753), Expect = 3.5e-192
Identity = 369/531 (69.49%), Postives = 432/531 (81.36%), Query Frame = 1


Query: 1   MDSMVLFYSPKASLSMSIPFVLPHRGYFFENPSLSVKSE------------FWGKNLDLR 60
           M+  +LF S KAS S S+PF L ++  F   P  S K+             FWG++L L 
Sbjct: 1   MEPKLLFSSTKASPSPSLPFFLSYKSPFLLQPKQSTKTHLSVSKILPEKSLFWGQSLVLH 60

Query: 61  HRNDGFSGSDLRKSRVPFQPIRAIVKRRKELPFDNVIQRDKKLKLVMRIRKILVQHPDRV 120
            R+      +L K+ VPF PI A VKRRKELPFDNVIQ+DKKLKLV++IRKILV  PDRV
Sbjct: 61  GRDVPLG--NLTKNHVPFGPISAAVKRRKELPFDNVIQKDKKLKLVLKIRKILVSQPDRV 120

Query: 121 MSLKELGKFRRDLGLEKKRRLIALLKKFPAVFEVVEEGAFSLKVKLTAEAERLYLEELKI 180
           MSL+ELG++RRDLGL+KKRR IALLKKFPAVFE+VEEG +SL+ KLT EAERLY EELK+
Sbjct: 121 MSLRELGRYRRDLGLQKKRRFIALLKKFPAVFEIVEEGVYSLQFKLTPEAERLYFEELKV 180

Query: 181 RNEMEGLLVMKLRKLLMMSVDKRILLEKIAHLRTDFGLPLEFRETICHGYPQYFRVVATG 240
           RNEME LLV+KLRKLLMMS+DKRILLEKIAHLR D GLPLEFR+TICH YPQ+F+VVAT 
Sbjct: 181 RNEMEDLLVVKLRKLLMMSLDKRILLEKIAHLRNDLGLPLEFRDTICHRYPQFFKVVATA 240

Query: 241 RGPALELTHWDPELAVSASELAEEENRAIELEEKNLIIDRPLKFNRVRLPKGLNVSKSEM 300
           RGPALELTHWDPELAVSA+EL+EEENR  E+EEK+LIIDRPLKFNR++LPKGLN+SK EM
Sbjct: 241 RGPALELTHWDPELAVSAAELSEEENRVREIEEKDLIIDRPLKFNRLKLPKGLNLSKGEM 300

Query: 301 RRICQFRDIPYISPYSDFSGLKAGTPEKEKHACGVVHEILSLTLEKRTLVDHLTHFREEF 360
           RRIC FRDIPYISPYSDFSGL++GT EKEKHAC VVHE+LSLT+EKRTLVDHLTHFREEF
Sbjct: 301 RRICLFRDIPYISPYSDFSGLRSGTIEKEKHACAVVHEMLSLTVEKRTLVDHLTHFREEF 360

Query: 361 RFSQQLRGMLIRHPDMFYVSLKGDRDSVFLREAYRNSQLIDKDRLLIIKEKLRALVAVPR 420
           RFSQQ+RGMLIRHPDMFYVSLKGDRDSVFLREAYR+SQLIDKDRLLIIKEKLR++++VPR
Sbjct: 361 RFSQQVRGMLIRHPDMFYVSLKGDRDSVFLREAYRDSQLIDKDRLLIIKEKLRSIISVPR 420

Query: 421 IRGRGALKNDTDG--GDDQP---DYMSGDESSDIDNLLDDDDEFDDNEDGAFEDNWSDEE 480
              RGA +++ DG  G+D+        G+E SD +N +  DDEFD++ED   ED+WSDE+
Sbjct: 421 FPRRGAPRSEADGAEGNDEAKGGTLEEGEEWSDAENFM-SDDEFDNDEDDD-EDDWSDED 480

Query: 481 DDTPPSFNGDRDGESINIEARKQ-RQVDNSQKLDQSLLSPVLPDGRPRERW 514
           DDTPP F  D DG+++NI   K  +  DNS++ D  +L PVLPDGRPRERW
Sbjct: 481 DDTPPDF--DEDGKTLNIGVSKPVKDEDNSRQNDGKVLVPVLPDGRPRERW 525

[Close]

BLAST of CmoCh08G001270 vs. NCBI nr
Match: gi|223537460|gb|EEF39088.1| (conserved hypothetical protein [Ricinus communis])

HSP 1 Score: 672.2 bits (1733), Expect = 7.4e-190
Identity = 362/533 (67.92%), Postives = 429/533 (80.49%), Query Frame = 1


Query: 1   MDSMVLFYSPKASLSMSIPFVLPHRGYFFENPSLSVKS------------EFWGKNLDLR 60
           M+  +L  S   S S S+PF L ++  FFE    SVKS            +F GK+L   
Sbjct: 34  MEPKLLLSSVNGSPSTSLPFFLSYKSDFFEKSKFSVKSHFSSSNFSVAKSQFLGKSLVFE 93

Query: 61  HRNDGFSGSDLRKSRVPFQPIRAIVKRRKELPFDNVIQRDKKLKLVMRIRKILVQHPDRV 120
            ++  F GS LRK+  PF P+RA+VKRRKEL FDNVIQRDKKLKLV++IRKILV  PDR+
Sbjct: 94  EKSSQF-GSTLRKTHAPFAPVRAVVKRRKELSFDNVIQRDKKLKLVLKIRKILVSQPDRI 153

Query: 121 MSLKELGKFRRDLGLEKKRRLIALLKKFPAVFEVVEEGAFSLKVKLTAEAERLYLEELKI 180
           MSL++LGK+RR+LGL+K+RR IALLK+FPAVFE+VEEGAF L+ KLT EAERLYLEELK+
Sbjct: 154 MSLRQLGKYRRELGLKKQRRFIALLKQFPAVFEIVEEGAFCLQFKLTPEAERLYLEELKV 213

Query: 181 RNEMEGLLVMKLRKLLMMSVDKRILLEKIAHLRTDFGLPLEFRETICHGYPQYFRVVATG 240
           RNEME LLV+KLRKLLMMS+DKRILLEKIAHL+ DFGLP+EFR+TICH YPQYFRVVAT 
Sbjct: 214 RNEMEDLLVVKLRKLLMMSMDKRILLEKIAHLKNDFGLPVEFRDTICHRYPQYFRVVATE 273

Query: 241 RGPALELTHWDPELAVSASELAEEENRAIELEEKNLIIDRPLKFNRVRLPKGLNVSKSEM 300
           RGPALELTHWDPELAVSA+EL+EEENRA EL+EK+LIIDRPLKFNRV+LPKGL +SKSEM
Sbjct: 274 RGPALELTHWDPELAVSAAELSEEENRARELQEKDLIIDRPLKFNRVKLPKGLQLSKSEM 333

Query: 301 RRICQFRDIPYISPYSDFSGLKAGTPEKEKHACGVVHEILSLTLEKRTLVDHLTHFREEF 360
           RRICQFRD+P+ISPY+DFS LK+GTPEKEKHAC VVHEILSL +EK+TLVDH THFREEF
Sbjct: 334 RRICQFRDMPFISPYADFSHLKSGTPEKEKHACAVVHEILSLCVEKKTLVDHFTHFREEF 393

Query: 361 RFSQQLRGMLIRHPDMFYVSLKGDRDSVFLREAYRNSQLIDKDRLLIIKEKLRALVAVPR 420
           RFSQQLRGMLIRHPDMFYVSLKGDRDSVFLR+AYR+S L+DKDRLL+IKEKLR+LV+VPR
Sbjct: 394 RFSQQLRGMLIRHPDMFYVSLKGDRDSVFLRKAYRDSHLVDKDRLLLIKEKLRSLVSVPR 453

Query: 421 IRGRGALKNDTD---GGDDQPDYM--SGDESSDIDNLLDD---DDEFDDNEDGAFEDNWS 480
              RGA+  + D   G D+Q D     G++ SDID+ +     DD+ DD++D   ED+WS
Sbjct: 454 FPRRGAINKNADKENGSDEQEDASGEEGEDWSDIDSYMSGDGLDDDGDDDDDN--EDDWS 513

Query: 481 DEEDDTPPSFNGDRDGESINIEARKQRQVDNSQKLDQSLLSPVLPDGRPRERW 514
           DEEDDTPP F+ D D   I++ +    Q DNS K ++ +L P  PDG+PRERW
Sbjct: 514 DEEDDTPPDFDEDDDSVRIHV-STSNNQSDNSTKNEKKVLVPAFPDGQPRERW 562

The following BLAST results are available for this feature:

BLAST of CmoCh08G001270 vs. Swiss-Prot


Match Name	E-value	Identity	Description
RPD1_ARATH	1.1e-36	30.21	Protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Arabidopsis thaliana GN=RPD1 PE=1 SV=1	[more]

BLAST of CmoCh08G001270 vs. TrEMBL


Match Name	E-value	Identity	Description
M5X9I6_PRUPE	2.5e-192	69.49	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa004168mg PE=4 SV=1	[more]
A0A067H345_CITSI	5.1e-190	68.87	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g009820mg PE=4 SV=1	[more]
B9SBK3_RICCO	5.1e-190	67.92	Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0719440 PE=4 SV=1	[more]
A5AR37_VITVI	2.6e-189	68.60	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_004914 PE=4 SV=1	[more]
F6I6B4_VITVI	2.6e-189	68.60	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_15s0046g01070 PE=4 SV=...	[more]

BLAST of CmoCh08G001270 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G01037.1	3.4e-169	60.79	Ubiquitin carboxyl-terminal hydrolase family protein	[more]
AT5G62990.1	3.3e-63	37.74	Ubiquitin carboxyl-terminal hydrolase family protein	[more]
AT5G21970.1	1.1e-45	33.91	Ubiquitin carboxyl-terminal hydrolase family protein	[more]
AT3G63090.1	1.0e-43	36.61	Ubiquitin carboxyl-terminal hydrolase family protein	[more]
AT4G08940.1	2.2e-43	35.03	Ubiquitin carboxyl-terminal hydrolase family protein	[more]

BLAST of CmoCh08G001270 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659123163\|ref\|XP_008461525.1\|	2.3e-236	84.62	PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucumis melo]	[more]
gi\|449443941\|ref\|XP_004139734.1\|	2.3e-231	82.12	PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucumis sativus]	[more]
gi\|1009142386\|ref\|XP_015888696.1\|	9.3e-193	69.11	PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Ziziphus jujuba]	[more]
gi\|596113551\|ref\|XP_007221558.1\|	3.5e-192	69.49	hypothetical protein PRUPE_ppa004168mg [Prunus persica]	[more]
gi\|223537460\|gb\|EEF39088.1\|	7.4e-190	67.92	conserved hypothetical protein [Ricinus communis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR021099	PORR_domain

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0008152	metabolic process
biological_process	GO:0000373	Group II intron splicing
biological_process	GO:0015979	photosynthesis
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0009507	chloroplast
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0016787	hydrolase activity
molecular_function	GO:0003723	RNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh08G001270.1	CmoCh08G001270.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR021099	Plant organelle RNA recognition domain	PFAM	PF11955	PORR	coord: 77..405 score: 6.3E
None	No IPR available	unknown	Coil	Coil	coord: 242..262 scor
None	No IPR available	PANTHER	PTHR31476	FAMILY NOT NAMED	coord: 1..492 score: 3.6E
None	No IPR available	PANTHER	PTHR31476:SF4	RNA RECOGNITION DOMAIN-CONTAINING PROTEIN WTF1	coord: 1..492 score: 3.6E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh08G001270	Cucsa.078920	Cucumber (Gy14) v1	cgycmoB0138
CmoCh08G001270	CmaCh17G005640	Cucurbita maxima (Rimu)	cmacmoB372
CmoCh08G001270	Cla015008	Watermelon (97103) v1	cmowmB841
CmoCh08G001270	Csa7G327750	Cucumber (Chinese Long) v2	cmocuB909
CmoCh08G001270	MELO3C023725	Melon (DHL92) v3.5.1	cmomeB813
CmoCh08G001270	ClCG09G009550	Watermelon (Charleston Gray)	cmowcgB783
CmoCh08G001270	CSPI07G13460	Wild cucumber (PI 183967)	cmocpiB923
CmoCh08G001270	Lsi02G020290	Bottle gourd (USVL1VR-Ls)	cmolsiB816
CmoCh08G001270	Cp4.1LG12g04780	Cucurbita pepo (Zucchini)	cmocpeB838
CmoCh08G001270	Cp4.1LG17g10250	Cucurbita pepo (Zucchini)	cmocpeB851
CmoCh08G001270	MELO3C023725.2	Melon (DHL92) v3.6.1	cmomedB916
CmoCh08G001270	CsaV3_7G025270	Cucumber (Chinese Long) v3	cmocucB1076
CmoCh08G001270	Cla97C09G172400	Watermelon (97103) v2	cmowmbB914
CmoCh08G001270	Bhi09G001206	Wax gourd	cmowgoB1124
CmoCh08G001270	CsGy7G012310	Cucumber (Gy14) v2	cgybcmoB965
CmoCh08G001270	Carg22640	Silver-seed gourd	carcmoB0309
CmoCh08G001270	Carg04949	Silver-seed gourd	carcmoB0119

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmoCh08G001270	CmoCh17G005450	Cucurbita moschata (Rifu)	cmocmoB318

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh08G001270	Melon (DHL92) v3.6.1	cmomedB906
CmoCh08G001270	Cucumber (Chinese Long) v3	cmocucB1043
CmoCh08G001270	Cucumber (Chinese Long) v3	cmocucB1065
CmoCh08G001270	Watermelon (97103) v2	cmowmbB899
CmoCh08G001270	Wax gourd	cmowgoB1088
CmoCh08G001270	Wax gourd	cmowgoB1098
CmoCh08G001270	Wax gourd	cmowgoB1114
CmoCh08G001270	Cucurbita moschata (Rifu)	cmocmoB323
CmoCh08G001270	Cucurbita maxima (Rimu)	cmacmoB378
CmoCh08G001270	Cucurbita maxima (Rimu)	cmacmoB913
CmoCh08G001270	Wild cucumber (PI 183967)	cmocpiB901
CmoCh08G001270	Wild cucumber (PI 183967)	cmocpiB911
CmoCh08G001270	Cucumber (Chinese Long) v2	cmocuB888
CmoCh08G001270	Cucumber (Chinese Long) v2	cmocuB897
CmoCh08G001270	Melon (DHL92) v3.5.1	cmomeB803
CmoCh08G001270	Watermelon (Charleston Gray)	cmowcgB802
CmoCh08G001270	Watermelon (97103) v1	cmowmB864
CmoCh08G001270	Cucurbita pepo (Zucchini)	cmocpeB842
CmoCh08G001270	Bottle gourd (USVL1VR-Ls)	cmolsiB800
CmoCh08G001270	Bottle gourd (USVL1VR-Ls)	cmolsiB822
CmoCh08G001270	Cucumber (Gy14) v2	cgybcmoB430